BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 03c20a7655d7d7478a2ba792d3dcf77c.SwissProt.fasta
22 sequences; 20,004 total letters
Query= ACIAD2185
Length=443
Score E
Sequences producing significant alignments: (Bits) Value
P37469 Replicative DNA helicase [Bacillus subtilis (strain 168)] 179 3e-54
Q6ABX1 Replicative DNA helicase [Leifsonia xyli subsp. xyli (stra... 177 2e-53
P49519 Probable replicative DNA helicase [Trieres chinensis] 176 6e-53
P45256 Replicative DNA helicase [Haemophilus influenzae (strain A... 174 4e-52
P57611 Replicative DNA helicase [Buchnera aphidicola subsp. Acyrt... 172 2e-51
P0ACB1 Replicative DNA helicase [Shigella flexneri] 171 8e-51
Q8FB22 Replicative DNA helicase [Escherichia coli O6:H1 (strain C... 171 8e-51
Q8X5V3 Replicative DNA helicase [Escherichia coli O157:H7] 171 8e-51
P0ACB0 Replicative DNA helicase [Escherichia coli (strain K12)] 171 8e-51
P0A1Q5 Replicative DNA helicase [Salmonella typhi] 171 8e-51
P0A1Q4 Replicative DNA helicase [Salmonella typhimurium (strain L... 171 8e-51
Q8K932 Replicative DNA helicase [Buchnera aphidicola subsp. Schiz... 170 1e-50
Q89A52 Replicative DNA helicase [Buchnera aphidicola subsp. Baizo... 167 2e-49
Q9CNL6 Replicative DNA helicase [Pasteurella multocida (strain Pm... 166 5e-49
Q55418 Replicative DNA helicase [Synechocystis sp. (strain PCC 68... 146 1e-40
P9WMR3 Replicative DNA helicase [Mycobacterium tuberculosis (stra... 139 4e-38
P03006 Replicative DNA helicase [Salmonella phage P22] 127 5e-35
O30477 Replicative DNA helicase [Rhodothermus marinus] 125 2e-33
P0CE16 Probable plasmid replicative DNA helicase [Chlamydia trach... 112 8e-30
B0BCM3 Probable plasmid replicative DNA helicase [Chlamydia trach... 112 8e-30
Q6ZWR6 Nesprin-1 [Mus musculus] 38.5 2e-05
Q5MK06 Macrolide export ATP-binding/permease protein MacB [Neisse... 36.6 5e-05
>P37469 Replicative DNA helicase [Bacillus subtilis (strain 168)]
Length=454
Score = 179 bits (455), Expect = 3e-54
Identities = 139/439 (32%), Positives = 219/439 (50%), Gaps = 16/439 (4%)
Query 10 NIPMEQCVLVALMTFALSYELIAQDLDEGCFYPERHKQIYNAIVELANENQPYDVVMVEQ 69
NI EQ VL A+ + L ++ L FY H++IYNA++ L + +P D+V V
Sbjct 13 NIEAEQAVLGAIFLQPSALTLASEVLIPDDFYRMSHQKIYNAMLVLGDRGEPVDLVTVTS 72
Query 70 RLKSKNLLHVLGGEQYLKIMLAEAPSSFHSMEPYITQLKKLKAHRQVEWLGQRISSMAQD 129
L + +LL +GG YL + P++ ++E Y +++ R+ L + +++AQD
Sbjct 73 ELANTDLLEEVGGISYLTDIANSVPTA-ANIEYYAKIVEEKSILRR---LIRTATTIAQD 128
Query 130 -----TTQPDVFAEAENILGQVDNQEQSDQGMSFEAALDMALTEMIEKAEAKDKQQFTGV 184
D+ +EAE + +V ++ + + + L + + IE+ + K TG+
Sbjct 129 GYTREDEVEDLLSEAEKTIMEVAQRKNTSAFQNIKDVL-VQTYDNIEQLHNR-KGDITGI 186
Query 185 KFNLKHLDELLGTVQKGHFCVVGGRPGSGKSTLAQMLALDTASSFGKGVLFISAEMDQST 244
LD + Q+ +V RP GK+ A +A + A+ + V S EM
Sbjct 187 PTGFTELDRMTAGFQRNDLIIVAARPSVGKTAFALNIAQNVATKTDESVAIFSLEMGAEQ 246
Query 245 LANRMISALGLIPYHNIHNAELYNGLMKDYADAKAAYQRLPIWIQPKQKPSLSEVRSYAR 304
L RM+ A G I N+ L A + I+I +SE+R+ R
Sbjct 247 LVMRMLCAEGNINAQNLRTGNLTEEDWGKLTMAMGSLSNSGIYIDDTPGIRVSEIRAKCR 306
Query 305 RAKRRYKELGCIIVDYLQLLRDP--SKKDRFQEVSSISRELKSMAKEFECPVIALVQLNR 362
R K+ LG I++DYLQL++ SK +R QEVS ISRELKS+A+E + PVIAL QL+R
Sbjct 307 RLKQE-SGLGMILIDYLQLIQGSGRSKDNRQQEVSEISRELKSIARELQVPVIALSQLSR 365
Query 363 --EAEKGKRPKASDIKESGQIEQDADQIILVNPLTDPEDSTKPMGITELIVVKNRHGKRG 420
E + KRP SDI+ESG IEQDAD + + + T+ I E+I+ K R+G G
Sbjct 366 GVEQRQDKRPMMSDIRESGSIEQDADIVAFLYRDDYYDKETENKNIIEIIIAKQRNGPVG 425
Query 421 AVRVLDYLETCRFRSVEEQ 439
V + E +F ++E +
Sbjct 426 TVSLAFVKEYNKFVNLERR 444
>Q6ABX1 Replicative DNA helicase [Leifsonia xyli subsp. xyli (strain
CTCB07)]
Length=457
Score = 177 bits (450), Expect = 2e-53
Identities = 133/421 (32%), Positives = 206/421 (49%), Gaps = 9/421 (2%)
Query 9 HNIPMEQCVLVALMTFALSYELIAQDLDEGCFYPERHKQIYNAIVELANENQPYDVVMVE 68
H++ EQ L ++ + + + + FY +H+ +Y+AI+ L + +P DV+ V
Sbjct 26 HDLLAEQSALGGMLLSKDAVADVVEVVRGTDFYIPKHEIVYDAILSLYSHGEPTDVITVT 85
Query 69 QRLKSKNLLHVLGGEQYLKIMLAEAPSSFHSMEPYITQLKKLKAHRQVEWLGQRISSMAQ 128
L L GG +YL + + P++ ++ +K R VE G RI+ M
Sbjct 86 DELTKLGELSRAGGAEYLHTLTSLVPTAANAGYYANIVAEKALLRRLVE-AGTRITQMGY 144
Query 129 DTTQP--DVFAEAENILGQVDNQEQSDQGMSFEAALDMALTEMIEKAEAKDKQQFTGVKF 186
D+ A+ + V ++ + + A+ +A+ E IE ++ KD TGV
Sbjct 145 KAEGEVLDLVNNAQAEIYSVTGTQEVEDYVPLTEAVTVAIDE-IEASKHKDGSM-TGVPT 202
Query 187 NLKHLDELLGTVQKGHFCVVGGRPGSGKSTLAQMLALDTASSFGKGVLFISAEMDQSTLA 246
LDEL + G +V RP GKSTLA A A +F S EM +S +A
Sbjct 203 GFTELDELTNGLHPGQMIIVAARPALGKSTLALDFARAAAIKHDLPTIFFSLEMGRSEIA 262
Query 247 NRMISALGLIPYHNIHNAELYNGLMKDYADAKAAYQRLPIWIQPKQKPSLSEVRSYARRA 306
R++SA +P ++ + N A + P++I +L E+R+ RR
Sbjct 263 MRLLSAEATVPLQHMRKGTVDNRDWTTIAATRGRINDAPLYIDDSPNMTLVEIRAKCRRL 322
Query 307 KRRYKELGCIIVDYLQLLRDPSK-KDRFQEVSSISRELKSMAKEFECPVIALVQLNR--E 363
K+R L +I+DYLQL+ + + R QEVS SR LK +AKE + PVIAL QLNR E
Sbjct 323 KQRV-GLKMVIIDYLQLMTSGKRVESRQQEVSEFSRALKLLAKELQVPVIALSQLNRGPE 381
Query 364 AEKGKRPKASDIKESGQIEQDADQIILVNPLTDPEDSTKPMGITELIVVKNRHGKRGAVR 423
