BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: fd5cb02cfd934b1c1f280a57e7a33781.SwissProt.fasta
           2 sequences; 272 total letters



Query= ACIAD2170

Length=184
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

P44193 Uncharacterized protein HI_1422 [Haemophilus influenzae (s...  91.3    6e-28
B8I7T2 Small ribosomal subunit protein bS16 [Ruminiclostridium ce...  32.7    5e-07


>P44193 Uncharacterized protein HI_1422 [Haemophilus influenzae 
(strain ATCC 51907 / DSM 11121 / KW20 / Rd)]
Length=191

 Score = 91.3 bits (225),  Expect = 6e-28
 Identities = 46/107 (43%), Positives = 67/107 (63%), Gaps = 7/107 (7%)

Query  12   LIPVIDGDIGGEVQPCVDARTLHKWLKNGDMFANWIKSRIKTYGFIENEDFALILENTKI  71
            LIPV +G I  +     +AR LH ++++   + +WIK+RI  YGFI++ED+ +I E T  
Sbjct  6    LIPVFNGLIQNQPVQLCNARELHAFVESKQQYTDWIKNRINEYGFIQDEDYLVITERT--  63

Query  72   KKGRGGNRRSVDYLLTLDVAKELSMVENNEQGRIARRYFINCEKVLR  118
                   R   +Y +TLD+ KEL MVE NE+GR  R+YFI CE+ L+
Sbjct  64   -----NGRPRKEYHITLDMGKELGMVERNERGRQIRQYFIRCERTLK  105


>B8I7T2 Small ribosomal subunit protein bS16 [Ruminiclostridium 
cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / 
H10)]
Length=81

 Score = 32.7 bits (73),  Expect = 5e-07
 Identities = 15/35 (43%), Positives = 21/35 (60%), Gaps = 0/35 (0%)

Query  24  VQPCVDARTLHKWLKNGDMFANWIKSRIKTYGFIE  58
           VQ  +DA  + KW+KNG    + +KS +K  G IE
Sbjct  47  VQFKIDAEKVQKWIKNGAQPTDTVKSLLKKQGIIE  81


 Score = 15.0 bits (27),  Expect = 0.95
 Identities = 6/19 (32%), Positives = 11/19 (58%), Gaps = 0/19 (0%)

Query  155  QYKPQAKQKVEELKTKVQP  173
            Q+K  A++  + +K   QP
Sbjct  48   QFKIDAEKVQKWIKNGAQP  66



Lambda      K        H        a         alpha
   0.322    0.138    0.404    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 36936


  Database: fd5cb02cfd934b1c1f280a57e7a33781.SwissProt.fasta
    Posted date:  May 19, 2024  9:06 PM
  Number of letters in database: 272
  Number of sequences in database:  2



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40