BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: b3da0ef0b8cc77bff459fbd674d0dd63.SwissProt.fasta
17 sequences; 4,235 total letters
Query= ACIAD1769
Length=233
Score E
Sequences producing significant alignments: (Bits) Value
P0A192 High-affinity branched-chain amino acid transport ATP-bind... 159 4e-52
P0A191 High-affinity branched-chain amino acid transport ATP-bind... 159 4e-52
P22731 High-affinity branched-chain amino acid transport ATP-bind... 154 5e-50
P21630 High-affinity branched-chain amino acid transport ATP-bind... 149 3e-48
Q58664 Probable branched-chain amino acid transport ATP-binding p... 147 2e-47
O28882 Probable branched-chain amino acid transport ATP-binding p... 141 4e-45
P27675 Glutamine transport ATP-binding protein GlnQ [Geobacillus ... 128 5e-40
P10346 Glutamine transport ATP-binding protein GlnQ [Escherichia ... 128 7e-40
A1VZQ5 Probable ABC transporter ATP-binding protein PEB1C [Campyl... 127 1e-39
Q0P9X7 Probable ABC transporter ATP-binding protein PEB1C [Campyl... 127 1e-39
P0A9V4 Lipopolysaccharide export system ATP-binding protein LptB ... 125 6e-39
P0A9V2 Lipopolysaccharide export system ATP-binding protein LptB ... 125 6e-39
P0A9V3 Lipopolysaccharide export system ATP-binding protein LptB ... 125 6e-39
P0A9V1 Lipopolysaccharide export system ATP-binding protein LptB ... 125 6e-39
Q52666 Glutamate/glutamine/aspartate/asparagine transport ATP-bin... 123 7e-38
Q8U4K3 Molybdate/tungstate import ATP-binding protein WtpC [Pyroc... 124 1e-37
P33982 Probable ABC transporter ATP-binding protein AZC_3926 [Azo... 122 3e-37
>P0A192 High-affinity branched-chain amino acid transport ATP-binding
protein LivF [Salmonella typhi]
Length=237
Score = 159 bits (403), Expect = 4e-52
Identities = 91/221 (41%), Positives = 135/221 (61%), Gaps = 1/221 (0%)
Query 1 MLEIKQINQFYGGSHILRDVSLSASIGKCSVILGRNGVGKTTLLKCLMGILPIKSGEILL 60
ML ++++ YG L DVSL + G+ ++G NG GKTTLL L G SG ++
Sbjct 5 MLTFEKVSAHYGKIQALHDVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRASSGRVVF 64
Query 61 DGQNISKMSPEQRVRAGLAYVPQGRDIFSTLTVEENILIGMAKFSGSKAKKVPEELYEIF 120
DG++I+ + +R +A VP+GR +FS +TVEEN+ +G + ++ + +YE+F
Sbjct 65 DGKDITDWQTAKIMREAVAIVPEGRRVFSRMTVEENLAMGGFFAERDRFQERIKWVYELF 124
Query 121 PVLDEMKHRRGGDLSGGQQQQLAIARALASKPRILILDEPTEGIQPSIIKDIGKVIKKLT 180
P L E + +R G +SGG+QQ LAI RAL S+PR+L+LDEP+ G+ P II+ I I++L