K P SD++ESG IEQDAD ++L++ + E G +LIV K+R+G V+
Sbjct 382 QRADKLPALSDLRESGSIEQDADVVVLLHRESAYEKDNPRAGEADLIVAKHRNGPTKTVK 441
Query 424 V 424
V
Sbjct 442 V 442
>P49519 Probable replicative DNA helicase [Trieres chinensis]
Length=455
Score = 176 bits (446), Expect = 6e-53
Identities = 123/428 (29%), Positives = 213/428 (50%), Gaps = 19/428 (4%)
Query 9 HNIPMEQCVLVALMTFALSYELIAQDLDEGCFYPERHKQIYNAIVELANENQPYDVVMVE 68
HN E+ VL +L+ + + E + L FY + H++IY AI+ + +N P D+V +
Sbjct 19 HNFLAEKIVLSSLLISSEAIETCLRSLTIDAFYFKNHREIYKAILIMYKKNTPIDIVTLN 78
Query 69 QRLKSKNLLHVLGGEQYLKIMLAEAPSSFHSMEPYITQLKKLKAHRQVEWLGQRI--SSM 126
L+++ LL +GG + L ++ + P+ + +E YI ++ R + LG S
Sbjct 79 TFLQNQGLLPKIGGIKVLIELVNQLPNLVY-LEEYIRIIQDKYVRRSLIKLGYEAINSGY 137
Query 127 AQDTTQPDVFAEAENILGQVDNQEQSDQGMSFEAALDMALTEMIEKAEAKDKQQFTGVKF 186
+ + ++ E + + N+ ++ S ++D+ ++E K G+
Sbjct 138 ITNISLEEILISLEKQMFSLTNEIKNQDVFS---SVDLFSQILLELKYKSSKPVLAGLSS 194
Query 187 NLKHLDELLGTVQKGHFCVVGGRPGSGKSTLAQMLALDTASSFGKGVLFISAEMDQSTLA 246
LD L QK ++ GRP GK+ +A + + +LF S EM + LA
Sbjct 195 GFYDLDSLTQGFQKSDLIIIAGRPSMGKTAFCLNIATNIVKKYKLPILFFSLEMSKEQLA 254
Query 247 NRMISALGLIPYHNIHNAELYNGLMKDYADAKAAYQR---LPIWIQPKQKPSLSEVRSYA 303
R++SA LI + N L KD+ + LP +I S+ +RS
Sbjct 255 YRLLSAEALINPMRLRNGHLNK---KDWLKLHRIIKNLSSLPFFIDDTPNLSIQAIRSKV 311
Query 304 RRAKRRYKELGCIIVDYLQLLRDPSKK--DRFQEVSSISRELKSMAKEFECPVIALVQLN 361
++ +G +++DYLQL++ + K +R QE+S I+R LK++A+EF PVIAL QL+
Sbjct 312 KKLLFEQNTIGLVVIDYLQLMQSSTLKSSNRVQELSQITRSLKNIAREFNVPVIALSQLS 371
Query 362 REAEKG--KRPKASDIKESGQIEQDADQIILV---NPLTDPEDSTKPMGITELIVVKNRH 416
R E KRP SD++ESG IEQDAD ++++ ++ + + ITELI+ K R+
Sbjct 372 RNVENRIIKRPILSDLRESGSIEQDADLVLMLYRDQYYNSNNENDEQLDITELILAKQRN 431
Query 417 GKRGAVRV 424
G G +++
Sbjct 432 GPIGTIQL 439
>P45256 Replicative DNA helicase [Haemophilus influenzae (strain
ATCC 51907 / DSM 11121 / KW20 / Rd)]
Length=468
Score = 174 bits (441), Expect = 4e-52
Identities = 131/443 (30%), Positives = 221/443 (50%), Gaps = 11/443 (2%)
Query 9 HNIPMEQCVLVALMTFALSYELIAQDLDEGCFYPERHKQIYNAIVELANENQPYDVVMVE 68
H+ EQ VL +M ++ IA+ + FY +H+ I+ + L P D++ ++
Sbjct 22 HSTEAEQAVLGGIMLSNQHWDGIAERVIADDFYTFQHRLIFTEMEHLMRNQSPIDLITLD 81
Query 69 QRLKSKNLLHVLGGEQYLKIMLAEAPSSFHSMEPYITQLKKLKAHRQVEWLGQRISSMAQ 128
Q L+S+ + +GG YL + P++ + + Y +++ R++ +G RI+ +
Sbjct 82 QALRSRGVSDEVGGFAYLAELSNNTPNAINILA-YADIVREKAILRELISVGNRIAENSY 140
Query 129 DTTQPDV---FAEAEN-ILGQVDNQEQSDQG-MSFEAALDMALTEMIEKAEAKDKQQFTG 183
D+ EAE + + + S +G + L+ + ++ ++ ++ TG
Sbjct 141 SPKGQDIKLILDEAEREVFAIAEKRTTSSEGPQNVINVLESTIEKIDILSKLENHSGVTG 200
Query 184 VKFNLKHLDELLGTVQKGHFCVVGGRPGSGKSTLAQMLALDTASSFGKGVLFISAEMDQS 243
V LD+ +Q +V RP GK+T A L + A + K VL S EM
Sbjct 201 VTTGFTDLDKKTAGLQPSDLIIVAARPSMGKTTFAMNLCENAAMASEKPVLVFSLEMPAE 260
Query 244 TLANRMISALGLIPYHNIHNAELYNGL-MKDYADAKAAY-QRLPIWIQPKQKPSLSEVRS 301
+ RMI++L + I + + + A + Q+ ++I + ++VRS
Sbjct 261 QIMMRMIASLARVDQTKIRTGQNLDEIEWNKIASVVGMFKQKNNLFIDDSSGLTPTDVRS 320
Query 302 YARRAKRRYKELGCIIVDYLQLLRDPSKKD-RFQEVSSISRELKSMAKEFECPVIALVQL 360
ARR R L I+VDYLQL+R P+ D R E++ ISR LK++AKE + PV+AL QL
Sbjct 321 RARRVYRENGGLSMIMVDYLQLMRAPAFSDNRTLEIAEISRSLKALAKELQVPVVALSQL 380
Query 361 NREAEK--GKRPKASDIKESGQIEQDADQIILVNPLTDPEDSTKPMGITELIVVKNRHGK 418
NR E+ KRP SD++ESG IEQDAD I+ + D+++ G+ E+I+ K R+G
Sbjct 381 NRTLEQRGDKRPVNSDLRESGSIEQDADLIMFIYRDEVYNDNSEDKGVAEIIIGKQRNGP 440
Query 419 RGAVRVLDYLETCRFRSVEEQAE 441
G VR+ + RF ++ EQ E
Sbjct 441 IGRVRLKFNGQFSRFDNLAEQRE 463
>P57611 Replicative DNA helicase [Buchnera aphidicola subsp. Acyrthosiphon
pisum (strain APS)]
Length=459
Score = 172 bits (435), Expect = 2e-51
Identities = 128/428 (30%), Positives = 218/428 (51%), Gaps = 17/428 (4%)
Query 9 HNIPMEQCVLVALMTFALSYELIAQDLDEGCFYPERHKQIYNAIVELANENQPYDVVMVE 68
H++ EQ VL LM ++ +++ + F+ + H+ I+ + +L + P D++ +
Sbjct 19 HSLEAEQSVLGGLMLDNEQWDSVSEHVVADDFFSKPHRLIFQEMQKLLDLGYPIDLITLS 78
Query 69 QRLKSKNLLHVLGGEQYLKIMLAEAPSSFHSMEPYITQLKKLKAHRQVEWLGQRISSMAQ 128
+ L+ K L +G YL + PS+ + + Y +++ R++ + +I++
Sbjct 79 ESLEQKGKLESVGRFSYLAELSKNTPSTAN-ITAYADIVRERAIVREMILVANKIANAGY 137
Query 129 DTT---QPDVFAEAENILGQV-DNQEQSDQG-MSFEAALDMALTEMIEKAEAKDKQQFTG 183
DT ++ AE+ + ++ + + + D G + E LD + IEK TG
Sbjct 138 DTQGRKSEELLDYAESSVFKIAEKRFKKDSGPKNVEQILDETVAS-IEKLFLSPHDGVTG 196
Query 184 VKFNLKHLDELLGTVQKGHFCVVGGRPGSGKSTLAQMLALDTASSFGKGVLFISAEMDQS 243
+ + L++ +Q+ ++ RP GK+T A L + A + K VL S EM
Sbjct 197 INTGYQDLNKKTSGLQRSELIIIAARPSMGKTTFAMNLCENAAMLYDKPVLIFSLEMPGE 256
Query 244 TLANRMISALGLIPYHNIHNAELYNGLMKDYADAKAA----YQRLPIWIQPKQKPSLSEV 299
+ RM+++L + I +L N +D+A ++ I+I + SEV
Sbjct 257 QIMMRMLASLSRVNQARIRTGQLNN---EDWARISGTINILLKKKNIYIDDSSALTPSEV 313
Query 300 RSYARRAKRRYKELGCIIVDYLQLLRDPS-KKDRFQEVSSISRELKSMAKEFECPVIALV 358
RS ARR R L I+VDYLQL+R PS ++R E++ ISR LK++AKE + PVIAL
Sbjct 314 RSRARRIYRENNGLTLIMVDYLQLMRVPSLSENRTLEIAEISRTLKALAKELQVPVIALS 373
Query 359 QLNREAEK--GKRPKASDIKESGQIEQDADQIILVNPLTDPEDSTKPMGITELIVVKNRH 416
QLNR E+ KRP SD++ESG +EQDAD I+ + +++ GI E+I+ K R+
