BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 29f9535b382e5ddc5e03331752d5984c.TrEMBL.fasta
11 sequences; 1,759 total letters
Query= ACIAD2020
Length=68
Score E
Sequences producing significant alignments: (Bits) Value
Q6FAS0 Uncharacterized protein [Acinetobacter baylyi (strain ATCC... 142 1e-50
A0A009ZN15 Glutathione-dependent formaldehyde-activating enzyme f... 54.3 5e-15
N9DFV5 CENP-V/GFA domain-containing protein [Acinetobacter ursing... 54.3 5e-15
A0A7T9UH86 GFA family protein [Acinetobacter ursingii] 54.3 5e-15
A0A427PWH7 GFA family protein [Acinetobacter sp. FDAARGOS_515] 54.3 5e-15
A0A3A8EXQ5 GFA family protein [Acinetobacter guerrae] 50.4 1e-13
N9BN45 CENP-V/GFA domain-containing protein [Acinetobacter soli N... 46.2 6e-12
A0A3R9BTA2 GFA family protein [Acinetobacter soli] 44.7 2e-11
A0A0M1I598 Aldehyde-activating protein [Acinetobacter sp. C15] 44.3 3e-11
A0A1P8EHC7 Aldehyde-activating protein [Acinetobacter soli] 40.0 1e-09
A0A1Y2CRR7 DNA polymerase beta thumb domain-containing protein [R... 35.4 1e-07
>Q6FAS0 Uncharacterized protein [Acinetobacter baylyi (strain
ATCC 33305 / BD413 / ADP1)]
Length=67
Score = 142 bits (358), Expect = 1e-50
Identities = 66/67 (99%), Positives = 67/67 (100%), Gaps = 0/67 (0%)
Query 1 LSFLCFKYLKVKLPDHLLNTELFKLPDNAQIHVEIYVDHKSHDDRCLSQFCQINEQDMID 60
+SFLCFKYLKVKLPDHLLNTELFKLPDNAQIHVEIYVDHKSHDDRCLSQFCQINEQDMID
Sbjct 1 MSFLCFKYLKVKLPDHLLNTELFKLPDNAQIHVEIYVDHKSHDDRCLSQFCQINEQDMID 60
Query 61 LFAIQNT 67
LFAIQNT
Sbjct 61 LFAIQNT 67
>A0A009ZN15 Glutathione-dependent formaldehyde-activating enzyme
family protein [Acinetobacter sp. 479375]
Length=135
Score = 54.3 bits (129), Expect = 5e-15
Identities = 26/49 (53%), Positives = 36/49 (73%), Gaps = 0/49 (0%)
Query 18 LNTELFKLPDNAQIHVEIYVDHKSHDDRCLSQFCQINEQDMIDLFAIQN 66
LN +LF+LP+ A+IH+EIYVDHK LS Q+ EQD+I+LF+ +N
Sbjct 87 LNAQLFELPEQAKIHLEIYVDHKPTYYPFLSSAKQMTEQDVIELFSSEN 135
>N9DFV5 CENP-V/GFA domain-containing protein [Acinetobacter ursingii
ANC 3649]
Length=135
Score = 54.3 bits (129), Expect = 5e-15
Identities = 26/49 (53%), Positives = 36/49 (73%), Gaps = 0/49 (0%)
Query 18 LNTELFKLPDNAQIHVEIYVDHKSHDDRCLSQFCQINEQDMIDLFAIQN 66
LN +LF+LP+ A+IH+EIYVDHK LS Q+ EQD+I+LF+ +N
Sbjct 87 LNAQLFELPEQAKIHLEIYVDHKPAYYPFLSSAKQMTEQDVIELFSSEN 135
>A0A7T9UH86 GFA family protein [Acinetobacter ursingii]
Length=135
Score = 54.3 bits (129), Expect = 5e-15
Identities = 26/49 (53%), Positives = 36/49 (73%), Gaps = 0/49 (0%)
Query 18 LNTELFKLPDNAQIHVEIYVDHKSHDDRCLSQFCQINEQDMIDLFAIQN 66
LN +LF+LP+ A+IH+EIYVDHK LS Q+ EQD+I+LF+ +N
Sbjct 87 LNAQLFELPEQAKIHLEIYVDHKPTYYPFLSSAKQMTEQDVIELFSSEN 135
>A0A427PWH7 GFA family protein [Acinetobacter sp. FDAARGOS_515]
Length=135