Sbjct 125 PRLHERRIQRAGTMSGGEQQMLAIGRALMSQPRLLLLDEPSLGLAPIIIQQIFDTIEQLR 184
Query 181 AQGDMGIILVEQFYDFAEELADTYAVMSRGQVIAQGVGDEM 221
QG M I LVEQ + A +LAD V+ G V+ GD +
Sbjct 185 EQG-MTIFLVEQNANQALKLADRGYVLENGHVVLSDTGDAL 224
>P0A191 High-affinity branched-chain amino acid transport ATP-binding
protein LivF [Salmonella typhimurium (strain LT2 / SGSC1412
/ ATCC 700720)]
Length=237
Score = 159 bits (403), Expect = 4e-52
Identities = 91/221 (41%), Positives = 135/221 (61%), Gaps = 1/221 (0%)
Query 1 MLEIKQINQFYGGSHILRDVSLSASIGKCSVILGRNGVGKTTLLKCLMGILPIKSGEILL 60
ML ++++ YG L DVSL + G+ ++G NG GKTTLL L G SG ++
Sbjct 5 MLTFEKVSAHYGKIQALHDVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRASSGRVVF 64
Query 61 DGQNISKMSPEQRVRAGLAYVPQGRDIFSTLTVEENILIGMAKFSGSKAKKVPEELYEIF 120
DG++I+ + +R +A VP+GR +FS +TVEEN+ +G + ++ + +YE+F
Sbjct 65 DGKDITDWQTAKIMREAVAIVPEGRRVFSRMTVEENLAMGGFFAERDRFQERIKWVYELF 124
Query 121 PVLDEMKHRRGGDLSGGQQQQLAIARALASKPRILILDEPTEGIQPSIIKDIGKVIKKLT 180
P L E + +R G +SGG+QQ LAI RAL S+PR+L+LDEP+ G+ P II+ I I++L
Sbjct 125 PRLHERRIQRAGTMSGGEQQMLAIGRALMSQPRLLLLDEPSLGLAPIIIQQIFDTIEQLR 184
Query 181 AQGDMGIILVEQFYDFAEELADTYAVMSRGQVIAQGVGDEM 221
QG M I LVEQ + A +LAD V+ G V+ GD +
Sbjct 185 EQG-MTIFLVEQNANQALKLADRGYVLENGHVVLSDTGDAL 224
>P22731 High-affinity branched-chain amino acid transport ATP-binding
protein LivF [Escherichia coli (strain K12)]
Length=237
Score = 154 bits (389), Expect = 5e-50
Identities = 90/221 (41%), Positives = 132/221 (60%), Gaps = 1/221 (0%)
Query 1 MLEIKQINQFYGGSHILRDVSLSASIGKCSVILGRNGVGKTTLLKCLMGILPIKSGEILL 60
ML +++ YG L +VSL + G+ ++G NG GKTTLL L G SG I+
Sbjct 5 MLSFDKVSAHYGKIQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIVF 64
Query 61 DGQNISKMSPEQRVRAGLAYVPQGRDIFSTLTVEENILIGMAKFSGSKAKKVPEELYEIF 120
D ++I+ + +R +A VP+GR +FS +TVEEN+ +G + ++ + +YE+F
Sbjct 65 DDKDITDWQTAKIMREAVAIVPEGRRVFSRMTVEENLAMGGFFAERDQFQERIKWVYELF 124
Query 121 PVLDEMKHRRGGDLSGGQQQQLAIARALASKPRILILDEPTEGIQPSIIKDIGKVIKKLT 180
P L E + +R G +SGG+QQ LAI RAL S PR+L+LDEP+ G+ P II+ I I++L
Sbjct 125 PRLHERRIQRAGTMSGGEQQMLAIGRALMSNPRLLLLDEPSLGLAPIIIQQIFDTIEQLR 184
Query 181 AQGDMGIILVEQFYDFAEELADTYAVMSRGQVIAQGVGDEM 221
QG M I LVEQ + A +LAD V+ G V+ GD +
Sbjct 185 EQG-MTIFLVEQNANQALKLADRGYVLENGHVVLSDTGDAL 224
>P21630 High-affinity branched-chain amino acid transport ATP-binding
protein BraG [Pseudomonas aeruginosa (strain ATCC 15692
/ DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C /
