BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: 5ede47eb264eb25b63d5e49841af2263.SwissProt.fasta
           1 sequences; 192 total letters



Query= ACIAD2165

Length=127
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

Q9NAH4 Density-regulated protein homolog [Caenorhabditis elegans]     33.1    4e-07


>Q9NAH4 Density-regulated protein homolog [Caenorhabditis elegans]
Length=192

 Score = 33.1 bits (74),  Expect = 4e-07
 Identities = 21/48 (44%), Positives = 25/48 (52%), Gaps = 2/48 (4%)

Query  44   AKHLLETGELEVEEIADDEPKAAPKSGRGGKGGKQNDAATDAAKAAGE  91
            A  LLE  E+  E  AD + K   K  RGGKG K   AA  AA + G+
Sbjct  56   APELLEGLEISDEPAADGDEKKKQK--RGGKGSKTGAAAAQAAASGGK  101


 Score = 21.2 bits (43),  Expect = 0.005
 Identities = 16/47 (34%), Positives = 20/47 (43%), Gaps = 6/47 (13%)

Query  9    GSNAAFVFSGLATFSNGVAALVDEDVHKQLQKNKFAKHLLETGELEV  55
            G  +  V  GLATF       +D  V  +L   KFA     TG  E+
Sbjct  118  GKKSVTVIKGLATFD------IDLKVASKLFAQKFACGSSVTGADEI  158



Lambda      K        H        a         alpha
   0.312    0.128    0.344    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 19250


  Database: 5ede47eb264eb25b63d5e49841af2263.SwissProt.fasta
    Posted date:  May 19, 2024  7:05 PM
  Number of letters in database: 192
  Number of sequences in database:  1



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40