BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: ec432b2d2ee75b6490eea3476ac98c78.SwissProt.fasta
19 sequences; 4,763 total letters
Query= ACIAD2070
Length=220
Score E
Sequences producing significant alignments: (Bits) Value
Q9KTJ6 Probable D-methionine transport system permease protein Me... 223 2e-77
Q8ZH39 D-methionine transport system permease protein MetI [Yersi... 205 2e-70
Q8X800 D-methionine transport system permease protein MetI [Esche... 203 9e-70
P31547 D-methionine transport system permease protein MetI [Esche... 203 9e-70
Q8Z991 D-methionine transport system permease protein MetI [Salmo... 202 2e-69
Q8ZRN0 D-methionine transport system permease protein MetI [Salmo... 201 5e-69
O32168 Methionine import system permease protein MetP [Bacillus s... 187 2e-63
Q9CK96 Probable D-methionine transport system permease protein Me... 174 2e-58
P46492 Probable D-methionine transport system permease protein Me... 165 1e-54
E0SCY2 Glycine betaine/choline transport system permease protein ... 76.3 1e-19
P14176 Glycine betaine/proline betaine transport system permease ... 72.0 3e-18
P17327 Glycine betaine/proline betaine transport system permease ... 71.6 4e-18
Q8ZPK3 Osmoprotectant import permease protein OsmW [Salmonella ty... 67.0 5e-17
Q9KHT8 Carnitine transport permease protein OpuCB [Listeria monoc... 66.6 7e-17
G2JZ43 Carnitine transport permease protein OpuCB [Listeria monoc... 66.6 7e-17
Q9RR45 Glycine betaine/carnitine transport permease protein GbuB ... 65.9 3e-16
Q9KHT6 Carnitine transport permease protein OpuCD [Listeria monoc... 63.5 1e-15
G2JZ41 Carnitine transport permease protein OpuCD [Listeria monoc... 63.5 1e-15
P9WG11 Phosphate transport system permease protein PstA 1 [Mycoba... 62.8 4e-15
>Q9KTJ6 Probable D-methionine transport system permease protein
MetI [Vibrio cholerae serotype O1 (strain ATCC 39315 / El
Tor Inaba N16961)]
Length=225
Score = 223 bits (568), Expect = 2e-77
Identities = 109/211 (52%), Positives = 154/211 (73%), Gaps = 0/211 (0%)
Query 7 DLLITGTIDTLLMVGVSAFLAFLMGLPLAVILVCTSEHGIYPSLKINQPIGWIINITRSI 66
DLL+T T TL MV ++ + F +G+PL VIL T + G+ +L +N+ +G ++NI RS+
Sbjct 15 DLLLTATWQTLYMVAIAGAVGFALGIPLGVILHTTKKEGLLENLPLNRALGAVVNIGRSV 74
Query 67 PFLILMVALIPITRWIVGTSYGVWAAVVPLTLAATPFFARIAEVSLREVDQGLIEAAQAM 126
PFL+LMVA+IP+T+ IVGT G AA+VPLT+ A PF AR+ E +L EV GL+EAAQ+M
Sbjct 75 PFLVLMVAIIPVTKLIVGTFIGTTAAIVPLTIGAIPFVARLIESALLEVPTGLVEAAQSM 134
Query 127 GCNRKQIIWHVLLPEALPGIVAGFTVTIVTMINSSAIAGAIGAGGLGDIAYRYGYQRFDL 186
G QII VLLPEALP I+ T+T+VT+++ SA+AG +G GGLGD+A RYG+ R+D+
Sbjct 135 GATPLQIIRKVLLPEALPTILNSVTITLVTLVSYSAMAGTVGGGGLGDVAIRYGFHRYDI 194
Query 187 TVMFAVILVLIVLVMLIQATGDTLSNQLDKR 217
