BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: c97a3dd69fb44682ede7f3fadf9662fd.SwissProt.fasta
5 sequences; 5,361 total letters
Query= ACIAD2054
Length=471
Score E
Sequences producing significant alignments: (Bits) Value
Q6P0R8 Shootin-1 [Danio rerio] 42.0 3e-07
Q54WH2 Formin-A [Dictyostelium discoideum] 38.9 3e-06
Q54S20 Mediator of RNA polymerase II transcription subunit 13 [Di... 37.0 1e-05
A3A2W2 CASP-like protein 4A2 [Oryza sativa subsp. japonica] 36.2 1e-05
Q5TM66 Phostensin [Macaca mulatta] 35.8 2e-05
>Q6P0R8 Shootin-1 [Danio rerio]
Length=544
Score = 42.0 bits (97), Expect = 3e-07
Identities = 23/59 (39%), Positives = 31/59 (53%), Gaps = 4/59 (7%)
Query 14 YAASNTEVDALRKEVNELKQLVQQLSTQQKAAPVVMAPPPPAPVMAQAPAPAAPSNAKP 72
+ + TE LR V ELK+ +QQ+S AAP PPPP P P P + S++ P
Sbjct 323 HTKAETEAKDLRFTVEELKKKLQQVSNPPTAAPAPPPPPPPPP----PPPPPSSSSSNP 377
Score = 18.1 bits (35), Expect = 7.7
Identities = 6/15 (40%), Positives = 8/15 (53%), Gaps = 0/15 (0%)
Query 54 PAPVMAQAPAPAAPS 68
P P + P P +PS
Sbjct 466 PGPSSSPGPRPPSPS 480
>Q54WH2 Formin-A [Dictyostelium discoideum]
Length=1218
Score = 38.9 bits (89), Expect = 3e-06
Identities = 22/54 (41%), Positives = 27/54 (50%), Gaps = 7/54 (13%)
Query 26 KEVNELKQLVQQLSTQQ-------KAAPVVMAPPPPAPVMAQAPAPAAPSNAKP 72
+E+N+LK LV+QL Q AA +APPPP P M AP P P
Sbjct 618 EEINQLKALVEQLKLTQGTAKPDSAAASTSVAPPPPPPPMTGGGAPPPPPPPPP 671
Score = 26.6 bits (57), Expect = 0.020
Identities = 11/23 (48%), Positives = 11/23 (48%), Gaps = 0/23 (0%)
Query 51 PPPPAPVMAQAPAPAAPSNAKPG 73
PPPP P P P P AK G
Sbjct 707 PPPPPPPGGGPPPPPPPPGAKAG 729
Score = 23.9 bits (50), Expect = 0.13
Identities = 8/17 (47%), Positives = 9/17 (53%), Gaps = 0/17 (0%)
Query 51 PPPPAPVMAQAPAPAAP 67
PPPP P+ P P P
Sbjct 681 PPPPPPMTGGGPPPPPP 697
Score = 23.9 bits (50), Expect = 0.13
Identities = 8/17 (47%), Positives = 9/17 (53%), Gaps = 0/17 (0%)
Query 51 PPPPAPVMAQAPAPAAP 67
PPPP P+ P P P
Sbjct 695 PPPPPPMTGGGPPPPPP 711
Score = 23.5 bits (49), Expect = 0.18
Identities = 16/62 (26%), Positives = 21/62 (34%), Gaps = 11/62 (18%)
Query 46 PVVMAPPPP----------APVMAQAPAPAAPSNAKPGWFTLPDGQTQVKFYGSIRTDAT 95
P PPPP AP + P PA W +L D + Q + D +
Sbjct 737 PFGKGPPPPPGGFGMKKAAAPPRKEVPVPALKMKGLQ-WVSLNDKKIQGTIFSKFNLDTS 795
Query 96 YD 97
D
Sbjct 796 KD 797
Score = 23.1 bits (48), Expect = 0.23
Identities = 9/17 (53%), Positives = 10/17 (59%), Gaps = 0/17 (0%)
Query 51 PPPPAPVMAQAPAPAAP 67
PPPP P A+A P P
Sbjct 718 PPPPPPPGAKAGGPPPP 734
Score = 22.7 bits (47), Expect = 0.30
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Query 9 LALPAYAASNTEVDALRKEVNELK----QLVQQLSTQQKAAPVVMAPP 52
