Comparative Genomics

ACIAD2188 / TrEMBL Alignments

BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: c58332e70d4725dc50aba6f3184bfcfd.TrEMBL.fasta
           9 sequences; 1,353 total letters



Query= ACIAD2188

Length=150
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

Q6FAC6 Putative bacteriophage protein (Gp55-like) [Acinetobacter ...  298     9e-110
A0A7G2SE18 Uncharacterized protein [Acinetobacter sp]                 296     5e-109
A0A1E7R936 Phage regulatory CII family protein [Acinetobacter qin...  254     2e-92 
A0A2N0WET8 Bacteriophage protein (Gp55-like) [Acinetobacter prote...  231     3e-83 
N9KBD7 Phage regulatory protein CII (CP76) [Acinetobacter sp. ANC...  230     6e-83 
A0A829HCI1 Phage regulatory protein CII [Acinetobacter gyllenberg...  229     9e-83 
A0A653K9Y8 Putative bacteriophage protein (Gp55-like) [Acinetobac...  228     3e-82 
N9RQY2 Phage regulatory protein CII (CP76) [Acinetobacter sp. NIP...  226     3e-81 
A0A1Z9YXX0 Transcriptional regulator [Acinetobacter populi]           221     2e-79 


>Q6FAC6 Putative bacteriophage protein (Gp55-like) [Acinetobacter 
baylyi (strain ATCC 33305 / BD413 / ADP1)]
Length=149

 Score = 298 bits (762),  Expect = 9e-110
 Identities = 149/149 (100%), Positives = 149/149 (100%), Gaps = 0/149 (0%)

Query  1    MNILDAAYHTVHDFLGGASALASRLGIKSPAVLNSKVNPNTHTHHITLLEAVKLMEITGD  60
            MNILDAAYHTVHDFLGGASALASRLGIKSPAVLNSKVNPNTHTHHITLLEAVKLMEITGD
Sbjct  1    MNILDAAYHTVHDFLGGASALASRLGIKSPAVLNSKVNPNTHTHHITLLEAVKLMEITGD  60

Query  61   YRILQEMCARLGKVAIDLPDIPESQRDTSLMDTFLCIGIKKGDISALFKEMMADGRITQG  120
            YRILQEMCARLGKVAIDLPDIPESQRDTSLMDTFLCIGIKKGDISALFKEMMADGRITQG
Sbjct  61   YRILQEMCARLGKVAIDLPDIPESQRDTSLMDTFLCIGIKKGDISALFKEMMADGRITQG  120

Query  121  EALDMARVIHEMHKALSELNQQVQSCVHP  149
            EALDMARVIHEMHKALSELNQQVQSCVHP
Sbjct  121  EALDMARVIHEMHKALSELNQQVQSCVHP  149


>A0A7G2SE18 Uncharacterized protein [Acinetobacter sp]
Length=149

 Score = 296 bits (757),  Expect = 5e-109
 Identities = 148/149 (99%), Positives = 148/149 (99%), Gaps = 0/149 (0%)

Query  1    MNILDAAYHTVHDFLGGASALASRLGIKSPAVLNSKVNPNTHTHHITLLEAVKLMEITGD  60
            MNILDAAYHTVHDFLGGASALASRLGIKSPAVLNSKVNPNTHTHHITLLEAVKLMEITGD
Sbjct  1    MNILDAAYHTVHDFLGGASALASRLGIKSPAVLNSKVNPNTHTHHITLLEAVKLMEITGD  60

Query  61   YRILQEMCARLGKVAIDLPDIPESQRDTSLMDTFLCIGIKKGDISALFKEMMADGRITQG  120
            YRILQEMCARLGKVAIDLPDIPESQRDTSLMDTFLCIGIKKGDISALFKEMMADGRITQG
Sbjct  61   YRILQEMCARLGKVAIDLPDIPESQRDTSLMDTFLCIGIKKGDISALFKEMMADGRITQG  120

Query  121  EALDMARVIHEMHKALSELNQQVQSCVHP  149
            EALDMAR IHEMHKALSELNQQVQSCVHP
Sbjct  121  EALDMARFIHEMHKALSELNQQVQSCVHP  149


>A0A1E7R936 Phage regulatory CII family protein [Acinetobacter 
qingfengensis]
Length=149

 Score = 254 bits (648),  Expect = 2e-92
 Identities = 125/148 (84%), Positives = 140/148 (95%), Gaps = 0/148 (0%)

Query  1    MNILDAAYHTVHDFLGGASALASRLGIKSPAVLNSKVNPNTHTHHITLLEAVKLMEITGD  60
            MNILDAAY+TVHD+ GGASALA R+GIKSPAVLNSKVNPNTHTHHITLLEAVKLMEITGD
Sbjct  1    MNILDAAYNTVHDYKGGASALAPRMGIKSPAVLNSKVNPNTHTHHITLLEAVKLMEITGD  60

