BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 046cc65eb3835e6509139db7617651e3.SwissProt.fasta
17 sequences; 12,391 total letters
Query= ACIAD2216
Length=876
Score E
Sequences producing significant alignments: (Bits) Value
P75867 Putative Lon protease homolog [Escherichia coli (strain K12)] 285 1e-88
P43865 Putative Lon protease homolog [Haemophilus influenzae (str... 236 2e-70
Q9HJ89 Archaeal Lon protease [Thermoplasma acidophilum (strain AT... 130 2e-34
Q8NKS6 Archaeal Lon protease [Thermococcus kodakarensis (strain A... 129 5e-34
Q9UYC6 Archaeal Lon protease [Pyrococcus abyssi (strain GE5 / Ors... 130 1e-33
O29883 Archaeal Lon protease [Archaeoglobus fulgidus (strain ATCC... 125 1e-32
P58274 Archaeal Lon protease [Thermoplasma volcanium (strain ATCC... 125 1e-32
O58221 Archaeal Lon protease [Pyrococcus horikoshii (strain ATCC ... 122 4e-31
O26878 Archaeal Lon protease [Methanothermobacter thermautotrophi... 117 4e-30
Q9HSC3 Archaeal Lon protease [Halobacterium salinarum (strain ATC... 101 7e-25
Q58812 Archaeal Lon protease [Methanocaldococcus jannaschii (stra... 77.8 1e-17
P42425 Lon protease 2 [Bacillus subtilis (strain 168)] 60.5 3e-12
P36772 Lon protease [Brevibacillus choshinensis] 56.6 5e-11
P74956 Lon protease [Vibrio parahaemolyticus serotype O3:K6 (stra... 49.3 9e-09
P46067 Lon protease [Erwinia amylovora] 48.1 2e-08
O69177 Lon protease [Rhizobium meliloti (strain 1021)] 48.1 2e-08
Q2YPX3 Lon protease [Brucella abortus (strain 2308)] 47.8 3e-08
>P75867 Putative Lon protease homolog [Escherichia coli (strain
K12)]
Length=586
Score = 285 bits (728), Expect = 1e-88
Identities = 173/440 (39%), Positives = 257/440 (58%), Gaps = 18/440 (4%)
Query 351 VIFEDFPTHYNLLGHVEQLTQNGTITTDFTLIRPGSLHQANGGFLMLEAEQLLEQPYAWQ 410
V+ D+ L G + Q NG IT ++PG +HQANGG L++ LL QP W
Sbjct 117 VVAADWVEAEQLFGCLRQF--NGDIT-----LQPGLVHQANGGILIISLRTLLAQPLLWM 169
Query 411 GLKRALKSGQLKLSSLEHMLTLTGSISIEPAAVPLDLKVILMAEPEIYYEILEVEPELGS 470
LK + + + + L S+ ++PL LKVIL+ E E + E+EPEL S
Sbjct 170 RLKNIVNRERFDWVAFDESRPLPVSVP----SMPLKLKVILVGERESLADFQEMEPEL-S 224
Query 471 VFKIRADFTDTLQRNETNEQAYMQLIADYVQADKLLPFDRS-ALAALLTDSSRQAEDQSS 529
I ++F DTLQ + + LP + A L+ +++R +Q +
Sbjct 225 EQAIYSEFEDTLQIVDAESVTQWCRWVTFTARHNHLPAPGADAWPILIREAARYTGEQET 284
Query 530 LSLHASTLGDLIREAHHHAFKSGDKIVSDHHINLALQHRQYRLGYLRELYWQDLSRGTQL 589
L L + +R+ A S +NL LQ R++R G+L E ++ + L
Sbjct 285 LPLSPQWI---LRQCKEVASLCDGDTFSGEQLNLMLQQREWREGFLAERMQDEILQEQIL 341
Query 590 IETRGHRLGQINALSVIHYADVE--FGLPSRLTASVYQGGGDILDIERSVELGGSLHAKG 647
IET G R+GQINALSVI + FG PSR++ V+ G G+ DIER ELGG++HAKG
Sbjct 342 IETEGERIGQINALSVIEFPGHPRAFGEPSRISCVVHIGDGEFTDIERKAELGGNIHAKG 401
Query 648 VLLMSSFLKAHFGRSQILHFSAALAFEQSYGQVDGDSATVAELSALISAISQLPIDQSWA 707
+++M +FL + Q + FSA+L FEQSY +VDGDSA++AEL ALISA++ +P++QS A
Sbjct 402 MMIMQAFLMSELQLEQQIPFSASLTFEQSYSEVDGDSASMAELCALISALADVPVNQSIA 461
Query 708 ITGSMNQLGQVQPIGGVNAKIEGFYDACKLQGLTGKQGVIIPRQNMQHLMLRQDVMEAVK 767
ITGS++Q G+ QP+GG+N KIEGF+ C+ + LTGKQGVIIP N++HL L ++++AV+
Sbjct 462 ITGSVDQFGRAQPVGGLNEKIEGFFAICQQRELTGKQGVIIPTANVRHLSLHSELVKAVE 521
Query 768 AGQFHVHAIETIDQALEILM 787
G+F + A++ + AL +L+
Sbjct 522 EGKFTIWAVDDVTDALPLLL 541
>P43865 Putative Lon protease homolog [Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd)]
Length=601
Score = 236 bits (601), Expect = 2e-70
Identities = 172/528 (33%), Positives = 271/528 (51%), Gaps = 31/528 (6%)