Sbjct 374 QLNRSLEQRSDKRPVNSDLRESGSLEQDADLIMFIYRDEIYNENSDLKGIAEIIIGKQRN 433
Query 417 GKRGAVRV 424
G G VR+
Sbjct 434 GPIGTVRL 441
Score = 20.0 bits (40), Expect = 6.7
Identities = 11/41 (27%), Positives = 21/41 (51%), Gaps = 7/41 (17%)
Query 406 ITELIVVKNRHGKRG-------AVRVLDYLETCRFRSVEEQ 439
+ E+I+V N+ G + +LDY E+ F+ E++
Sbjct 122 VREMILVANKIANAGYDTQGRKSEELLDYAESSVFKIAEKR 162
>P0ACB1 Replicative DNA helicase [Shigella flexneri]
Length=471
Score = 171 bits (432), Expect = 8e-51
Identities = 128/427 (30%), Positives = 210/427 (49%), Gaps = 15/427 (4%)
Query 9 HNIPMEQCVLVALMTFALSYELIAQDLDEGCFYPERHKQIYNAIVELANENQPYDVVMVE 68
H+I EQ VL LM ++ +A+ + FY H+ I+ + L P D++ +
Sbjct 29 HSIEAEQSVLGGLMLDNERWDDVAERVVADDFYTRPHRHIFTEMARLQESGSPIDLITLA 88
Query 69 QRLKSKNLLHVLGGEQYLKIMLAEAPSSFHSMEPYITQLKKLKAHRQVEWLGQRISSMA- 127
+ L+ + L +GG YL + PS+ ++ Y +++ R++ + I+
Sbjct 89 ESLERQGQLDSVGGFAYLAELSKNTPSA-ANISAYADIVRERAVVREMISVANEIAEAGF 147
Query 128 --QDTTQPDVFAEAENILGQV-DNQEQSDQGMSFEAALDMALTEMIEKAEAKDKQQFTGV 184
Q T D+ AE+ + ++ +++ D+G A + A IE+ + TGV
Sbjct 148 DPQGRTSEDLLDLAESRVFKIAESRANKDEGPKNIADVLDATVARIEQLFQQPHDGVTGV 207
Query 185 KFNLKHLDELLGTVQKGHFCVVGGRPGSGKSTLAQMLALDTASSFGKGVLFISAEMDQST 244
L++ +Q +V RP GK+T A L + A K VL S EM
Sbjct 208 NTGYDDLNKKTAGLQPSDLIIVAARPSMGKTTFAMNLVENAAMLQDKPVLIFSLEMPSEQ 267
Query 245 LANRMISALGLIPYHNIHNAELYNGLMKDYADAKAA----YQRLPIWIQPKQKPSLSEVR 300
+ R +++L + I +L + +D+A ++ I+I + +EVR
Sbjct 268 IMMRSLASLSRVDQTKIRTGQLDD---EDWARISGTMGILLEKRNIYIDDSSGLTPTEVR 324
Query 301 SYARRAKRRYKELGCIIVDYLQLLRDPSKKD-RFQEVSSISRELKSMAKEFECPVIALVQ 359
S ARR R + +G I++DYLQL+R P+ D R E++ ISR LK++AKE PV+AL Q
Sbjct 325 SRARRIAREHGGIGLIMIDYLQLMRVPALSDNRTLEIAEISRSLKALAKELNVPVVALSQ 384
Query 360 LNREAEK--GKRPKASDIKESGQIEQDADQIILVNPLTDPEDSTKPMGITELIVVKNRHG 417
LNR E+ KRP SD++ESG IEQDAD I+ + +++ GI E+I+ K R+G
Sbjct 385 LNRSLEQRADKRPVNSDLRESGSIEQDADLIMFIYRDEVYHENSDLKGIAEIIIGKQRNG 444
Query 418 KRGAVRV 424
G VR+
Sbjct 445 PIGTVRL 451
>Q8FB22 Replicative DNA helicase [Escherichia coli O6:H1 (strain
CFT073 / ATCC 700928 / UPEC)]
Length=471
Score = 171 bits (432), Expect = 8e-51
Identities = 128/427 (30%), Positives = 210/427 (49%), Gaps = 15/427 (4%)
Query 9 HNIPMEQCVLVALMTFALSYELIAQDLDEGCFYPERHKQIYNAIVELANENQPYDVVMVE 68
H+I EQ VL LM ++ +A+ + FY H+ I+ + L P D++ +
Sbjct 29 HSIEAEQSVLGGLMLDNERWDDVAERVVADDFYTRPHRHIFTEMARLQESGSPIDLITLA 88
Query 69 QRLKSKNLLHVLGGEQYLKIMLAEAPSSFHSMEPYITQLKKLKAHRQVEWLGQRISSMA- 127
+ L+ + L +GG YL + PS+ ++ Y +++ R++ + I+
Sbjct 89 ESLERQGQLDSVGGFAYLAELSKNTPSA-ANISAYADIVRERAVVREMISVANEIAEAGF 147
Query 128 --QDTTQPDVFAEAENILGQV-DNQEQSDQGMSFEAALDMALTEMIEKAEAKDKQQFTGV 184
Q T D+ AE+ + ++ +++ D+G A + A IE+ + TGV
Sbjct 148 DPQGRTSEDLLDLAESRVFKIAESRANKDEGPKNIADVLDATVARIEQLFQQPHDGVTGV 207
Query 185 KFNLKHLDELLGTVQKGHFCVVGGRPGSGKSTLAQMLALDTASSFGKGVLFISAEMDQST 244
L++ +Q +V RP GK+T A L + A K VL S EM
Sbjct 208 NTGYDDLNKKTAGLQPSDLIIVAARPSMGKTTFAMNLVENAAMLQDKPVLIFSLEMPSEQ 267
Query 245 LANRMISALGLIPYHNIHNAELYNGLMKDYADAKAA----YQRLPIWIQPKQKPSLSEVR 300
+ R +++L + I +L + +D+A ++ I+I + +EVR
Sbjct 268 IMMRSLASLSRVDQTKIRTGQLDD---EDWARISGTMGILLEKRNIYIDDSSGLTPTEVR 324
Query 301 SYARRAKRRYKELGCIIVDYLQLLRDPSKKD-RFQEVSSISRELKSMAKEFECPVIALVQ 359
S ARR R + +G I++DYLQL+R P+ D R E++ ISR LK++AKE PV+AL Q
Sbjct 325 SRARRIAREHGGIGLIMIDYLQLMRVPALSDNRTLEIAEISRSLKALAKELNVPVVALSQ 384
Query 360 LNREAEK--GKRPKASDIKESGQIEQDADQIILVNPLTDPEDSTKPMGITELIVVKNRHG 417
LNR E+ KRP SD++ESG IEQDAD I+ + +++ GI E+I+ K R+G
Sbjct 385 LNRSLEQRADKRPVNSDLRESGSIEQDADLIMFIYRDEVYHENSDLKGIAEIIIGKQRNG 444
Query 418 KRGAVRV 424
G VR+
Sbjct 445 PIGTVRL 451
>Q8X5V3 Replicative DNA helicase [Escherichia coli O157:H7]
Length=471
Score = 171 bits (432), Expect = 8e-51
Identities = 128/427 (30%), Positives = 210/427 (49%), Gaps = 15/427 (4%)
Query 9 HNIPMEQCVLVALMTFALSYELIAQDLDEGCFYPERHKQIYNAIVELANENQPYDVVMVE 68
H+I EQ VL LM ++ +A+ + FY H+ I+ + L P D++ +
Sbjct 29 HSIEAEQSVLGGLMLDNERWDDVAERVVADDFYTRPHRHIFTEMARLQESGSPIDLITLA 88
Query 69 QRLKSKNLLHVLGGEQYLKIMLAEAPSSFHSMEPYITQLKKLKAHRQVEWLGQRISSMA- 127
+ L+ + L +GG YL + PS+ ++ Y +++ R++ + I+
Sbjct 89 ESLERQGQLDSVGGFAYLAELSKNTPSA-ANISSYADIVRERAVVREMISVANEIAEAGF 147
Query 128 --QDTTQPDVFAEAENILGQV-DNQEQSDQGMSFEAALDMALTEMIEKAEAKDKQQFTGV 184
Q T D+ AE+ + ++ +++ D+G A + A IE+ + TGV
Sbjct 148 DPQGRTSEDLLDLAESRVFKIAESRANKDEGPKNIADVLDATVARIEQLFQQPHDGVTGV 207
Query 185 KFNLKHLDELLGTVQKGHFCVVGGRPGSGKSTLAQMLALDTASSFGKGVLFISAEMDQST 244
L++ +Q +V RP GK+T A L + A K VL S EM
Sbjct 208 NTGYDDLNKKTAGLQPSDLIIVAARPSMGKTTFAMNLVENAAMLQDKPVLIFSLEMPSEQ 267
Query 245 LANRMISALGLIPYHNIHNAELYNGLMKDYADAKAA----YQRLPIWIQPKQKPSLSEVR 300
+ R +++L + I +L + +D+A ++ I+I + +EVR
Sbjct 268 IMMRSLASLSRVDQTKIRTGQLDD---EDWARISGTMGILLEKRNIYIDDSSGLTPTEVR 324
Query 301 SYARRAKRRYKELGCIIVDYLQLLRDPSKKD-RFQEVSSISRELKSMAKEFECPVIALVQ 359
S ARR R + +G I++DYLQL+R P+ D R E++ ISR LK++AKE PV+AL Q
Sbjct 325 SRARRIAREHGGIGLIMIDYLQLMRVPALSDNRTLEIAEISRSLKALAKELNVPVVALSQ 384
Query 360 LNREAEK--GKRPKASDIKESGQIEQDADQIILVNPLTDPEDSTKPMGITELIVVKNRHG 417