T+M +++LIVLV +IQ+ GD L ++D R
Sbjct 195 TIMAVTVVMLIVLVQIIQSIGDALVRRVDHR 225
>Q8ZH39 D-methionine transport system permease protein MetI [Yersinia
pestis]
Length=217
Score = 205 bits (521), Expect = 2e-70
Identities = 104/210 (50%), Positives = 148/210 (70%), Gaps = 0/210 (0%)
Query 1 MHDQLIDLLITGTIDTLLMVGVSAFLAFLMGLPLAVILVCTSEHGIYPSLKINQPIGWII 60
M + ++ L+ G +TL+M VS F F++GLP+ V+L T I + KI + + ++
Sbjct 1 MSEAMMWLMARGVWETLMMTFVSGFFGFVLGLPVGVLLYVTRPGQIIANNKIYRTLSGVV 60
Query 61 NITRSIPFLILMVALIPITRWIVGTSYGVWAAVVPLTLAATPFFARIAEVSLREVDQGLI 120
NI RSIPF+IL+V +IP TR IVGTS G+ AA+VPLT+ A PF AR+ E +L E+ GL+
Sbjct 61 NIFRSIPFIILLVWMIPFTRMIVGTSIGLQAAIVPLTVGAAPFIARMVENALLEIPSGLV 120
Query 121 EAAQAMGCNRKQIIWHVLLPEALPGIVAGFTVTIVTMINSSAIAGAIGAGGLGDIAYRYG 180
EAA+AMG QII VLLPEALPG+V T+T++T++ SA+ GA+GAGGLG I Y+YG
Sbjct 121 EAARAMGATPMQIIKKVLLPEALPGLVNAATITLITLVGYSAMGGAVGAGGLGQIGYQYG 180
Query 181 YQRFDLTVMFAVILVLIVLVMLIQATGDTL 210
Y ++ TVM V+++L++LV LIQ +GD +
Sbjct 181 YIGYNATVMNTVLVLLVILVYLIQLSGDRI 210
>Q8X800 D-methionine transport system permease protein MetI [Escherichia
coli O157:H7]
Length=217
Score = 203 bits (517), Expect = 9e-70
Identities = 104/217 (48%), Positives = 150/217 (69%), Gaps = 0/217 (0%)
Query 1 MHDQLIDLLITGTIDTLLMVGVSAFLAFLMGLPLAVILVCTSEHGIYPSLKINQPIGWII 60
M + ++ LL+ G +TL M VS F F++GLP+ V+L T I + K+ + + I+
Sbjct 1 MSEPMMWLLVRGVWETLAMTFVSGFFGFVVGLPVGVLLYVTRPGQIIANAKLYRTVSAIV 60
Query 61 NITRSIPFLILMVALIPITRWIVGTSYGVWAAVVPLTLAATPFFARIAEVSLREVDQGLI 120
NI RSIPF+IL+V +IP TR IVGTS G+ AA+VPLT+ A PF AR+ E +L E+ GLI
Sbjct 61 NIFRSIPFIILLVWMIPFTRVIVGTSIGLQAAIVPLTVGAAPFIARMVENALLEIPTGLI 120
Query 121 EAAQAMGCNRKQIIWHVLLPEALPGIVAGFTVTIVTMINSSAIAGAIGAGGLGDIAYRYG 180
EA++AMG QI+ VLLPEALPG+V T+T++T++ SA+ GA+GAGGLG I Y+YG
Sbjct 121 EASRAMGATPMQIVRKVLLPEALPGLVNAATITLITLVGYSAMGGAVGAGGLGQIGYQYG 180
Query 181 YQRFDLTVMFAVILVLIVLVMLIQATGDTLSNQLDKR 217
Y ++ TVM V+++L++LV LIQ GD + + ++
Sbjct 181 YIGYNATVMNTVLVLLVILVYLIQFAGDRIVRAVTRK 217
>P31547 D-methionine transport system permease protein MetI [Escherichia
coli (strain K12)]
Length=217
Score = 203 bits (517), Expect = 9e-70
Identities = 104/217 (48%), Positives = 150/217 (69%), Gaps = 0/217 (0%)
Query 1 MHDQLIDLLITGTIDTLLMVGVSAFLAFLMGLPLAVILVCTSEHGIYPSLKINQPIGWII 60
M + ++ LL+ G +TL M VS F F++GLP+ V+L T I + K+ + + I+
Sbjct 1 MSEPMMWLLVRGVWETLAMTFVSGFFGFVIGLPVGVLLYVTRPGQIIANAKLYRTVSAIV 60
Query 61 NITRSIPFLILMVALIPITRWIVGTSYGVWAAVVPLTLAATPFFARIAEVSLREVDQGLI 120
NI RSIPF+IL+V +IP TR IVGTS G+ AA+VPLT+ A PF AR+ E +L E+ GLI
Sbjct 61 NIFRSIPFIILLVWMIPFTRVIVGTSIGLQAAIVPLTVGAAPFIARMVENALLEIPTGLI 120
Query 121 EAAQAMGCNRKQIIWHVLLPEALPGIVAGFTVTIVTMINSSAIAGAIGAGGLGDIAYRYG 180
