BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 4593a34c929a2ea527d05d0094376f71.TrEMBL.fasta
5 sequences; 1,765 total letters
Query= ACIAD1771
Length=108
Score E
Sequences producing significant alignments: (Bits) Value
Q6FBF2 Uncharacterized protein [Acinetobacter baylyi (strain ATCC... 222 6e-81
A0A7G2SGF2 Uncharacterized protein [Acinetobacter sp] 222 6e-81
A0A7V3YM29 Phosphoribosylaminoimidazolecarboxamide formyltransfer... 42.0 2e-09
A0A7V4DER9 Phosphoribosylaminoimidazolecarboxamide formyltransfer... 41.2 4e-09
A0A7V4TJE8 Phosphoribosylaminoimidazolecarboxamide formyltransfer... 39.3 2e-08
>Q6FBF2 Uncharacterized protein [Acinetobacter baylyi (strain
ATCC 33305 / BD413 / ADP1)]
Length=107
Score = 222 bits (565), Expect = 6e-81
Identities = 107/107 (100%), Positives = 107/107 (100%), Gaps = 0/107 (0%)
Query 1 MALDYQISQAYNIVSQEHYQDNIRNIHRFIEELEISRASSLFGNLVMKSIGEYICIHSPC 60
MALDYQISQAYNIVSQEHYQDNIRNIHRFIEELEISRASSLFGNLVMKSIGEYICIHSPC
Sbjct 1 MALDYQISQAYNIVSQEHYQDNIRNIHRFIEELEISRASSLFGNLVMKSIGEYICIHSPC 60
Query 61 NSHELLIDLKEAPDFFYQEKFLRWAVETCVFIHHSFEIDLPAKKILG 107
NSHELLIDLKEAPDFFYQEKFLRWAVETCVFIHHSFEIDLPAKKILG
Sbjct 61 NSHELLIDLKEAPDFFYQEKFLRWAVETCVFIHHSFEIDLPAKKILG 107
>A0A7G2SGF2 Uncharacterized protein [Acinetobacter sp]
Length=107
Score = 222 bits (565), Expect = 6e-81
Identities = 107/107 (100%), Positives = 107/107 (100%), Gaps = 0/107 (0%)
Query 1 MALDYQISQAYNIVSQEHYQDNIRNIHRFIEELEISRASSLFGNLVMKSIGEYICIHSPC 60
MALDYQISQAYNIVSQEHYQDNIRNIHRFIEELEISRASSLFGNLVMKSIGEYICIHSPC
Sbjct 1 MALDYQISQAYNIVSQEHYQDNIRNIHRFIEELEISRASSLFGNLVMKSIGEYICIHSPC 60
Query 61 NSHELLIDLKEAPDFFYQEKFLRWAVETCVFIHHSFEIDLPAKKILG 107
NSHELLIDLKEAPDFFYQEKFLRWAVETCVFIHHSFEIDLPAKKILG
Sbjct 61 NSHELLIDLKEAPDFFYQEKFLRWAVETCVFIHHSFEIDLPAKKILG 107
>A0A7V3YM29 Phosphoribosylaminoimidazolecarboxamide formyltransferase
/ IMP cyclohydrolase [Candidatus Caldatribacterium californiense]
Length=517
Score = 42.0 bits (97), Expect = 2e-09
Identities = 21/72 (29%), Positives = 40/72 (56%), Gaps = 2/72 (3%)
Query 16 QEHYQDNIRNIHRFIEELEISRASSLFGNLVMKSIGEYICIHSPCNSHELLIDLKEAPDF 75
++ ++ +N+ +EE++I + L K+ +C+ SP ELL +L+E +
Sbjct 108 EKKVKEGEQNLEVLVEEIDIGGVTLL--RAAAKNWKHVVCVSSPSQYPELLAELEEHNGY 165
Query 76 FYQEKFLRWAVE 87
F +EK L+WA+E
Sbjct 166 FPEEKSLQWAIE 177
>A0A7V4DER9 Phosphoribosylaminoimidazolecarboxamide formyltransferase
/ IMP cyclohydrolase [Candidatus Caldatribacterium californiense]
Length=517
Score = 41.2 bits (95), Expect = 4e-09
Identities = 20/72 (28%), Positives = 40/72 (56%), Gaps = 2/72 (3%)
Query 16 QEHYQDNIRNIHRFIEELEISRASSLFGNLVMKSIGEYICIHSPCNSHELLIDLKEAPDF 75
++ ++ +N+ +EE++I + L K+ +C+ SP ELL +L++ +
Sbjct 108 EKKVKEGEQNLEALVEEIDIGGVTLL--RAAAKNWQHVVCVFSPSQYPELLAELEKHNGY 165
Query 76 FYQEKFLRWAVE 87
F +EK L+WA+E
Sbjct 166 FPEEKSLQWAIE 177
>A0A7V4TJE8 Phosphoribosylaminoimidazolecarboxamide formyltransferase
/ IMP cyclohydrolase [Candidatus Caldatribacterium saccharofermentans]
Length=517
Score = 39.3 bits (90), Expect = 2e-08
Identities = 20/72 (28%), Positives = 40/72 (56%), Gaps = 2/72 (3%)
Query 16 QEHYQDNIRNIHRFIEELEISRASSLFGNLVMKSIGEYICIHSPCNSHELLIDLKEAPDF 75
++ ++ +N+ +EE++I + L K+ +C+ SP ELL +L++ +
Sbjct 108 EKKVKEGEQNLDVLVEEIDIGGVTLL--RAAAKNWKHVVCVSSPSQYPELLEELEKHNGY 165
Query 76 FYQEKFLRWAVE 87
F +EK L+WA+E
Sbjct 166 FPEEKSLQWAIE 177
Lambda K H a alpha
0.330 0.143 0.443 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 125970
Database: 4593a34c929a2ea527d05d0094376f71.TrEMBL.fasta
Posted date: May 20, 2024 12:46 AM
Number of letters in database: 1,765
Number of sequences in database: 5
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40