LNR E+ KRP SD++ESG IEQDAD I+ + +++ GI E+I+ K R+G
Sbjct 385 LNRSLEQRADKRPVNSDLRESGSIEQDADLIMFIYRDEVYHENSDLKGIAEIIIGKQRNG 444
Query 418 KRGAVRV 424
G VR+
Sbjct 445 PIGTVRL 451
>P0ACB0 Replicative DNA helicase [Escherichia coli (strain K12)]
Length=471
Score = 171 bits (432), Expect = 8e-51
Identities = 128/427 (30%), Positives = 210/427 (49%), Gaps = 15/427 (4%)
Query 9 HNIPMEQCVLVALMTFALSYELIAQDLDEGCFYPERHKQIYNAIVELANENQPYDVVMVE 68
H+I EQ VL LM ++ +A+ + FY H+ I+ + L P D++ +
Sbjct 29 HSIEAEQSVLGGLMLDNERWDDVAERVVADDFYTRPHRHIFTEMARLQESGSPIDLITLA 88
Query 69 QRLKSKNLLHVLGGEQYLKIMLAEAPSSFHSMEPYITQLKKLKAHRQVEWLGQRISSMA- 127
+ L+ + L +GG YL + PS+ ++ Y +++ R++ + I+
Sbjct 89 ESLERQGQLDSVGGFAYLAELSKNTPSA-ANISAYADIVRERAVVREMISVANEIAEAGF 147
Query 128 --QDTTQPDVFAEAENILGQV-DNQEQSDQGMSFEAALDMALTEMIEKAEAKDKQQFTGV 184
Q T D+ AE+ + ++ +++ D+G A + A IE+ + TGV
Sbjct 148 DPQGRTSEDLLDLAESRVFKIAESRANKDEGPKNIADVLDATVARIEQLFQQPHDGVTGV 207
Query 185 KFNLKHLDELLGTVQKGHFCVVGGRPGSGKSTLAQMLALDTASSFGKGVLFISAEMDQST 244
L++ +Q +V RP GK+T A L + A K VL S EM
Sbjct 208 NTGYDDLNKKTAGLQPSDLIIVAARPSMGKTTFAMNLVENAAMLQDKPVLIFSLEMPSEQ 267
Query 245 LANRMISALGLIPYHNIHNAELYNGLMKDYADAKAA----YQRLPIWIQPKQKPSLSEVR 300
+ R +++L + I +L + +D+A ++ I+I + +EVR
Sbjct 268 IMMRSLASLSRVDQTKIRTGQLDD---EDWARISGTMGILLEKRNIYIDDSSGLTPTEVR 324
Query 301 SYARRAKRRYKELGCIIVDYLQLLRDPSKKD-RFQEVSSISRELKSMAKEFECPVIALVQ 359
S ARR R + +G I++DYLQL+R P+ D R E++ ISR LK++AKE PV+AL Q
Sbjct 325 SRARRIAREHGGIGLIMIDYLQLMRVPALSDNRTLEIAEISRSLKALAKELNVPVVALSQ 384
Query 360 LNREAEK--GKRPKASDIKESGQIEQDADQIILVNPLTDPEDSTKPMGITELIVVKNRHG 417
LNR E+ KRP SD++ESG IEQDAD I+ + +++ GI E+I+ K R+G
Sbjct 385 LNRSLEQRADKRPVNSDLRESGSIEQDADLIMFIYRDEVYHENSDLKGIAEIIIGKQRNG 444
Query 418 KRGAVRV 424
G VR+
Sbjct 445 PIGTVRL 451
>P0A1Q5 Replicative DNA helicase [Salmonella typhi]
Length=471
Score = 171 bits (432), Expect = 8e-51
Identities = 131/428 (31%), Positives = 213/428 (50%), Gaps = 17/428 (4%)
Query 9 HNIPMEQCVLVALMTFALSYELIAQDLDEGCFYPERHKQIYNAIVELANENQPYDVVMVE 68
H+I EQ VL LM ++ +A+ + FY H+ I+ + L P D++ +
Sbjct 29 HSIEAEQSVLGGLMLDNERWDDVAERVVAEDFYTRPHRHIFTEMGRLQESGSPIDLITLA 88
Query 69 QRLKSKNLLHVLGGEQYLKIMLAEAPSSFHSMEPYITQLKKLKAHRQVEWLGQRISSMAQ 128
+ L+ + L +GG YL + PS+ + + Y +++ R + + I+
Sbjct 89 ESLERQGQLDSVGGFAYLAELSKNTPSAAN-ISAYADIVRERAVVRDMIAVAHEIADAGY 147
Query 129 DT---TQPDVFAEAENILGQV-DNQEQSDQG-MSFEAALDMALTEMIEKAEAKDKQQFTG 183
D ++ AE+ + Q+ +N+ D+G S + LD A IE+ + TG
Sbjct 148 DPQGRNSDELLDLAESRVFQIAENRANKDEGPKSIDQILD-ATVARIEQLFQQPHDGVTG 206
Query 184 VKFNLKHLDELLGTVQKGHFCVVGGRPGSGKSTLAQMLALDTASSFGKGVLFISAEMDQS 243
V + L++ +Q+ +V RP GK+T A L + A K VL S EM
Sbjct 207 VDTGYQDLNKKTAGLQRSDLIIVAARPSMGKTTFAMNLCENAAMLQDKPVLIFSLEMPGE 266
Query 244 TLANRMISALGLIPYHNIHNAELYNGLMKDYADAKAA----YQRLPIWIQPKQKPSLSEV 299
+ RM+++L + I +L + +D+A ++ ++I + +EV
Sbjct 267 QIMMRMLASLSRVDQTRIRTGQLDD---EDWARISGTMGILLEKRNMYIDDSSGLTPTEV 323
Query 300 RSYARRAKRRYKELGCIIVDYLQLLRDPSKKD-RFQEVSSISRELKSMAKEFECPVIALV 358
RS ARR R + L I++DYLQL+R PS D R E++ ISR LK++AKE + PV+AL
Sbjct 324 RSRARRIFREHGGLSLIMIDYLQLMRVPSLSDNRTLEIAEISRSLKALAKELQVPVVALS 383
Query 359 QLNREAEK--GKRPKASDIKESGQIEQDADQIILVNPLTDPEDSTKPMGITELIVVKNRH 416
QLNR E+ KRP SD++ESG IEQDAD I+ + +++ GI E+I+ K R+
Sbjct 384 QLNRSLEQRADKRPVNSDLRESGSIEQDADLIMFIYRDEVYHENSDLKGIAEIIIGKQRN 443
Query 417 GKRGAVRV 424
G G VR+
Sbjct 444 GPIGTVRL 451
>P0A1Q4 Replicative DNA helicase [Salmonella typhimurium (strain
LT2 / SGSC1412 / ATCC 700720)]
Length=471
Score = 171 bits (432), Expect = 8e-51
Identities = 131/428 (31%), Positives = 213/428 (50%), Gaps = 17/428 (4%)
Query 9 HNIPMEQCVLVALMTFALSYELIAQDLDEGCFYPERHKQIYNAIVELANENQPYDVVMVE 68
H+I EQ VL LM ++ +A+ + FY H+ I+ + L P D++ +
Sbjct 29 HSIEAEQSVLGGLMLDNERWDDVAERVVAEDFYTRPHRHIFTEMGRLQESGSPIDLITLA 88
Query 69 QRLKSKNLLHVLGGEQYLKIMLAEAPSSFHSMEPYITQLKKLKAHRQVEWLGQRISSMAQ 128
+ L+ + L +GG YL + PS+ + + Y +++ R + + I+
Sbjct 89 ESLERQGQLDSVGGFAYLAELSKNTPSAAN-ISAYADIVRERAVVRDMIAVAHEIADAGY 147
Query 129 DT---TQPDVFAEAENILGQV-DNQEQSDQG-MSFEAALDMALTEMIEKAEAKDKQQFTG 183
D ++ AE+ + Q+ +N+ D+G S + LD A IE+ + TG
Sbjct 148 DPQGRNSDELLDLAESRVFQIAENRANKDEGPKSIDQILD-ATVARIEQLFQQPHDGVTG 206
Query 184 VKFNLKHLDELLGTVQKGHFCVVGGRPGSGKSTLAQMLALDTASSFGKGVLFISAEMDQS 243
V + L++ +Q+ +V RP GK+T A L + A K VL S EM
Sbjct 207 VDTGYQDLNKKTAGLQRSDLIIVAARPSMGKTTFAMNLCENAAMLQDKPVLIFSLEMPGE 266
Query 244 TLANRMISALGLIPYHNIHNAELYNGLMKDYADAKAA----YQRLPIWIQPKQKPSLSEV 299
+ RM+++L + I +L + +D+A ++ ++I + +EV
Sbjct 267 QIMMRMLASLSRVDQTRIRTGQLDD---EDWARISGTMGILLEKRNMYIDDSSGLTPTEV 323
Query 300 RSYARRAKRRYKELGCIIVDYLQLLRDPSKKD-RFQEVSSISRELKSMAKEFECPVIALV 358
RS ARR R + L I++DYLQL+R PS D R E++ ISR LK++AKE + PV+AL
Sbjct 324 RSRARRIFREHGGLSLIMIDYLQLMRVPSLSDNRTLEIAEISRSLKALAKELQVPVVALS 383
Query 359 QLNREAEK--GKRPKASDIKESGQIEQDADQIILVNPLTDPEDSTKPMGITELIVVKNRH 416
QLNR E+ KRP SD++ESG IEQDAD I+ + +++ GI E+I+ K R+
Sbjct 384 QLNRSLEQRADKRPVNSDLRESGSIEQDADLIMFIYRDEVYHENSDLKGIAEIIIGKQRN 443
