BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 66e0e8ddb90db76ec227221d198ef202.SwissProt.fasta
2 sequences; 643 total letters
Query= ACIAD1962
Length=380
Score E
Sequences producing significant alignments: (Bits) Value
B8HYG3 Gamma-glutamyl phosphate reductase [Cyanothece sp. (strain... 36.2 1e-06
Q9K9W3 Orotate phosphoribosyltransferase [Halalkalibacterium halo... 35.0 2e-06
>B8HYG3 Gamma-glutamyl phosphate reductase [Cyanothece sp. (strain
PCC 7425 / ATCC 29141)]
Length=433
Score = 36.2 bits (82), Expect = 1e-06
Identities = 50/210 (24%), Positives = 90/210 (43%), Gaps = 30/210 (14%)
Query 176 GLDQMSHVVTATLADWSSGIHMAGLNCQSVALMTGKWQWQDAKEPLQINMPKVDTVAFGA 235
G + H A +A G+ AGLN S+AL+T + ++ L+++ +VD +
Sbjct 152 GGQEALHSCKALVAAIHQGLASAGLNPDSIALLTSR---EETLALLELDQ-QVDLI---- 203
Query 236 YATLSEPTWGRLPIQDTSAYIRLKVKPQQRILVLGSGEYVWSSFLLAEDLQRQGAEVKFS 295
+P + ++A++R V+ RI VLG E + ++ Q ++
Sbjct 204 -----------IP-RGSNAFVRF-VQEHTRIPVLGHAEGICHLYVDQTADLEQAVQIAID 250
Query 296 AITRSPIAIGHAIQSALA-------FSDNYGLGIQNFVYNINPSEYDRIFITVETCAES- 347
A T+ P A +AI++ L F +Q + E R I V AES
Sbjct 251 AKTQYPAAC-NAIETLLVHRAIAPQFLPQLATALQALKVELRGDELTREIIPVAPAAESD 309
Query 348 VASSLLDAIPNAEVISAVEFPHQNLNLCGT 377
A+ D I + +V++ +E ++N G+
Sbjct 310 WATEYSDLILSIKVVADLESAINHINTYGS 339
Score = 19.2 bits (38), Expect = 0.31
Identities = 20/83 (24%), Positives = 34/83 (41%), Gaps = 24/83 (29%)
Query 88 LGAGVHQVLQER--YPDALYVTTTRHPV---------------EGAPLLARFLEEHS--- 127
L A +HQ L PD++ + T+R G+ RF++EH+
Sbjct 163 LVAAIHQGLASAGLNPDSIALLTSREETLALLELDQQVDLIIPRGSNAFVRFVQEHTRIP 222
Query 128 ---HAQDQL-LYGSPDADIQKKI 146
HA+ LY AD+++ +
Sbjct 223 VLGHAEGICHLYVDQTADLEQAV 245
Score = 16.9 bits (32), Expect = 1.6
Identities = 11/30 (37%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Query 343 TCAESVASSLLDAIPNAEV-ISAVEFPHQN 371
TC V + +A P+A V ISA+ N
Sbjct 117 TCPLGVLGVIFEARPDAVVQISALAIKSGN 146
>Q9K9W3 Orotate phosphoribosyltransferase [Halalkalibacterium
halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM
9153 / C-125)]
Length=210
Score = 35.0 bits (79), Expect = 2e-06
Identities = 32/134 (24%), Positives = 51/134 (38%), Gaps = 26/134 (19%)
Query 54 PKVMRHAFTDLAQLIPSNLPEPILVIGMAETAVGLGAGVHQVLQERYPDALYVTTTRHPV 113
P + + QLI S+ PE +V G A + A V LQ
Sbjct 44 PHIRQSIAEGFEQLIRSHFPEVTVVAGTATAGIPHAAWVSDRLQ---------------- 87
Query 114 EGAPLLARFLEEHSHAQDQLLYGSPDADIQKKILASKSIVLVDDEASTGKTFINLVSALQ 173
AP++ + H + + G K+ + +V+++D STG + I AL+
Sbjct 88 --APMVYVRSKSKGHGKQNQIEG--------KLSSKDRVVIIEDLISTGGSVIQAADALR 137
Query 174 AAGLDQMSHVVTAT 187
AG D + V T
Sbjct 138 EAGADVLGVVAIFT 151
Score = 22.7 bits (47), Expect = 0.021
Identities = 21/75 (28%), Positives = 31/75 (41%), Gaps = 5/75 (7%)
Query 191 WSSGIHMAGLNCQSVALMTGKWQWQDAKEP----LQINMPKVDTVAFGAYATLSEPTWGR 246
WSSGI + + C + M Q E ++ + P+V VA A A + W
Sbjct 25 WSSGIK-SPIYCDNRLTMGYPHIRQSIAEGFEQLIRSHFPEVTVVAGTATAGIPHAAWVS 83
Query 247 LPIQDTSAYIRLKVK 261
+Q Y+R K K
Sbjct 84 DRLQAPMVYVRSKSK 98
Lambda K H a alpha
0.320 0.135 0.400 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 198950
Database: 66e0e8ddb90db76ec227221d198ef202.SwissProt.fasta
Posted date: May 9, 2024 4:46 PM
Number of letters in database: 643
Number of sequences in database: 2
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
