BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 6ba9e257679a66867746fe7437089e85.SwissProt.fasta
12 sequences; 11,934 total letters
Query= ACIAD2254
Length=264
Score E
Sequences producing significant alignments: (Bits) Value
Q57239 Protein KlaA [Escherichia coli] 85.5 1e-22
Q5R9K7 Kinesin heavy chain isoform 5A [Pongo abelii] 42.7 1e-07
Q12840 Kinesin heavy chain isoform 5A [Homo sapiens] 42.7 1e-07
P33175 Kinesin heavy chain isoform 5A [Mus musculus] 40.4 8e-07
Q9DA73 Coiled-coil domain-containing protein 89 [Mus musculus] 40.0 8e-07
Q6QLM7 Kinesin heavy chain isoform 5A [Rattus norvegicus] 40.0 1e-06
P12847 Myosin-3 [Rattus norvegicus] 38.5 4e-06
P13541 Myosin-3 [Mus musculus] 38.5 4e-06
B2RZ86 Coiled-coil domain-containing protein 89 [Rattus norvegicus] 37.4 6e-06
Q7FAD5 Synaptonemal complex protein ZEP1 [Oryza sativa subsp. jap... 35.0 4e-05
Q974N4 Leucine--tRNA ligase 1 [Sulfurisphaera tokodaii (strain DS... 35.0 4e-05
Q6RI86 Transient receptor potential cation channel subfamily A me... 35.0 4e-05
>Q57239 Protein KlaA [Escherichia coli]
Length=257
Score = 85.5 bits (210), Expect = 1e-22
Identities = 62/225 (28%), Positives = 115/225 (51%), Gaps = 15/225 (7%)
Query 42 ADQLIQAQSVLLNSIDAELNYQLSHVIGLLIEKLSQSDRQLKKRKFNRLQKWLGIDLEYD 101
AD L + +++ + A L ++S ++ KL+ +D + K +K LG ++E
Sbjct 36 ADSLNELSNLMEHGAVAALADKISQIVA----KLADADPRKIAEKPTWFEKMLGREVERQ 91
Query 102 QNQLHYFNALQSLIDEANTLSQRLQVEIQKSQARVQQLLGLREQMATYIVAAKEFLNEYP 161
L L+DEA ++QR++ ++ + +++ YI A +EFL+E P
Sbjct 92 VRYQVARKTLDQLLDEAEGVAQRVRDTLRALDDMLNTHEAEVDRLRAYIQAGREFLDENP 151
Query 162 EFVNHRHPLDNF---QERLSKKINTLHTLQVSNDIAITQMQLAQQLSFTLLDRFKEAQQV 218
E + + F +ER ++K+ L TL S+++++TQM+L + + +LDRF E V
Sbjct 152 EAGAAKAGVIEFDKPRERFARKLANLATLMASHEMSVTQMKLTRAQAVDMLDRFSETASV 211
Query 219 LIPAWQYH-----LKQSMQTASVSELQKLDRSRDNLLNTLKQSLD 258
L+P W+ H ++M A V+E K ++ L+ +L QSL+
Sbjct 212 LVPVWRQHTLALITTKNMNPAMVAEAAKAHQA---LMRSLSQSLE 253
Score = 20.0 bits (40), Expect = 2.0
Identities = 11/48 (23%), Positives = 24/48 (50%), Gaps = 0/48 (0%)
Query 14 ETDPKIVLSIKRNDLVPLLDDQYRLNHFADQLIQAQSVLLNSIDAELN 61
E + ++ + R L LLD+ + ++A +LN+ +AE++
Sbjct 87 EVERQVRYQVARKTLDQLLDEAEGVAQRVRDTLRALDDMLNTHEAEVD 134
>Q5R9K7 Kinesin heavy chain isoform 5A [Pongo abelii]
Length=1032
Score = 42.7 bits (99), Expect = 1e-07
Identities = 28/125 (22%), Positives = 60/125 (48%), Gaps = 11/125 (9%)