Query  61   YRILQEMCARLGKVAIDLPDIPESQRDTSLMDTFLCIGIKKGDISALFKEMMADGRITQG  120
            YRILQEMCARLGKVAIDLPDIPES+RDTSLMDTFL + I KG++S  F+EMMADGRITQG
Sbjct  61   YRILQEMCARLGKVAIDLPDIPESKRDTSLMDTFLYLAIHKGNVSKAFREMMADGRITQG  120

Query  121  EALDMARVIHEMHKALSELNQQVQSCVH  148
            EALDM+RVIHEMH AL++L++QVQSC++
Sbjct  121  EALDMSRVIHEMHVALAKLDKQVQSCMN  148


>A0A2N0WET8 Bacteriophage protein (Gp55-like) [Acinetobacter proteolyticus]
Length=150

 Score = 231 bits (588),  Expect = 3e-83
 Identities = 111/147 (76%), Positives = 130/147 (88%), Gaps = 0/147 (0%)

Query  1    MNILDAAYHTVHDFLGGASALASRLGIKSPAVLNSKVNPNTHTHHITLLEAVKLMEITGD  60
            MNILDAAYHTVHDF GGA+ALASR+GIKSPAVLNSKVNPNT THH+TL EA KLM ITGD
Sbjct  1    MNILDAAYHTVHDFKGGANALASRMGIKSPAVLNSKVNPNTETHHLTLFEASKLMGITGD  60

Query  61   YRILQEMCARLGKVAIDLPDIPESQRDTSLMDTFLCIGIKKGDISALFKEMMADGRITQG  120
            +RILQ +CA  GK AIDLPDIPES+RD+ LMDTFL +GIKKG++S  F+EM+ADGRITQG
Sbjct  61   FRILQAICAEHGKAAIDLPDIPESKRDSCLMDTFLNLGIKKGNVSKQFREMLADGRITQG  120

Query  121  EALDMARVIHEMHKALSELNQQVQSCV  147
            EA+DMA+VIHEMH  L+ L QQ+++C+
Sbjct  121  EAIDMAKVIHEMHVLLATLEQQIKACI  147


>N9KBD7 Phage regulatory protein CII (CP76) [Acinetobacter sp. 
ANC 3929]
Length=150

 Score = 230 bits (586),  Expect = 6e-83
 Identities = 111/147 (76%), Positives = 130/147 (88%), Gaps = 0/147 (0%)

Query  1    MNILDAAYHTVHDFLGGASALASRLGIKSPAVLNSKVNPNTHTHHITLLEAVKLMEITGD  60
            MNILDAAYHTVHDF GGA+ALASR+GIKSPAVLNSKVNPNT THH+TLLEA KLM ITGD
Sbjct  1    MNILDAAYHTVHDFKGGANALASRMGIKSPAVLNSKVNPNTETHHLTLLEASKLMGITGD  60

Query  61   YRILQEMCARLGKVAIDLPDIPESQRDTSLMDTFLCIGIKKGDISALFKEMMADGRITQG  120
            +RILQ +CA  GK AIDLPDIPES+RD+ LMDTFL IGIKKG++S  F+EM+ADGRIT+G
Sbjct  61   FRILQAICAEHGKAAIDLPDIPESKRDSCLMDTFLNIGIKKGNVSKQFREMLADGRITKG  120

Query  121  EALDMARVIHEMHKALSELNQQVQSCV  147
            EA+DMA+VIH+MH  L+ L QQ+ +C+
Sbjct  121  EAIDMAKVIHDMHVLLATLEQQIHACI  147


>A0A829HCI1 Phage regulatory protein CII [Acinetobacter gyllenbergii 
CIP 110306 = MTCC 11365]
Length=150

 Score = 229 bits (585),  Expect = 9e-83
 Identities = 111/147 (76%), Positives = 129/147 (88%), Gaps = 0/147 (0%)

Query  1    MNILDAAYHTVHDFLGGASALASRLGIKSPAVLNSKVNPNTHTHHITLLEAVKLMEITGD  60
            MNILDAAYHTVHDF GGA+ALA+R+GIKSPAVLNSKVNPNT THH+TLLEA KLM ITGD
Sbjct  1    MNILDAAYHTVHDFKGGANALAARMGIKSPAVLNSKVNPNTETHHLTLLEASKLMGITGD  60

Query  61   YRILQEMCARLGKVAIDLPDIPESQRDTSLMDTFLCIGIKKGDISALFKEMMADGRITQG  120
            +RILQ +CA  GK AIDLPDIPE +RD+ LMDTFL IGIKKG++S  F+EM+ADGRITQG
Sbjct  61   FRILQAICAEHGKAAIDLPDIPECKRDSCLMDTFLNIGIKKGNVSKQFREMLADGRITQG  120

