BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: 2ad91abfeda76f85a6acea75fd3c0875.SwissProt.fasta
           1 sequences; 147 total letters



Query= ACIAD1951

Length=149
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

P11469 Uncharacterized protein YsmA [Bacillus subtilis (strain 168)]  57.0    6e-16


>P11469 Uncharacterized protein YsmA [Bacillus subtilis (strain 
168)]
Length=147

 Score = 57.0 bits (136),  Expect = 6e-16
 Identities = 34/131 (26%), Positives = 67/131 (51%), Gaps = 2/131 (2%)

Query  13   RDQFSFFLKIQTRWADNDLYGHVNNVTYYSYFDTAANSFLIQHVGFDIHHSPIIGLVVDS  72
            +  FSFF K+  R+++ D++GH+NNVT + YF+    S+  + +     +   + +V   
Sbjct  15   KTSFSFFNKVSVRFSETDMFGHMNNVTPFIYFEEVRISY-FKKLNMMSENKQTMTVVASQ  73

Query  73   ACCFFQELSFPEIIEVGVAISKIGNSSLTYELAIFKEKHHQPSAQGHFVHVFVDRTTRKS  132
             C + +++   E + + V  S +G+SSLT    + +    +P   G  V V V + + K+
Sbjct  74   QCDYLRQVMPYEELRIYVKTSAVGSSSLTLHY-LGENLEGEPCFTGAVVMVQVSKESGKA  132

Query  133  TTIPENMREIL  143
             +  +  +E L
Sbjct  133  VSWTDEEKETL  143



Lambda      K        H        a         alpha
   0.328    0.139    0.423    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 17423


  Database: 2ad91abfeda76f85a6acea75fd3c0875.SwissProt.fasta
    Posted date:  May 9, 2024  10:53 AM
  Number of letters in database: 147
  Number of sequences in database:  1



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40