Query 295 QGLDEYLKHYADDIIQ-NVEMILEQEE--DDFSPALFNRVPSRYQANTIVTNKPNSGAPV 351
QG+D +L+H ++ V +E E +F ++V S + N ++ + P
Sbjct 55 QGIDLFLRHPTRSLLMMKVGEPVEYAELLQNFISQNHHKVRSIFGVNYVIEQGDSFSFPH 114
Query 352 IF--------EDFPTHYNLLG--HVEQLTQNGTI-----TTDFTLIRPGSLHQANGGFLM 396
++ ++F + L + +Q G+ + D L+ PG +H+ANGG L+
Sbjct 115 VYTEPAKSLDDNFASQGEALSALYCDQFQLFGSFRIHPRSQDIQLV-PGLVHKANGGVLI 173
Query 397 LEAEQLLEQPYAWQGLKRALKSGQLKLSSLEHMLTLTGSISIEPAAVPLDLKVILMAEPE 456
L A LL Q W LK+ L++ S L I + L+LKVI++
Sbjct 174 LSAATLLSQFDLWGRLKQILQTQTFDWYSAHPFKNLPCDIP----SYALNLKVIVLGNRT 229
Query 457 IYYEILEVEPELGSVFKIRADFTDTLQRNETNEQAYMQLIADYVQADKLLPFDRSALAAL 516
+ E+E L S F A+ + E EQ + ++ + D AL L
Sbjct 230 ELATLAELEENLYS-FADYAEIESYISVAEVEEQKTWAGYVQQMAQEQNIELDFLALNKL 288
Query 517 LTDSSRQAEDQSSLSLHASTLGDLIREAHHHAFKSGDKIVSDHHINLALQHRQYRLGYLR 576
R++E++ ++ L +++++A K+ V I Q + + G+L+
Sbjct 289 YQLLVRESENRFLINASPLKLKEILQDASTFTEKTALSAVDFEGI---FQQKLAQYGFLK 345
Query 577 ELYWQDLSRGTQLIETRGHRLGQINALSVIHY--ADVEFGLPSRLTASVYQGGGDILDIE 634
E + D+ +ET+G +GQIN LSVI Y V FG PSR++ V G G+++D+E
Sbjct 346 EQTYADILNEQVYVETQGEIVGQINGLSVIEYPGTPVCFGEPSRISCIVQFGDGEVIDVE 405
Query 635 RSVELGGSLHAKGVLLMSSFLKAHFGRSQILHFSAALAFEQSYGQVDGDSATVAELSALI 694
R EL G++H KG+++ + L L FSA+L FEQSYG++DGDSA++A L+
Sbjct 406 RKNELAGNIHGKGMMIAQACLSNILDLPSQLPFSASLVFEQSYGEIDGDSASLAIFCVLV 465
Query 695 SAISQLPIDQSWAITGSMNQLGQVQPIGGVNAKIEGFYDACKLQGLTGKQGVIIPRQNMQ 754
SA++ LP+ Q AITGS++Q G V +GGVN KIEGF+ C+ +GLTGKQGVIIP +Q
Sbjct 466 SALADLPLPQHIAITGSIDQFGLVHSVGGVNDKIEGFFTICQRRGLTGKQGVIIPMTTIQ 525
Query 755 HLMLRQDVMEAVKAGQFHVHAIETIDQALEILMARPVGTLDKKGRYSK 802
L L DV AVK G+F ++ +E I QA E+L R + LD+ Y++
Sbjct 526 QLSLSDDVKSAVKNGEFFIYPVEDIYQACELLFGRDL--LDENKDYTE 571
>Q9HJ89 Archaeal Lon protease [Thermoplasma acidophilum (strain
ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165)]
Length=657
Score = 130 bits (328), Expect = 2e-34
Identities = 121/460 (26%), Positives = 210/460 (46%), Gaps = 57/460 (12%)
Query 340 IVTNKPNSGAPVIFEDFPTHYNLLGHV--EQLTQNGTITTDFTLIRPGSLHQANGGFLML 397
+V++ PN P + LLG V + G T + G++H+A+ G L +
Sbjct 181 LVSHNPNDKPPFVDSTGAHSGALLGDVRHDPFQSGGLETPAHERVEAGNIHKAHKGVLFI 240
Query 398 EAEQLLEQPYAWQGLKRALKSGQLKLSSLEHMLTLTGSISIEPAAVPLDLKVILMAEPEI 457
+ LL +P Q + AL+ + +S + ++ VP D ++
Sbjct 241 DEINLL-RPEDQQAILTALQEKKYPISGQSER---SAGAMVQTEPVPCDFVLVAAGN--- 293
Query 458 YYEILEVEPELGSVFK---IRADFTDTLQRNETNEQAYMQLIADYVQADKLLP-FDRSAL 513
Y I + P L S + D + N+ N + +Q IA V+ DK +P FD+SA+
Sbjct 294 YDAIRNMHPALRSRIRGYGYEVVVNDYMDDNDENRRKLVQFIAQEVEKDKKIPHFDKSAI 353
Query 514 AALLTDSSRQAEDQSSLSLHASTLGDLIREAHHHAFKSGDKIVSDHHI----NLALQHRQ 569
++ ++ +++ ++ L+L LG L+R A A +V+ + NLA Q
Sbjct 354 IEVIKEAQKRSGRRNKLTLRLRELGGLVRVAGDIAVSQKKTVVTAADVIAAKNLAKPLEQ 413
Query 570 Y---RLGYLRELYWQDLSRGTQLIETRGHRLGQINALSVI-------HYADVEFGLPSRL 619
R ++++Y + T G +G +N L+V+ Y V + + +
Sbjct 414 QIADRSIEIKKIY--------KTFRTEGSVVGMVNGLAVVGADTGMSEYTGVVLPIVAEV 465
Query 620 TASVYQGGGDILDIERSVELGGSLHAKGVLLMSSFLKAHFGRSQILHFSAALAFEQSYGQ 679
T + ++G G+I+ + G + + VL +S+ K G+ I + + F +Y
Sbjct 466 TPAEHKGAGNIIATGKL----GDIAKEAVLNVSAVFKKLTGKD-ISNMDIHIQFVGTYEG 520
Query 680 VDGDSATVAELSALISAISQLPIDQSWAITGSMNQLGQVQPIGGVNAKIEGFYDACKLQG 739
V+GDSA+V+ +A+ISAI +P+DQS A+TGS++ G V P+GGV AK+E +A
Sbjct 521 VEGDSASVSIATAVISAIENIPVDQSVAMTGSLSVRGDVLPVGGVTAKVEAAIEA----- 575