EA++AMG QI+ VLLPEALPG+V T+T++T++ SA+ GA+GAGGLG I Y+YG
Sbjct 121 EASRAMGATPMQIVRKVLLPEALPGLVNAATITLITLVGYSAMGGAVGAGGLGQIGYQYG 180
Query 181 YQRFDLTVMFAVILVLIVLVMLIQATGDTLSNQLDKR 217
Y ++ TVM V+++L++LV LIQ GD + + ++
Sbjct 181 YIGYNATVMNTVLVLLVILVYLIQFAGDRIVRAVTRK 217
>Q8Z991 D-methionine transport system permease protein MetI [Salmonella
typhi]
Length=217
Score = 202 bits (515), Expect = 2e-69
Identities = 103/210 (49%), Positives = 148/210 (70%), Gaps = 0/210 (0%)
Query 1 MHDQLIDLLITGTIDTLLMVGVSAFLAFLMGLPLAVILVCTSEHGIYPSLKINQPIGWII 60
M + ++ LL+ G +TL M VS F F++GLP+ V+L T I + ++ + + ++
Sbjct 1 MSEAMMWLLVRGVWETLAMTFVSGFFGFVIGLPVGVLLYVTRPGQIMENARLYRSLSAVV 60
Query 61 NITRSIPFLILMVALIPITRWIVGTSYGVWAAVVPLTLAATPFFARIAEVSLREVDQGLI 120
NI RSIPF+IL+V +IP TR IVGTS G+ AA+VPLT+ A PF ARI E +L E+ GLI
Sbjct 61 NIFRSIPFIILLVWMIPFTRIIVGTSIGLQAAIVPLTVGAAPFIARIVENALLEIPAGLI 120
Query 121 EAAQAMGCNRKQIIWHVLLPEALPGIVAGFTVTIVTMINSSAIAGAIGAGGLGDIAYRYG 180
EA++AMG QI+ +LLPEALPG+V T+T++T++ SA+ GA+GAGGLG I Y+YG
Sbjct 121 EASRAMGATPLQIVRKILLPEALPGLVNAATITLITLVGYSAMGGAVGAGGLGQIGYQYG 180
Query 181 YQRFDLTVMFAVILVLIVLVMLIQATGDTL 210
Y ++ TVM V+++L+VLV LIQ +GD +
Sbjct 181 YIGYNATVMNTVLVLLVVLVYLIQLSGDRI 210
>Q8ZRN0 D-methionine transport system permease protein MetI [Salmonella
typhimurium (strain LT2 / SGSC1412 / ATCC 700720)]
Length=217
Score = 201 bits (512), Expect = 5e-69
Identities = 102/210 (49%), Positives = 148/210 (70%), Gaps = 0/210 (0%)
Query 1 MHDQLIDLLITGTIDTLLMVGVSAFLAFLMGLPLAVILVCTSEHGIYPSLKINQPIGWII 60
M + ++ LL+ G +TL M VS F F++GLP+ V+L T I + ++ + + ++
Sbjct 1 MSEAMMWLLVRGVWETLAMTFVSGFFGFVIGLPVGVLLYVTRPGQIMENARLYRSLSAVV 60
Query 61 NITRSIPFLILMVALIPITRWIVGTSYGVWAAVVPLTLAATPFFARIAEVSLREVDQGLI 120
NI RSIPF+IL+V +IP TR IVGTS G+ AA+VPLT+ A PF AR+ E +L E+ GLI
Sbjct 61 NIFRSIPFIILLVWMIPFTRIIVGTSIGLQAAIVPLTVGAAPFIARMVENALLEIPAGLI 120
Query 121 EAAQAMGCNRKQIIWHVLLPEALPGIVAGFTVTIVTMINSSAIAGAIGAGGLGDIAYRYG 180
EA++AMG QI+ +LLPEALPG+V T+T++T++ SA+ GA+GAGGLG I Y+YG
Sbjct 121 EASRAMGATPLQIVRKILLPEALPGLVNAATITLITLVGYSAMGGAVGAGGLGQIGYQYG 180
Query 181 YQRFDLTVMFAVILVLIVLVMLIQATGDTL 210
Y ++ TVM V+++L+VLV LIQ +GD +
Sbjct 181 YIGYNATVMNTVLVLLVVLVYLIQLSGDRI 210
>O32168 Methionine import system permease protein MetP [Bacillus
subtilis (strain 168)]
Length=222
Score = 187 bits (475), Expect = 2e-63
Identities = 91/209 (44%), Positives = 145/209 (69%), Gaps = 0/209 (0%)
Query 9 LITGTIDTLLMVGVSAFLAFLMGLPLAVILVCTSEHGIYPSLKINQPIGWIINITRSIPF 68
L T +TL M +S AF++G+ L ++L TS+ ++ + +N I ++NI RSIPF
Sbjct 14 LWNATYETLYMTLISLLFAFVIGVILGLLLFLTSKGSLWQNKAVNSVIAAVVNIFRSIPF 73
Query 69 LILMVALIPITRWIVGTSYGVWAAVVPLTLAATPFFARIAEVSLREVDQGLIEAAQAMGC 128
