BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: 19d407eab2829e874154882b302f0e2f.SwissProt.fasta
           1 sequences; 161 total letters



Query= ACIAD1855

Length=90
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

Q5E1R4 N5-carboxyaminoimidazole ribonucleotide mutase [Aliivibrio...  31.2    6e-07


>Q5E1R4 N5-carboxyaminoimidazole ribonucleotide mutase [Aliivibrio 
fischeri (strain ATCC 700601 / ES114)]
Length=161

 Score = 31.2 bits (69),  Expect = 6e-07
 Identities = 23/53 (43%), Positives = 27/53 (51%), Gaps = 13/53 (25%)

Query  29   AAVTSVAVLG----ATAAKAADG---------DVDIGTLAIGGLGAAAAGVFA  68
            AA TSV VLG    + A K  D           + +GTLAIG  GAA AG+ A
Sbjct  74   AAFTSVPVLGVPVQSRALKGMDSLLSIVQMPKGIAVGTLAIGEAGAANAGILA  126



Lambda      K        H        a         alpha
   0.324    0.135    0.391    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 11396


  Database: 19d407eab2829e874154882b302f0e2f.SwissProt.fasta
    Posted date:  May 30, 2024  12:52 PM
  Number of letters in database: 161
  Number of sequences in database:  1



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40