BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: f8bc4efb9c2c772d0d7f71d6ea83a769.SwissProt.fasta
11 sequences; 6,003 total letters
Query= ACIAD1914
Length=344
Score E
Sequences producing significant alignments: (Bits) Value
Q55462 Bicarbonate transport ATP-binding protein CmpC [Synechocys... 158 1e-46
Q5MZ54 Bicarbonate transport ATP-binding protein CmpC [Synechococ... 155 9e-46
Q55107 Bicarbonate transport ATP-binding protein CmpC [Synechococ... 155 9e-46
P73450 Nitrate import ATP-binding protein NrtC [Synechocystis sp.... 147 1e-42
Q44292 Nitrate/nitrite binding protein NrtA [Nostoc sp. (strain P... 126 3e-36
P38043 Nitrate/nitrite binding protein NrtA [Synechococcus elonga... 112 5e-31
Q5MZ56 Bicarbonate-binding protein CmpA [Synechococcus sp. (strai... 103 5e-28
P39660 Bicarbonate-binding protein CmpA [Synechococcus elongatus ... 103 5e-28
P73452 Nitrate/nitrite binding protein NrtA [Synechocystis sp. (s... 99.8 1e-26
P38045 Nitrate import ATP-binding protein NrtC [Synechococcus elo... 100 2e-26
Q55460 Bicarbonate-binding protein CmpA [Synechocystis sp. (strai... 83.6 5e-21
>Q55462 Bicarbonate transport ATP-binding protein CmpC [Synechocystis
sp. (strain PCC 6803 / Kazusa)]
Length=667
Score = 158 bits (400), Expect = 1e-46
Identities = 107/334 (32%), Positives = 171/334 (51%), Gaps = 20/334 (6%)
Query 4 IEKKQLQLGYIPLLDCIALLWAKERGYFEEMGLD-VTLVKEASWASLRDRLAFGILDAAH 62
+EK L+LGY+PL+ C L+ A+E+G+F + GLD V+LV+E SW + D +A G LD A
Sbjct 276 LEKVNLELGYVPLVACAPLVVAQEKGFFAKHGLDEVSLVRETSWRGIVDGIAGGYLDGAQ 335
Query 63 CLSAMLPA--AAIGEDQIGIPLKTPLVLSKNRAYISLSQKLCYELSIQNADNAQENSAKL 120
+ A +P A G + IP+ + L +++N I+LS+KL Y+ I A++ ++
Sbjct 336 -MPAGMPTWLTAGGYREQSIPVVSALTMTRNGNAITLSKKL-YDQGIYTAEDFRQ----- 388
Query 121 VKYLEQEQSIALAHVFHHSIHHYCLREWLALSHLDLAKAIQLKTLPPPYMLDALASASID 180
+ L V S+H+ LR WLA +++ + + LKT+PP M+ L + +ID
Sbjct 389 LLLASDGDRHTLGMVHPSSMHNLLLRYWLAAHNINPDRDVHLKTIPPAQMVADLKAGTID 448
Query 181 GFCVGEPWNTQGEIEGYSQIVASSRDIIPEVADKVLAVTEEWAAHHPNTVIALTAAILKA 240
G+CV EPWN + +EG +A+ +I KVL V E+WA HPNT +AL A+L+A
Sbjct 449 GYCVSEPWNLRASMEGAGFSIATDLEIWQNHPGKVLGVREDWAIAHPNTHVALVKALLEA 508
Query 241 -------QQELETLSNLEPVWQILINFNIVRFQCSKSVHVKSYHALEQIIRHLVVGQA-- 291
E+E L + N + + + + + +E HL G
Sbjct 509 CAYCADPNHEMEIRELLATRQYLSTNIDYIHLGDPEGRTCRLGNPVE-YSHHLFFGDQFN 567
Query 292 APCSEDMLWLFGQMQKWHDLTIETTALNELSQRC 325
P + LW+ QM +W D+ + L + C