+A+ A + D +K +E++ QLV+QL+T KA +M P
Sbjct 125 IAITAINFGKDKQDEEKKRHDEIQKKFAQLVEQLATDSKAREGMMKLP 172
Score = 22.3 bits (46), Expect = 0.40
Identities = 12/30 (40%), Positives = 12/30 (40%), Gaps = 5/30 (17%)
Query 51 PPPPAPVMAQAPAPAAPSNAK-----PGWF 75
PPPP A P P P K PG F
Sbjct 720 PPPPPGAKAGGPPPPPPPFGKGPPPPPGGF 749
Score = 21.9 bits (45), Expect = 0.52
Identities = 10/25 (40%), Positives = 10/25 (40%), Gaps = 3/25 (12%)
Query 51 PPPPAPVM---AQAPAPAAPSNAKP 72
PPPP P M P P P P
Sbjct 694 PPPPPPPMTGGGPPPPPPPPGGGPP 718
Score = 21.6 bits (44), Expect = 0.69
Identities = 8/17 (47%), Positives = 8/17 (47%), Gaps = 0/17 (0%)
Query 51 PPPPAPVMAQAPAPAAP 67
PPPP P M P P
Sbjct 680 PPPPPPPMTGGGPPPPP 696
Score = 19.2 bits (38), Expect = 3.5
Identities = 8/23 (35%), Positives = 8/23 (35%), Gaps = 0/23 (0%)
Query 51 PPPPAPVMAQAPAPAAPSNAKPG 73
PPPP P P PG
Sbjct 692 PPPPPPPPPMTGGGPPPPPPPPG 714
Score = 18.9 bits (37), Expect = 4.6
Identities = 9/25 (36%), Positives = 10/25 (40%), Gaps = 3/25 (12%)
Query 51 PPPPAPVMAQAPAPAAP---SNAKP 72
PPPP P P P P + P
Sbjct 708 PPPPPPGGGPPPPPPPPGAKAGGPP 732
>Q54S20 Mediator of RNA polymerase II transcription subunit 13
[Dictyostelium discoideum]
Length=2678
Score = 37.0 bits (84), Expect = 1e-05
Identities = 17/44 (39%), Positives = 28/44 (64%), Gaps = 0/44 (0%)
Query 89 SIRTDATYDFKGNPSPNINNNTSSVPLNSANATKNNLNVSAATT 132
+++T T +F N + NI+ NT++VP+ + AT N +AATT
Sbjct 598 TMQTTPTQEFSNNNNNNISINTTTVPITATTATATNKITTAATT 641
Score = 26.9 bits (58), Expect = 0.016
Identities = 42/220 (19%), Positives = 87/220 (40%), Gaps = 41/220 (19%)
Query 101 NPSPNINNNTSSVPLNSANATKNNLNVSA-ATTRFGFDFSRPTDLG------ELTGKIEA 153
N + NINNN+SS +S++ T NN+N + + + +LG + K
Sbjct 88 NNNNNINNNSSS---SSSSNTSNNINSNTLVNDPILLAYLKTIELGVPCLWRKTRSKKPI 144
Query 154 DFAGGIAADSSSRTTNGNGSLRVRHAYFSLGKWLVGQTTSPFVNTDTAPETVDFNGPMGY 213
+ + + +SS +T+ + R++++ T+P T+ V + P
Sbjct 145 NNSSNNSNITSSTSTDSSLKNRLKNS---------PSETTPPNTTNNNSNNVTKDSPPNA 195
Query 214 GSTRTVQVRYTQPIDANQKVLLALEGGDVDNFNSSNSTANTATNTTTSGGNRLPALTARY 273
+ + + P +N N++N+TA T TTT+ + +
Sbjct 196 TNKMSTSPKSLSPTISN---------------NNNNTTAAATTTTTTTNNSSNSPTSPTN 240
Query 274 DISTADKKGLLQVHGLVH-------ENRVSIATATNNTGT 306
+ + + H +V+ + ++A+ T+NT T
Sbjct 241 NNNNNNNNNSPSSHNVVNSPPSTSSRSPPTVASVTSNTST 280
Score = 26.6 bits (57), Expect = 0.020
Identities = 11/27 (41%), Positives = 17/27 (63%), Gaps = 0/27 (0%)
Query 98 FKGNPSPNINNNTSSVPLNSANATKNN 124
F N NINNN++++ N+ N+ NN
Sbjct 484 FNNNNKNNINNNSNNIINNNNNSNINN 510
Score = 25.4 bits (54), Expect = 0.046