Query 417 GKRGAVRV 424
G G VR+
Sbjct 444 GPIGTVRL 451
>Q8K932 Replicative DNA helicase [Buchnera aphidicola subsp. Schizaphis
graminum (strain Sg)]
Length=465
Score = 170 bits (431), Expect = 1e-50
Identities = 125/423 (30%), Positives = 213/423 (50%), Gaps = 11/423 (3%)
Query 9 HNIPMEQCVLVALMTFALSYELIAQDLDEGCFYPERHKQIYNAIVELANENQPYDVVMVE 68
H++ EQ VL LM ++ +++ + F+ + H+ I+ + +L + P D++ +
Sbjct 25 HSLEAEQSVLGGLMLDNEQWDSVSEHVVADDFFSKPHRLIFQEMQQLLDLGHPIDLITLS 84
Query 69 QRLKSKNLLHVLGGEQYLKIMLAEAPSSFHSMEPYITQLKKLKAHRQVEWLGQRISSMAQ 128
+ L+ K L +G YL + PS+ + + Y +++ R++ + +I++
Sbjct 85 ESLEQKGKLESVGRFSYLAELSKNTPSTANIIA-YADIIRERAIVREMILVANKIANAGY 143
Query 129 DTT---QPDVFAEAENILGQV-DNQEQSDQG-MSFEAALDMALTEMIEKAEAKDKQQFTG 183
DT ++ AE+ + ++ + + + D G + E LD +T IEK TG
Sbjct 144 DTQGRKSEELLDYAESSVFKIAEKRFKKDSGPKNIEQILDETVTS-IEKLFLSPNDGVTG 202
Query 184 VKFNLKHLDELLGTVQKGHFCVVGGRPGSGKSTLAQMLALDTASSFGKGVLFISAEMDQS 243
+ + L++ +Q ++ RP GK+T A L + A + K VL S EM
Sbjct 203 INTGYQDLNKKTSGLQPSELIIIAARPSMGKTTFAMNLCENAAMLYDKPVLIFSLEMPGE 262
Query 244 TLANRMISALGLIPYHNIHNAELYN-GLMKDYADAKAAYQRLPIWIQPKQKPSLSEVRSY 302
+ RM+++L + I +L + + ++ I+I + SEVRS
Sbjct 263 QIMMRMLASLSRVNQARIRTGQLNDEDWSRMSGTINVLLKKKNIYIDDSSALTPSEVRSR 322
Query 303 ARRAKRRYKELGCIIVDYLQLLRDPSKKD-RFQEVSSISRELKSMAKEFECPVIALVQLN 361
ARR R K L I+VDYLQL+R PS D R E++ ISR LK++AKE + PVIAL QLN
Sbjct 323 ARRIYRENKGLTLIMVDYLQLMRVPSLSDNRTLEIAEISRTLKALAKELQVPVIALSQLN 382
Query 362 REAEK--GKRPKASDIKESGQIEQDADQIILVNPLTDPEDSTKPMGITELIVVKNRHGKR 419
R E+ KRP SD++ESG +EQDAD I+ + +++ G+ E+I+ K R+G
Sbjct 383 RSLEQRSDKRPVNSDLRESGSLEQDADLIMFIYRDEIYHENSDFKGVAEIIIGKQRNGPI 442
Query 420 GAV 422
G +
Sbjct 443 GTI 445
Score = 20.0 bits (40), Expect = 6.7
Identities = 11/41 (27%), Positives = 21/41 (51%), Gaps = 7/41 (17%)
Query 406 ITELIVVKNRHGKRG-------AVRVLDYLETCRFRSVEEQ 439
+ E+I+V N+ G + +LDY E+ F+ E++
Sbjct 128 VREMILVANKIANAGYDTQGRKSEELLDYAESSVFKIAEKR 168
>Q89A52 Replicative DNA helicase [Buchnera aphidicola subsp. Baizongia
pistaciae (strain Bp)]
Length=463
Score = 167 bits (422), Expect = 2e-49
Identities = 126/442 (29%), Positives = 218/442 (49%), Gaps = 17/442 (4%)
Query 9 HNIPMEQCVLVALMTFALSYELIAQDLDEGCFYPERHKQIYNAIVELANENQPYDVVMVE 68
+++ EQ +L LM ++ I++ + E F+ H+ I+ + L N+ P D++ +
Sbjct 21 NSLEAEQSILGGLMLDNEQWDYISEKISENDFFSLSHQLIFREMKYLLNKGYPIDLITLS 80
Query 69 QRLKSKNLLHVLGGEQYLKIMLAEAPSSFHSMEPYITQLKKLKAHRQVEWLGQRISSMAQ 128
+ L+ K L +G YL + PS+ + + Y +++ R++ + +I
Sbjct 81 ESLEQKGKLEYIGRFAYLAELSKNVPSTAN-ITTYADIVRERSMVRKIIKIANKIIQAGY 139
Query 129 DT---TQPDVFAEAENILGQVDNQE-QSDQG-MSFEAALDMALTEMIEKAEAKDKQQFTG 183
D T ++ AE+ + + Q Q + G + E LD+ L IEK + TG
Sbjct 140 DPRGKTSQELLNLAESKILSISEQNFQKNSGPKNIEELLDITLAN-IEKLFNTPYKGITG 198
Query 184 VKFNLKHLDELLGTVQKGHFCVVGGRPGSGKSTLAQMLALDTASSFGKGVLFISAEMDQS 243
+ + L+ +Q ++ RP GK+T A + + A ++ K VL S EM
Sbjct 199 INTGYQDLNNKTSGLQPSDLIIIAARPSMGKTTFAMNICENIAMTYKKPVLIFSLEMSGE 258
Query 244 TLANRMISALGLIPYHNIHNAELYNGLMKDYADAKAA----YQRLPIWIQPKQKPSLSEV 299
+ RM+S+L + + +L + +D+A + ++ ++I + SE+
Sbjct 259 QIMMRMLSSLSRVNQEKLRTGQLND---EDWARISSTINILLKKKNMYIDDSSTLTPSEM 315
Query 300 RSYARRAKRRYKELGCIIVDYLQLLRDPSK-KDRFQEVSSISRELKSMAKEFECPVIALV 358
RS +R+ R L I+VDYLQL++ PS +R E++ ISR LKS+AKE + P+IAL
Sbjct 316 RSRSRKIYRENNGLSLIMVDYLQLIKVPSLIGNRTLEIAEISRMLKSLAKELKIPIIALS 375
Query 359 QLNR--EAEKGKRPKASDIKESGQIEQDADQIILVNPLTDPEDSTKPMGITELIVVKNRH 416
QLNR E + KRP SD++ESG +EQDAD I+ + + T GI E+I+ K R+
Sbjct 376 QLNRSLEQRRDKRPINSDLRESGSLEQDADLIMFIYRDELYHEHTDLKGIAEIIIGKQRN 435
Query 417 GKRGAVRVLDYLETCRFRSVEE 438
G G +++ RF + E
Sbjct 436 GPIGTIKLTFNGHWSRFDNYSE 457
>Q9CNL6 Replicative DNA helicase [Pasteurella multocida (strain
Pm70)]
Length=467
Score = 166 bits (419), Expect = 5e-49
Identities = 132/446 (30%), Positives = 210/446 (47%), Gaps = 17/446 (4%)
Query 9 HNIPMEQCVLVALMTFALSYELIAQDLDEGCFYPERHKQIYNAIVELANENQPYDVVMVE 68
H++ EQ VL ++ ++ I+ L FY H+ I+ + L + +P D++ +
Sbjct 21 HSLEAEQSVLGGILIHPAHWDSISDMLIADDFYLAAHRVIFQEMENLLRQGKPIDLINLY 80
Query 69 QRLKSKNLLHVLGGEQYLKIMLAEAPSSFHSMEPYITQLKKLKAHRQVEWLGQRISSMAQ 128
+ L+ KNL +GG YL + PS ++ Y ++ R + + ++
Sbjct 81 EFLREKNLSEDVGGFAYLAELSKNTPS-VSNIVSYAAIVRDRAILRDLISVSNDVAQSCY 139
Query 129 DTTQ---PDVFAEAEN-ILGQVDNQEQSDQGMSFEAALDMALTEMIEKAEAKDKQQ---- 180
T D+ EAE + + + S++G A+ L + I++ E K +
Sbjct 140 TTKGMEVKDILDEAERKVFAISEKRTTSNEGPQNICAI---LEKTIDRIELLSKTEGHNG 196
Query 181 FTGVKFNLKHLDELLGTVQKGHFCVVGGRPGSGKSTLAQMLALDTASSFGKGVLFISAEM 240
TGV LD+ +Q +V RP GK+T A L + A K VL S EM
Sbjct 197 ITGVSTGFDALDKKTAGLQPSDLIIVAARPSMGKTTFAMNLCENAALKSDKPVLVFSLEM 256
Query 241 DQSTLANRMISALGLIPYHNIHNAE-LYNGLMKDYADAKAAYQRLP-IWIQPKQKPSLSE 298
+ R +++L + I + L + P ++I + +E
Sbjct 257 PAEQIMMRSLASLSRVDQTKIRTGQGLDQSDWSKIGSTMGLFANKPNLYIDDSSGLTPTE 316
Query 299 VRSYARRAKRRYKELGCIIVDYLQLLRDPSKKD-RFQEVSSISRELKSMAKEFECPVIAL 357
+RS ARR R L I+VDYLQL+R P D R E++ ISR LK++AKE E PVIAL
Sbjct 317 LRSRARRVYRENGGLSLIMVDYLQLMRAPGFADNRTLEIAEISRSLKALAKELEVPVIAL 376