Sbjct 568 RPSRTEHLWMMTQMARWGDIPFPRNWVEILERVC 601
>Q5MZ54 Bicarbonate transport ATP-binding protein CmpC [Synechococcus
sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1)]
Length=663
Score = 155 bits (393), Expect = 9e-46
Identities = 103/328 (31%), Positives = 171/328 (52%), Gaps = 14/328 (4%)
Query 4 IEKKQLQLGYIPLLDCIALLWAKERGYFEEMGLD-VTLVKEASWASLRDRLAFGILDAAH 62
+EK L++GY+PL+ C L+ A+E+ +F + GLD V+LV+E SW + D L LDAA
Sbjct 276 LEKVNLEIGYVPLMACAPLVVAQEKAFFAKHGLDEVSLVRETSWRGIVDGLTENYLDAAQ 335
Query 63 CLSAMLPAAAIG-EDQIGIPLKTPLVLSKNRAYISLSQKLCYELSIQNADNAQENSAKLV 121
+ M ++G + +P+ + L +S+N I+LS+ L Y+ IQ D+ + L+
Sbjct 336 MPAGMPVWMSVGGQGGSPLPIVSSLTMSRNGNGITLSKAL-YDEGIQTVDDFRN----LL 390
Query 122 KYLEQEQSIALAHVFHHSIHHYCLREWLALSHLDLAKAIQLKTLPPPYMLDALASASIDG 181
+ +Q I + V S+H+ LR WLA + +D + +QL+T+PP M+ L +IDG
Sbjct 391 RSTADKQHI-MGIVHPASMHNLLLRYWLAANQIDPDRDVQLRTIPPAQMVADLKDGTIDG 449
Query 182 FCVGEPWNTQGEIEGYSQIVASSRDIIPEVADKVLAVTEEWAAHHPNTVIALTAAILKAQ 241
+C+GEPWN + +AS +I KVL V E+WA +PN+ +AL A+L+A
Sbjct 450 YCIGEPWNAWAAQKEIGFTIASDLEIWNGHPGKVLGVREDWANRYPNSHVALVKALLEAC 509
Query 242 QELETLSNLEPVWQILINFNIVRFQCSKSVHVKSYHALEQII----RHLVVGQAAPCSED 297
Q E +N + + ++L + + C K S + + R G P +
Sbjct 510 QYCEDPANWDELRELLSDRRYL--SCPKEYIQFSQSTADDLAVPHHRFAGAGVNRPSRTE 567
Query 298 MLWLFGQMQKWHDLTIETTALNELSQRC 325
LW+ Q+ +W D+ + L + C
Sbjct 568 HLWMMTQLARWGDVPFPRNWVEILERVC 595
>Q55107 Bicarbonate transport ATP-binding protein CmpC [Synechococcus
elongatus (strain ATCC 33912 / PCC 7942 / FACHB-805)]
Length=663
Score = 155 bits (393), Expect = 9e-46
Identities = 103/328 (31%), Positives = 171/328 (52%), Gaps = 14/328 (4%)
Query 4 IEKKQLQLGYIPLLDCIALLWAKERGYFEEMGLD-VTLVKEASWASLRDRLAFGILDAAH 62
+EK L++GY+PL+ C L+ A+E+ +F + GLD V+LV+E SW + D L LDAA
Sbjct 276 LEKVNLEIGYVPLMACAPLVVAQEKAFFAKHGLDEVSLVRETSWRGIVDGLTENYLDAAQ 335
Query 63 CLSAMLPAAAIG-EDQIGIPLKTPLVLSKNRAYISLSQKLCYELSIQNADNAQENSAKLV 121
+ M ++G + +P+ + L +S+N I+LS+ L Y+ IQ D+ + L+
Sbjct 336 MPAGMPVWMSVGGQGGSPLPIVSSLTMSRNGNGITLSKAL-YDEGIQTVDDFRN----LL 390
Query 122 KYLEQEQSIALAHVFHHSIHHYCLREWLALSHLDLAKAIQLKTLPPPYMLDALASASIDG 181
+ +Q I + V S+H+ LR WLA + +D + +QL+T+PP M+ L +IDG
Sbjct 391 RSTADKQHI-MGIVHPASMHNLLLRYWLAANQIDPDRDVQLRTIPPAQMVADLKDGTIDG 449
Query 182 FCVGEPWNTQGEIEGYSQIVASSRDIIPEVADKVLAVTEEWAAHHPNTVIALTAAILKAQ 241
+C+GEPWN + +AS +I KVL V E+WA +PN+ +AL A+L+A
