BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: 265e99a51bce5f1d004cbe0b2ad38c27.SwissProt.fasta
           1 sequences; 253 total letters



Query= ACIAD1965

Length=603
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

P76395 Serine/threonine-protein phosphatase 3 [Escherichia coli (...  43.9    3e-09


>P76395 Serine/threonine-protein phosphatase 3 [Escherichia coli 
(strain K12)]
Length=253

 Score = 43.9 bits (102),  Expect = 3e-09
 Identities = 45/180 (25%), Positives = 75/180 (42%), Gaps = 34/180 (19%)

Query  352  LIVADGAGSASYSRQGSLLAVQSAAKTLTDYLEQHHPHLDRLLQQWQVGSDDEMTKSVAQ  411
            + VADGAGS S   +G++LAV  A             ++ + +Q  ++G +D +  ++  
Sbjct  42   VFVADGAGSVSQGGEGAMLAVNEAM-----------AYMSQKVQGGELGLNDVLATNMVL  90

Query  412  QIYKDFHDTFYKTAQAAIEAIEQEAELKQVAAKAYATTLLVAVVKQCEQKTFISTFWVGD  471
             I                + +  EAE K++A + +A T L  +       T I    +GD
Sbjct  91   TIR---------------QRLFAEAEAKELAVRDFACTFLGLI--SSPDGTLI--MQIGD  131

Query  472  GAIAVYAKDKVRLMGKPDGGEFAGQTRFL-DRSFAQQFASRVNIGYYDDCEAVILMTDGI  530
            G + V     ++L   P  GE+A  T F+ D     +  +  + G       V   TDGI
Sbjct  132  GGVVVDLGHGLQLPLTPMAGEYANMTHFITDEDAVSRLETFTSTG---RAHKVAAFTDGI  188


 Score = 15.8 bits (29),  Expect = 2.3
 Identities = 9/20 (45%), Positives = 12/20 (60%), Gaps = 1/20 (5%)

Query  305  HSDHQLIETEYFN-LAACSQ  323
            +S H    T +FN LAA +Q
Sbjct  198  NSPHVPFFTPFFNGLAAATQ  217


 Score = 14.6 bits (26),  Expect = 5.3
 Identities = 6/14 (43%), Positives = 7/14 (50%), Gaps = 0/14 (0%)

Query  11   TAFLNTLKQLLQDQ  24
            T F N L    Q+Q
Sbjct  206  TPFFNGLAAATQEQ  219



Lambda      K        H        a         alpha
   0.317    0.131    0.383    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 127779


  Database: 265e99a51bce5f1d004cbe0b2ad38c27.SwissProt.fasta
    Posted date:  May 8, 2024  7:45 AM
  Number of letters in database: 253
  Number of sequences in database:  1



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40