BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: fc5a351be22ea16ca7a4a266cf071203.SwissProt.fasta
           1 sequences; 206 total letters



Query= ACIAD2092

Length=322
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

O34452 TPR repeat-containing protein YrrB [Bacillus subtilis (str...  36.6    2e-07


>O34452 TPR repeat-containing protein YrrB [Bacillus subtilis 
(strain 168)]
Length=206

 Score = 36.6 bits (83),  Expect = 2e-07
 Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 2/73 (3%)

Query  210  SLTYAQRLLKMNPNDAEANFWFGFGLSEGGGQREAMPYLEKAMK--GGVQEAYLVSANNY  267
            +L Y QR +++N ND EA F FG  L+  G   EA+       +   G  +A+  +   Y
Sbjct  111  ALPYLQRAVELNENDTEARFQFGMCLANEGMLDEALSQFAAVTEQDPGHADAFYNAGVTY  170

Query  268  IAMEQKKNAIQTL  280
               E ++ A++ L
Sbjct  171  AYKENREKALEML  183


 Score = 23.5 bits (49),  Expect = 0.003
 Identities = 16/75 (21%), Positives = 37/75 (49%), Gaps = 2/75 (3%)

Query  209  KSLTYAQRLLKMNPNDAEANFWFGFGLSEGGGQREAMPYLEKAMKGGVQ--EAYLVSANN  266
            ++L +  + L+++ + A A +  G         +EA    EKA++ G++  + + +    
Sbjct  42   RALAFYDKALELDSSAATAYYGAGNVYVVKEMYKEAKDMFEKALRAGMENGDLFYMLGTV  101

Query  267  YIAMEQKKNAIQTLK  281
             + +EQ K A+  L+
Sbjct  102  LVKLEQPKLALPYLQ  116


 Score = 18.5 bits (36),  Expect = 0.13
 Identities = 11/56 (20%), Positives = 26/56 (46%), Gaps = 5/56 (9%)

Query  203  GSAYTTKSL-----TYAQRLLKMNPNDAEANFWFGFGLSEGGGQREAMPYLEKAMK  253
            G+ Y  K +        ++ L+    + +  +  G  L +    + A+PYL++A++
Sbjct  65   GNVYVVKEMYKEAKDMFEKALRAGMENGDLFYMLGTVLVKLEQPKLALPYLQRAVE  120



Lambda      K        H        a         alpha
   0.319    0.134    0.391    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 54236


  Database: fc5a351be22ea16ca7a4a266cf071203.SwissProt.fasta
    Posted date:  May 19, 2024  7:03 PM
  Number of letters in database: 206
  Number of sequences in database:  1



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40