Sbjct 450 YCIGEPWNAWAAQKEIGFTIASDLEIWNGHPGKVLGVREDWANRYPNSHVALVKALLEAC 509
Query 242 QELETLSNLEPVWQILINFNIVRFQCSKSVHVKSYHALEQII----RHLVVGQAAPCSED 297
Q E +N + + ++L + + C K S + + R G P +
Sbjct 510 QYCEDPANWDELRELLSDRRYL--SCPKEYIQFSQSTADDLAVPHHRFAGAGVNRPSRTE 567
Query 298 MLWLFGQMQKWHDLTIETTALNELSQRC 325
LW+ Q+ +W D+ + L + C
Sbjct 568 HLWMMTQLARWGDVPFPRNWVEILERVC 595
>P73450 Nitrate import ATP-binding protein NrtC [Synechocystis
sp. (strain PCC 6803 / Kazusa)]
Length=670
Score = 147 bits (371), Expect = 1e-42
Identities = 88/239 (37%), Positives = 138/239 (58%), Gaps = 8/239 (3%)
Query 4 IEKKQLQLGYIPLLDCIALLWAKERGYFEEMGLD-VTLVKEASWASLRDRLAFGILDAAH 62
+EK L LG+IPL DC L+ AKE+G+F++ GL+ V LVKE SW ++ D + LD A
Sbjct 278 LEKINLDLGFIPLTDCAPLVVAKEKGFFQKHGLEQVNLVKEPSWQAIADGIRERRLDGAQ 337
Query 63 CLSAMLPAAAIGED-QIGIPLKTPLVLSKNRAYISLSQKLCYELSIQNADNAQENSAKLV 121
++ M A +G + +P+ T +V+S+N I+LS+K E ++ ++ + KL
Sbjct 338 MVAGMPLALTLGMGGKTPLPMVTAMVMSRNGNAITLSKKFA-EAGVKTLEDLR---LKLA 393
Query 122 KYLEQEQSIALAHVFHHSIHHYCLREWLALSHLDLAKAIQLKTLPPPYMLDALASASIDG 181
+ +Q ++ + H S+ + LR WLA +D + I L LPPP M+ L + +IDG
Sbjct 394 ETPDQVSTLGMVHPA--SMQNLLLRYWLASGSIDPDQDINLMRLPPPQMVSNLEAGNIDG 451
Query 182 FCVGEPWNTQGEIEGYSQIVASSRDIIPEVADKVLAVTEEWAAHHPNTVIALTAAILKA 240
FCVGEPWN+ + ++A+ DI +KVL + EEW +P T +AL A+L+A
Sbjct 452 FCVGEPWNSYAVKQNLGYVIATDLDIWNGHPEKVLGMREEWVNKYPATHLALVKALLEA 510
>Q44292 Nitrate/nitrite binding protein NrtA [Nostoc sp. (strain
PCC 7120 / SAG 25.82 / UTEX 2576)]
Length=440
Score = 126 bits (317), Expect = 3e-36
Identities = 79/261 (30%), Positives = 140/261 (54%), Gaps = 15/261 (6%)
Query 3 QIEKKQLQLGYIPLLDCIALLWAKERGYFEEMGL-DVTLVKEASWASLRDRLAFGI---- 57
++E + +LG+IPL D L+ AKE+G+F + G+ D+ ++K+ SW RD L G
Sbjct 56 KVETTKAKLGFIPLTDAAPLIIAKEKGFFAKYGMTDIEVIKQKSWPVTRDNLKIGSSGGG 115
Query 58 LDAAHCLSAMLPAAAIGEDQIGIPLKTPLVLSKNRAYISLSQKLCYELSIQNADNAQENS 117
+D AH LS M I + +P+ L+ N IS+++K EL++ + +++
Sbjct 116 IDGAHILSPMPYLMTINDK---VPMYILARLNTNGQAISVAEKF-KELNVNLESKSLKDA 171
Query 118 AKLVKYLEQEQSIALAHVFHHSIHHYCLREWLALSHLDLAKAIQLKTLPPPYMLDALASA 177
A +K ++++ + F H +R WLA ++ + + L+ +PPP M+ +
Sbjct 172 A--IKAKADKKALKMGITFPGGTHDLWMRYWLAAGGINPDQDVVLEAVPPPQMVANMKVN 229
Query 178 SIDGFCVGEPWNTQ--GEIEGYSQIVASSRDIIPEVADKVLAVTEEWAAHHPNTVIALTA 235
++DGFCVGEPWN Q + GYS +V ++ + +K ++ ++W +PN A+
Sbjct 230 TVDGFCVGEPWNAQLVNQKIGYSALVTG--ELWKDHPEKAFSMRQDWIEQNPNAAQAILM 287