Query 740 LTGKQGVIIPRQNMQHLMLRQDVMEAVKAGQFHVHAIETI 779
G VI+P N ++L D HV+ IE I
Sbjct 576 --GLNKVIVPELNYSDIILDAD----------HVNKIEII 603
>Q8NKS6 Archaeal Lon protease [Thermococcus kodakarensis (strain
ATCC BAA-918 / JCM 12380 / KOD1)]
Length=635
Score = 129 bits (325), Expect = 5e-34
Identities = 120/442 (27%), Positives = 213/442 (48%), Gaps = 50/442 (11%)
Query 362 LLGHV--EQLTQNGTITTDFTLIRPGSLHQANGGFLMLEAEQLLEQPYAWQGLKRALKSG 419
LLG V + G T + PG +H+A+ G L ++ L +LK
Sbjct 205 LLGDVRHDPFQSGGLGTPAHERVEPGMIHRAHKGVLFIDEIATL-----------SLKMQ 253
Query 420 QLKLSSL-EHMLTLTGSISIEPAAV----PLDLKVILMAEPEIYYEILEVEPELGSVFK- 473
Q L+++ E +TG + A+ P+ IL+A + I ++ P L S +
Sbjct 254 QSLLTAMQEKKFPITGQSEMSSGAMVRTEPVPCDFILVAAGNLD-TIDKMHPALRSRIRG 312
Query 474 ------IRADFTDTLQRNETNEQAYMQLIADYVQADKLLP-FDRSALAALLTDSSRQAED 526
+R DT++ N + +Q +A V+ D +P F R A+ ++ ++ ++A
Sbjct 313 YGYEVYMRTTMPDTIE----NRRKLVQFVAQEVKRDGKIPHFTREAVEEIVREAQKRAGR 368
Query 527 QSSLSLHASTLGDLIREAHHHAFKSGDKIVSDHHINLALQHRQYRLGYLRELYWQDLSRG 586
+ L+L LG ++R A A K G K V + A++ + L + Y ++ +
Sbjct 369 KGHLTLRLRDLGGIVRAAGDIAIKKGKKYVEREDVLEAMRMAKPLEKQLADWYIEN-KKE 427
Query 587 TQLIETRGHRLGQINALSVI-HYADVEFGLPSRLTASVYQGGGDILDIERSVELGGSLHA 645
Q+I+T G +G++N L+VI + + + + + + + G I+ + G +
Sbjct 428 YQVIKTEGGEIGRVNGLAVIGEQSGIVLPIEAVVAPAASKEEGKIIVTGKL----GEIAK 483
Query 646 KGVLLMSSFLKAHFGRSQILHFSAALAFEQSYGQVDGDSATVAELSALISAISQLPIDQS 705
+ V +S+ +K + G I + + F Q+Y V+GDSA+++ +A+ISA+ +PI Q
Sbjct 484 EAVQNVSAIIKRYKGED-ISRYDIHVQFLQTYEGVEGDSASISVATAVISALENIPIRQD 542
Query 706 WAITGSMNQLGQVQPIGGVNAKIEGFYDACKLQGLTGKQGVIIPRQNMQHLMLRQDVMEA 765
A+TGS++ G+V PIGG KIE +A G + VIIP+ N + + L D
Sbjct 543 VAMTGSLSVRGEVLPIGGATPKIEAAIEA-------GIKKVIIPKANEKDVFLSPD---- 591
Query 766 VKAGQFHVHAIETIDQALEILM 787
KA + ++ +ETIDQ LEI +
Sbjct 592 -KAEKIEIYPVETIDQVLEIAL 612
>Q9UYC6 Archaeal Lon protease [Pyrococcus abyssi (strain GE5 /
Orsay)]
Length=998
Score = 130 bits (326), Expect = 1e-33
Identities = 120/457 (26%), Positives = 216/457 (47%), Gaps = 56/457 (12%)
Query 353 FEDFPTHYNLLGHVEQLTQNGTI--------TTDFTLIRPGSLHQANGGFLMLEAEQLLE 404
+ED YNL L NG T + PG +H+A+ G L ++ L
Sbjct 528 WEDVEVTYNLTTEKGNLLANGLFVKNSGGLGTPAHLRVEPGMIHRAHKGVLFIDEIATL- 586
Query 405 QPYAWQGLKRALKSGQLKLSSL-EHMLTLTGSISIEPAAV----PLDLKVILMAEPEIYY 459
+LK Q L+++ E +TG + A+ P+ IL+A +
Sbjct 587 ----------SLKMQQSLLTAMQEKKFPITGQSELSSGAMVRTEPVPCDFILVAAGNLD- 635
Query 460 EILEVEPELGSVFK-------IRADFTDTLQRNETNEQAYMQLIADYVQADKLLP-FDRS 511
I ++ P L S + +R DT++ N + +Q +A V+ D +P F R
Sbjct 636 TIEKMHPALRSRIRGYGYEVYMRTTMPDTVE----NRRKLVQFVAQEVKKDGRIPHFTRD 691
Query 512 ALAALLTDSSRQAEDQSSLSLHASTLGDLIREAHHHAFKSGDKIVSDHHINLALQHRQYR 571
A+ ++ ++ R+A + L+L LG ++R A A + G K V+ + ALQ +
Sbjct 692 AVEEIIREAQRRAGRKGHLTLRLRDLGGVVRAAGDIAVRKGKKYVTREDVLEALQMAKPL 751
Query 572 LGYLRELYWQDLSRGTQLIETRGHRLGQINALSVI-HYADVEFGLPSRLTASVYQGGGDI 630
L + Y + + Q+I T G +G++N L++I + + + + + + + G I
Sbjct 752 EKQLADWYIER-KKEYQVIRTEGGEIGRVNGLAIIGEQSGIVLPIEAIVAPAASKEEGKI 810
Query 631 LDIERSVELGGSLHAKGVLLMSSFLKAHFGRSQILHFSAALAFEQSYGQVDGDSATVAEL 690
+ + G + + VL +S+ +K + G I + + F Q+Y V+GDSA+++
Sbjct 811 IVTGKL----GEIAREAVLNVSAIIKRYKGED-ISRYDIHVQFLQTYEGVEGDSASISVA 865
Query 691 SALISAISQLPIDQSWAITGSMNQLGQVQPIGGVNAKIEGFYDACKLQGLTGKQGVIIPR 750
+A+ISA+ ++P+ Q A+TGS++ G+V P+GGV KIE +A G + VIIP+
Sbjct 866 TAVISALEEIPVRQDVAMTGSLSVRGEVLPVGGVTPKIEAAIEA-------GIKKVIIPK 918