Identities = 20/75 (27%), Positives = 34/75 (45%), Gaps = 11/75 (15%)
Query 239 GGDVDN------FNSSNSTANTATNTTTSGGNRLPALTARYDISTADKKGLLQVHGLVHE 292
GG+V+N N+ N+ NT + TTSG N ++R+ + D + +
Sbjct 20 GGNVNNNNNGPNINNPNNPNNTNSLPTTSGYN-----SSRFSVPNLDTDNFMTNIISMGV 74
Query 293 NRVSIATATNNTGTN 307
N+V A +N+ N
Sbjct 75 NKVGWALYRSNSNNN 89
Score = 25.4 bits (54), Expect = 0.046
Identities = 21/82 (26%), Positives = 34/82 (41%), Gaps = 12/82 (15%)
Query 51 PPPPAPVMAQAPAPAAPSNAKPGWFTLPDGQTQVKFYGSIRTDATYDFKGNPSPNINNNT 110
P P P+++ +N K G++Q K S R K + + N NNN
Sbjct 881 PSPKTPMISDDDQSLTANNEKKR-----HGKSQKKGRSSKR-------KKDDNSNNNNNN 928
Query 111 SSVPLNSANATKNNLNVSAATT 132
++ ++ AT +AATT
Sbjct 929 NTTTTSTITATTTTTTPTAATT 950
Score = 25.0 bits (53), Expect = 0.061
Identities = 13/40 (33%), Positives = 21/40 (53%), Gaps = 3/40 (8%)
Query 101 NPSPNINNNTSSVPLNSANATKNNLNVSAATTRFGFDFSR 140
N N+NNN + +N+ N N N ++ T G++ SR
Sbjct 18 NAGGNVNNNNNGPNINNPN---NPNNTNSLPTTSGYNSSR 54
Score = 24.3 bits (51), Expect = 0.10
Identities = 15/41 (37%), Positives = 23/41 (56%), Gaps = 4/41 (10%)
Query 87 YGSIRTDATYDFKGNPSPN--INNNTSS--VPLNSANATKN 123
YG+ +ATY K PSP+ + + SS P N+ N+ K+
Sbjct 836 YGNDHFNATYCVKAVPSPSSPLTQHPSSPHSPFNNVNSPKS 876
Score = 22.3 bits (46), Expect = 0.41
Identities = 20/89 (22%), Positives = 30/89 (34%), Gaps = 4/89 (4%)
Query 38 LSTQQKAAPVVMAPPPPAPVMAQAPAPAAPSNAKPGWFTLPDGQTQVKFYGSIRTDATYD 97
L + K +P PP + +P NA T P + + T A
Sbjct 163 LKNRLKNSPSETTPPNTTNNNSNNVTKDSPPNATNKMSTSPKSLSPTISNNNNNTTAA-- 220
Query 98 FKGNPSPNINNNTSSVPLNSANATKNNLN 126
+ NN+S+ P + N NN N
Sbjct 221 --ATTTTTTTNNSSNSPTSPTNNNNNNNN 247
Score = 22.3 bits (46), Expect = 0.41
Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 0/34 (0%)
Query 241 DVDNFNSSNSTANTATNTTTSGGNRLPALTARYD 274
D N N++N+T T+T T T+ A T D
Sbjct 920 DNSNNNNNNNTTTTSTITATTTTTTPTAATTGND 953
Score = 21.6 bits (44), Expect = 0.70
Identities = 9/20 (45%), Positives = 12/20 (60%), Gaps = 0/20 (0%)
Query 107 NNNTSSVPLNSANATKNNLN 126
NNN +++ NS N NN N
Sbjct 486 NNNKNNINNNSNNIINNNNN 505
Score = 21.2 bits (43), Expect = 0.93
Identities = 14/48 (29%), Positives = 20/48 (42%), Gaps = 6/48 (13%)
Query 76 TLPDGQTQVKFYGSIRTDATYDFKGNPSPNINNNTSSVPLNSANATKN 123
T+P T I T AT + INNN + + S +T+N
Sbjct 621 TVPITATTATATNKITTAAT------TTTTINNNNNKIQTESFGSTRN 662
Score = 21.2 bits (43), Expect = 0.93
Identities = 32/140 (23%), Positives = 48/140 (34%), Gaps = 19/140 (14%)
Query 46 PVVMAPPPPAPVM------AQAPAPAAPSNAKPGWFTLPDGQTQVKFYGSIRTDATY--- 96
P+ PPP P + P P PS K + + + G Y