Query 72 IEKLSQSDRQLKKRKFNRLQKWLGIDLEYDQNQLHY--------FNALQSLIDEANTLSQ 123
+ +++ D++ + + ++K L + +E + H N Q IDE L+Q
Sbjct 677 VHEVALKDKEPDTQDADEVKKALELQMESHREAHHRQLARLRDEINEKQKTIDELKDLNQ 736
Query 124 RLQVEIQKSQARVQQLLGLREQMATYIVAAKEFLNEYPEFVNHRHPLDNFQERLSKKINT 183
+LQ+E++K QA ++L + +T + +E Y + L +E +++++ T
Sbjct 737 KLQLELEKLQADYEKLKSEEHEKSTKL---QELTFLYERHEQSKQDLKGLEETVARELQT 793
Query 184 LHTLQ 188
LH L+
Sbjct 794 LHNLR 798
>Q12840 Kinesin heavy chain isoform 5A [Homo sapiens]
Length=1032
Score = 42.7 bits (99), Expect = 1e-07
Identities = 28/125 (22%), Positives = 60/125 (48%), Gaps = 11/125 (9%)
Query 72 IEKLSQSDRQLKKRKFNRLQKWLGIDLEYDQNQLHY--------FNALQSLIDEANTLSQ 123
+ +++ D++ + + ++K L + +E + H N Q IDE L+Q
Sbjct 677 VHEVALKDKEPDTQDADEVKKALELQMESHREAHHRQLARLRDEINEKQKTIDELKDLNQ 736
Query 124 RLQVEIQKSQARVQQLLGLREQMATYIVAAKEFLNEYPEFVNHRHPLDNFQERLSKKINT 183
+LQ+E++K QA ++L + +T + +E Y + L +E +++++ T
Sbjct 737 KLQLELEKLQADYEKLKSEEHEKSTKL---QELTFLYERHEQSKQDLKGLEETVARELQT 793
Query 184 LHTLQ 188
LH L+
Sbjct 794 LHNLR 798
>P33175 Kinesin heavy chain isoform 5A [Mus musculus]
Length=1027
Score = 40.4 bits (93), Expect = 8e-07
Identities = 27/125 (22%), Positives = 58/125 (46%), Gaps = 11/125 (9%)
Query 72 IEKLSQSDRQLKKRKFNRLQKWLGIDLEYDQNQLHY--------FNALQSLIDEANTLSQ 123
+ +++ D++ + ++K L + +E + H N Q IDE L+Q
Sbjct 677 VHEVALKDKEPDTQDAEEVKKALELQMENHREAHHRQLARLRDEINEKQKTIDELKDLNQ 736
Query 124 RLQVEIQKSQARVQQLLGLREQMATYIVAAKEFLNEYPEFVNHRHPLDNFQERLSKKINT 183
+LQ+E++K QA ++L + + + +E Y + L +E +++++ T
Sbjct 737 KLQLELEKLQADYERLKNEENEKSAKL---QELTFLYERHEQSKQDLKGLEETVARELQT 793
Query 184 LHTLQ 188
LH L+
Sbjct 794 LHNLR 798
>Q9DA73 Coiled-coil domain-containing protein 89 [Mus musculus]
Length=370
Score = 40.0 bits (92), Expect = 8e-07
Identities = 33/135 (24%), Positives = 62/135 (46%), Gaps = 7/135 (5%)
Query 112 QSLIDEANTLSQRLQVEIQKSQARVQQLLGLREQMATYIVAAKEFLNEYPEFV--NHRHP 169
++L++E L QR E ++QAR ++LLGL+ Q A E L + + H+
Sbjct 180 KALVEELEVLKQRCAHEASQAQAREEELLGLQNQQACDHAKETEELRSQLQSIKQQHQQA 239
Query 170 LDNFQERLSKKINTLHTLQVSNDIAITQMQLAQQLSFTLLDRFKEAQQVLIPAWQYHLKQ 229
+ + +N LQ + + + QLS ++R K Q Q L++
Sbjct 240 TEQMGKEQEANLNLNQELQARLQTVLREKEELLQLS---MERGKVLQNKQAEIRQ--LEE 294
Query 230 SMQTASVSELQKLDR 244
++TA++++ L+R
Sbjct 295 KLETAAMAKKHALER 309
Score = 18.1 bits (35), Expect = 8.6
Identities = 13/44 (30%), Positives = 22/44 (50%), Gaps = 3/44 (7%)