Query 236 AILKAQQELETLSNLEPVWQI 256
AIL+AQQ + N E + +I
Sbjct 288 AILEAQQWCDKAENKEEMCKI 308
>P38043 Nitrate/nitrite binding protein NrtA [Synechococcus elongatus
(strain ATCC 33912 / PCC 7942 / FACHB-805)]
Length=443
Score = 112 bits (280), Expect = 5e-31
Identities = 82/264 (31%), Positives = 126/264 (48%), Gaps = 19/264 (7%)
Query 5 EKKQLQLGYIPLLDCIALLWAKERGYFEEMGL-DVTLVKEASWASLRDRLAFGI----LD 59
E K + LG+I L D ++ A E+G F + GL D +VK+ SWA RD L G +D
Sbjct 54 EVKGVTLGFIALTDAAPVIIALEKGLFAKYGLPDTKVVKQTSWAVTRDNLELGSDRGGID 113
Query 60 AAHCLSAM---LPAAAIGEDQIGIPLKTPLVLSKNRAYISLSQKLCYELSIQNADNAQEN 116
AH LS M L A I + Q +P+ L+ ISLS + A+ Q
Sbjct 114 GAHILSPMPYLLTAGTITKSQKPLPMYILARLNTQGQGISLSNEFL-------AEKVQIK 166
Query 117 SAKLVKYLEQEQS----IALAHVFHHSIHHYCLREWLALSHLDLAKAIQLKTLPPPYMLD 172
KL +Q+++ + A F H +R WLA + +D L +PPP M+
Sbjct 167 DPKLKAIADQKKASGKLLKAAVTFPGGTHDLWMRYWLAANGIDPNNDADLVVIPPPQMVA 226
Query 173 ALASASIDGFCVGEPWNTQGEIEGYSQIVASSRDIIPEVADKVLAVTEEWAAHHPNTVIA 232
+ + ++D FCVGEPWN + + A + ++ +K L + +WA +P +A
Sbjct 227 NMQTGTMDTFCVGEPWNARLVNKKLGYTAAVTGELWKFHPEKALTIRADWADKNPKATMA 286
Query 233 LTAAILKAQQELETLSNLEPVWQI 256
L A+ +AQ E +NL+ + QI
Sbjct 287 LLKAVQEAQIWCEDPANLDELCQI 310
>Q5MZ56 Bicarbonate-binding protein CmpA [Synechococcus sp. (strain
ATCC 27144 / PCC 6301 / SAUG 1402/1)]
Length=450
Score = 103 bits (258), Expect = 5e-28
Identities = 73/269 (27%), Positives = 131/269 (49%), Gaps = 14/269 (5%)
Query 2 SQIEKKQLQLGYIPLLDCIALLWAKERGYFEEMGLDVTLVKEASWASLRDRLAFGI---- 57
S +E K ++LGYIP+ + L+ +E+G+F + GLDV + K+ASWA+ RD + G
Sbjct 52 SDLEVKTIKLGYIPIFEAAPLIIGREKGFFAKYGLDVEVSKQASWAAARDNVILGSAGGG 111
Query 58 LDAAHC---LSAMLPAAAIGEDQIGIPLKTPLVLSKNRAYISLSQKL-CYELSIQNADNA 113
+D + A+L AI Q +P+ LS I++S +L L ++ A N
Sbjct 112 IDGGQWQMPMPALLTEGAISNGQ-KVPMYVLACLSTQGNGIAVSNQLKAQNLGLKLAPNR 170
Query 114 QENSAKLVKYLEQE-QSIALAHVFHHSIHHYCLREWLALSHLDLAKAIQLKTLPPPYMLD 172
++ Y + + ++ F ++ + +R W A +D K I+L T+P L
Sbjct 171 DF----ILNYPQTSGRKFKASYTFPNANQDFWIRYWFAAGGIDPDKDIELLTVPSAETLQ 226
Query 173 ALASASIDGFCVGEPWNTQGEIEGYSQIVASSRDIIPEVADKVLAVTEEWAAHHPNTVIA 232
+ + +ID F G+PW ++ + A + + P ++ LA+ +W HP +A
Sbjct 227 NMRNGTIDCFSTGDPWPSRIAKDDVGYQAALTGQMWPYHPEEFLALRADWVDKHPKATLA 286
Query 233 LTAAILKAQQELETLSNLEPVWQILINFN 261
L +++AQQ + +N + +IL N
Sbjct 287 LLMGLMEAQQWCDQKANRAEMAKILSGRN 315
>P39660 Bicarbonate-binding protein CmpA [Synechococcus elongatus