PRS 101 / PAO1)]
Length=233
Score = 149 bits (377), Expect = 3e-48
Identities = 83/218 (38%), Positives = 129/218 (59%), Gaps = 1/218 (0%)
Query 1 MLEIKQINQFYGGSHILRDVSLSASIGKCSVILGRNGVGKTTLLKCLMGILPIKSGEILL 60
ML +++ +YG L DVS+ G+ ++G NG GK+TLL L G SG I
Sbjct 1 MLSFDKVSTYYGKIQALHDVSVEVKKGEIVTLIGANGAGKSTLLMTLCGSPQAASGSIRY 60
Query 61 DGQNISKMSPEQRVRAGLAYVPQGRDIFSTLTVEENILIGMAKFSGSKAKKVPEELYEIF 120
+G+ + + +R +A VP+GR +FS LTVEEN+ +G + +++ E+F
Sbjct 61 EGEELVGLPSSTIMRKSIAVVPEGRRVFSRLTVEENLAMGGFFTDKDDYQVQMDKVLELF 120
Query 121 PVLDEMKHRRGGDLSGGQQQQLAIARALASKPRILILDEPTEGIQPSIIKDIGKVIKKLT 180
P L E +R G +SGG+QQ LAI RAL SKP++L+LDEP+ G+ P II+ I ++I++L
Sbjct 121 PRLKERYEQRAGTMSGGEQQMLAIGRALMSKPKLLLLDEPSLGLAPIIIQQIFEIIEQLR 180
Query 181 AQGDMGIILVEQFYDFAEELADTYAVMSRGQVIAQGVG 218
+G + + LVEQ + A +LAD V+ G+++ G
Sbjct 181 REG-VTVFLVEQNANQALKLADRAYVLENGRIVMHDTG 217
>Q58664 Probable branched-chain amino acid transport ATP-binding
protein LivF [Methanocaldococcus jannaschii (strain ATCC
43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)]
Length=237
Score = 147 bits (372), Expect = 2e-47
Identities = 82/221 (37%), Positives = 128/221 (58%), Gaps = 0/221 (0%)
Query 1 MLEIKQINQFYGGSHILRDVSLSASIGKCSVILGRNGVGKTTLLKCLMGILPIKSGEILL 60
M+++K +N YG IL DV+ GK + ++G NG GK+T LK L G+ I SGEI+
Sbjct 1 MIKVKNLNAGYGKLQILFDVNAKIEKGKITTVVGPNGSGKSTFLKTLFGLTKIYSGEIIF 60
Query 61 DGQNISKMSPEQRVRAGLAYVPQGRDIFSTLTVEENILIGMAKFSGSKAKKVPEELYEIF 120
++I+K+ P Q+ R +AY+PQ ++F+ LTVEEN+ I K K+ E +F
Sbjct 61 KDKDIAKVPPHQKARMKIAYLPQTNNVFANLTVEENLKIAGYVLDKDKVKERIEIALSVF 120
Query 121 PVLDEMKHRRGGDLSGGQQQQLAIARALASKPRILILDEPTEGIQPSIIKDIGKVIKKLT 180
P L ++ R+ G LSGGQ+Q LA+ AL +L+LDEPT + P + + I + I ++
Sbjct 121 PELKDILKRKAGTLSGGQRQFLAMGMALVRDAEVLMLDEPTAQLSPKLAEVIFEKIIEMR 180
Query 181 AQGDMGIILVEQFYDFAEELADTYAVMSRGQVIAQGVGDEM 221
+ I+LVEQ A E++D + G+V +G +E+
Sbjct 181 DNFGLTILLVEQNAKRALEISDNGYMFVSGRVAFEGTAEEL 221
>O28882 Probable branched-chain amino acid transport ATP-binding
protein LivF [Archaeoglobus fulgidus (strain ATCC 49558 /
DSM 4304 / JCM 9628 / NBRC 100126 / VC-16)]
Length=236
Score = 141 bits (356), Expect = 4e-45
Identities = 80/223 (36%), Positives = 121/223 (54%), Gaps = 0/223 (0%)
Query 1 MLEIKQINQFYGGSHILRDVSLSASIGKCSVILGRNGVGKTTLLKCLMGILPIKSGEILL 60
ML ++N Y HIL DV + ++G NG GK+TLLK + G+ + SG++ L
Sbjct 1 MLRTVKLNAGYKELHILFDVDADIKKNSITAVVGPNGSGKSTLLKSIFGLATVHSGQVFL 60