Query 751 QNMQHLMLRQDVMEAVKAGQFHVHAIETIDQALEILM 787
N + + L D E ++ + +E ID+ LE+ +
Sbjct 919 ANEKDVFLSPDKREKIE-----IIPVERIDEVLEVAL 950
Score = 21.9 bits (45), Expect = 2.4
Identities = 13/51 (25%), Positives = 23/51 (45%), Gaps = 0/51 (0%)
Query 189 ELTKEGEELDLKLISRNEEHCFVPVHLKDDQVHEMTQNEIEALSSKERAEI 239
E+T E +DL + E VP L D + + E+ ++K+R +
Sbjct 15 EMTMGEERMDLGIEFETTEEIPVPERLIDQVIGQDHAVEVIKTAAKQRRHV 65
>O29883 Archaeal Lon protease [Archaeoglobus fulgidus (strain
ATCC 49558 / DSM 4304 / JCM 9628 / NBRC 100126 / VC-16)]
Length=621
Score = 125 bits (314), Expect = 1e-32
Identities = 124/459 (27%), Positives = 217/459 (47%), Gaps = 46/459 (10%)
Query 340 IVTNKPNSGAPVIFEDFPTHYN--LLGHV--EQLTQNGTITTDFTLIRPGSLHQANGGFL 395
+V N AP FED + L G V + G T + G++H+A+ G L
Sbjct 171 LVDNSDKVTAP--FEDATGAHAGALFGDVRHDPFQSGGLETPAHERVEAGAIHRAHKGVL 228
Query 396 MLEAEQLLEQPYAWQGLKRALKSGQLKLSSLEHM-LTLTGSISIEPAAV----PLDLKVI 450
++ L ++S Q L++L+ +TG A+ P+ I
Sbjct 229 YIDEINTL-----------TIESQQKLLTALQDKKFPITGQSERSSGAMVRTEPVPCDFI 277
Query 451 LMAEPEIYYEILEVEPELGSVFK---IRADFTDTLQRNETNEQAYMQLIADYVQADKLLP 507
L+A + ++ + P L S + DT+ N Q ++ +A V D +P
Sbjct 278 LVAAGNLD-ALMGMHPALRSRIEGYGYEVYMNDTMPDTPENRQKLVRFVAQEVVKDGKIP 336
Query 508 -FDRSALAALLTDSSRQAEDQSSLSLHASTLGDLIREAHHHAFKSGDKIVSDHHINLALQ 566
FD+ A+A ++ ++ R+A ++ L+L LG L+R A A G IV H+ A +
Sbjct 337 HFDKYAVAEIIKEARRRAGRRNHLTLRLRELGGLVRTAGDIAKSEGSDIVRLEHVLKAKK 396
Query 567 HRQYRLGYLRELYWQDLSRGTQLIETRGHRLGQINALSVI-HYADVEFGLPSRLTASVYQ 625
+ L + Y + + +L T G+ +G++N L+VI A + + + +T S+ +
Sbjct 397 IAKTIEEQLADKYIER-RKDYKLFITEGYEVGRVNGLAVIGESAGIVLPIIAEVTPSMSK 455
Query 626 GGGDILDIERSVELGGSLHAKGVLLMSSFLKAHFGRSQILHFSAALAFEQSYGQVDGDSA 685
G ++ R E+ + V+ +S+ +K + GR I + + F +Y V+GDSA
Sbjct 456 SEGRVIATGRLQEIA----REAVMNVSAIIKKYTGRD-ISNMDVHIQFVGTYEGVEGDSA 510
Query 686 TVAELSALISAISQLPIDQSWAITGSMNQLGQVQPIGGVNAKIEGFYDACKLQGLTGKQG 745
+++ +A+ISAI +P+DQS A+TGS++ G+V P+GGV KIE A G +
Sbjct 511 SISIATAVISAIEGIPVDQSVAMTGSLSVKGEVLPVGGVTQKIEAAIQA-------GLKK 563
Query 746 VIIPRQNMQHLMLRQDVMEAVKAGQFHVHAIETIDQALE 784
VIIP+ N+ ++L +A G+ V + I++ LE
Sbjct 564 VIIPKDNIDDVLL-----DAEHEGKIEVIPVSRINEVLE 597
Score = 26.9 bits (58), Expect = 0.066
Identities = 21/80 (26%), Positives = 35/80 (44%), Gaps = 5/80 (6%)
Query 62 LNNFLGQDRAKASVEAGISLPYSGYNIFAVGTAGLGKRTMIKRLLQQHAKSMPTPDDWVY 121
++ +GQD A VEA ++ +G+ G GK + K + + K +D +
Sbjct 27 IDQVIGQDHA---VEAIKKAAVQKRHVMLIGSPGTGKSMLAKAMAELLPKE--ELEDILV 81
Query 122 VNNFKNARQPLALRFPAGSG 141
N ++ QP PAG G
Sbjct 82 YPNPQDPNQPKIRLVPAGKG 101
>P58274 Archaeal Lon protease [Thermoplasma volcanium (strain
ATCC 51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1)]
Length=655
Score = 125 bits (314), Expect = 1e-32
Identities = 111/439 (25%), Positives = 203/439 (46%), Gaps = 38/439 (9%)
Query 362 LLGHV--EQLTQNGTITTDFTLIRPGSLHQANGGFLMLEAEQLLEQPYAWQGLKRALKSG 419
LLG V + G T + G++H+A+ G L ++ LL +P Q + AL+
Sbjct 203 LLGDVRHDPFQSGGLETPAHERVEAGNIHKAHKGVLFIDEINLL-RPEDQQAILTALQEK 261
Query 420 QLKLSSLEHMLTLTGSISIEPAAVPLDLKVILMAEPEIYYEILEVEPELGSVFK---IRA 476
+ +S + ++ VP D ++ Y I + P L S +
Sbjct 262 KYPISGQSER---SAGAMVQTEPVPCDFVLVAAGN---YDAIRNMHPALRSRIRGYGYEV 315
Query 477 DFTDTLQRNETNEQAYMQLIADYVQADKLLP-FDRSALAALLTDSSRQAEDQSSLSLHAS 535
D + N+ N + +Q IA V+ DK +P FD+SA+ ++ ++ +++ ++ L+L
Sbjct 316 VVNDYMDDNDENRKKLVQFIAQEVEKDKKIPHFDKSAIVEIIKEAQKRSGRRNKLTLRLR 375
