BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: af75c683d58d77ff30b85c36189f215c.SwissProt.fasta
4 sequences; 3,672 total letters
Query= ACIAD2191
Length=339
Score E
Sequences producing significant alignments: (Bits) Value
P0DJJ0 SLIT-ROBO Rho GTPase-activating protein 2C [Homo sapiens] 36.2 7e-06
D4A208 SLIT-ROBO Rho GTPase-activating protein 2 [Rattus norvegicus] 35.8 1e-05
Q91Z67 SLIT-ROBO Rho GTPase-activating protein 2 [Mus musculus] 35.8 1e-05
O75044 SLIT-ROBO Rho GTPase-activating protein 2 [Homo sapiens] 35.8 1e-05
>P0DJJ0 SLIT-ROBO Rho GTPase-activating protein 2C [Homo sapiens]
Length=459
Score = 36.2 bits (82), Expect = 7e-06
Identities = 30/111 (27%), Positives = 51/111 (46%), Gaps = 16/111 (14%)
Query 233 KETRSQ---QLKVFYRGRGETTEEFQYLLDYFRHNQFLEYKEDTIEIFFSKNVDKNAANL 289
KE R+Q Q+K + + Q L D+FR K+ IE+ +S+N++K A +
Sbjct 22 KEIRAQLTEQMKCLDQQCELRVQLLQDLQDFFR-------KKAEIEMDYSRNLEKLAEHF 74
Query 290 FDKSRHEYIERYTKNQETLT------FCINSISLNGLDHIDKSQTFNENII 334
K+R +++ K+Q L+ +N + DH S + NII
Sbjct 75 LAKTRSTKDQQFKKDQNVLSPVNCWNLLLNQVKWESRDHTTLSDIYLNNII 125
Score = 17.7 bits (34), Expect = 4.8
Identities = 10/36 (28%), Positives = 18/36 (50%), Gaps = 0/36 (0%)
Query 25 LSNDIFPYFRWNSIGAKNLNWDCVKLTEHKKEKTKT 60
L D+ +FR + + + + KL EH KT++
Sbjct 45 LLQDLQDFFRKKAEIEMDYSRNLEKLAEHFLAKTRS 80
>D4A208 SLIT-ROBO Rho GTPase-activating protein 2 [Rattus norvegicus]
Length=1071
Score = 35.8 bits (81), Expect = 1e-05
Identities = 30/111 (27%), Positives = 50/111 (45%), Gaps = 16/111 (14%)
Query 233 KETRSQ---QLKVFYRGRGETTEEFQYLLDYFRHNQFLEYKEDTIEIFFSKNVDKNAANL 289
KE R+Q Q+K + + Q L D+FR K+ IE+ +S+N++K A
Sbjct 22 KEIRAQLTEQMKCLDQQCELRVQLLQDLQDFFR-------KKAEIEMDYSRNLEKLAERF 74
Query 290 FDKSRHEYIERYTKNQETLT------FCINSISLNGLDHIDKSQTFNENII 334
K+R +++ K+Q L+ +N + DH S + NII
Sbjct 75 LAKTRSTKDQQFKKDQNVLSPVNCWNLLLNQVKRESRDHTTLSDIYLNNII 125
Score = 21.2 bits (43), Expect = 0.42
Identities = 28/125 (22%), Positives = 52/125 (42%), Gaps = 18/125 (14%)
Query 207 FQGVDGFEESATIELLKSNVIILKSSKETRSQQLKVFYRGRGETTEEFQY--LLDYFRHN 264
F D F+ S ++E +KS V SK + +++ R + TE+F + + +Y
Sbjct 407 FDVSDCFQYSNSMESVKSTVSETFMSKPSIAKR-----RANQQETEQFYFTKMKEYLEGR 461
Query 265 QF---LEYKEDTIEIFFSKNVDKNAANLFDKSRHEYIERYTKNQETLTF----CINSISL 317
L+ K D ++ K + ++ +R R + + + CI IS
Sbjct 462 NLITKLQAKHDLLQ----KTLGESQRTDCSLARRSSTVRKQDSSQAIPLVVESCIRFISR 517
Query 318 NGLDH 322
+GL H
Sbjct 518 HGLRH 522
Score = 16.9 bits (32), Expect = 8.7
Identities = 7/23 (30%), Positives = 12/23 (52%), Gaps = 0/23 (0%)
Query 11 IMSETEAIAKMSEILSNDIFPYF 33
+ E+ +S+I N+I P F
Sbjct 106 VKRESRDHTTLSDIYLNNIIPRF 128
>Q91Z67 SLIT-ROBO Rho GTPase-activating protein 2 [Mus musculus]
Length=1071
Score = 35.8 bits (81), Expect = 1e-05