Score = 54.3 bits (129), Expect = 5e-15
Identities = 26/49 (53%), Positives = 36/49 (73%), Gaps = 0/49 (0%)
Query 18 LNTELFKLPDNAQIHVEIYVDHKSHDDRCLSQFCQINEQDMIDLFAIQN 66
LN +LF+LP+ A+IH+EIYVDHK LS Q+ EQD+I+LF+ +N
Sbjct 87 LNAQLFELPEQAKIHLEIYVDHKPAYYPFLSSAKQMTEQDVIELFSSEN 135
>A0A3A8EXQ5 GFA family protein [Acinetobacter guerrae]
Length=135
Score = 50.4 bits (119), Expect = 1e-13
Identities = 25/49 (51%), Positives = 33/49 (67%), Gaps = 0/49 (0%)
Query 18 LNTELFKLPDNAQIHVEIYVDHKSHDDRCLSQFCQINEQDMIDLFAIQN 66
LN +LF LP+ A+IH+EIY DHK LS Q+ EQD+I+LF+ N
Sbjct 87 LNAQLFDLPEQAKIHLEIYADHKPAYYPFLSSAKQLTEQDVINLFSSGN 135
>N9BN45 CENP-V/GFA domain-containing protein [Acinetobacter soli
NIPH 2899]
Length=135
Score = 46.2 bits (108), Expect = 6e-12
Identities = 22/46 (48%), Positives = 31/46 (67%), Gaps = 0/46 (0%)
Query 18 LNTELFKLPDNAQIHVEIYVDHKSHDDRCLSQFCQINEQDMIDLFA 63
+N ELF L NA+IH+EIY DHK + L++ Q+ EQ +ID F+
Sbjct 87 INAELFDLASNAKIHLEIYADHKPDYYQFLTKSPQMTEQQVIDQFS 132
>A0A3R9BTA2 GFA family protein [Acinetobacter soli]
Length=135
Score = 44.7 bits (104), Expect = 2e-11
Identities = 21/46 (46%), Positives = 31/46 (67%), Gaps = 0/46 (0%)
Query 18 LNTELFKLPDNAQIHVEIYVDHKSHDDRCLSQFCQINEQDMIDLFA 63
+N ELF L +A+IH+EIY DHK + L++ Q+ EQ +ID F+
Sbjct 87 INAELFDLTSDAKIHLEIYADHKPEYYQFLTKSPQMTEQQVIDQFS 132
>A0A0M1I598 Aldehyde-activating protein [Acinetobacter sp. C15]
Length=135
Score = 44.3 bits (103), Expect = 3e-11
Identities = 21/46 (46%), Positives = 31/46 (67%), Gaps = 0/46 (0%)
Query 18 LNTELFKLPDNAQIHVEIYVDHKSHDDRCLSQFCQINEQDMIDLFA 63
+N ELF L +A+IH+EIY DHK + L++ Q+ EQ +ID F+
Sbjct 87 INAELFDLASDAKIHLEIYADHKPDYYQFLTKSPQMTEQQVIDQFS 132
>A0A1P8EHC7 Aldehyde-activating protein [Acinetobacter soli]
Length=135
Score = 40.0 bits (92), Expect = 1e-09
Identities = 20/46 (43%), Positives = 30/46 (65%), Gaps = 0/46 (0%)
Query 18 LNTELFKLPDNAQIHVEIYVDHKSHDDRCLSQFCQINEQDMIDLFA 63
+N ELF L +A+IH+EIY D K + L++ Q+ EQ +ID F+
Sbjct 87 INAELFDLTSDAKIHLEIYADLKPDYYQFLTKSPQMTEQQVIDQFS 132
>A0A1Y2CRR7 DNA polymerase beta thumb domain-containing protein
[Rhizoclosmatium globosum]
Length=477
Score = 35.4 bits (80), Expect = 1e-07
Identities = 21/55 (38%), Positives = 29/55 (53%), Gaps = 8/55 (15%)
Query 13 LPDHLLNTELFKLPDNAQ-------IHVEIYVDHKSHDDRCLSQFCQINEQDMID 60
L D + ELF LP A+ H+EI V +K H RC+ + CQ+ E D +D
Sbjct 303 LNDSITELELFCLPLGARRRGDLMFTHLEIMVSYKPHQSRCICRQCQL-EDDGLD 356
Lambda K H a alpha
0.335 0.147 0.468 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 63812
Database: 29f9535b382e5ddc5e03331752d5984c.TrEMBL.fasta
Posted date: May 30, 2024 10:41 AM
Number of letters in database: 1,759
Number of sequences in database: 11
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