Query 358 VQLNREAEK--GKRPKASDIKESGQIEQDADQIILVNPLTDPEDSTKPMGITELIVVKNR 415
QLNR E KRP SD++ESG IEQDAD I+ + ++++ G+ E+I+ K R
Sbjct 377 SQLNRTLENRADKRPVNSDLRESGSIEQDADLIMFIYRDEVYNENSEDKGVAEIIIGKQR 436
Query 416 HGKRGAVRVLDYLETCRFRSVEEQAE 441
+G G VR+ + RF ++ EQ +
Sbjct 437 NGPIGRVRLAFRGQFSRFDNLAEQRD 462
>Q55418 Replicative DNA helicase [Synechocystis sp. (strain PCC
6803 / Kazusa)]
Length=872
Score = 146 bits (369), Expect = 1e-40
Identities = 107/381 (28%), Positives = 181/381 (48%), Gaps = 10/381 (3%)
Query 10 NIPMEQCVLVALMTFALSYELIAQDLDEGCFYPERHKQIYNAIVELANENQPYDVVMVEQ 69
NI E+C+L ++ + I L FY + H+ IY A++ L ++QP D++ V
Sbjct 11 NIEAEECILGGILLDPEAMGRIIDLLVVDAFYVKAHRLIYEAMLSLHGQSQPTDLMSVSS 70
Query 70 RLKSKNLLHVLGGEQYLKIMLAEAPSSFHSMEPYITQLKKLKAHRQVEWLGQRISSMAQD 129
L+ + +GG L +L S+ + ++ + + RQ+ G I + +
Sbjct 71 WLQDHHHFEAIGGMVKLTQLLDRTISAVN-IDRFAALIMDKYLRRQLIAAGHDIVDLGYE 129
Query 130 TTQP--DVFAEAENILGQVDNQEQSDQGMSFEAALDMALTEMIEKAEAKDKQQFTGVKFN 187
T++ +F E+E ++ QS + + IE + +K GV+
Sbjct 130 TSKELETIFDESEQ---KIFRLTQSRPQAGLVPLSETLVNTFIELDKLHEKLSSPGVETQ 186
Query 188 LKHLDELLGTVQKGHFCVVGGRPGSGKSTLAQMLALDTASSFGKGVLFISAEMDQSTLAN 247
LD + G +Q+ ++ GRP GK+ +A + A + V S EM + LA
Sbjct 187 FYDLDAMTGGLQRADLIILAGRPSMGKTAFGLGIAANIAKNQNLPVAIFSLEMSKEQLAL 246
Query 248 RMISALGLIPYHNIHNAELYNGLMKDYADAKAAYQRLPIWIQPKQKPSLSEVRSYARRAK 307
R++++ LI + + + A LPI+I S++++RS RR +
Sbjct 247 RLVASESLIDSNRLRTGHFSQAEFEPLTAAMGTLSSLPIYIDDTASISVTQMRSQVRRLQ 306
Query 308 RRYK-ELGCIIVDYLQLLRDPSKKDRFQEVSSISRELKSMAKEFECPVIALVQLNR--EA 364
K LG +++DYLQL+ S +R QE+S I+R LK +A+E PVIAL QL+R E+
Sbjct 307 SEQKGPLGMVLIDYLQLMEGGS-DNRVQELSKITRSLKGLAREINAPVIALSQLSRAVES 365
Query 365 EKGKRPKASDIKESGQIEQDA 385
KRP SD++ESG I D+
Sbjct 366 RTNKRPMMSDLRESGCISGDS 386
Score = 41.2 bits (95), Expect = 2e-06
Identities = 23/66 (35%), Positives = 38/66 (58%), Gaps = 0/66 (0%)
Query 372 ASDIKESGQIEQDADQIILVNPLTDPEDSTKPMGITELIVVKNRHGKRGAVRVLDYLETC 431
A+DI IEQDAD I+++ T G+ EL++VK+R+G G V++L E
Sbjct 802 ANDIIVHNSIEQDADLIMMIYRDEYYNPDTPDPGVAELLIVKHRNGPTGVVKLLFKPEFT 861
Query 432 RFRSVE 437
+F +++
Sbjct 862 QFLNLQ 867
>P9WMR3 Replicative DNA helicase [Mycobacterium tuberculosis (strain
ATCC 25618 / H37Rv)]
Length=874
Score = 139 bits (349), Expect = 4e-38
Identities = 107/377 (28%), Positives = 176/377 (47%), Gaps = 11/377 (3%)
Query 10 NIPMEQCVLVALMTFALSYELIAQDLDEGCFYPERHKQIYNAIVELANENQPYDVVMVEQ 69
++ EQ VL ++ + + + L G FY H+ +Y+AI++L +P D V V
Sbjct 27 DLAAEQSVLGGMLLSKDAIADVLERLRPGDFYRPAHQNVYDAILDLYGRGEPADAVTVAA 86
Query 70 RLKSKNLLHVLGGEQYLKIMLAEAPSSFHSMEPYITQLKKLKAHRQVEWLGQRISSM--- 126
L + LL +GG YL +++ P++ ++ +K R VE G R+
Sbjct 87 ELDRRGLLRRIGGAPYLHTLISTVPTAANAGYYASIVAEKALLRRLVE-AGTRVVQYGYA 145
Query 127 -AQDTTQPDVFAEAENILGQVDNQEQSDQGMSFEAALDMALTEMIEKAEAKDKQQFTGVK 185
A+ +V A+ + V ++ S+ ++ E L + E+ A A GV
Sbjct 146 GAEGADVAEVVDRAQAEIYDVADRRLSEDFVALEDLLQPTMDEI--DAIASSGGLARGVA 203
Query 186 FNLKHLDELLGTVQKGHFCVVGGRPGSGKSTLAQMLALDTASSFGKGVLFISAEMDQSTL 245
LDE+ + G +V RPG GKSTL + + S EM +S +
Sbjct 204 TGFTELDEVTNGLHPGQMVIVAARPGVGKSTLGLDFMRSCSIRHRMASVIFSLEMSKSEI 263
Query 246 ANRMISALGLIPYHNIHNAELYNGLMKDYADAKAAYQRLPIWIQPKQKPSLSEVRSYARR 305
R++SA I ++ + + + A + P++I ++ E+R+ ARR
Sbjct 264 VMRLLSAEAKIKLSDMRSGRMSDDDWTRLARRMSEISEAPLFIDDSPNLTMMEIRAKARR 323
Query 306 AKRRYKELGCIIVDYLQLLRDPSK-KDRFQEVSSISRELKSMAKEFECPVIALVQLNR-- 362
+++ L I+VDYLQL+ K + R EVS SR LK +AKE E PV+A+ QLNR
Sbjct 324 LRQK-ANLKLIVVDYLQLMTSGKKYESRQVEVSEFSRHLKLLAKELEVPVVAISQLNRGP 382
Query 363 EAEKGKRPKASDIKESG 379
E K+P +D++ESG
Sbjct 383 EQRTDKKPMLADLRESG 399
Score = 31.2 bits (69), Expect = 0.002
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query 372 ASDIKESGQIEQDADQIILVNPLTDPEDSTKPM-GITELIVVKNRHGKRGAVRVLDYLET 430
A+ I +EQDAD +IL++ D D P G + I+ K+R+G V V L
Sbjct 808 ANGISLHNSLEQDADVVILLH-RPDAFDRDDPRGGEADFILAKHRNGPTKTVTVAHQLHL 866
Query 431 CRFRSV 436
RF ++
Sbjct 867 SRFANM 872
>P03006 Replicative DNA helicase [Salmonella phage P22]
Length=458
Score = 127 bits (319), Expect = 5e-35
Identities = 82/252 (33%), Positives = 128/252 (51%), Gaps = 17/252 (7%)
Query 184 VKFNLKHLDELLGTVQKGHFCVVGGRPGSGKSTLAQMLALDTAS------SFGKGVLFIS 237
+K ++ LD + G + ++ RPG GK+ LA +A AS +GVL S
Sbjct 171 LKTGIEELDAITGGMNAEDLVIIAARPGMGKTELALKIAEGVASRVIPGSGVRRGVLIFS 230
Query 238 AEMDQSTLANRMISALGLIPYHNIHNAELYNGLMKDYADAKAA-----YQRLPIWIQPKQ 292
EM + R I+ G++ + N M D A+ A L +W+
Sbjct 231 MEMSAIQVVERGIAGAGMMSVSVLRNPSR----MDDEGWARVASGMKLLAELDVWVVDAS 286
Query 293 KPSLSEVRSYARRAKRRYKELGCIIVDYLQLLRDPSKKDRFQEVSSISRELKSMAKEFEC 352
+ S+ E+RS + R K+ + L I+ DYL L+ P + ++ IS LK+MAK+ +
Sbjct 287 RLSVEEIRSISERHKQEHPNLSLIMADYLGLIEKPKAERNDLAIAHISGSLKAMAKDLKT 346
Query 353 PVIALVQLNREAEK--GKRPKASDIKESGQIEQDADQIILVNPLTDPEDSTKPMGITELI 410
PVI+L QL+R+ EK KRP +D+++SG IEQDAD II++ ++++ E+I
Sbjct 347 PVISLSQLSRDVEKRPNKRPTNADLRDSGSIEQDADSIIMLYREAVYDENSSAAPFAEII 406
Query 411 VVKNRHGKRGAV 422
V KNR G G V
Sbjct 407 VTKNRFGSLGTV 418
