BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 28b0b2d17bb6ee333c95c3f39bcfef18.TrEMBL.fasta
4 sequences; 1,514 total letters
Query= ACIAD2195
Length=112
Score E
Sequences producing significant alignments: (Bits) Value
Q6FAB9 Uncharacterized protein [Acinetobacter baylyi (strain ATCC... 219 5e-80
A0A7G2SEK1 Uncharacterized protein [Acinetobacter sp] 190 1e-68
A0A1Z9YXU7 Uncharacterized protein [Acinetobacter populi] 108 3e-36
A0A814MK49 EGF-like domain-containing protein [Didymodactylos car... 37.4 9e-08
>Q6FAB9 Uncharacterized protein [Acinetobacter baylyi (strain
ATCC 33305 / BD413 / ADP1)]
Length=111
Score = 219 bits (559), Expect = 5e-80
Identities = 110/111 (99%), Positives = 111/111 (100%), Gaps = 0/111 (0%)
Query 1 LRHTSKITNLQRYKNMNAKLPVLTITTEQLRKFERERDSIVFDVQSTSDILDQMSTLFSL 60
+RHTSKITNLQRYKNMNAKLPVLTITTEQLRKFERERDSIVFDVQSTSDILDQMSTLFSL
Sbjct 1 MRHTSKITNLQRYKNMNAKLPVLTITTEQLRKFERERDSIVFDVQSTSDILDQMSTLFSL 60
Query 61 IAKASEGENPSIYQIKNLARLGHYTCDGWSGVIESIESHIKEISPLNSTNI 111
IAKASEGENPSIYQIKNLARLGHYTCDGWSGVIESIESHIKEISPLNSTNI
Sbjct 61 IAKASEGENPSIYQIKNLARLGHYTCDGWSGVIESIESHIKEISPLNSTNI 111
>A0A7G2SEK1 Uncharacterized protein [Acinetobacter sp]
Length=96
Score = 190 bits (483), Expect = 1e-68
Identities = 96/96 (100%), Positives = 96/96 (100%), Gaps = 0/96 (0%)
Query 16 MNAKLPVLTITTEQLRKFERERDSIVFDVQSTSDILDQMSTLFSLIAKASEGENPSIYQI 75
MNAKLPVLTITTEQLRKFERERDSIVFDVQSTSDILDQMSTLFSLIAKASEGENPSIYQI
Sbjct 1 MNAKLPVLTITTEQLRKFERERDSIVFDVQSTSDILDQMSTLFSLIAKASEGENPSIYQI 60
Query 76 KNLARLGHYTCDGWSGVIESIESHIKEISPLNSTNI 111
KNLARLGHYTCDGWSGVIESIESHIKEISPLNSTNI
Sbjct 61 KNLARLGHYTCDGWSGVIESIESHIKEISPLNSTNI 96
>A0A1Z9YXU7 Uncharacterized protein [Acinetobacter populi]
Length=97
Score = 108 bits (271), Expect = 3e-36
Identities = 54/94 (57%), Positives = 73/94 (78%), Gaps = 1/94 (1%)
Query 16 MNAKLPVLTITTEQLRKFERERDSIVFDVQSTSDILDQMSTLFSLIAKASEGEN-PSIYQ 74
MNA+ LTIT EQL++FER+ + + FDV T+DIL+QM TLF LIAK +E EN SI Q
Sbjct 1 MNAQAQFLTITPEQLKEFERKIEFLSFDVGCTNDILNQMGTLFCLIAKLAEDENGASIIQ 60
Query 75 IKNLARLGHYTCDGWSGVIESIESHIKEISPLNS 108
I++LARLGH+TCD WS ++SIE ++K++SPL +
Sbjct 61 IRDLARLGHFTCDSWSSCVDSIEENVKKLSPLET 94
>A0A814MK49 EGF-like domain-containing protein [Didymodactylos
carnosus]
Length=1210
Score = 37.4 bits (85), Expect = 9e-08
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 2/78 (3%)
Query 35 RERDSIVFDVQSTSDILDQMSTLFSLIAKASEGENPSIY--QIKNLARLGHYTCDGWSGV 92
R +D IV+ V SD++DQ+ +FS ++ SE +P+++ I N H DG++
Sbjct 360 RTKDFIVYYVDGWSDLIDQLQLIFSACSQPSEKCSPNMFLCDISNKCVSKHRIQDGFTDC 419
Query 93 IESIESHIKEISPLNSTN 110
I+ +NS+N
Sbjct 420 YFQIDERYSGECLVNSSN 437
Score = 16.9 bits (32), Expect = 0.92
Identities = 7/11 (64%), Positives = 8/11 (73%), Gaps = 0/11 (0%)
Query 38 DSIVFDVQSTS 48
D I+FD STS
Sbjct 1155 DCIIFDHLSTS 1165
Lambda K H a alpha
0.320 0.134 0.377 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 114308
Database: 28b0b2d17bb6ee333c95c3f39bcfef18.TrEMBL.fasta
Posted date: May 9, 2024 4:28 AM
Number of letters in database: 1,514
Number of sequences in database: 4
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