LIL++ L+ T+++VGT G AA+ L + + PF+AR+ E++LREVD+G+IEAA++MG
Sbjct 74 LILIILLLGFTKFLVGTILGPNAALPALVIGSAPFYARLVEIALREVDKGVIEAAKSMGA 133
Query 129 NRKQIIWHVLLPEALPGIVAGFTVTIVTMINSSAIAGAIGAGGLGDIAYRYGYQRFDLTV 188
II+ VL+PE++P +++G TVT + +I S+AIAGAIG+GGLG++AY GYQ + V
Sbjct 134 KTSTIIFKVLIPESMPALISGITVTAIALIGSTAIAGAIGSGGLGNLAYVEGYQSNNADV 193
Query 189 MFAVILVLIVLVMLIQATGDTLSNQLDKR 217
F + ++++V +IQ GD ++N +DKR
Sbjct 194 TFVATVFILIIVFIIQIIGDLITNIIDKR 222
>Q9CK96 Probable D-methionine transport system permease protein
MetI [Pasteurella multocida (strain Pm70)]
Length=217
Score = 174 bits (442), Expect = 2e-58
Identities = 87/217 (40%), Positives = 142/217 (65%), Gaps = 0/217 (0%)
Query 1 MHDQLIDLLITGTIDTLLMVGVSAFLAFLMGLPLAVILVCTSEHGIYPSLKINQPIGWII 60
M ++ +L+ T++TL M ++ A ++GLP+ ++ T + I + + NQ + II
Sbjct 1 MTPRIWELVGLSTLETLYMGFIATLFAIVIGLPIGLLAFLTGKGEILENRRANQVLNVII 60
Query 61 NITRSIPFLILMVALIPITRWIVGTSYGVWAAVVPLTLAATPFFARIAEVSLREVDQGLI 120
NI RS+PF+IL++ L+P TR +VGT+ G AA+VPL+++A PFFAR+ +L E+ GL
Sbjct 61 NIGRSVPFIILLIILLPFTRLVVGTTLGTTAAIVPLSVSAIPFFARLTANALLEIPSGLT 120
Query 121 EAAQAMGCNRKQIIWHVLLPEALPGIVAGFTVTIVTMINSSAIAGAIGAGGLGDIAYRYG 180
EAA++MG QI+ LPE++P ++ G T+T+V +I SA+AGA+G GGLG++A YG
Sbjct 121 EAAKSMGATNWQIVTKYYLPESIPILINGITLTLVALIGYSAMAGAVGGGGLGNLAITYG 180
Query 181 YQRFDLTVMFAVILVLIVLVMLIQATGDTLSNQLDKR 217
R + V + ++++++VML Q GD L+ + D R
Sbjct 181 EHRNMIYVKWIATIIIVLIVMLSQKLGDHLAERFDHR 217
>P46492 Probable D-methionine transport system permease protein
MetI [Haemophilus influenzae (strain ATCC 51907 / DSM 11121
/ KW20 / Rd)]
Length=213
Score = 165 bits (417), Expect = 1e-54
Identities = 86/210 (41%), Positives = 134/210 (64%), Gaps = 0/210 (0%)
Query 8 LLITGTIDTLLMVGVSAFLAFLMGLPLAVILVCTSEHGIYPSLKINQPIGWIINITRSIP 67
++ T T +T+ + S LA L+G+P+ + T ++ I + + + + IINI RSIP
Sbjct 4 VVATATYETVYISFASTLLAVLVGVPVGIWTFLTGKNEILQNNRTHFVLNTIINIGRSIP 63
Query 68 FLILMVALIPITRWIVGTSYGVWAAVVPLTLAATPFFARIAEVSLREVDQGLIEAAQAMG 127
F+IL++ L+P+TR+IVGT G AA++PL++ A PF AR+ +L E+ GL EAAQAMG
Sbjct 64 FIILLLILLPVTRFIVGTVLGTTAAIIPLSICAMPFVARLTANALMEIPNGLTEAAQAMG 123
Query 128 CNRKQIIWHVLLPEALPGIVAGFTVTIVTMINSSAIAGAIGAGGLGDIAYRYGYQRFDLT 187
+ QI+ L EALP ++ G T+T+VT++ SA+AG G GGLG +A YG R
Sbjct 124 ATKWQIVRKFYLSEALPTLINGVTLTLVTLVGYSAMAGTQGGGGLGSLAINYGRIRNMPY 183
Query 188 VMFAVILVLIVLVMLIQATGDTLSNQLDKR 217
V + +++++ VM+ Q GDTL+ ++D R
Sbjct 184 VTWVATIIIVLFVMISQKLGDTLAKKVDHR 213
>E0SCY2 Glycine betaine/choline transport system permease protein
OusW [Dickeya dadantii (strain 3937)]
Length=406
Score = 76.3 bits (186), Expect = 1e-19
Identities = 57/196 (29%), Positives = 98/196 (50%), Gaps = 19/196 (10%)
