BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: 4c70762e30580070f6f5e4243dad2a37.SwissProt.fasta
           7 sequences; 463 total letters



Query= ACIAD2204

Length=79
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

P0AAT1 Uncharacterized protein YbdD [Shigella flexneri]               62.4    3e-19
P0AAT0 Uncharacterized protein YbdD [Escherichia coli O6:H1 (stra...  62.4    3e-19
P0AAS9 Uncharacterized protein YbdD [Escherichia coli (strain K12)]   62.4    3e-19
P0ADD1 Uncharacterized protein YjiX [Shigella flexneri]               53.9    6e-16
P0ADC8 Uncharacterized protein YjiX [Escherichia coli (strain K12)]   53.9    6e-16
P0ADC9 Uncharacterized protein YjiX [Escherichia coli O6:H1 (stra...  53.9    6e-16
P0ADD0 Uncharacterized protein YjiX [Escherichia coli O157:H7]        53.9    6e-16


>P0AAT1 Uncharacterized protein YbdD [Shigella flexneri]
Length=65

 Score = 62.4 bits (150),  Expect = 3e-19
 Identities = 26/61 (43%), Positives = 40/61 (66%), Gaps = 0/61 (0%)

Query  16  IATLFKRLQQSFRLMVGVPDYETYLEHMKTHHPELTPMDTKTFYRHCVDSRYPSSGNMKK  75
           +A   K L Q+ +LM+G+PDY+ Y+EHM+ +HP+ TPM  + F+R   D+RY   G  + 
Sbjct  5   LAKAGKYLGQAAKLMIGMPDYDNYVEHMRVNHPDQTPMTYEEFFRERQDARYGGKGGARC  64

Query  76  C  76
           C
Sbjct  65  C  65


>P0AAT0 Uncharacterized protein YbdD [Escherichia coli O6:H1 (strain 
CFT073 / ATCC 700928 / UPEC)]
Length=65

 Score = 62.4 bits (150),  Expect = 3e-19
 Identities = 26/61 (43%), Positives = 40/61 (66%), Gaps = 0/61 (0%)

Query  16  IATLFKRLQQSFRLMVGVPDYETYLEHMKTHHPELTPMDTKTFYRHCVDSRYPSSGNMKK  75
           +A   K L Q+ +LM+G+PDY+ Y+EHM+ +HP+ TPM  + F+R   D+RY   G  + 
Sbjct  5   LAKAGKYLGQAAKLMIGMPDYDNYVEHMRVNHPDQTPMTYEEFFRERQDARYGGKGGARC  64

Query  76  C  76
           C
Sbjct  65  C  65


>P0AAS9 Uncharacterized protein YbdD [Escherichia coli (strain 
K12)]
Length=65

 Score = 62.4 bits (150),  Expect = 3e-19
 Identities = 26/61 (43%), Positives = 40/61 (66%), Gaps = 0/61 (0%)

Query  16  IATLFKRLQQSFRLMVGVPDYETYLEHMKTHHPELTPMDTKTFYRHCVDSRYPSSGNMKK  75
           +A   K L Q+ +LM+G+PDY+ Y+EHM+ +HP+ TPM  + F+R   D+RY   G  + 
Sbjct  5   LAKAGKYLGQAAKLMIGMPDYDNYVEHMRVNHPDQTPMTYEEFFRERQDARYGGKGGARC  64

Query  76  C  76
           C
Sbjct  65  C  65


>P0ADD1 Uncharacterized protein YjiX [Shigella flexneri]
Length=67

 Score = 53.9 bits (128),  Expect = 6e-16
 Identities = 23/58 (40%), Positives = 38/58 (66%), Gaps = 2/58 (3%)

Query  21  KRLQQSFRLMVGVPDYETYLEHMKTHHPELTPMDTKTFYRHCVDSRY--PSSGNMKKC  76
           K L Q+ ++++G+PDY+ Y+EHMKT+HP+   M  + F+R   ++RY     G M+ C
Sbjct  10  KYLGQAAKMLIGIPDYDNYVEHMKTNHPDKPYMSYEEFFRERQNARYGGDGKGGMRCC  67


>P0ADC8 Uncharacterized protein YjiX [Escherichia coli (strain 
K12)]
Length=67

 Score = 53.9 bits (128),  Expect = 6e-16
 Identities = 23/58 (40%), Positives = 38/58 (66%), Gaps = 2/58 (3%)

Query  21  KRLQQSFRLMVGVPDYETYLEHMKTHHPELTPMDTKTFYRHCVDSRY--PSSGNMKKC  76
           K L Q+ ++++G+PDY+ Y+EHMKT+HP+   M  + F+R   ++RY     G M+ C
Sbjct  10  KYLGQAAKMLIGIPDYDNYVEHMKTNHPDKPYMSYEEFFRERQNARYGGDGKGGMRCC  67


>P0ADC9 Uncharacterized protein YjiX [Escherichia coli O6:H1 (strain 
CFT073 / ATCC 700928 / UPEC)]
Length=67

 Score = 53.9 bits (128),  Expect = 6e-16
 Identities = 23/58 (40%), Positives = 38/58 (66%), Gaps = 2/58 (3%)

Query  21  KRLQQSFRLMVGVPDYETYLEHMKTHHPELTPMDTKTFYRHCVDSRY--PSSGNMKKC  76
           K L Q+ ++++G+PDY+ Y+EHMKT+HP+   M  + F+R   ++RY     G M+ C
Sbjct  10  KYLGQAAKMLIGIPDYDNYVEHMKTNHPDKPYMSYEEFFRERQNARYGGDGKGGMRCC  67


>P0ADD0 Uncharacterized protein YjiX [Escherichia coli O157:H7]
Length=67

 Score = 53.9 bits (128),  Expect = 6e-16
 Identities = 23/58 (40%), Positives = 38/58 (66%), Gaps = 2/58 (3%)

Query  21  KRLQQSFRLMVGVPDYETYLEHMKTHHPELTPMDTKTFYRHCVDSRY--PSSGNMKKC  76
           K L Q+ ++++G+PDY+ Y+EHMKT+HP+   M  + F+R   ++RY     G M+ C
Sbjct  10  KYLGQAAKMLIGIPDYDNYVEHMKTNHPDKPYMSYEEFFRERQNARYGGDGKGGMRCC  67



Lambda      K        H        a         alpha
   0.329    0.138    0.458    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 21328


  Database: 4c70762e30580070f6f5e4243dad2a37.SwissProt.fasta
    Posted date:  May 19, 2024  9:27 PM
  Number of letters in database: 463
  Number of sequences in database:  7



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40