Query 61 DGQNISKMSPEQRVRAGLAYVPQGRDIFSTLTVEENILIGMAKFSGSKAKKVPEELYEIF 120
+G I+ + P R + G+AY+PQ ++F+ LTVEEN+ I + K + + F
Sbjct 61 NGGEITSLPPHTRTKLGIAYLPQTDNVFANLTVEENLKIAAYTVDKEEVKDRIDAALDAF 120
Query 121 PVLDEMKHRRGGDLSGGQQQQLAIARALASKPRILILDEPTEGIQPSIIKDIGKVIKKLT 180
P L R+ G LSGG++Q LA+A AL K +L+LDEPT + P + I I KL
Sbjct 121 PELRAFMKRKAGTLSGGERQMLAMATALVRKANVLMLDEPTAQLSPKFAEIIFDRILKLR 180
Query 181 AQGDMGIILVEQFYDFAEELADTYAVMSRGQVIAQGVGDEMPE 223
+ I+LVEQ A E++D ++ G+V G +E+ E
Sbjct 181 DDLKLTILLVEQNVQRALEISDNAYLLVSGRVAFNGTANELLE 223
>P27675 Glutamine transport ATP-binding protein GlnQ [Geobacillus
stearothermophilus]
Length=242
Score = 128 bits (322), Expect = 5e-40
Identities = 73/223 (33%), Positives = 132/223 (59%), Gaps = 4/223 (2%)
Query 1 MLEIKQINQFYGGSHILRDVSLSASIGKCSVILGRNGVGKTTLLKCLMGILPIKSGEILL 60
M+ Q+N++YG H+L+D++L+ G+ VI+G +G GK+TL++C+ + I SGE+++
Sbjct 1 MIYFHQVNKYYGDFHVLKDINLTIHQGEVVVIIGPSGSGKSTLVRCINRLETISSGELIV 60
Query 61 DGQNIS-KMSPEQRVRAGLAYVPQGRDIFSTLTVEENILIGMAKFSGSKAKKVPE-ELYE 118
D ++ K ++R + V Q +++ +TV +NI + K K+ E +Y
Sbjct 61 DNVKVNDKHIDINQLRRNIGMVFQHFNLYPHMTVLQNITLAPMKVLRIPEKEAKETAMYY 120
Query 119 IFPV-LDEMKHRRGGDLSGGQQQQLAIARALASKPRILILDEPTEGIQPSIIKDIGKVIK 177
+ V + + + +LSGGQQQ++AIAR LA KP+I++ DEPT + P I ++ V+K
Sbjct 121 LEKVGIPDKANAYPSELSGGQQQRVAIARGLAMKPKIMLFDEPTSALDPETIGEVLDVMK 180
Query 178 KLTAQGDMGIILVEQFYDFAEELADTYAVMSRGQVIAQGVGDE 220
+L +G M +++V FA E+AD M +G+++ + +E
Sbjct 181 QLAKEG-MTMVVVTHEMGFAREVADRIVFMDQGRILEEAPPEE 222
>P10346 Glutamine transport ATP-binding protein GlnQ [Escherichia
coli (strain K12)]
Length=240
Score = 128 bits (321), Expect = 7e-40
Identities = 70/219 (32%), Positives = 129/219 (59%), Gaps = 4/219 (2%)
Query 1 MLEIKQINQFYGGSHILRDVSLSASIGKCSVILGRNGVGKTTLLKCLMGILPIKSGEILL 60
M+E K +++ +G + +L ++ L+ + G+ VI+G +G GK+TLL+C+ + I SG++++
Sbjct 1 MIEFKNVSKHFGPTQVLHNIDLNIAQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIV 60
Query 61 DGQNISKMSPEQR-VRAGLAYVPQGRDIFSTLTVEENILIGMAKFSGSKAKKVPEELYEI 119
DG ++ ++R +R V Q +F LT EN++ G + G+ ++ + E+
Sbjct 61 DGLKVNDPKVDERLIRQEAGMVFQQFYLFPHLTALENVMFGPLRVRGANKEEAEKLAREL 120
Query 120 FPV--LDEMKHRRGGDLSGGQQQQLAIARALASKPRILILDEPTEGIQPSIIKDIGKVIK 177
L E H +LSGGQQQ++AIARALA KP++++ DEPT + P + ++ KV++
Sbjct 121 LAKVGLAERAHHYPSELSGGQQQRVAIARALAVKPKMMLFDEPTSALDPELRHEVLKVMQ 180
Query 178 KLTAQGDMGIILVEQFYDFAEELADTYAVMSRGQVIAQG 216