(strain ATCC 33912 / PCC 7942 / FACHB-805)]
Length=450
Score = 103 bits (258), Expect = 5e-28
Identities = 73/269 (27%), Positives = 131/269 (49%), Gaps = 14/269 (5%)
Query 2 SQIEKKQLQLGYIPLLDCIALLWAKERGYFEEMGLDVTLVKEASWASLRDRLAFGI---- 57
S +E K ++LGYIP+ + L+ +E+G+F + GLDV + K+ASWA+ RD + G
Sbjct 52 SDLEVKTIKLGYIPIFEAAPLIIGREKGFFAKYGLDVEVSKQASWAAARDNVILGSAGGG 111
Query 58 LDAAHC---LSAMLPAAAIGEDQIGIPLKTPLVLSKNRAYISLSQKL-CYELSIQNADNA 113
+D + A+L AI Q +P+ LS I++S +L L ++ A N
Sbjct 112 IDGGQWQMPMPALLTEGAISNGQ-KVPMYVLACLSTQGNGIAVSNQLKAQNLGLKLAPNR 170
Query 114 QENSAKLVKYLEQE-QSIALAHVFHHSIHHYCLREWLALSHLDLAKAIQLKTLPPPYMLD 172
++ Y + + ++ F ++ + +R W A +D K I+L T+P L
Sbjct 171 DF----ILNYPQTSGRKFKASYTFPNANQDFWIRYWFAAGGIDPDKDIELLTVPSAETLQ 226
Query 173 ALASASIDGFCVGEPWNTQGEIEGYSQIVASSRDIIPEVADKVLAVTEEWAAHHPNTVIA 232
+ + +ID F G+PW ++ + A + + P ++ LA+ +W HP +A
Sbjct 227 NMRNGTIDCFSTGDPWPSRIAKDDIGYQAALTGQMWPYHPEEFLALRADWVDKHPKATLA 286
Query 233 LTAAILKAQQELETLSNLEPVWQILINFN 261
L +++AQQ + +N + +IL N
Sbjct 287 LLMGLMEAQQWCDQKANRAEMAKILSGRN 315
>P73452 Nitrate/nitrite binding protein NrtA [Synechocystis sp.
(strain PCC 6803 / Kazusa)]
Length=446
Score = 99.8 bits (247), Expect = 1e-26
Identities = 71/258 (28%), Positives = 121/258 (47%), Gaps = 20/258 (8%)
Query 10 QLGYIPLLDCIALLWAKERGYFEEMGL-DVTLVKEASWASLRDRLAFGI----LDAAHCL 64
+LG+I L D L+ AKE+G++ + G+ DV ++K+ASW + RD L G +D AH L
Sbjct 65 KLGFIALTDAAPLIIAKEKGFYAKYGMPDVEVLKQASWGTTRDNLVLGSASGGIDGAHIL 124
Query 65 SAMLPAAAIGEDQIGIPLKTPLVLSKNRAYISLSQKLCYELSIQNADNAQE-----NSAK 119
+ M +G G P TP+ + L++ IQ +N ++ ++A
Sbjct 125 TPMPYLITMGTVTDGKP--TPMYI--------LARLNVNGQGIQLGNNYKDLKVGTDAAP 174
Query 120 LVKYLEQEQSIALAHVFHHSIHHYCLREWLALSHLDLAKAIQLKTLPPPYMLDALASASI 179
L + + +A F H +R WLA ++ K +PP M+ + ++
Sbjct 175 LKEAFAKVTDPKVAMTFPGGTHDMWIRYWLAAGGMEPGKDFSTIVVPPAQMVANVKVNAM 234
Query 180 DGFCVGEPWNTQGEIEGYSQIVASSRDIIPEVADKVLAVTEEWAAHHPNTVIALTAAILK 239
+ FCVGEPW Q +G ++ + + +K + +W +P AL A+++
Sbjct 235 ESFCVGEPWPLQTVNQGVGYQALTTGQLWKDHPEKAFGMRADWVDQNPKAAKALLMAVME 294
Query 240 AQQELETLSNLEPVWQIL 257
AQQ + N E + QIL
Sbjct 295 AQQWCDQAENKEEMCQIL 312
>P38045 Nitrate import ATP-binding protein NrtC [Synechococcus
elongatus (strain ATCC 33912 / PCC 7942 / FACHB-805)]
Length=659
Score = 100 bits (249), Expect = 2e-26
Identities = 70/237 (30%), Positives = 120/237 (51%), Gaps = 8/237 (3%)