Query 16 TLLMVGVSAFLAFLMGLPLAVILVCTSEHGIYPSLKINQPIGWIINITRSIPFLILMVAL 75
TL +V + F ++GLPL + L + + +I +P+ + T + +LI +V L
Sbjct 197 TLALVLTALFFCVIIGLPLGIWLAHSDR-----AARIVRPLLDAMQTTPAFVYLIPIVML 251
Query 76 IPITRWIVGTSYGVWAAVVPLTLAATPFFARIAEVSLREVDQGLIEAAQAMGCNRKQIIW 135
I G VV + A P R+ + +R+V L+EAAQ+ G + +Q+++
Sbjct 252 FGI---------GNVPGVVVTIIFALPPIIRLTILGIRQVPADLVEAAQSFGASPRQMLF 302
Query 136 HVLLPEALPGIVAGFTVTIVTMINSSAIAGAIGAGGLGDIAYRYGYQRFDLTVM----FA 191
V LP A+P I+AG T++ ++ IA I GGLG + R G R D+ +
Sbjct 303 KVQLPLAMPTIMAGINQTLMLALSMVVIASMIAVGGLGQMVLR-GIGRLDMGLASIGGVG 361
Query 192 VILVLIVLVMLIQATG 207
++++ I+L L Q+ G
Sbjct 362 IVILAIILDRLTQSLG 377
Score = 18.5 bits (36), Expect = 2.1
Identities = 25/95 (26%), Positives = 39/95 (41%), Gaps = 14/95 (15%)
Query 75 LIPITRWIVGTSYGVWAAVVPLTLAATPFFARIAEVSLREVDQGLIEAAQAMGCNRKQII 134
L+P+ RW+ + L L P F I VD L Q + +
Sbjct 110 LVPLDRWVT-------EGIDWLVLHFRPLFQGIRV----PVDMILTSFQQLLTGLPAPVA 158
Query 135 WHVLLPEALPGIVAGFTVTIVTMINSSAIAGAIGA 169
+L+ L V+ F + + T+++ AI GAIGA
Sbjct 159 --ILVFSLLAWQVSSFGMGVATLLSLVAI-GAIGA 190
>P14176 Glycine betaine/proline betaine transport system permease
protein ProW [Escherichia coli (strain K12)]
Length=354
Score = 72.0 bits (175), Expect = 3e-18
Identities = 59/214 (28%), Positives = 102/214 (48%), Gaps = 26/214 (12%)
Query 5 LIDLLITGTID-------TLLMVGVSAFLAFLMGLPLAVILVCTSEHGIYPSLKINQPIG 57
L+ L+ G I TL +V + ++GLPL + L + + KI +P+
Sbjct 130 LVSLIAIGAIGAWSQAMVTLALVLTALLFCIVIGLPLGIWLARSPR-----AAKIIRPLL 184
Query 58 WIINITRSIPFLILMVALIPITRWIVGTSYGVWAAVVPLTLAATPFFARIAEVSLREVDQ 117
+ T + +L+ +V L I G VV + A P R+ + + +V
Sbjct 185 DAMQTTPAFVYLVPIVMLFGI---------GNVPGVVVTIIFALPPIIRLTILGINQVPA 235
Query 118 GLIEAAQAMGCNRKQIIWHVLLPEALPGIVAGFTVTIVTMINSSAIAGAIGAGGLGDIAY 177
LIEA+++ G + +Q+++ V LP A+P I+AG T++ ++ IA I GGLG +
Sbjct 236 DLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALSMVVIASMIAVGGLGQMVL 295
Query 178 RYGYQRFDLTVM----FAVILVLIVLVMLIQATG 207
R G R D+ + ++++ I+L L QA G
Sbjct 296 R-GIGRLDMGLATVGGVGIVILAIILDRLTQAVG 328
>P17327 Glycine betaine/proline betaine transport system permease
protein ProW [Salmonella typhimurium (strain LT2 / SGSC1412
/ ATCC 700720)]
Length=354
Score = 71.6 bits (174), Expect = 4e-18
Identities = 59/214 (28%), Positives = 102/214 (48%), Gaps = 26/214 (12%)
Query 5 LIDLLITGTID-------TLLMVGVSAFLAFLMGLPLAVILVCTSEHGIYPSLKINQPIG 57
LI L+ G I TL +V + ++GLP+ + L + + KI +P+
Sbjct 130 LISLIAIGAIGAWSQAMITLALVLTALLFCVVIGLPMGIWLARSPR-----AAKIVRPLL 184
Query 58 WIINITRSIPFLILMVALIPITRWIVGTSYGVWAAVVPLTLAATPFFARIAEVSLREVDQ 117
+ T + +L+ +V L I G VV + A P R+ + + +V
Sbjct 185 DAMQTTPAFVYLVPIVMLFGI---------GNVPGVVVTIIFALPPIVRLTILGINQVPA 235