L +G M +++V FAE++A + +G++ G
Sbjct 181 DLAEEG-MTMVIVTHEIGFAEKVASRLIFIDKGRIAEDG 218
>A1VZQ5 Probable ABC transporter ATP-binding protein PEB1C [Campylobacter
jejuni subsp. jejuni serotype O:23/36 (strain 81-176)]
Length=242
Score = 127 bits (320), Expect = 1e-39
Identities = 66/222 (30%), Positives = 129/222 (58%), Gaps = 2/222 (1%)
Query 1 MLEIKQINQFYGGSHILRDVSLSASIGKCSVILGRNGVGKTTLLKCLMGILPIKSGEILL 60
M+E+K +N++YG H+L++++LS G+ VI+G +G GK+T ++C+ G+ + SGE+++
Sbjct 1 MIELKNVNKYYGTHHVLKNINLSVKEGEKLVIIGPSGSGKSTTIRCMNGLEEVSSGEVVV 60
Query 61 DGQNISKMSPEQRVRAGLAYVPQGRDIFSTLTVEENILIGMAKFSGSKAKKVPEELYEIF 120
+ ++ + + R A V Q +++ +TV +N+ + K K+ E ++
Sbjct 61 NNLVLNHKNKIEICRKYCAMVFQHFNLYPHMTVLQNLTLAPMKLQKKSKKEAEETAFKYL 120
Query 121 PV--LDEMKHRRGGDLSGGQQQQLAIARALASKPRILILDEPTEGIQPSIIKDIGKVIKK 178
V L + + LSGGQQQ++AIAR+L +K ++ DEPT + P I+++ V+K+
Sbjct 121 KVVGLVDKANVYPATLSGGQQQRVAIARSLCTKKPYILFDEPTSALDPETIQEVLDVMKE 180
Query 179 LTAQGDMGIILVEQFYDFAEELADTYAVMSRGQVIAQGVGDE 220
++ Q + +++V FA+E+AD M G ++ + + E
Sbjct 181 ISHQSNTTMVVVTHEMGFAKEVADRIIFMEDGAIVEENIPSE 222
>Q0P9X7 Probable ABC transporter ATP-binding protein PEB1C [Campylobacter
jejuni subsp. jejuni serotype O:2 (strain ATCC 700819
/ NCTC 11168)]
Length=242
Score = 127 bits (319), Expect = 1e-39
Identities = 66/222 (30%), Positives = 129/222 (58%), Gaps = 2/222 (1%)
Query 1 MLEIKQINQFYGGSHILRDVSLSASIGKCSVILGRNGVGKTTLLKCLMGILPIKSGEILL 60
M+E+K +N++YG H+L++++LS G+ VI+G +G GK+T ++C+ G+ + SGE+++
Sbjct 1 MIELKNVNKYYGTHHVLKNINLSVKEGEKLVIIGPSGSGKSTTIRCMNGLEEVSSGEVVV 60
Query 61 DGQNISKMSPEQRVRAGLAYVPQGRDIFSTLTVEENILIGMAKFSGSKAKKVPEELYEIF 120
+ ++ + + R A V Q +++ +TV +N+ + K K+ E ++
Sbjct 61 NNLVLNHKNKIEICRKYCAMVFQHFNLYPHMTVLQNLTLAPMKLQKKSKKEAEETAFKYL 120
Query 121 PV--LDEMKHRRGGDLSGGQQQQLAIARALASKPRILILDEPTEGIQPSIIKDIGKVIKK 178
V L + + LSGGQQQ++AIAR+L +K ++ DEPT + P I+++ V+K+
Sbjct 121 KVVGLLDKANVYPATLSGGQQQRVAIARSLCTKKPYILFDEPTSALDPETIQEVLDVMKE 180
Query 179 LTAQGDMGIILVEQFYDFAEELADTYAVMSRGQVIAQGVGDE 220
++ Q + +++V FA+E+AD M G ++ + + E
Sbjct 181 ISHQSNTTMVVVTHEMGFAKEVADRIIFMEDGAIVEENIPSE 222
>P0A9V4 Lipopolysaccharide export system ATP-binding protein LptB
[Shigella flexneri]
Length=241
Score = 125 bits (315), Expect = 6e-39
Identities = 71/223 (32%), Positives = 126/223 (57%), Gaps = 5/223 (2%)
Query 2 LEIKQINQFYGGSHILRDVSLSASIGKCSVILGRNGVGKTTLLKCLMGILPIKSGEILLD 61