>O30477 Replicative DNA helicase [Rhodothermus marinus]
Length=941
Score = 125 bits (313), Expect = 2e-33
Identities = 113/391 (29%), Positives = 187/391 (48%), Gaps = 31/391 (8%)
Query 11 IPMEQCVLVALMTFALSYELIAQDLDEGCFYPERHKQIYNAIVELANENQPYDVVMVEQR 70
+ +EQ VL A++ + + L FY RH++I+ AIV L +N+ D++ V +
Sbjct 50 VELEQAVLGAMLIEPEAIPRALEILTPEAFYDGRHQRIFRAIVRLFEQNRGVDLLTVTEE 109
Query 71 LKSKNLLHVLGGEQYLKIMLAEAPSSFHSMEPYITQLKKLKAHRQVEWLGQRISSMAQDT 130
L+ L G YL + S+ + +E + + + R +E + +
Sbjct 110 LRRTGELEQAGDTIYLSELTTRVASAAN-VEYHARIIAEKLLRRMIEVMTLLVGRAY--- 165
Query 131 TQPDVFAEAENILGQVDNQ--EQSDQGMSFEA-ALDMALTEMIEKAEAKDKQQ--FTGVK 185
D A+A +L +V+ + SD + A +++ + E +E+ EA + TGV
Sbjct 166 ---DPAADAFELLDEVEAEIFRLSDVHLRKAARSMNEVVKETLERLEAIHGRPGGITGVP 222
Query 186 FNLKHLDELLGTVQKGHFCVVGGRPGSGKSTLAQMLALDTAS---SFGKGVLFISAEMDQ 242
LD L G Q+G ++ RP GK+ A L+ A+ +G GV S EM
Sbjct 223 SGFHQLDALTGGWQRGDLIIIAARPSMGKTAFA--LSCRNAALHPHYGTGVAIFSLEMGA 280
Query 243 STLANRMISALGLIPYHNIHNAELYNGLMKDYADAKAAYQRL---PIWIQPKQKPSLSEV 299
LA R+++A ++ +G + A + L PI+I + E+
Sbjct 281 EQLAQRLLTAEAA----SMPRRPAPDGCATRTGVSWPARRPLSDAPIFIDDTPSLGVLEL 336
Query 300 RSYARRAKRRYKELGCIIVDYLQLLRD---PSKKDRFQEVSSISRELKSMAKEFECPVIA 356
R+ RR K + ++G +IVDYLQL++ P +R QE++ ISR LK++AKE PV+A
Sbjct 337 RAKCRRLKAEH-DIGLVIVDYLQLMQASHMPRNANREQEIAQISRSLKALAKELNVPVVA 395
Query 357 LVQLNREAEK---GKRPKASDIKESGQIEQD 384
L QL+R E KRP+ SD++ESG + D
Sbjct 396 LSQLSRAVETRGGDKRPQLSDLRESGCLAGD 426
Score = 38.9 bits (89), Expect = 1e-05
Identities = 26/77 (34%), Positives = 39/77 (51%), Gaps = 6/77 (8%)
Query 372 ASDIKESGQIEQDADQIILVNP-----LTDPEDSTKPMGITELIVVKNRHGKRGAVRVLD 426
A+DI IEQDAD ++ + +T E+ GI E+I+ K R+G G VR+
Sbjct 842 ANDIIAHNSIEQDADVVLFIYRPERYGITVDENGNPTEGIAEIIIGKQRNGPTGTVRLAF 901
Query 427 YLETCRFRSVE-EQAEP 442
+ RF ++ Q EP
Sbjct 902 INQYARFENLTMYQPEP 918
>P0CE16 Probable plasmid replicative DNA helicase [Chlamydia trachomatis]
Length=451
Score = 112 bits (280), Expect = 8e-30
Identities = 108/425 (25%), Positives = 190/425 (45%), Gaps = 30/425 (7%)
Query 13 MEQCVLVALMTFALSYELIAQDLDEGCFYPERHKQIYNAIVELANENQPYDVVMVEQRLK 72
+E +L + F S E I + L F HK I+ L + P V + L
Sbjct 14 IEYALLGKALIFEDSTEYILRQLANYEFKCSHHKNIFIVFKYLKDNGLPITVDSAWEELL 73
Query 73 SKNLLHVLGGEQYLKIMLAEAPSSFH----SMEPYITQLKKLKAHRQVE-WLGQRISSMA 127
+ + + + YL +ML +A S+ S ++ L A + ++ + +
Sbjct 74 RRRIKDM--DKSYLGLMLHDALSNDKLRSVSHTVFLDDLSVCSAEENLSNFIFRSFNEYN 131
Query 128 QDTTQPDVFAEAENILGQVDN------QEQSDQGMSFE---AALDMALTEMIEKAEAKDK 178
++ + F E I G++D+ +S +G S + ++ + I+K A
Sbjct 132 ENPLRRSPFLLLERIKGRLDSAIAKTFSIRSARGRSIYDIFSQSEIGVLARIKKRRATFS 191
Query 179 QQ----FTGVKFNLKHLDELLGTVQKGHFCVVGGRPGSGKSTLAQMLALDTASSFGKGVL 234
+ F K +D+ + KG+F ++ RP GK+ LA +A++ A + + V
Sbjct 192 ENQNSFFDAFPTGYKDIDDKGVILAKGNFVIIAARPSIGKTALAIDMAINLAVTQQRRVG 251
Query 235 FISAEMDQSTLANRMISALGLIPYHNIHNAELYNGLMKDYADAKAAYQRLPIWIQPKQKP 294
F+S EM + R+I+ L I + +L + +A + +I +
Sbjct 252 FLSLEMSAGQIVERIIANLTGISGEKLQRGDLSKEELFRVEEAGETVRESHFYICSDSQY 311
Query 295 SLSEVRSYARRAKRRYKELGCIIVDYLQLLRDPSKKDRFQEVSSISRELKSMAKEFECPV 354
L+ + + R R+ + I +DYLQL+ ++R E++ ISR L+ +A E P+
Sbjct 312 KLNLIANQIRLL-RKEDRVDVIFIDYLQLINSSVGENRQNEIADISRTLRGLASELNIPI 370
Query 355 IALVQLNREAE--KGKRPKASDIKESGQIEQDADQIILVNPLTDPEDSTKPMGITELIVV 412
+ L QL+R+ E K P SD+++SGQIEQDAD I+ +N E S+ E+ V
Sbjct 371 VCLSQLSRKVEDRANKVPMLSDLRDSGQIEQDADVILFIN---RKESSSN----CEITVG 423
Query 413 KNRHG 417
KNRHG
Sbjct 424 KNRHG 428
>B0BCM3 Probable plasmid replicative DNA helicase [Chlamydia trachomatis
serovar L2 (strain 434/Bu / ATCC VR-902B)]
Length=451
Score = 112 bits (280), Expect = 8e-30
Identities = 108/425 (25%), Positives = 190/425 (45%), Gaps = 30/425 (7%)
Query 13 MEQCVLVALMTFALSYELIAQDLDEGCFYPERHKQIYNAIVELANENQPYDVVMVEQRLK 72
+E +L + F S E I + L F HK I+ L + P V + L
Sbjct 14 IEYALLGKALIFEDSTEYILRQLANYEFKCSHHKNIFIVFKYLKDNGLPITVDSAWEELL 73
Query 73 SKNLLHVLGGEQYLKIMLAEAPSSFH----SMEPYITQLKKLKAHRQVE-WLGQRISSMA 127
+ + + + YL +ML +A S+ S ++ L A + ++ + +
Sbjct 74 RRRIKDM--DKSYLGLMLHDALSNDKLRSVSHTVFLDDLSVCSAEENLSNFIFRSFNEYN 131
Query 128 QDTTQPDVFAEAENILGQVDN------QEQSDQGMSFE---AALDMALTEMIEKAEAKDK 178
++ + F E I G++D+ +S +G S + ++ + I+K A
Sbjct 132 ENPLRRSPFLLLERIKGRLDSAIAKTFSIRSARGRSIYDIFSQSEIGVLARIKKRRATFS 191
Query 179 QQ----FTGVKFNLKHLDELLGTVQKGHFCVVGGRPGSGKSTLAQMLALDTASSFGKGVL 234
+ F K +D+ + KG+F ++ RP GK+ LA +A++ A + + V
Sbjct 192 ENQNSFFDAFPTGYKDIDDKGVILAKGNFVIIAARPSIGKTALAIDMAINLAVTQQRRVG 251
Query 235 FISAEMDQSTLANRMISALGLIPYHNIHNAELYNGLMKDYADAKAAYQRLPIWIQPKQKP 294
F+S EM + R+I+ L I + +L + +A + +I +
Sbjct 252 FLSLEMSAGQIVERIIANLTGISGEKLQRGDLSKEELFRVEEAGETVRESHFYICSDSQY 311
Query 295 SLSEVRSYARRAKRRYKELGCIIVDYLQLLRDPSKKDRFQEVSSISRELKSMAKEFECPV 354
L+ + + R R+ + I +DYLQL+ ++R E++ ISR L+ +A E P+
Sbjct 312 KLNLIANQIRLL-RKEDRVDVIFIDYLQLINSSVGENRQNEIADISRTLRGLASELNIPI 370
Query 355 IALVQLNREAE--KGKRPKASDIKESGQIEQDADQIILVNPLTDPEDSTKPMGITELIVV 412
+ L QL+R+ E K P SD+++SGQIEQDAD I+ +N E S+ E+ V