Sbjct 1207 PLQQYQPPPPPTQQPQQAHLKPPPPKQPSAKKNSKDGINSDENKPFLDGQFLCPVPYKAP 1266
Query 97 DFKGNPSP--NINNNTSSVPLNSANATKNNLNVSAATTRF-GFDFSRPTDLGELTGKIEA 153
N P ++ +NT P N + N+L+ T+ G S + + G
Sbjct 1267 SLSQNQLPILHLPHNTEQSPSNDDLSNPNHLHHGTPTSAISGVGGSSSSSGNNMIG---- 1322
Query 154 DFAGGIAADSSSRTTNGNGS 173
+GGI S TN +GS
Sbjct 1323 --SGGIVG-SGGGNTNVSGS 1339
Score = 19.6 bits (39), Expect = 2.7
Identities = 8/22 (36%), Positives = 13/22 (59%), Gaps = 0/22 (0%)
Query 89 SIRTDATYDFKGNPSPNINNNT 110
+I +++ N S NIN+NT
Sbjct 92 NINNNSSSSSSSNTSNNINSNT 113
Score = 19.6 bits (39), Expect = 2.7
Identities = 9/27 (33%), Positives = 12/27 (44%), Gaps = 0/27 (0%)
Query 98 FKGNPSPNINNNTSSVPLNSANATKNN 124
F P N+ S P+NS + NN
Sbjct 2651 FNRCPKLTPNSKQSPSPINSPHLNSNN 2677
Score = 19.2 bits (38), Expect = 3.6
Identities = 20/77 (26%), Positives = 31/77 (40%), Gaps = 15/77 (19%)
Query 244 NFNSSNSTANTATNTTTSGGNRLPALTARYDISTADKKGLL-------QVHGLVHENRVS 296
N NS+N ++N N T S +P++ S++ + Q + N +S
Sbjct 559 NNNSNNISSNNDNNNTPS--QMVPSIDGHDSSSSSSTPSQVTMQTTPTQEFSNNNNNNIS 616
Query 297 I------ATATNNTGTN 307
I TAT T TN
Sbjct 617 INTTTVPITATTATATN 633
Score = 19.2 bits (38), Expect = 3.6
Identities = 9/17 (53%), Positives = 10/17 (59%), Gaps = 0/17 (0%)
Query 248 SNSTANTATNTTTSGGN 264
SNS N NTTT+ N
Sbjct 1465 SNSHHNHHHNTTTNNNN 1481
Score = 18.9 bits (37), Expect = 4.7
Identities = 10/24 (42%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Query 101 NPSPNINNNTSSVPLNSANATKNN 124
N S NI NN ++ +N+ N NN
Sbjct 494 NNSNNIINNNNNSNINN-NINNNN 516
Score = 18.9 bits (37), Expect = 4.7
Identities = 8/18 (44%), Positives = 10/18 (56%), Gaps = 0/18 (0%)
Query 243 DNFNSSNSTANTATNTTT 260
+N N+SN NT T T
Sbjct 798 NNNNTSNEINNTGTQIPT 815
Score = 18.9 bits (37), Expect = 4.7
Identities = 8/30 (27%), Positives = 17/30 (57%), Gaps = 0/30 (0%)
Query 101 NPSPNINNNTSSVPLNSANATKNNLNVSAA 130
N + N NNN + + N ++LN++++
Sbjct 1480 NNNHNNNNNNNHPNNHHQNNNHHHLNITSS 1509
Score = 18.9 bits (37), Expect = 4.7
Identities = 8/21 (38%), Positives = 12/21 (57%), Gaps = 0/21 (0%)
Query 243 DNFNSSNSTANTATNTTTSGG 263
+N + NS TN ++SGG
Sbjct 1778 NNIDLLNSQTYQNTNNSSSGG 1798
Score = 18.5 bits (36), Expect = 6.2
Identities = 23/79 (29%), Positives = 32/79 (41%), Gaps = 18/79 (23%)
Query 99 KGNPS----PNINNNTSSVPLNSANATKNNLNVSAATTRFGFDFSRPTDLGELTGKIEAD 154
K +PS PN NN NS N TK+ + AT + T L+ I +
Sbjct 168 KNSPSETTPPNTTNN------NSNNVTKD--SPPNATNKMS------TSPKSLSPTISNN 213
Query 155 FAGGIAADSSSRTTNGNGS 173
AA +++ TT N S
Sbjct 214 NNNTTAAATTTTTTTNNSS 232
Score = 18.5 bits (36), Expect = 6.2
Identities = 10/54 (19%), Positives = 27/54 (50%), Gaps = 0/54 (0%)