L K + + Y G ++ DVSL+ + G+ +LG NG GKTT ++GI+P +G I++D
Sbjct 4 LTAKNLAKAYKGRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIID 63
Query 62 GQNISKMSPEQRVRAGLAYVPQGRDIFSTLTVEENILIGMA---KFSGSKAKKVPEELYE 118
+IS + R R G+ Y+PQ IF L+V +N++ + S + + EL E
Sbjct 64 DDDISLLPLHARARRGIGYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQREDRANELME 123
Query 119 IFPVLDEMKHRRGGDLSGGQQQQLAIARALASKPRILILDEPTEGIQPSIIKDIGKVIKK 178
F + + ++ G LSGG+++++ IARALA+ P+ ++LDEP G+ P + DI ++I+
Sbjct 124 EFHI-EHLRDSMGQSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEH 182
Query 179 LTAQGDMGIILVEQFYDFAEELADTYAVMSRGQVIAQGVGDEM 221
L G +G+++ + + + ++S+G +IA G E+
Sbjct 183 LRDSG-LGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEI 224
>P0A9V2 Lipopolysaccharide export system ATP-binding protein LptB
[Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)]
Length=241
Score = 125 bits (315), Expect = 6e-39
Identities = 71/223 (32%), Positives = 126/223 (57%), Gaps = 5/223 (2%)
Query 2 LEIKQINQFYGGSHILRDVSLSASIGKCSVILGRNGVGKTTLLKCLMGILPIKSGEILLD 61
L K + + Y G ++ DVSL+ + G+ +LG NG GKTT ++GI+P +G I++D
Sbjct 4 LTAKNLAKAYKGRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIID 63
Query 62 GQNISKMSPEQRVRAGLAYVPQGRDIFSTLTVEENILIGMA---KFSGSKAKKVPEELYE 118
+IS + R R G+ Y+PQ IF L+V +N++ + S + + EL E
Sbjct 64 DDDISLLPLHARARRGIGYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQREDRANELME 123
Query 119 IFPVLDEMKHRRGGDLSGGQQQQLAIARALASKPRILILDEPTEGIQPSIIKDIGKVIKK 178
F + + ++ G LSGG+++++ IARALA+ P+ ++LDEP G+ P + DI ++I+
Sbjct 124 EFHI-EHLRDSMGQSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEH 182
Query 179 LTAQGDMGIILVEQFYDFAEELADTYAVMSRGQVIAQGVGDEM 221
L G +G+++ + + + ++S+G +IA G E+
Sbjct 183 LRDSG-LGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEI 224
>P0A9V3 Lipopolysaccharide export system ATP-binding protein LptB
[Escherichia coli O157:H7]
Length=241
Score = 125 bits (315), Expect = 6e-39
Identities = 71/223 (32%), Positives = 126/223 (57%), Gaps = 5/223 (2%)
Query 2 LEIKQINQFYGGSHILRDVSLSASIGKCSVILGRNGVGKTTLLKCLMGILPIKSGEILLD 61
L K + + Y G ++ DVSL+ + G+ +LG NG GKTT ++GI+P +G I++D
Sbjct 4 LTAKNLAKAYKGRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIID 63
Query 62 GQNISKMSPEQRVRAGLAYVPQGRDIFSTLTVEENILIGMA---KFSGSKAKKVPEELYE 118
+IS + R R G+ Y+PQ IF L+V +N++ + S + + EL E
Sbjct 64 DDDISLLPLHARARRGIGYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQREDRANELME 123