Sbjct 371 VCLSQLSRKVEDRANKVPMLSDLRDSGQIEQDADVILFIN---RKESSSN----CEITVG 423
Query 413 KNRHG 417
KNRHG
Sbjct 424 KNRHG 428
>Q6ZWR6 Nesprin-1 [Mus musculus]
Length=8799
Score = 38.5 bits (88), Expect = 2e-05
Identities = 78/349 (22%), Positives = 142/349 (41%), Gaps = 65/349 (19%)
Query 55 LANENQPYDVVMVEQRLKSKNLLHVLG--------GEQYLKIM------LAEAPSSFHSM 100
L + Q Y + E R++ N+++ L +++LK M +E SS
Sbjct 3573 LRQDWQVYQHRLAEARMQLNNVVNKLRLMEQKFQQADEWLKRMEEKINFRSECQSSRSDK 3632
Query 101 EPYITQLKK----LKAHR-QVEWLGQRISSMAQDT--------TQPDVFAEAENILGQVD 147
E + QLKK L AHR +VE +G R + +T + + + +L QV
Sbjct 3633 EIQLLQLKKWHEDLSAHRDEVEEVGTRAQGILDETHISSRMGCQATQLTSRYQALLLQVL 3692
Query 148 NQ-----------EQSDQGMSFEAALDMALTEMIEKAEAK-DKQQFTGVKFNLKHLDELL 195
Q E+++ +S + + + + K DK + + LK L+ LL
Sbjct 3693 EQIKFFEEELQCLEETESSLSSYSDWYGSTHKNFKNVATKIDKVDESMMGKKLKTLEVLL 3752
Query 196 GTVQKGHFCVVGGRPGSGKSTLAQMLALDTASSFGKGVLFISAEMDQSTLANRMISALGL 255
++KGH + R ++ + LA A + K I M+Q + +
Sbjct 3753 KDMEKGHSLLKSAREKGERAM--KFLAEHEAEALRKE---IHTYMEQLKNLTSTVRKECM 3807
Query 256 IPYHNIHNAELYNGLMKDYADAKAAYQRLPIWIQPKQKPSLSEVRSYARRAK-RRYKELG 314
+H A+ ++ K A A YQ + P ++ Y ++A+ +YK L
Sbjct 3808 SLEKGLHLAKEFSDKYKVLAQWMAEYQEILC------TPEEPKMELYEKKAQLSKYKSLQ 3861
Query 315 CIIVDY--------------LQLLRDPSKKDRFQEVSSISRELKSMAKE 349
+++ + L+L++D S KD+ Q++ S ++L S AKE
Sbjct 3862 QMVLSHEPSVTSVQEKSEALLELVQDQSLKDKIQKLQSDFQDLCSRAKE 3910
Score = 28.5 bits (62), Expect = 0.018
Identities = 36/159 (23%), Positives = 69/159 (43%), Gaps = 35/159 (22%)
Query 313 LGCII-----VDYLQLLRDPSKKDRFQEVSSISRELK---------------SMAKEFEC 352
LGC++ +D + R K+R Q++ +LK +A FE
Sbjct 6461 LGCLLGRLSLLDSVVDQRCHQMKERLQQILRFQNDLKVLFTSLADSKYIILQKLANVFEQ 6520
Query 353 PVIALVQLNREAEKGKRPKASDIKE------SGQIEQDADQIILVNPLTDPED------S 400
P++ +Q ++AE+G R I E Q+EQ A Q + + L D D S
Sbjct 6521 PIVEQMQAIQQAEEGLRDLEGGISELKRWADKLQVEQSAVQEL--SKLQDMYDELLMTVS 6578
Query 401 TKPMGITELIVVKNRHGKRGAVRVLDYLETCRFRSVEEQ 439
++ + + + +K+++ K ++D L+T + + +Q
Sbjct 6579 SRRSSLHQNLALKSQYDK-ALQDLVDLLDTGQEKMTGDQ 6616
Score = 22.7 bits (47), Expect = 1.1
Identities = 21/98 (21%), Positives = 43/98 (44%), Gaps = 7/98 (7%)
Query 63 DVVMVEQRLKSKNLLHVLGGE-QYLKIMLAEAPSSFHSMEPYITQLKKLKAHRQVEWLGQ 121
+ + E++LK + H L G Q I+L + + P++ KA QV+ +
Sbjct 4805 ETLPAEEKLK---VYHSLAGSLQDSGILLKRVATHLEDLSPHLDPTAYEKAKSQVQSWQE 4861
Query 122 RISSMAQDTTQPDVFAEAENILGQ-VDNQEQSDQGMSF 158
+ M D ++ E E+ + Q +D Q + + + +
Sbjct 4862 ELKQMTSDV--GELVTECESRMVQSIDFQTEMSRSLDW 4897
Score = 22.3 bits (46), Expect = 1.4
Identities = 15/61 (25%), Positives = 25/61 (41%), Gaps = 5/61 (8%)
Query 299 VRSYARRAKRRYKELGCIIVDYLQL-----LRDPSKKDRFQEVSSISRELKSMAKEFECP 353
+ A K +Y L ++ + L D D+ QE E K+M++EF C
Sbjct 5372 IEKIAEEQKNKYLGLYTVLPSEISLQLAEVALDLKIHDQIQEKVQEIEEGKAMSQEFSCK 5431
Query 354 V 354
+
Sbjct 5432 I 5432
Score = 22.3 bits (46), Expect = 1.4
Identities = 23/112 (21%), Positives = 51/112 (46%), Gaps = 14/112 (13%)
Query 90 LAEAPSSFHSMEPYITQLKKLKAHRQVEWLGQRISSMAQDTTQPDVFAEAENILGQVDNQ 149
+ +A +E I++LK+ QVE + S QD + +L V ++
Sbjct 6529 IQQAEEGLRDLEGGISELKRWADKLQVEQSAVQELSKLQDM--------YDELLMTVSSR 6580
Query 150 EQS-DQGMSFEAALDMALTEMIEKAEAKDKQQFTG----VKFNLKHLDELLG 196
S Q ++ ++ D AL ++++ + +++ TG + + + + +LLG
Sbjct 6581 RSSLHQNLALKSQYDKALQDLVDLLDT-GQEKMTGDQKIIVCSKEEIQQLLG 6631
Score = 21.9 bits (45), Expect = 1.9
Identities = 17/64 (27%), Positives = 35/64 (55%), Gaps = 9/64 (14%)
Query 67 VEQRLKSKNLLHVLGGEQYLKIMLAEAPSSFHSMEPYITQLKKLKAHRQVEWLGQRISSM 126
+E+RLK++NL GE K ++E + +E ++ +L L A ++ L QR +
Sbjct 2532 MEERLKTENL-----GES--KHHISEKKNEVRKVEMFLGEL--LAARESLDKLSQRGQLL 2582
Query 127 AQDT 130
++++
Sbjct 2583 SEES 2586
Score = 20.4 bits (41), Expect = 5.6
Identities = 29/147 (20%), Positives = 64/147 (44%), Gaps = 23/147 (16%)
Query 45 HKQIYNAIVELANE--NQPYDVVMVEQRLK------SKNLLHVLGGEQYLKIMLAEAPSS 96
H ++ + + E+ N+ + + ++ RLK S+N G E LAE SS
Sbjct 1160 HDEVKHMVDEIRNDITKKGESLSWLKSRLKYLIDISSENEAQKRGDE------LAELSSS 1213
Query 97 FHSMEPYITQLKKLKA-------HRQV--EWLGQRISSMAQDTTQPDVFAEAENILGQVD 147
F ++ +++++KL + ++++ L IS + + ++ +++N+L
Sbjct 1214 FKALVALLSEVEKLLSNFGECVQYKEIVKSSLEGLISGPQESKEEAEMILDSKNLLEAQQ 1273
Query 148 NQEQSDQGMSFEAALDMALTEMIEKAE 174
Q +A L E +E+A+
Sbjct 1274 LLLHHQQKTKMISAKKRDLQEQMEQAQ 1300
>Q5MK06 Macrolide export ATP-binding/permease protein MacB [Neisseria
gonorrhoeae]
Length=644
Score = 36.6 bits (83), Expect = 5e-05
Identities = 23/57 (40%), Positives = 34/57 (60%), Gaps = 2/57 (4%)
Query 174 EAKDKQQFTGVKFNLKH-LDELLGTVQKGHFCVVGGRPGSGKSTLAQML-ALDTASS 228
E K+ ++ G N H L ++ +++KG F + G+ GSGKSTL +L LDTA S
Sbjct 5 ECKNINRYFGSGENRVHILKDISLSIEKGDFVAIIGQSGSGKSTLMNILGCLDTAGS 61
Lambda K H a alpha
0.318 0.133 0.378 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 7183104
Database: 03c20a7655d7d7478a2ba792d3dcf77c.SwissProt.fasta
Posted date: May 8, 2024 2:14 PM
Number of letters in database: 20,004
Number of sequences in database: 22
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
Loading
Data ...
