ACIAD2194 / SwissProt Alignments

BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: 947d68f592bc8fef9e28f050cb426eca.SwissProt.fasta
           1 sequences; 948 total letters



Query= ACIAD2194

Length=152
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

F4J9A8 Receptor-like protein 45 [Arabidopsis thaliana]                33.5    3e-06


>F4J9A8 Receptor-like protein 45 [Arabidopsis thaliana]
Length=948

 Score = 33.5 bits (75),  Expect = 3e-06
 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 0/48 (0%)

Query  102  FTAVNIINLYDIEISDLKGNKYRDFTNYEDHLNINNLIATYVENNKLT  149
            F    +INL  +E+ DLK NK+      ++  N+ NL A  + NNK +
Sbjct  176  FPVQELINLTSLEVLDLKFNKFSGQLPTQELTNLRNLRALDLSNNKFS  223


 Score = 16.9 bits (32),  Expect = 0.86
 Identities = 9/47 (19%), Positives = 21/47 (45%), Gaps = 0/47 (0%)

Query  1    MGALQNCEISMNTKSNRFNYSAVTLLTACTIVAGMTLACHPAASPVV  47
            M  ++N E    + +N        L T C  ++ + L+ +  + P++
Sbjct  450  MARMENIEFMDLSYNNFSGKLPRNLFTGCYSLSWLKLSHNRFSGPII  496


 Score = 16.5 bits (31),  Expect = 1.1
 Identities = 5/12 (42%), Positives = 8/12 (67%), Gaps = 0/12 (0%)

Query  111  YDIEISDLKGNK  122
            Y + + DL+ NK
Sbjct  619  YGLRLLDLRNNK  630


 Score = 15.4 bits (28),  Expect = 2.7
 Identities = 7/17 (41%), Positives = 9/17 (53%), Gaps = 0/17 (0%)

Query  133  LNINNLIATYVENNKLT  149
            LN+  L    + NN LT
Sbjct  524  LNLRMLSVIDLSNNLLT  540


 Score = 13.9 bits (24),  Expect = 8.4
 Identities = 13/56 (23%), Positives = 18/56 (32%), Gaps = 12/56 (21%)

Query  68   KDTGIATIRLDDFILKANFQFETHPDSYGVVGSDFTAVNIINLYDIEISDLKGNKY  123
            KD G+    L    L  N      P S            +  + +IE  DL  N +
Sbjct  423  KDVGLILASLRHLNLSNNEFLGNMPSS------------MARMENIEFMDLSYNNF  466



Lambda      K        H        a         alpha
   0.321    0.135    0.397    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 111996


  Database: 947d68f592bc8fef9e28f050cb426eca.SwissProt.fasta
    Posted date:  May 9, 2024  7:19 PM
  Number of letters in database: 948
  Number of sequences in database:  1



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40