Query 81 QTQVKFYGSIRTDATYDFKGNPSPNINNNTSSVPLNSANATKNNLNVSAATTRF 134
QT+ + + + ++ N + N NNN ++ N+ + N+ +++ ++ F
Sbjct 1458 QTKYSPFSNSHHNHHHNTTTNNNNNHNNNNNNNHPNNHHQNNNHHHLNITSSLF 1511
Score = 18.5 bits (36), Expect = 6.2
Identities = 15/52 (29%), Positives = 24/52 (46%), Gaps = 8/52 (15%)
Query 341 DNRYLLYGNSAYVATINGTSVANSTDV--SIYESEFN-----SGLVGYSHKW 385
+++ L+ G S T +G A +T++ YE EF +VGY W
Sbjct 1840 NSKNLITGTSLISTTASGAGAAITTNLINQNYE-EFEWLPIPKIIVGYKEDW 1890
Score = 18.1 bits (35), Expect = 8.2
Identities = 7/24 (29%), Positives = 13/24 (54%), Gaps = 0/24 (0%)
Query 89 SIRTDATYDFKGNPSPNINNNTSS 112
+I ++ N + NINNN ++
Sbjct 491 NINNNSNNIINNNNNSNINNNINN 514
Score = 18.1 bits (35), Expect = 8.2
Identities = 16/80 (20%), Positives = 32/80 (40%), Gaps = 14/80 (18%)
Query 100 GNPSPNINNNTSSVPLNSAN----ATKNNLNVSAATTRFGFDFSRPTDLGELTGKIEADF 155
G+ S + ++ S V + + + NN N+S TT + T ++T
Sbjct 584 GHDSSSSSSTPSQVTMQTTPTQEFSNNNNNNISINTTTVPITATTATATNKIT------- 636
Query 156 AGGIAADSSSRTTNGNGSLR 175
AA +++ N N ++
Sbjct 637 ---TAATTTTTINNNNNKIQ 653
Score = 18.1 bits (35), Expect = 8.2
Identities = 17/67 (25%), Positives = 27/67 (40%), Gaps = 3/67 (4%)
Query 218 TVQVRYTQPIDANQKVLLALEGGDVDNFNSSNSTAN---TATNTTTSGGNRLPALTARYD 274
T+Q TQ N +++ V ++ + N TA TTT+ N +
Sbjct 598 TMQTTPTQEFSNNNNNNISINTTTVPITATTATATNKITTAATTTTTINNNNNKIQTESF 657
Query 275 ISTADKK 281
ST +KK
Sbjct 658 GSTRNKK 664
Score = 18.1 bits (35), Expect = 8.2
Identities = 10/32 (31%), Positives = 15/32 (47%), Gaps = 0/32 (0%)
Query 230 NQKVLLALEGGDVDNFNSSNSTANTATNTTTS 261
NQ+ L + V + +T T T TTT+
Sbjct 1088 NQRPLPVEDPFQVFQVPNKPATTTTTTTTTTT 1119
>A3A2W2 CASP-like protein 4A2 [Oryza sativa subsp. japonica]
Length=308
Score = 36.2 bits (82), Expect = 1e-05
Identities = 16/27 (59%), Positives = 19/27 (70%), Gaps = 0/27 (0%)
Query 44 AAPVVMAPPPPAPVMAQAPAPAAPSNA 70
AAPV++ PP PAP A APAP P+ A
Sbjct 111 AAPVLVPPPAPAPRPAPAPAPRVPARA 137
Score = 24.3 bits (51), Expect = 0.084
Identities = 11/18 (61%), Positives = 12/18 (67%), Gaps = 3/18 (17%)
Query 51 PPPPAP---VMAQAPAPA 65
PPPPAP V+ PAPA
Sbjct 105 PPPPAPAAPVLVPPPAPA 122
Score = 21.9 bits (45), Expect = 0.45
Identities = 9/19 (47%), Positives = 10/19 (53%), Gaps = 0/19 (0%)
Query 52 PPPAPVMAQAPAPAAPSNA 70
PPP P A P+P P A
Sbjct 91 PPPQPPRAWDPSPPPPPPA 109
Score = 21.9 bits (45), Expect = 0.45
Identities = 12/27 (44%), Positives = 12/27 (44%), Gaps = 4/27 (15%)
Query 46 PVVMAPPPPAPVMAQAPAPAAPSNAKP 72
P P PP P PAPAAP P
Sbjct 96 PRAWDPSPPPP----PPAPAAPVLVPP 118
Score = 21.6 bits (44), Expect = 0.59