Query 118 GLIEAAQAMGCNRKQIIWHVLLPEALPGIVAGFTVTIVTMINSSAIAGAIGAGGLGDIAY 177
LIEA+++ G + +Q+++ V LP A+P I+AG T++ ++ IA I GGLG +
Sbjct 236 DLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALSMVVIASMIAVGGLGQMVL 295
Query 178 RYGYQRFDLTVM----FAVILVLIVLVMLIQATG 207
R G R D+ + ++++ I+L L QA G
Sbjct 296 R-GIGRLDMGLATVGGVGIVILAIILDRLTQAVG 328
Score = 19.6 bits (39), Expect = 0.89
Identities = 12/23 (52%), Positives = 16/23 (70%), Gaps = 1/23 (4%)
Query 147 VAGFTVTIVTMINSSAIAGAIGA 169
V+G + I T+I+ AI GAIGA
Sbjct 120 VSGVGMGIATLISLIAI-GAIGA 141
>Q8ZPK3 Osmoprotectant import permease protein OsmW [Salmonella
typhimurium (strain LT2 / SGSC1412 / ATCC 700720)]
Length=215
Score = 67.0 bits (162), Expect = 5e-17
Identities = 54/191 (28%), Positives = 90/191 (47%), Gaps = 10/191 (5%)
Query 13 TIDTLLMVGVSAFLAFLMGLPLAVILVCTSEHGIYPSLKINQPIGWIINITRSIPFLILM 72
T L +V ++ LA ++G+PL V++V + P+ + +IP + L
Sbjct 18 TFQHLWLVALAVGLAIIIGVPLGVLIVRHKW--------LATPVLGAATLLLTIPSIALF 69
Query 73 VALIPITRWIVGTSYGVWAAVVPLTLAATPFFARIAEVSLREVDQGLIEAAQAMGCNRKQ 132
+IP+ ++G GV AV + L + R +L + GL EA + +G Q
Sbjct 70 GLMIPLFS-LIGHGIGVLPAVTAVFLYSLLPIVRNTHTALDSLPPGLREAGRGIGMTFWQ 128
Query 133 IIWHVLLPEALPGIVAGFTVTIVTMINSSAIAGAIGAGGLGDIAYRYGYQRFDLTVMFAV 192
+ V +P ALP I G +V I AIA IGAGGLG + G D+ ++ A
Sbjct 129 RLRWVEIPMALPVIFGGIRTAVVMNIGVMAIAAVIGAGGLG-LLLLNGISGSDIRMLIAG 187
Query 193 ILVLIVLVMLI 203
L++ +L +++
Sbjct 188 ALMICLLAIVL 198
>Q9KHT8 Carnitine transport permease protein OpuCB [Listeria monocytogenes]
Length=218
Score = 66.6 bits (161), Expect = 7e-17
Identities = 49/186 (26%), Positives = 93/186 (50%), Gaps = 16/186 (9%)
Query 18 LMVGVSA-FLAFLMGLPLAVILVCTSEHGIYPSLKINQPIGWIINITRSIPFLILMVALI 76
L + +SA L + +P ++L S K+ + ++++ +++P L ++ +I
Sbjct 23 LFISLSAVILGIAVAVPTGILLT--------RSPKVANFVIGVVSVLQTVPSLAILAFII 74
Query 77 PITRWIVGTSYGVWAAVVPLTLAATPFFARIAEVSLREVDQGLIEAAQAMGCNRKQIIWH 136
P G A++ L + A R + +R VD+ LIE+ + MG Q+I +
Sbjct 75 PFL------GVGTLPAIIALFIYALLPILRNTFIGVRGVDKNLIESGRGMGMTNWQLIVN 128
Query 137 VLLPEALPGIVAGFTVTIVTMINSSAIAGAIGAGGLGDIAYR-YGYQRFDLTVMFAVILV 195
V +P ++ I+AG ++ V +I + +A IGAGGLGD + R DL + A+ +
Sbjct 129 VEIPNSISVIMAGIRLSAVYVIAWATLASYIGAGGLGDFIFNGLNLYRPDLILGGAIPVT 188
Query 196 LIVLVM 201
++ LV+
Sbjct 189 ILALVV 194
>G2JZ43 Carnitine transport permease protein OpuCB [Listeria monocytogenes
serotype 1/2a (strain 10403S)]
Length=218
Score = 66.6 bits (161), Expect = 7e-17
Identities = 49/186 (26%), Positives = 93/186 (50%), Gaps = 16/186 (9%)
Query 18 LMVGVSA-FLAFLMGLPLAVILVCTSEHGIYPSLKINQPIGWIINITRSIPFLILMVALI 76
L + +SA L + +P ++L S K+ + ++++ +++P L ++ +I
