BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: 0b50e980591e93ec595377c182819250.SwissProt.fasta
           1 sequences; 447 total letters



Query= ACIAD2173

Length=240
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

P71385 Uncharacterized protein HI_1407 [Haemophilus influenzae (s...  133     5e-41


>P71385 Uncharacterized protein HI_1407 [Haemophilus influenzae 
(strain ATCC 51907 / DSM 11121 / KW20 / Rd)]
Length=447

 Score = 133 bits (335),  Expect = 5e-41
 Identities = 79/240 (33%), Positives = 126/240 (53%), Gaps = 9/240 (4%)

Query  1    VNRRLELYYTRQLLVISKYCQDQTKEIVLPTVGQNIGD------SWITDIFVKLREKLVK  54
            +++R EL+Y +QL    K   +  +  +    G    D      +      +K+ EK  K
Sbjct  24   MSKRTELWYRQQLKQFVKMMTNDVERALQQPQGSFFMDDAKGFQAISAKALMKVLEKYEK  83

Query  55   YT-TQVSRPLATKVVQDSQKEVDAQIAEHTKSIIGVDLTPFYRAS-DIQDVVDTNIAANV  112
               T  +  +A   V     +  A+++ + K+  G+DL+ + R S +I + V+   A N+
Sbjct  84   SDRTSQAENIANGFVSRGDAQNHAEVSTNLKNQTGIDLSAYLRNSPNITEKVNALTAGNI  143

Query  113  ALIKSIPNQYVDKLEALVMNAFQTGQTNEDLAKAIAQLGQSTDSRARLIAADQMGKVNGQ  172
             LIKSI +QY+DK++  VM A   G  N+DLA  I  LG++T+ RA  IA DQ  K+N  
Sbjct  144  QLIKSIRSQYLDKVQNAVMQAMVRGSLNKDLAAQIKDLGKTTEKRAMFIARDQSSKLNAA  203

Query  173  INKARQLSMGVETYVWQTAKDERVRKDHQHKQGKTFRWDDPPTG-GHPGEPIRCRCTALP  231
            + +AR   +G++ Y+W  + DERVR+ H  K G+ F + +PP    HPG    CRC  +P
Sbjct  204  LTQARHEEVGIKKYMWSASLDERVRESHAEKDGQIFEYANPPADTDHPGHDFNCRCVQIP  263


 Score = 13.9 bits (24),  Expect = 6.4
 Identities = 4/7 (57%), Positives = 6/7 (86%), Gaps = 0/7 (0%)

Query  173  INKARQL  179
            +NK +QL
Sbjct  336  VNKLKQL  342



Lambda      K        H        a         alpha
   0.319    0.134    0.390    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 88828


  Database: 0b50e980591e93ec595377c182819250.SwissProt.fasta
    Posted date:  May 19, 2024  10:12 PM
  Number of letters in database: 447
  Number of sequences in database:  1



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40