Query 5 EKKQLQLGYIPLLDCIALLWAKERGYFEEMGLDVTLVKEASWASLRDRLAFGILDAAHCL 64
++K ++LG++P DC L A+E G F+++GL V L +W +L D + G L+ A +
Sbjct 277 QQKTVRLGFLPGNDCAPLAIAQELGLFQDLGLSVELQSFLTWEALEDSIRLGQLEGALMM 336
Query 65 SAMLPAAAIG-EDQIGIPLKTPLVLSKNRAYISLSQKLCYELSIQNADNAQENSAKLVKY 123
+A A +G + TPL +S+N I+LS++ + + E+ + +
Sbjct 337 AAQPLAMTMGLGGHRPFAIATPLTVSRNGGAIALSRRY-----LNAGVRSLEDLCQFLAA 391
Query 124 LEQEQSIALAHVFHHSIHHYCLREWLALSHLDLAKAIQLKTLPPPYMLDALASASIDGFC 183
Q +A+ ++ LR WLA + L+ + ++L + P M++AL + IDGF
Sbjct 392 TPQRLRLAIPDPI--AMPALLLRYWLASAGLNPEQDVELVGMSPYEMVEALKAGDIDGFA 449
Query 184 VGEPWNTQGEIEGYSQIVASSRDIIPEVADKVLAVTEEWAAHHPNTVIALTAAILKA 240
GE G + ++A+ DI +KVL + E W +P T IAL +A+LKA
Sbjct 450 AGEMRIALAVQAGAAYVLATDLDIWAGHPEKVLGLPEAWLQVNPETAIALCSALLKA 506
>Q55460 Bicarbonate-binding protein CmpA [Synechocystis sp. (strain
PCC 6803 / Kazusa)]
Length=452
Score = 83.6 bits (205), Expect = 5e-21
Identities = 62/271 (23%), Positives = 118/271 (44%), Gaps = 23/271 (8%)
Query 5 EKKQLQLGYIPLLDCIALLWAKERGYFEEMGLD-VTLVKEASWASLRDRLAFGILDAAHC 63
E ++LGYIP+++ L+ A+E+G+F + G+ V + K+A+WAS RD + G
Sbjct 57 ETANIKLGYIPIVEAAPLIIAQEKGFFAKYGMTGVEVSKQANWASARDNVTIGSQGGG-- 114
Query 64 LSAMLPAAAIGEDQIGIP--LKTPLVLSKNRAYISLSQKLCYE------LSIQNADNAQE 115
G+ Q+ +P + ++ + N+ + + +L + +
Sbjct 115 -------IDGGQWQMPMPHLITEGIITNGNKVPMYVLAQLITQGNGIAVAPMHEGKGVNL 167
Query 116 NSAKLVKYLE-----QEQSIALAHVFHHSIHHYCLREWLALSHLDLAKAIQLKTLPPPYM 170
+ K Y++ + AH F + + +R W A +D I L +PP
Sbjct 168 DITKAADYIKGFNKTNGRKFKAAHTFPNVNQDFWIRYWFAAGGVDPDTDIDLLAVPPAET 227
Query 171 LDALASASIDGFCVGEPWNTQGEIEGYSQIVASSRDIIPEVADKVLAVTEEWAAHHPNTV 230
+ + + ++D F G+PW + E + + I P ++ LA+ +W +P
Sbjct 228 VQGMRNGTMDAFSTGDPWPYRIVTENIGYMAGLTAQIWPYHPEEYLAIRADWVDKNPKAT 287
Query 231 IALTAAILKAQQELETLSNLEPVWQILINFN 261
AL I++AQQ ++ N V QI+ N
Sbjct 288 KALLKGIMEAQQWIDDPKNRPEVVQIVSGRN 318
Score = 17.7 bits (34), Expect = 7.9
Identities = 8/29 (28%), Positives = 13/29 (45%), Gaps = 0/29 (0%)
Query 183 CVGEPWNTQGEIEGYSQIVASSRDIIPEV 211
C G P + G + ++ DI PE+
Sbjct 26 CAGNPPDPNAASTGTNPSPQAAGDISPEM 54
Lambda K H a alpha
0.321 0.133 0.403 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 1620600
Database: f8bc4efb9c2c772d0d7f71d6ea83a769.SwissProt.fasta
Posted date: May 9, 2024 11:26 AM
Number of letters in database: 6,003
Number of sequences in database: 11
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