Query 119 IFPVLDEMKHRRGGDLSGGQQQQLAIARALASKPRILILDEPTEGIQPSIIKDIGKVIKK 178
F + + ++ G LSGG+++++ IARALA+ P+ ++LDEP G+ P + DI ++I+
Sbjct 124 EFHI-EHLRDSMGQSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEH 182
Query 179 LTAQGDMGIILVEQFYDFAEELADTYAVMSRGQVIAQGVGDEM 221
L G +G+++ + + + ++S+G +IA G E+
Sbjct 183 LRDSG-LGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEI 224
>P0A9V1 Lipopolysaccharide export system ATP-binding protein LptB
[Escherichia coli (strain K12)]
Length=241
Score = 125 bits (315), Expect = 6e-39
Identities = 71/223 (32%), Positives = 126/223 (57%), Gaps = 5/223 (2%)
Query 2 LEIKQINQFYGGSHILRDVSLSASIGKCSVILGRNGVGKTTLLKCLMGILPIKSGEILLD 61
L K + + Y G ++ DVSL+ + G+ +LG NG GKTT ++GI+P +G I++D
Sbjct 4 LTAKNLAKAYKGRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIID 63
Query 62 GQNISKMSPEQRVRAGLAYVPQGRDIFSTLTVEENILIGMA---KFSGSKAKKVPEELYE 118
+IS + R R G+ Y+PQ IF L+V +N++ + S + + EL E
Sbjct 64 DDDISLLPLHARARRGIGYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQREDRANELME 123
Query 119 IFPVLDEMKHRRGGDLSGGQQQQLAIARALASKPRILILDEPTEGIQPSIIKDIGKVIKK 178
F + + ++ G LSGG+++++ IARALA+ P+ ++LDEP G+ P + DI ++I+
Sbjct 124 EFHI-EHLRDSMGQSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEH 182
Query 179 LTAQGDMGIILVEQFYDFAEELADTYAVMSRGQVIAQGVGDEM 221
L G +G+++ + + + ++S+G +IA G E+
Sbjct 183 LRDSG-LGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEI 224
>Q52666 Glutamate/glutamine/aspartate/asparagine transport ATP-binding
protein BztD [Rhodobacter capsulatus (strain ATCC BAA-309
/ NBRC 16581 / SB1003)]
Length=263
Score = 123 bits (309), Expect = 7e-38
Identities = 72/217 (33%), Positives = 130/217 (60%), Gaps = 4/217 (2%)
Query 2 LEIKQINQFYGGSHILRDVSLSASIGKCSVILGRNGVGKTTLLKCLMGILPIKSGEILLD 61
++I Q+N++YG H+LRD++L+ G+ VI G +G GK+T+++C+ + +SG+I++D
Sbjct 23 IQISQMNKWYGQFHVLRDINLTVHRGERIVIAGPSGSGKSTMIRCINRLEEHQSGKIIVD 82
Query 62 GQNI-SKMSPEQRVRAGLAYVPQGRDIFSTLTVEENILIGMAKFSGSKAKKVPEE-LYEI 119
G + S + +VR+ + V Q ++F LT+ EN+ + ++ E +Y +
Sbjct 83 GIELTSDLKNIDKVRSEVGMVFQHFNLFPHLTILENLTLAPIWVRKVPKREAEETAMYYL 142
Query 120 FPV-LDEMKHRRGGDLSGGQQQQLAIARALASKPRILILDEPTEGIQPSIIKDIGKVIKK 178
V + E + G LSGGQQQ++AIAR+L KP+I++ DEPT + P +IK++ + +
Sbjct 143 EKVKIPEQAQKYPGQLSGGQQQRVAIARSLCMKPKIMLFDEPTSALDPEMIKEVLDTMIQ 202
Query 179 LTAQGDMGIILVEQFYDFAEELADTYAVMSRGQVIAQ 215
L +G M ++ V FA+ +A+ M+ GQ++ Q