Query 536 TLGDLIREAHHHAFKSGDKIVSDHHINLALQHRQYRLGYLRELYWQDLSRGTQLIETRGH 595
LG L+R A A IV+ + +A + L ++ + + T G
Sbjct 376 ELGGLVRVAGDIAVSQKRNIVTASDV-IAAKALSKPLEQQIADKSIEIKKIYKTFRTEGS 434
Query 596 RLGQINALSVI-------HYADVEFGLPSRLTASVYQGGGDILDIERSVELGGSLHAKGV 648
+G +N L+V+ Y V + + +T + ++G G+I+ + G + + V
Sbjct 435 VVGMVNGLAVVGADTGMAEYTGVVLPIVAEVTPAEHKGAGNIIATGKL----GDIAKEAV 490
Query 649 LLMSSFLKAHFGRSQILHFSAALAFEQSYGQVDGDSATVAELSALISAISQLPIDQSWAI 708
L +S+ K G+ I + + F +Y V+GDSA+V+ +A+ISAI +P+DQS A+
Sbjct 491 LNVSAVFKKITGKD-ISNMDIHIQFVGTYEGVEGDSASVSIATAVISAIENIPVDQSVAM 549
Query 709 TGSMNQLGQVQPIGGVNAKIEGFYDACKLQGLTGKQGVIIPRQNMQHLMLRQDVMEAVKA 768
TGS++ G V P+GGV AK+E +A G VI+P N + +++A
Sbjct 550 TGSLSVRGDVLPVGGVTAKVEAAIEA-------GMAKVIVPELNYNDI-----ILDAEHI 597
Query 769 GQFHVHAIETIDQALEILM 787
+ + TI+ L++ +
Sbjct 598 NRIQIIPARTIEDVLKVAL 616
>O58221 Archaeal Lon protease [Pyrococcus horikoshii (strain ATCC
700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)]
Length=1127
Score = 122 bits (305), Expect = 4e-31
Identities = 113/438 (26%), Positives = 211/438 (48%), Gaps = 41/438 (9%)
Query 361 NLLGHVEQLTQNGTITTDFTL-IRPGSLHQANGGFLMLEAEQLLEQPYAWQGLKRALKSG 419
NLL + + +G + T L + PG +H+A+ G L ++ L +LK
Sbjct 674 NLLANGLFVKNSGGLGTPAHLRVEPGMIHRAHKGVLFIDEIATL-----------SLKMQ 722
Query 420 QLKLSSL-EHMLTLTGSISIEPAAV----PLDLKVILMAEPEIYYEILEVEPELGSVFK- 473
Q L+++ E +TG + A+ P+ IL+A + I ++ P L S +
Sbjct 723 QSLLTAMQEKKFPITGQSELSSGAMVRTEPVPCDFILVAAGNLD-TIEKMHPALRSRIRG 781
Query 474 --IRADFTDTLQRNETNEQAYMQLIADYVQADKLLP-FDRSALAALLTDSSRQAEDQSSL 530
T+ N + +Q +A V+ D +P F R A+ ++ ++ R+A + L
Sbjct 782 YGYEVYMRTTMPDTPENRRKLVQFVAQEVKKDGRIPHFTRDAVEEIVREAQRRAGRKGHL 841
Query 531 SLHASTLGDLIREAHHHAFKSGDKIVSDHHINLALQHRQYRLGYLRELYWQDLSRGTQLI 590
+L LG ++R A A + G K V+ + AL+ + L + Y + + Q+I
Sbjct 842 TLRLRDLGGVVRAAGDIAVRKGKKYVTREDVLEALKLAKPLEKQLADWYIER-KKEYQVI 900
Query 591 ETRGHRLGQINALSVI-HYADVEFGLPSRLTASVYQGGGDILDIERSVELGGSLHAKGVL 649
G +G++N L++I + + + + + + + G I+ + G + + VL
Sbjct 901 RVEGGEIGRVNGLAIIGEQSGIVLPIEAIVAPAASKEEGKIIVTGKL----GEIAKEAVL 956
Query 650 LMSSFLKAHFGRSQILHFSAALAFEQSYGQVDGDSATVAELSALISAISQLPIDQSWAIT 709
+S+ +K + G I + + F Q+Y V+GDSA+++ +A+ISA+ ++P+ Q A+T
Sbjct 957 NVSAIIKRYKGED-ISKYDIHVQFLQTYEGVEGDSASISVATAVISALEEIPVRQDVAMT 1015
Query 710 GSMNQLGQVQPIGGVNAKIEGFYDACKLQGLTGKQGVIIPRQNMQHLMLRQDVMEAVKAG 769
GS++ G+V P+GGV KIE +A G + VIIP+ N + + L D + +K
Sbjct 1016 GSLSVRGEVLPVGGVTPKIEAAIEA-------GIKTVIIPKSNEKDVFLSPDKRKKIK-- 1066
Query 770 QFHVHAIETIDQALEILM 787
+ +E ID+ LE+ +
Sbjct 1067 ---IIPVERIDEVLEVAL 1081
>O26878 Archaeal Lon protease [Methanothermobacter thermautotrophicus
(strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330
/ Delta H)]
Length=644
Score = 117 bits (293), Expect = 4e-30
Identities = 113/453 (25%), Positives = 211/453 (47%), Gaps = 34/453 (8%)
Query 340 IVTNKPNSGAPVIFEDFPTHYNLLGHV--EQLTQNGTITTDFTLIRPGSLHQANGGFLML 397
+V N+ AP + LLG V + G T + G +H+AN G L +
Sbjct 186 LVNNEGRQVAPFVDATGAHAGALLGDVRHDPYQSGGLGTPAHERVEAGMIHKANKGVLYI 245
Query 398 EAEQLLEQPYAWQGLKRALKSGQLKLSSLEHMLTLTGSISIEPAAVPLDLKVILMAEPEI 457
+ ++ + + L + Q K S+ + + AVP D +L+A +
Sbjct 246 DEIGTMKM----KTQQELLTAMQEKRYSITGQSETSSGAMVRSQAVPCDF--VLVASGNL 299
Query 458 YYEILE-VEPELGSVFK---IRADFTDTLQRNETNEQAYMQLIADYVQADKLLP-FDRSA 512
++LE + P L S + DT+ N +Q +A V+ D +P F R A
Sbjct 300 --QVLEGMHPALRSRIRGYGYEVFMKDTMPDTPENRDKLVQFVAQEVEKDGRIPHFSREA 357