Identities = 30/111 (27%), Positives = 50/111 (45%), Gaps = 16/111 (14%)
Query 233 KETRSQ---QLKVFYRGRGETTEEFQYLLDYFRHNQFLEYKEDTIEIFFSKNVDKNAANL 289
KE R+Q Q+K + + Q L D+FR K+ IE+ +S+N++K A
Sbjct 22 KEIRAQLTEQMKCLDQQCELRVQLLQDLQDFFR-------KKAEIEMDYSRNLEKLAERF 74
Query 290 FDKSRHEYIERYTKNQETLT------FCINSISLNGLDHIDKSQTFNENII 334
K+R +++ K+Q L+ +N + DH S + NII
Sbjct 75 LAKTRSTKDQQFKKDQNVLSPVNCWNLLLNQVKRESRDHTTLSDIYLNNII 125
Score = 21.9 bits (45), Expect = 0.24
Identities = 28/125 (22%), Positives = 52/125 (42%), Gaps = 18/125 (14%)
Query 207 FQGVDGFEESATIELLKSNVIILKSSKETRSQQLKVFYRGRGETTEEFQY--LLDYFRHN 264
F D F+ S ++E +KS V SK + +++ R + TE+F + + +Y
Sbjct 407 FDVSDCFQYSNSMESVKSTVSETFMSKPSIAKR-----RANQQETEQFYFTKMKEYLEGR 461
Query 265 QF---LEYKEDTIEIFFSKNVDKNAANLFDKSRHEYIERYTKNQETLTF----CINSISL 317
L+ K D ++ K + ++ +R R + + + CI IS
Sbjct 462 NLITKLQAKHDLLQ----KTLGESQRTDCSLARRSSTVRKQDSSQAIPLVVESCIRFISR 517
Query 318 NGLDH 322
+GL H
Sbjct 518 HGLQH 522
Score = 16.9 bits (32), Expect = 8.7
Identities = 7/23 (30%), Positives = 12/23 (52%), Gaps = 0/23 (0%)
Query 11 IMSETEAIAKMSEILSNDIFPYF 33
+ E+ +S+I N+I P F
Sbjct 106 VKRESRDHTTLSDIYLNNIIPRF 128
>O75044 SLIT-ROBO Rho GTPase-activating protein 2 [Homo sapiens]
Length=1071
Score = 35.8 bits (81), Expect = 1e-05
Identities = 30/111 (27%), Positives = 50/111 (45%), Gaps = 16/111 (14%)
Query 233 KETRSQ---QLKVFYRGRGETTEEFQYLLDYFRHNQFLEYKEDTIEIFFSKNVDKNAANL 289
KE R+Q Q+K + + Q L D+FR K+ IE+ +S+N++K A
Sbjct 22 KEIRAQLTEQMKCLDQQCELRVQLLQDLQDFFR-------KKAEIEMDYSRNLEKLAERF 74
Query 290 FDKSRHEYIERYTKNQETLT------FCINSISLNGLDHIDKSQTFNENII 334
K+R +++ K+Q L+ +N + DH S + NII
Sbjct 75 LAKTRSTKDQQFKKDQNVLSPVNCWNLLLNQVKRESRDHTTLSDIYLNNII 125
Score = 21.9 bits (45), Expect = 0.24
Identities = 28/125 (22%), Positives = 52/125 (42%), Gaps = 18/125 (14%)
Query 207 FQGVDGFEESATIELLKSNVIILKSSKETRSQQLKVFYRGRGETTEEFQY--LLDYFRHN 264
F D F+ S ++E +KS V SK + +++ R + TE+F + + +Y
Sbjct 407 FDVSDCFQYSNSMESVKSTVSETFMSKPSIAKR-----RANQQETEQFYFTKMKEYLEGR 461
Query 265 QF---LEYKEDTIEIFFSKNVDKNAANLFDKSRHEYIERYTKNQETLTF----CINSISL 317
L+ K D ++ K + ++ +R R + + + CI IS
Sbjct 462 NLITKLQAKHDLLQ----KTLGESQRTDCSLARRSSTVRKQDSSQAIPLVVESCIRFISR 517
Query 318 NGLDH 322
+GL H
Sbjct 518 HGLQH 522
Score = 16.9 bits (32), Expect = 8.7
Identities = 7/23 (30%), Positives = 12/23 (52%), Gaps = 0/23 (0%)
Query 11 IMSETEAIAKMSEILSNDIFPYF 33
+ E+ +S+I N+I P F
Sbjct 106 VKRESRDHTTLSDIYLNNIIPRF 128
Lambda K H a alpha
0.319 0.136 0.399 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 1026648
Database: af75c683d58d77ff30b85c36189f215c.SwissProt.fasta
Posted date: May 20, 2024 4:14 AM
Number of letters in database: 3,672
Number of sequences in database: 4
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