Query 24 KRNDLVPLLDDQYRLNHFADQLIQAQSVLLNSIDAELNYQLSHV 67
+R D + D+ RL + + S+ L S + ELN +L H+
Sbjct 328 RRVDGIQKAYDELRLQ---SEAFKKHSLDLLSKERELNAKLRHL 368
>Q6QLM7 Kinesin heavy chain isoform 5A [Rattus norvegicus]
Length=1027
Score = 40.0 bits (92), Expect = 1e-06
Identities = 27/125 (22%), Positives = 57/125 (46%), Gaps = 11/125 (9%)
Query 72 IEKLSQSDRQLKKRKFNRLQKWLGIDLEYDQNQLHY--------FNALQSLIDEANTLSQ 123
+ +++ D++ + ++K L + +E + H N Q IDE L Q
Sbjct 677 VHEVALKDKEPDTQDAEEVKKALELQMENHREAHHRQLARLRDEINEKQKTIDELKDLDQ 736
Query 124 RLQVEIQKSQARVQQLLGLREQMATYIVAAKEFLNEYPEFVNHRHPLDNFQERLSKKINT 183
+LQ+E++K QA ++L + + + +E Y + L +E +++++ T
Sbjct 737 KLQLELEKLQADYERLKNEENEKSAKL---QELTFLYERHEQSKQDLKGLEETVARELQT 793
Query 184 LHTLQ 188
LH L+
Sbjct 794 LHNLR 798
>P12847 Myosin-3 [Rattus norvegicus]
Length=1940
Score = 38.5 bits (88), Expect = 4e-06
Identities = 33/110 (30%), Positives = 58/110 (53%), Gaps = 17/110 (15%)
Query 46 IQAQSVLLNSIDAELNYQLSHVIGLLIEKLSQS-----DRQLKKRKFN---RLQKWLGID 97
+QA+ +NS+ ++L +L + L L Q D + KRK +L + +D
Sbjct 1011 LQAEEDKVNSL-SKLKSKLEQQVDDLESSLEQEKKLRVDLERNKRKLEGDLKLAQESILD 1069
Query 98 LEYDQNQLHY--------FNALQSLIDEANTLSQRLQVEIQKSQARVQQL 139
LE D+ QL ++ LQS +++ TLS +LQ +I++ QAR+++L
Sbjct 1070 LENDKQQLDERLKKKDFEYSQLQSKVEDEQTLSLQLQKKIKELQARIEEL 1119
Score = 21.2 bits (43), Expect = 1.0
Identities = 41/187 (22%), Positives = 79/187 (42%), Gaps = 29/187 (16%)
Query 74 KLSQSDRQLKKRKFNRLQKWLGIDLEYDQNQLHYFNALQSLIDEANTLSQRLQVEIQKS- 132
+LS ++RQ + ++ + + QLH +AL+ D L ++L + +++
Sbjct 1629 QLSHANRQAAET----IKHLRSVQGQLKDTQLHLDDALRGQED----LKEQLAIVERRAN 1680
Query 133 --QARVQQLLGLREQMATYIVAAKEFLNEYPEFVNHRHPLDNFQERLSKKINTLHTLQVS 190
QA V++L EQ A++ L + E V H + KK+ T
Sbjct 1681 LLQAEVEELRATLEQTERARKLAEQELLDSNERVQLLHTQNTSLIHTKKKLET------- 1733
Query 191 NDIAITQMQL-AQQLSFTLLDRFKEAQQVLIPAWQY--HLKQSMQTASVSELQKLDRSRD 247
+TQ+Q + S + ++A++ + A LK+ T++ L+R +
Sbjct 1734 ---DLTQLQSEVEDASRDARNAEEKAKKAITDAAMMAEELKKEQDTSA-----HLERMKK 1785
Query 248 NLLNTLK 254
NL T+K
Sbjct 1786 NLEQTVK 1792
Score = 20.0 bits (40), Expect = 2.4
Identities = 41/176 (23%), Positives = 78/176 (44%), Gaps = 25/176 (14%)
Query 111 LQSLIDEANTLSQRLQVEIQK---SQARVQQLLGLREQMATYIVAAKEFLNEYPEF---- 163
L +L+ E N L ++Q E + ++ R QL+ + Q+ I E + E
Sbjct 878 LVTLVQEKNDLQLQVQAESENLLDAEERCDQLIKAKFQLEAKIKEVTERAEDEEEINAEL 937