Query 513 LAALLTDSSRQAEDQSSLSLHASTLGDLIREAHHHAFKSGDKIVSDHHINLALQHRQYRL 572
+ ++ ++ R+A + SL+L LG L+R A A G ++V + A + +
Sbjct 358 VEEIIREAQRRAGKKDSLTLKLRELGGLVRAAGDIAKSRGAELVETEDVIEAKKLSRTLE 417
Query 573 GYLRELYWQDLSRGTQLIETRGHRLGQINALSVI-HYADVEFGLPSRLTASVYQGGGDIL 631
+ + Y + + + ++ G +G++N L++I + + + + + + G I+
Sbjct 418 QQIADRYIVQKKKYS-VFKSEGGEVGRVNGLAIIGDRSGIILPIAAEAAPAQSKEEGRII 476
Query 632 DIERSVELGGSLHAKGVLLMSSFLKAHFGRSQILHFSAALAFEQSYGQVDGDSATVAELS 691
+ G + + V +S+ +K + G + I ++ + F Q+Y V+GDSA+V+ +
Sbjct 477 ATGKL----GEIAREAVQNVSALIKKYTG-TDISNYDIHIQFLQAYDGVEGDSASVSVAT 531
Query 692 ALISAISQLPIDQSWAITGSMNQLGQVQPIGGVNAKIEGFYDACKLQGLTGKQGVIIPRQ 751
A+ISA+ ++P+DQS A+TGS++ G V P+GGV KIE +A G + V+IP
Sbjct 532 AVISALEEIPVDQSVALTGSLSIRGDVLPVGGVTGKIEAAAEA-------GIRKVLIPAS 584
Query 752 NMQHLMLRQDVMEAVKAGQFHVHAIETIDQALE 784
NM +M+ + + V+ + +ET+ LE
Sbjct 585 NMGDVMIEKKYEDMVE-----IVPVETLGDVLE 612
Score = 28.1 bits (61), Expect = 0.029
Identities = 20/84 (24%), Positives = 37/84 (44%), Gaps = 9/84 (11%)
Query 62 LNNFLGQDRAKASVEAGISLPYSGYNIFAVGTAGLGKRTMIKRLLQQHAKSMPTPD--DW 119
++ +GQ+ A +++ N+ +G G+GK + K + A+ +P D
Sbjct 44 IDQIIGQEEAVETIKKAAE---QRRNVLLIGEPGVGKSMLAKAM----AELLPREQLQDI 96
Query 120 VYVNNFKNARQPLALRFPAGSGPK 143
+ N ++ PL PAG G K
Sbjct 97 LVYPNIEDPNNPLIGAVPAGEGRK 120
>Q9HSC3 Archaeal Lon protease [Halobacterium salinarum (strain
ATCC 700922 / JCM 11081 / NRC-1)]
Length=702
Score = 101 bits (251), Expect = 7e-25
Identities = 120/471 (25%), Positives = 203/471 (43%), Gaps = 45/471 (10%)
Query 329 NRVPSRYQANTIVTNKPNSGAPVIFEDFPTHYN--LLGHV--EQLTQNGTITTDFTLIRP 384
NR ++ N AP FED + +LG V + G T +
Sbjct 224 NRGSDAMVPKLLINNADRQVAP--FEDATGAHAGAMLGDVRHDPFQSGGMATPSHERVEA 281
Query 385 GSLHQANGGFLMLEAEQLLEQPYAWQGLKRALKSGQLKLSSLEHMLTLTGSISIEPAAVP 444
GS+ +AN G L ++ L+ + Q L A++ G+ ++ + ++ AVP
Sbjct 282 GSIQKANKGVLFIDEINTLDVR-SQQKLMTAIQEGEFSITGQSER---SSGAMVQTEAVP 337
Query 445 LDLKVILMAEPEIYYEILEVEPELGSVFK---IRADFTDTLQRNETNEQAYMQLIADYVQ 501
D ++ + + + P L S K DT++ + Y + +A V+
Sbjct 338 CDFIMVAAGNMDA---MENMHPALRSRIKGYGYEVYMDDTIEDTPDMRRKYARFVAQEVE 394
Query 502 ADKLLP-FDRSALAALLTDSSRQAEDQSSLSLHASTLGDLIREAHHHAFKSGDKIVSDHH 560
D LP F A+ L+ ++ R+A + SL+L LG L+R A A G +
Sbjct 395 KDGNLPHFAPDAIRELILEAKRRAGRKDSLTLKLRDLGGLVRVAGDIARSEGHDLTQRSD 454
Query 561 INLALQH-----RQYRLGYLRELYWQDLSRGTQLIETRGHRLGQINALSVIHYADVEFGL 615
+ A + +Q+ Y++ +D GT T +G++N L+V+ D L
Sbjct 455 VLEAKKRSRSIEQQFVDNYIQRR--KDYELGT----TSEEAVGRVNGLAVMG-GDSGIML 507
Query 616 P--SRLTASVYQGGGDILDIERSVELGGSLHAKGVLLMSSFLKAHFGRSQILHFSAALAF 673
P + +T + Q G I + E+ + V +S+ +K F + + F
Sbjct 508 PVMAEITPAQSQEEGRIYATGQLKEMA----EEAVENVSAIIKK-FSDENMSEKDTHIQF 562
Query 674 EQS-YGQVDGDSATVAELSALISAISQLPIDQSWAITGSMNQLGQVQPIGGVNAKIEGFY 732
Q+ G VDGDSA++ +A+ISA+ +P+ Q A+TGS++ G V P+GGV KIE
Sbjct 563 VQAGEGGVDGDSASITVATAVISALEDIPVAQELAMTGSLSVRGDVLPVGGVTHKIEAAA 622
Query 733 DACKLQGLTGKQGVIIPRQNMQHLMLRQDVMEAVKAGQFHVHAIETIDQAL 783
A G + VIIP+ N +M+ + E ++ H E +D AL
Sbjct 623 KA-------GCERVIIPKANEDDVMIEDEYEEQIEIIPV-THISEVLDVAL 665
Score = 21.2 bits (43), Expect = 4.0
Identities = 13/60 (22%), Positives = 28/60 (47%), Gaps = 6/60 (10%)
Query 173 EQIRQETGQEQQEALVELTKEGEELDLKLISRNEEHCFVPVHLKDDQVHEMTQNEIEALS 232
+ + E E+Q ++ +T E LD+ L+ E+ V D++ +T +++ S
Sbjct 637 DDVMIEDEYEEQIEIIPVTHISEVLDVALVGEPEKDSLV------DRLKSITGKALDSAS 690