Sbjct 203 LAEEG-MTMLCVAHEMGFAQAVANRVIFMADGQIVEQ 238
>Q8U4K3 Molybdate/tungstate import ATP-binding protein WtpC [Pyrococcus
furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422
/ Vc1)]
Length=344
Score = 124 bits (312), Expect = 1e-37
Identities = 79/233 (34%), Positives = 132/233 (57%), Gaps = 7/233 (3%)
Query 1 MLEIKQINQFYGGSHILRDVSLSASIGKCSVILGRNGVGKTTLLKCLMGILPIKSGEILL 60
MLE++ I++ + H L+D+S S G+ ++LG +G GKT LL+ + GI+P G++LL
Sbjct 1 MLEVQGISKKWKDFH-LKDISFSVMDGEYFIVLGPSGAGKTVLLEIIAGIIPPDGGKVLL 59
Query 61 DGQNISKMSPEQRVRAGLAYVPQGRDIFSTLTVEENILIGMAKFSGSKAKKVPEELYEIF 120
DG++I+ + PE+R G+AYVPQ +F ++V +NI G+ K ++ + + EI
Sbjct 60 DGKDITLLPPEKR---GIAYVPQNYALFPNMSVFDNIAFGL-KVRRVPRSEIEKRVLEIS 115
Query 121 PVLD--EMKHRRGGDLSGGQQQQLAIARALASKPRILILDEPTEGIQPSIIKDIGKVIKK 178
VL + HR+ LSGG+QQ++A+ARAL +P I++LDEP + I + +K+
Sbjct 116 EVLGIRHLLHRKPRTLSGGEQQRVAVARALVIEPEIILLDEPFANLDVQIRSRLINEMKR 175
Query 179 LTAQGDMGIILVEQFYDFAEELADTYAVMSRGQVIAQGVGDEMPEKGIKELVA 231
+ I V ++ A L D +M G+++ G E+ + E VA
Sbjct 176 WRRELGFTAIHVTHSFEEALALGDRVGIMLNGKLVQVGEIREVFSRPNSEEVA 228
>P33982 Probable ABC transporter ATP-binding protein AZC_3926
[Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM
20966 / LMG 6465 / NBRC 14845 / NCIMB 13405 / ORS 571)]
Length=281
Score = 122 bits (306), Expect = 3e-37
Identities = 76/211 (36%), Positives = 120/211 (57%), Gaps = 10/211 (5%)
Query 11 YGGSHILRDVSLSASIGKCSVILGRNGVGKTTLLKCLMGILPIKSGEILLDGQNISKMSP 70
YGG ++RDVSL G+ +LG NG GKTT+ + G++ G I LDG +++ M
Sbjct 54 YGGRKVVRDVSLDVRRGEAVGLLGPNGAGKTTVFYMITGLVKADQGRIELDGHDVTPMPM 113
Query 71 EQRVRAGLAYVPQGRDIFSTLTVEENILIGMAKFSGSKAKKVPEELYEIFPVLDEMK--H 128
+R R G+ Y+PQ IF L+VE+NI + + + K+ EEL + L+E K H
Sbjct 114 YRRARLGIGYLPQEASIFRGLSVEDNI-GAVLEITEPNRKRRAEELDAL---LEEFKITH 169
Query 129 RRGGD---LSGGQQQQLAIARALASKPRILILDEPTEGIQPSIIKDIGKVIKKLTAQGDM 185
R LSGG+++++ IARALAS+P ++LDEP GI P + DI +++ LT +G +
Sbjct 170 VRKSPSIALSGGERRRVEIARALASRPAFMLLDEPFAGIDPIAVGDIQALVRHLTTRG-I 228
Query 186 GIILVEQFYDFAEELADTYAVMSRGQVIAQG 216
G+++ + L D ++ G V+ +G
Sbjct 229 GVLITDHNVRETLGLIDRAYIIHSGTVLMEG 259
Lambda K H a alpha
0.321 0.140 0.390 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 672511
Database: b3da0ef0b8cc77bff459fbd674d0dd63.SwissProt.fasta
Posted date: May 20, 2024 5:06 AM
Number of letters in database: 4,235
Number of sequences in database: 17
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