Sbjct 23 LFISLSAVILGIAVAVPTGILLT--------RSPKVANFVIGVVSVLQTVPSLAILAFII 74
Query 77 PITRWIVGTSYGVWAAVVPLTLAATPFFARIAEVSLREVDQGLIEAAQAMGCNRKQIIWH 136
P G A++ L + A R + +R VD+ LIE+ + MG Q+I +
Sbjct 75 PFL------GVGTLPAIIALFIYALLPILRNTFIGVRGVDKNLIESGRGMGMTNWQLIVN 128
Query 137 VLLPEALPGIVAGFTVTIVTMINSSAIAGAIGAGGLGDIAYR-YGYQRFDLTVMFAVILV 195
V +P ++ I+AG ++ V +I + +A IGAGGLGD + R DL + A+ +
Sbjct 129 VEIPNSISVIMAGIRLSAVYVIAWATLASYIGAGGLGDFIFNGLNLYRPDLILGGAIPVT 188
Query 196 LIVLVM 201
++ LV+
Sbjct 189 ILALVV 194
>Q9RR45 Glycine betaine/carnitine transport permease protein GbuB
[Listeria monocytogenes serotype 1/2a (strain 10403S)]
Length=282
Score = 65.9 bits (159), Expect = 3e-16
Identities = 60/213 (28%), Positives = 100/213 (47%), Gaps = 26/213 (12%)
Query 4 QLIDLLITGTID-------TLLMVGVSAFLAFLMGLPLAVILVCTSEHGIYPSLKINQPI 56
+++ LL+ +D TL +V S+ +A ++G+PL + + ++ I S I +P+
Sbjct 77 EVVGLLLIWNLDFWRDMTQTLTLVLTSSLIALVIGVPLGIWM---AKSNIVES--IFKPV 131
Query 57 GWIINITRSIPFLILMVALIPITRWIVGTSYGVWAAVVPLTLAATPFFARIAEVSLREVD 116
+ + +LI VA I G+ VV + A P R+ + +R+V
Sbjct 132 LDFMQTMPAFVYLIPAVAFFGI---------GMVPGVVASVIFAMPPTVRMTNLGIRQVS 182
Query 117 QGLIEAAQAMGCNRKQIIWHVLLPEALPGIVAGFTVTIVTMINSSAIAGAIGAGGLGDIA 176
L+EAA + G Q +W V LP A ++AG +I+ ++ IA IGA GLG
Sbjct 183 TELVEAADSFGSTPWQKLWKVQLPMAKSTMMAGINQSIMLALSMVVIASMIGAMGLGTRV 242
Query 177 YRYGYQRFD----LTVMFAVILVLIVLVMLIQA 205
Y + R D A+++V I+L L QA
Sbjct 243 Y-FAVGRNDAGGGFVAGIAIVIVAIILDRLTQA 274
>Q9KHT6 Carnitine transport permease protein OpuCD [Listeria monocytogenes]
Length=223
Score = 63.5 bits (153), Expect = 1e-15
Identities = 50/164 (30%), Positives = 78/164 (48%), Gaps = 20/164 (12%)
Query 18 LMVGVSAFLAFLMGLPLAVILVCTSEHGIYPSLKINQPIGWII---NITRSIPFLILMVA 74
LM A ++ +PL G+Y + K + GW+I NI ++IP L ++
Sbjct 27 LMSAYGVIFAAIIAIPL----------GVYIARK-KRLAGWVIQIANIIQTIPALAMLAV 75
Query 75 LIPITRWIVGTSYGVWAAVVPLTLAATPFFARIAEVSLREVDQGLIEAAQAMGCNRKQII 134
L+ I G V+ L L + + +R VD L+E+ +AMG + Q++
Sbjct 76 LMLIM------GLGTNTVVLSLFLYSLLPILKNTYTGIRNVDGALLESGKAMGMTKWQVL 129
Query 135 WHVLLPEALPGIVAGFTVTIVTMINSSAIAGAIGAGGLGDIAYR 178
+ +P AL I+AG +V I +AI +GAGGLGDI R
Sbjct 130 RLIEMPLALSVIMAGIRNALVIAIGVAAIGTFVGAGGLGDIIVR 173
Score = 18.9 bits (37), Expect = 1.4
Identities = 18/84 (21%), Positives = 31/84 (37%), Gaps = 0/84 (0%)
Query 16 TLLMVGVSAFLAFLMGLPLAVILVCTSEHGIYPSLKINQPIGWIINITRSIPFLILMVAL 75
+++M G+ L +G+ V G N G I + +IP ++ +
Sbjct 139 SVIMAGIRNALVIAIGVAAIGTFVGAGGLGDIIVRGTNATNGTAIILAGAIPTAVMAILA 198
Query 76 IPITRWIVGTSYGVWAAVVPLTLA 99
+ W+ T V PLT A
Sbjct 199 DVLLGWVERTLNPVKNKRKPLTEA 222
>G2JZ41 Carnitine transport permease protein OpuCD [Listeria monocytogenes
serotype 1/2a (strain 10403S)]
Length=223