Query  121  EALDMARVIHEMHKALSELNQQVQSCV  147
            EA+DMA+VIHEMH  L+ L QQ+ +C+
Sbjct  121  EAIDMAKVIHEMHVLLATLEQQINACI  147


>A0A653K9Y8 Putative bacteriophage protein (Gp55-like) [Acinetobacter 
proteolyticus]
Length=150

 Score = 228 bits (582),  Expect = 3e-82
 Identities = 110/147 (75%), Positives = 129/147 (88%), Gaps = 0/147 (0%)

Query  1    MNILDAAYHTVHDFLGGASALASRLGIKSPAVLNSKVNPNTHTHHITLLEAVKLMEITGD  60
            MNILDAAYHTVHDF GGA+ALASR+GIKSPAVLNSKVNPNT THH+TLLEA KLM ITGD
Sbjct  1    MNILDAAYHTVHDFKGGANALASRMGIKSPAVLNSKVNPNTETHHLTLLEASKLMGITGD  60

Query  61   YRILQEMCARLGKVAIDLPDIPESQRDTSLMDTFLCIGIKKGDISALFKEMMADGRITQG  120
            +RILQ +CA  GK AIDLPDIPES+RD+ LMDTFL IGIKKG++S  F+EM+ADGRIT+G
Sbjct  61   FRILQAICAEHGKAAIDLPDIPESKRDSCLMDTFLNIGIKKGNVSKQFREMLADGRITKG  120

Query  121  EALDMARVIHEMHKALSELNQQVQSCV  147
            E +DMA+VIH+MH  L+ L QQ+ +C+
Sbjct  121  EVIDMAKVIHDMHVLLATLEQQINACI  147


>N9RQY2 Phage regulatory protein CII (CP76) [Acinetobacter sp. 
NIPH 2100]
Length=150

 Score = 226 bits (575),  Expect = 3e-81
 Identities = 110/147 (75%), Positives = 128/147 (87%), Gaps = 0/147 (0%)

Query  1    MNILDAAYHTVHDFLGGASALASRLGIKSPAVLNSKVNPNTHTHHITLLEAVKLMEITGD  60
            MNILDAAYHTVHDF GGA+ALASR+GIKSPAVLNSKVNPNT THH+TLLEA KLM ITGD
Sbjct  1    MNILDAAYHTVHDFKGGANALASRMGIKSPAVLNSKVNPNTETHHLTLLEASKLMGITGD  60

Query  61   YRILQEMCARLGKVAIDLPDIPESQRDTSLMDTFLCIGIKKGDISALFKEMMADGRITQG  120
             RILQ +CA  GK AIDLPDIPES+RD+ LMDTFL I IKKG++S  F+EM+ADGRIT+G
Sbjct  61   SRILQAICAEHGKAAIDLPDIPESKRDSCLMDTFLNISIKKGNVSKQFREMLADGRITKG  120

Query  121  EALDMARVIHEMHKALSELNQQVQSCV  147
            EA+DMA+VIH+MH  L+ L QQ+ +C+
Sbjct  121  EAIDMAKVIHDMHVLLATLEQQIHACI  147


>A0A1Z9YXX0 Transcriptional regulator [Acinetobacter populi]
Length=156

 Score = 221 bits (564),  Expect = 2e-79
 Identities = 109/147 (74%), Positives = 124/147 (84%), Gaps = 0/147 (0%)

Query  1    MNILDAAYHTVHDFLGGASALASRLGIKSPAVLNSKVNPNTHTHHITLLEAVKLMEITGD  60
            MNILDA YHTVHDF GGA+ALA RLGI+SPAVLNSKVNPNT THHITLLEAVKLM ITGD
Sbjct  1    MNILDAVYHTVHDFKGGATALAIRLGIRSPAVLNSKVNPNTETHHITLLEAVKLMVITGD  60

Query  61   YRILQEMCARLGKVAIDLPDIPESQRDTSLMDTFLCIGIKKGDISALFKEMMADGRITQG  120
            YRILQ +CA LGKVAIDLPDIPESQRDT+LM+  L + IKKGD S +FK+MMADGRIT G
Sbjct  61   YRILQSLCAELGKVAIDLPDIPESQRDTTLMELMLNVDIKKGDCSGVFKQMMADGRITAG  120

Query  121  EALDMARVIHEMHKALSELNQQVQSCV  147
            EA DM+ ++H+M + L  L +Q+  CV
Sbjct  121  EARDMSTIVHQMIEQLVTLEKQINRCV  147



Lambda      K        H        a         alpha
   0.325    0.137    0.399    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 129960


  Database: c58332e70d4725dc50aba6f3184bfcfd.TrEMBL.fasta
    Posted date:  May 8, 2024  4:43 PM
  Number of letters in database: 1,353
  Number of sequences in database:  9



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40