Identities = 9/27 (33%), Positives = 11/27 (41%), Gaps = 0/27 (0%)
Query 46 PVVMAPPPPAPVMAQAPAPAAPSNAKP 72
P PP P +P P P+ A P
Sbjct 87 PQFQPPPQPPRAWDPSPPPPPPAPAAP 113
Score = 20.8 bits (42), Expect = 1.0
Identities = 9/24 (38%), Positives = 12/24 (50%), Gaps = 0/24 (0%)
Query 50 APPPPAPVMAQAPAPAAPSNAKPG 73
A P P+P ++P AA PG
Sbjct 5 AQPSPSPSPRRSPEAAAGGAGAPG 28
Score = 19.6 bits (39), Expect = 2.4
Identities = 9/29 (31%), Positives = 11/29 (38%), Gaps = 0/29 (0%)
Query 39 STQQKAAPVVMAPPPPAPVMAQAPAPAAP 67
S+ + V PPPP P P P
Sbjct 68 SSAARTGKPVSPPPPPRKKPQFQPPPQPP 96
Score = 19.6 bits (39), Expect = 2.4
Identities = 8/22 (36%), Positives = 10/22 (45%), Gaps = 0/22 (0%)
Query 49 MAPPPPAPVMAQAPAPAAPSNA 70
++PPPP Q P P A
Sbjct 77 VSPPPPPRKKPQFQPPPQPPRA 98
Score = 19.2 bits (38), Expect = 3.1
Identities = 8/21 (38%), Positives = 8/21 (38%), Gaps = 0/21 (0%)
Query 52 PPPAPVMAQAPAPAAPSNAKP 72
PPP P AP P P
Sbjct 103 PPPPPPAPAAPVLVPPPAPAP 123
Score = 18.9 bits (37), Expect = 4.2
Identities = 10/24 (42%), Positives = 13/24 (54%), Gaps = 4/24 (17%)
Query 50 APPPPAPVMAQAPAP-AAPSNAKP 72
+PPPP P + P P +A KP
Sbjct 56 SPPPPFP---RTPRPSSAARTGKP 76
>Q5TM66 Phostensin [Macaca mulatta]
Length=613
Score = 35.8 bits (81), Expect = 2e-05
Identities = 27/87 (31%), Positives = 36/87 (41%), Gaps = 14/87 (16%)
Query 41 QQKAAPVVMAPPPPAPVMAQAPAPAAPSNAKPGWFTLPDGQTQVKFYG-------SIRTD 93
QQ+ V + PPPPAP+ PAP AP PG D FYG
Sbjct 415 QQEEEAVELQPPPPAPLSPPPPAPTAPQ--PPG-----DPLMSRLFYGVKAGPGVGAPRR 467
Query 94 ATYDFKGNPSPNINNNTSSVPLNSANA 120
+ + F NP ++ T + P + A A
Sbjct 468 SGHTFTVNPRRSVPPTTPATPTSPATA 494
Score = 21.2 bits (43), Expect = 0.86
Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 2/44 (5%)
Query 31 LKQLVQQLSTQQKAAPVVMAPPPPAPVMA--QAPAPAAPSNAKP 72
++Q QQ QQ+ + ++A P P+ A + P+P + P
Sbjct 91 IRQERQQQQQQQQRSEELLAERKPVPLEARERRPSPGEMRDQSP 134
Score = 21.2 bits (43), Expect = 0.86
Identities = 21/84 (25%), Positives = 30/84 (36%), Gaps = 15/84 (18%)
Query 34 LVQQLSTQQKAAPVVMAP---------------PPPAPVMAQAPAPAAPSNAKPGWFTLP 78
L+ +L KA P V AP PP P +PA A + G P
Sbjct 448 LMSRLFYGVKAGPGVGAPRRSGHTFTVNPRRSVPPTTPATPTSPATADAAVPGAGKKRYP 507
Query 79 DGQTQVKFYGSIRTDATYDFKGNP 102
+ + G +R + KG+P
Sbjct 508 TAEEILVLGGYLRLSRSCLAKGSP 531
Lambda K H a alpha
0.312 0.129 0.374 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 2144520
Database: c97a3dd69fb44682ede7f3fadf9662fd.SwissProt.fasta
Posted date: May 19, 2024 9:19 PM
Number of letters in database: 5,361
Number of sequences in database: 5
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