Query 164 VNHRHPLDNFQERLSKKINTLHTL--QVSNDIAITQMQ---LAQQLS-----FTLLDRFK 213
+ L++ L K I+ L +V + T+ + L ++L+ L R K
Sbjct 938 TAKKRKLEDECSELKKDIDDLELTLAKVEKEKHATENKVKNLTEELAGLDETIAKLTREK 997
Query 214 EAQQVLIPAWQYHLK-QSMQTASVSELQ-KLDRSRDNLLNTLKQ------SLDQNK 261
+A Q L+ + + S+S+L+ KL++ D+L ++L+Q L++NK
Sbjct 998 KALQEAHQQTLDDLQAEEDKVNSLSKLKSKLEQQVDDLESSLEQEKKLRVDLERNK 1053
>P13541 Myosin-3 [Mus musculus]
Length=1940
Score = 38.5 bits (88), Expect = 4e-06
Identities = 33/110 (30%), Positives = 58/110 (53%), Gaps = 17/110 (15%)
Query 46 IQAQSVLLNSIDAELNYQLSHVIGLLIEKLSQS-----DRQLKKRKFN---RLQKWLGID 97
+QA+ +NS+ ++L +L + L L Q D + KRK +L + +D
Sbjct 1011 LQAEEDKVNSL-SKLKSKLEQQVDDLESSLEQEKKLRVDLERNKRKLEGDLKLAQESILD 1069
Query 98 LEYDQNQLHY--------FNALQSLIDEANTLSQRLQVEIQKSQARVQQL 139
LE D+ QL ++ LQS +++ TLS +LQ +I++ QAR+++L
Sbjct 1070 LENDKQQLDERLKKKDFEYSQLQSKVEDEQTLSLQLQKKIKELQARIEEL 1119
Score = 21.2 bits (43), Expect = 1.0
Identities = 42/186 (23%), Positives = 79/186 (42%), Gaps = 27/186 (15%)
Query 74 KLSQSDRQLKKRKFNRLQKWLGIDLEYDQNQLHYFNALQSLIDEANTLSQRLQVEIQKS- 132
+LS ++RQ + ++ + + QLH +AL+ D L ++L + +++
Sbjct 1629 QLSHANRQAAET----IKHLRSVQGQLKDTQLHLDDALRGQED----LKEQLAIVERRAN 1680
Query 133 --QARVQQLLGLREQMATYIVAAKEFLNEYPEFVNHRHPLDNFQERLSKKINT-LHTLQV 189
QA V++L EQ A++ L + E V H + KK+ T L LQ
Sbjct 1681 LLQAEVEELRATLEQTERARKLAEQELLDSNERVQLLHTQNTSLIHTKKKLETDLTQLQS 1740
Query 190 SNDIAITQMQLAQQLSF-TLLDRFKEAQQVLIPAWQYHLKQSMQTASVSELQKLDRSRDN 248
+ A + A++ + + D A++ LK+ T++ L+R + N
Sbjct 1741 EVEDACRDARNAEEKAKKAITDAAMMAEE---------LKKEQDTSA-----HLERMKKN 1786
Query 249 LLNTLK 254
L T+K
Sbjct 1787 LEQTVK 1792
Score = 20.0 bits (40), Expect = 2.4
Identities = 41/176 (23%), Positives = 78/176 (44%), Gaps = 25/176 (14%)
Query 111 LQSLIDEANTLSQRLQVEIQK---SQARVQQLLGLREQMATYIVAAKEFLNEYPEF---- 163
L +L+ E N L ++Q E + ++ R QL+ + Q+ I E + E
Sbjct 878 LVTLVQEKNDLQLQVQAESENLLDAEERCDQLIKAKFQLEAKIKEVTERAEDEEEINAEL 937
Query 164 VNHRHPLDNFQERLSKKINTLHTL--QVSNDIAITQMQ---LAQQLS-----FTLLDRFK 213
+ L++ L K I+ L +V + T+ + L ++L+ L R K
Sbjct 938 TAKKRKLEDECSELKKDIDDLELTLAKVEKEKHATENKVKNLTEELAGLDETIAKLTREK 997
Query 214 EAQQVLIPAWQYHLK-QSMQTASVSELQ-KLDRSRDNLLNTLKQ------SLDQNK 261
+A Q L+ + + S+S+L+ KL++ D+L ++L+Q L++NK
Sbjct 998 KALQEAHQQTLDDLQAEEDKVNSLSKLKSKLEQQVDDLESSLEQEKKLRVDLERNK 1053
>B2RZ86 Coiled-coil domain-containing protein 89 [Rattus norvegicus]
Length=370