>Q58812 Archaeal Lon protease [Methanocaldococcus jannaschii (strain
ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)]
Length=649
Score = 77.8 bits (190), Expect = 1e-17
Identities = 103/451 (23%), Positives = 189/451 (42%), Gaps = 73/451 (16%)
Query 385 GSLHQANGGFLMLEAEQLLEQPYAWQG-LKRALKSGQLKLSSLEHMLTLTGSISIEPAAV 443
G++H+A+ G L ++ ++ P Q + AL+ QL +S + ++E +
Sbjct 229 GAIHEAHRGILYVD--EIKTMPLEVQDYILTALQDKQLPISGRNPN---SSGATVETNPI 283
Query 444 PLDLKVILMAEPEIYYEILEVEPELGSV-FKI--RADFTDTLQRNETNEQAYMQLIADYV 500
P D +I+ + Y + P L + +KI + +TL+ N +Q I +
Sbjct 284 PCDFILIMSGNMDDVYNLRA--PLLDRIDYKIVLKNKMDNTLE----NRDKLLQFIVQEI 337
Query 501 QADKLLPFDRSALAALLTDSSRQAEDQSSLSLHASTLGDLIREAHHHAF----------- 549
+ + L P ++ + A + L+L L ++I+ A+ A
Sbjct 338 KNNNLNPMTYDGCCEVVRIAQYLAGSKDKLTLRLRLLANIIKMANDVAMGKDVEELLGNF 397
Query 550 -------------KSGDKIVSDHHINLALQHRQYRLGYLREL-YWQDLSRGTQLIETRGH 595
KS ++ H+ Y + L Y ++ R ++
Sbjct 398 DDKGEYHPETQKDKSNKVYITAEHVRKVFDTGIYSMEKQVALNYIKNFKRYKHIVPNDEP 457
Query 596 RLGQINALSVIHYADVEFGLPSRLTASVYQG---GGDILDI-----ERSVELGGSLHAKG 647
++G I L+V+ + G +++ + + G +L+I + S+ L +L K
Sbjct 458 KVGVIYGLAVLGAGGI--GDVTKIIVQILESKNPGTHLLNISGDIAKHSITLASALSKK- 514
Query 648 VLLMSSFLKAHFGRSQILHFSAALAFEQSYGQVDGDSATVAELSALISAISQLPIDQSWA 707
L+ L + + + F QSY ++DGDSAT A A+ISA+ +P+ Q +A
Sbjct 515 -LVAEKKLPLPKKDIDLNNKEIYIQFSQSYSKIDGDSATAAVCLAIISALLDIPLKQDFA 573
Query 708 ITGSMNQLGQVQPIGGVNAKIEGFYDACKLQGLTGKQGVIIPRQNMQHLMLRQDVMEAVK 767
ITGS++ G V IGGVN KIE A K G + VIIP NM ++ ++
Sbjct 574 ITGSLDLSGNVLAIGGVNEKIE----AAKRYGF---KRVIIPEANM---------IDVIE 617
Query 768 AGQFHVHAIETIDQALEILMARPVGTLDKKG 798
+ ++T+D+ + + V LD +G
Sbjct 618 TEGIEIIPVKTLDEIVPL-----VFDLDNRG 643
>P42425 Lon protease 2 [Bacillus subtilis (strain 168)]
Length=552
Score = 60.5 bits (145), Expect = 3e-12
Identities = 37/111 (33%), Positives = 62/111 (56%), Gaps = 15/111 (14%)
Query 680 VDGDSATVAELSALISAISQLPIDQSWAITGSMNQLGQVQPIGGVNAKIEGFYDACKLQG 739
+DG SA +A + + SAI ++PID + A+TG ++ G V+PIGGV KI K
Sbjct 441 IDGPSAGIAMAAGIFSAIHKIPIDNTVAMTGEISLNGLVKPIGGVIPKI-------KAAK 493
Query 740 LTGKQGVIIPRQNMQHLMLRQDVMEAVKAGQFHVHAIETIDQALEILMARP 790
+G + VIIP +N Q ++ + D +E + A++T + L+ ++ P
Sbjct 494 QSGAKKVIIPYENQQAILKQIDGIEII--------AVKTFQEVLDEILVNP 536
>P36772 Lon protease [Brevibacillus choshinensis]
Length=779
Score = 56.6 bits (135), Expect = 5e-11
Identities = 55/189 (29%), Positives = 90/189 (48%), Gaps = 29/189 (15%)
Query 625 QGGGDILDIERSVELG-GSLHAKGVL--LMSSFLKAHFG--RSQILHFSAALAFEQSY-- 677
Q GGD L++E S+ G G L G L +M +A F RS+ + F +
Sbjct 604 QAGGDTLNVEVSILAGKGKLTLTGQLGDVMKESAQAAFSYIRSRASEWGIDPEFHEKNDI 663
Query 678 ------GQV--DGDSATVAELSALISAISQLPIDQSWAITGSMNQLGQVQPIGGVNAKIE 729
G + DG SA + +AL+SA++ +P+ + +TG + G+V PIGG+ K
Sbjct 664 HIHVPEGAIPKDGPSAGITMATALVSALTGIPVKKEVGMTGEITLRGRVLPIGGLKEK-- 721
Query 730 GFYDACKLQGLTGKQGVIIPRQNMQHLMLRQDVMEAVKAGQFHVHAIETIDQAL-EILMA 788
C G +I+P+ N + + +D+ E+V+ + +E +D+ L L
Sbjct 722 -----CMSAHRAGLTTIILPKDNEKDI---EDIPESVREA-LTFYPVEHLDEVLRHALTK 772
Query 789 RPVGTLDKK 797
+PVG DKK
Sbjct 773 QPVG--DKK 779
>P74956 Lon protease [Vibrio parahaemolyticus serotype O3:K6 (strain
RIMD 2210633)]
Length=783
Score = 49.3 bits (116), Expect = 9e-09
Identities = 36/113 (32%), Positives = 60/113 (53%), Gaps = 12/113 (11%)
Query 681 DGDSATVAELSALISAISQLPIDQSWAITGSMNQLGQVQPIGGVNAKIEGFYDACKLQGL 740