Score = 63.5 bits (153), Expect = 1e-15
Identities = 50/164 (30%), Positives = 78/164 (48%), Gaps = 20/164 (12%)
Query 18 LMVGVSAFLAFLMGLPLAVILVCTSEHGIYPSLKINQPIGWII---NITRSIPFLILMVA 74
LM A ++ +PL G+Y + K + GW+I NI ++IP L ++
Sbjct 27 LMSAYGVIFAAIIAIPL----------GVYIARK-KRLAGWVIQIANIIQTIPALAMLAV 75
Query 75 LIPITRWIVGTSYGVWAAVVPLTLAATPFFARIAEVSLREVDQGLIEAAQAMGCNRKQII 134
L+ I G V+ L L + + +R VD L+E+ +AMG + Q++
Sbjct 76 LMLIM------GLGTNTVVLSLFLYSLLPILKNTYTGIRNVDGALLESGKAMGMTKWQVL 129
Query 135 WHVLLPEALPGIVAGFTVTIVTMINSSAIAGAIGAGGLGDIAYR 178
+ +P AL I+AG +V I +AI +GAGGLGDI R
Sbjct 130 RLIEMPLALSVIMAGIRNALVIAIGVAAIGTFVGAGGLGDIIVR 173
Score = 18.9 bits (37), Expect = 1.4
Identities = 18/84 (21%), Positives = 31/84 (37%), Gaps = 0/84 (0%)
Query 16 TLLMVGVSAFLAFLMGLPLAVILVCTSEHGIYPSLKINQPIGWIINITRSIPFLILMVAL 75
+++M G+ L +G+ V G N G I + +IP ++ +
Sbjct 139 SVIMAGIRNALVIAIGVAAIGTFVGAGGLGDIIVRGTNATNGTAIILAGAIPTAVMAILA 198
Query 76 IPITRWIVGTSYGVWAAVVPLTLA 99
+ W+ T V PLT A
Sbjct 199 DVLLGWVERTLNPVKNKRKPLTEA 222
>P9WG11 Phosphate transport system permease protein PstA 1 [Mycobacterium
tuberculosis (strain ATCC 25618 / H37Rv)]
Length=308
Score = 62.8 bits (151), Expect = 4e-15
Identities = 44/149 (30%), Positives = 76/149 (51%), Gaps = 10/149 (7%)
Query 16 TLLMVGVSAFLAFLMGLPLAVILVCTSEHGIYPSLKINQPIGWIINITRSIPFLILMVAL 75
TL+ GV+A LA +GL AV LV Y + ++++ + +++ +P ++ AL
Sbjct 92 TLVQAGVAAVLAVPLGLMTAVYLV------EYGTGRMSRVTTFTVDVLAGVPSIV--AAL 143
Query 76 IPITRWI--VGTSYGVWAAVVPLTLAATPFFARIAEVSLREVDQGLIEAAQAMGCNRKQI 133
+ WI +G +A + L L P R E LR V L EA+ A+G + +
Sbjct 144 FVFSLWIATLGFQQSAFAVALALVLLMLPVVVRAGEEMLRLVPDELREASYALGVPKWKT 203
Query 134 IWHVLLPEALPGIVAGFTVTIVTMINSSA 162
I ++ P A+PGIV+G ++I ++ +A
Sbjct 204 IVRIVAPIAMPGIVSGILLSIARVVGETA 232
Score = 19.2 bits (38), Expect = 1.2
Identities = 30/147 (20%), Positives = 55/147 (37%), Gaps = 22/147 (15%)
Query 68 FLILMVALIPIT---------RWIVGTSYGVWA----AVVPLTLAATPFFARIAEVSLRE 114
F +VALIP+ W T G W V+P A + A +
Sbjct 38 FTSFVVALIPLVWLLWVVIARGWFAVTRSGWWTHSLRGVLPEQFAGGVYHALYGTLV--- 94
Query 115 VDQGLIEAAQAMGCNRKQIIWHVLLPEALPGIVAGFTVTIVTMINSSAIAGAIGAGGLGD 174
Q + A A+ ++ V V FTV ++ + S A + + +
Sbjct 95 --QAGVAAVLAVPLGLMTAVYLVEYGTGRMSRVTTFTVDVLAGVPSIVAALFVFSLWIAT 152
Query 175 IAYRYGYQRFDLTVMFAVILVLIVLVM 201
+ G+Q+ V A++L+++ +V+
Sbjct 153 L----GFQQSAFAVALALVLLMLPVVV 175
Lambda K H a alpha
0.331 0.145 0.436 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 698442
Database: ec432b2d2ee75b6490eea3476ac98c78.SwissProt.fasta
Posted date: May 9, 2024 7:06 AM
Number of letters in database: 4,763
Number of sequences in database: 19
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