DG SA A +AL+SA++ P+ A+TG + G+V PIGG+ K+ +
Sbjct 675 DGPSAGTAMCTALVSALTGNPVKAEVAMTGEITLRGEVLPIGGLKEKLLAAHRG------ 728
Query 741 TGKQGVIIPRQNMQHLMLRQDVMEAVKAGQFHVHAIETIDQALEILMAR-PVG 792
G + V+IP+ N + L +++ E V A V ++ ID+ L++ + R P G
Sbjct 729 -GIKTVLIPKDNERDL---EEIPENVIA-DLQVIPVQWIDEVLKVALERDPTG 776
>P46067 Lon protease [Erwinia amylovora]
Length=784
Score = 48.1 bits (113), Expect = 2e-08
Identities = 32/107 (30%), Positives = 57/107 (53%), Gaps = 11/107 (10%)
Query 681 DGDSATVAELSALISAISQLPIDQSWAITGSMNQLGQVQPIGGVNAKIEGFYDACKLQGL 740
DG SA +A +AL+S ++ P+ A+TG + GQV PIGG+ K+ +
Sbjct 676 DGPSAGIAMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAAHRG------ 729
Query 741 TGKQGVIIPRQNMQHLMLRQDVMEAVKAGQFHVHAIETIDQALEILM 787
G + V+IP +N + L +++ E V A +H ++ I++ L + +
Sbjct 730 -GIKTVLIPDENKRDL---EEIPENVIA-DLDIHPVKRIEEVLALAL 771
Score = 20.8 bits (42), Expect = 5.3
Identities = 17/53 (32%), Positives = 28/53 (53%), Gaps = 3/53 (6%)
Query 809 VMEQLEYWQAIEDG--DDVEGEPK-KKRKKKKREKSDSKKSVCDAEDVAQPEL 858
V E+LEY A+ + D ++ E + + R KK+ EKS + + + Q EL
Sbjct 189 VDERLEYLMAMMESEIDLLQVEKRIRNRVKKQMEKSQREYYLNEQMKAIQKEL 241
>O69177 Lon protease [Rhizobium meliloti (strain 1021)]
Length=806
Score = 48.1 bits (113), Expect = 2e-08
Identities = 33/111 (30%), Positives = 58/111 (52%), Gaps = 14/111 (13%)
Query 681 DGDSATVAELSALISAISQLPIDQSWAITGSMNQLGQVQPIGGVNAKIEGFYDACKLQGL 740
DG SA VA +A++S ++ +PI + A+TG + G+V PIGG+ K+ L+G
Sbjct 678 DGPSAGVAMATAIVSVMTGIPISKDVAMTGEITLRGRVLPIGGLKEKL-----LAALRG- 731
Query 741 TGKQGVIIPRQNMQHLMLRQD-------VMEAVKAGQFHVHAIETIDQALE 784
G + V+IP +N + L D ++ + G+ HA+ + + +E
Sbjct 732 -GIKKVLIPEENAKDLADIPDNVKNSLEIIPVSRMGEVIAHALLRLPEPIE 781
>Q2YPX3 Lon protease [Brucella abortus (strain 2308)]
Length=812
Score = 47.8 bits (112), Expect = 3e-08
Identities = 83/364 (23%), Positives = 158/364 (43%), Gaps = 45/364 (12%)
Query 410 QGLKRALKSGQLKLSSLEHMLTLTGSISIEPAAVPLDLKVILMAEPEIYY--EILEVEPE 467
Q +K+A KS L L L+ + + +P++ L+ +L E + LEVE +
Sbjct 419 QSMKKAKKSNPLFL--LDEIDKMGQDFRGDPSSAMLE---VLDPEQNATFMDHYLEVEYD 473
Query 468 LGSVFKIRADFTDTLQRNETNEQAYMQLIADYVQADKLLPFDRSALAALLTDSSRQAEDQ 527
L +V + T + + ++ IA Y + +KL R L + D + Q ++
Sbjct 474 LSNVMFVTTANTMNIPVPLLDRMEIIR-IAGYTEDEKLEIAKRHLLPKAIKDHALQPKE- 531
Query 528 SSLSLHASTLGDLIREAHHHAFKSGDKIVSDHHINLALQHRQYRLGYLRELYWQDLSRGT 587
S+ L ++IR H+ ++G + + + LA + L ++ +
Sbjct 532 --FSVTEDALRNVIR---HYTREAGVRSLEREVMTLARKAVTEILKTKKKSVKITDKNLS 586
Query 588 QLIETRGHRLGQINALSVIHYADVEFGLPSRLTASVYQGGGDILDIERSVELG-GSLHAK 646
+ R GQI+ + + G+ + L + + GG++L IE + G G +
Sbjct 587 DYLGVEKFRFGQIDG-------EDQVGVVTGLAWT--EVGGELLTIEGVMMPGKGRMTVT 637
Query 647 G----VLLMSSFLKAHFGRSQILHFSAA----------LAFEQSYGQVDGDSATVAELSA 692
G V+ S A + RS+ + F + + DG SA +A ++A
Sbjct 638 GNLRDVMKESISAAASYVRSRAIDFGIEPPLFDKRDIHVHVPEGATPKDGPSAGIAMVTA 697
Query 693 LISAISQLPIDQSWAITGSMNQLGQVQPIGGVNAKIEGFYDACKLQGLTGKQGVIIPRQN 752
++S ++ +P+ + A+TG + G+V PIGG+ K+ L+G G + V+IP +N
Sbjct 698 IVSVLTGIPVRKDIAMTGEVTLRGRVLPIGGLKEKL-----LATLRG--GIKKVLIPEEN 750
Query 753 MQHL 756
+ L
Sbjct 751 AKDL 754
Lambda K H a alpha
0.317 0.132 0.373 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 9253510
Database: 046cc65eb3835e6509139db7617651e3.SwissProt.fasta
Posted date: May 31, 2024 8:17 AM
Number of letters in database: 12,391
Number of sequences in database: 17
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