Score = 37.4 bits (85), Expect = 6e-06
Identities = 42/173 (24%), Positives = 77/173 (45%), Gaps = 10/173 (6%)
Query 74 KLSQSDRQLKKRKFNRLQKWLGIDLEYDQNQLHYFNALQSLIDEANTLSQRLQVEIQKSQ 133
KL + + +L++ + + L D E QL N ++L++E L QR E +++
Sbjct 145 KLKEENEKLRQENNSLFSQALK-DQENKVLQLTAHN--KALVEELEVLKQRCAHEAGQAR 201
Query 134 ARVQQLLGLREQMATYIVAAKEFLNEYPEFVN--HRHPLDNFQERLSKKINTLHTLQVSN 191
AR ++LL L+ Q A E L + + HR + + IN LQ
Sbjct 202 AREEELLALQNQQACEHAKETEQLRSQLQSIKQQHRQATEQMGKDQEANINMNQELQARL 261
Query 192 DIAITQMQLAQQLSFTLLDRFKEAQQVLIPAWQYHLKQSMQTASVSELQKLDR 244
+ + + QLS ++R K Q Q L++ ++TA++++ L+R
Sbjct 262 HTVMREKEELLQLS---MERGKVLQNKQAEIRQ--LEEKLETAAMAKKHALER 309
Score = 20.0 bits (40), Expect = 2.1
Identities = 27/150 (18%), Positives = 63/150 (42%), Gaps = 13/150 (9%)
Query 43 DQLIQAQSVLLNSIDAELNYQ--------LSHVIGLLIEKLSQSDRQLKKRKFNRLQKWL 94
D+++ Q+ L + D EL ++ L+++ GL E+ + ++ + + + + +
Sbjct 16 DEILGRQNENLENEDDELGFKEMDGLREALANLRGLSEEE--KGEKAMLRSRIQEQSQLI 73
Query 95 GIDLEYDQNQLHYFNALQSLIDEANTLSQRLQVEIQKSQARVQQLLGLREQMATYIVAAK 154
I L L+ L E L ++ E++K + + +Q+ L + T +
Sbjct 74 CILKRRSDEALERCQILELLNSE---LEEKRMQEMEKMKVQNEQVQKLESRFMTLAANHE 130
Query 155 EFLNEYPEFVNHRHPLDNFQERLSKKINTL 184
+ E + L E+L ++ N+L
Sbjct 131 LMIRFKDEHKSENIKLKEENEKLRQENNSL 160
>Q7FAD5 Synaptonemal complex protein ZEP1 [Oryza sativa subsp.
japonica]
Length=869
Score = 35.0 bits (79), Expect = 4e-05
Identities = 40/191 (21%), Positives = 77/191 (40%), Gaps = 36/191 (19%)
Query 72 IEKLSQSDRQLKKRKFNRLQKWLGIDLEYDQNQLHYFNALQSLIDEANTLSQRLQVEIQK 131
++KL + R + K LQK L LE D +L +QS+++E + ++ LQ EI K
Sbjct 425 VQKLLEDSRSAENHKQELLQKIL--KLESDNQEL--LGRVQSVLNEKSNDTESLQGEIAK 480
Query 132 SQARVQQLLGLREQMATYIVAAKEFLNEYPEFVNHRHPLDNFQERLSKKINTLHTLQVSN 191
+V+ L + +N+ ++ + L K + LQV
Sbjct 481 RDQQVETL--------------ENQVNQLCSIIDEKEQLHTCAVEREKNLEE-QKLQVQA 525
Query 192 DIAITQMQLAQQLSFTLLDRFKEAQQVLIPAWQYHLKQSMQTASVSELQKLDRSRDNLLN 251
+A T+ QL + K+ +++ + L + L++L D +N
Sbjct 526 SLAATESQLTEA---------KKQYDIMLEGKKIELSK--------HLKELSLKNDQAIN 568
Query 252 TLKQSLDQNKV 262
+++ + KV
Sbjct 569 EIRRKYELEKV 579
Score = 24.6 bits (52), Expect = 0.081
Identities = 26/113 (23%), Positives = 53/113 (47%), Gaps = 15/113 (13%)
Query 99 EYDQNQLHYFNALQSLIDEANTLSQRLQVEIQKSQAR----------VQQLLGLREQMAT 148
E DQ+ A + I E N+L ++L+ I++++AR ++Q L L+E +
Sbjct 194 EMDQSYKEQLYASDTTIREKNSLIKQLEDSIEQNKARLLYVDSRLECMEQELKLKEDVCI 253
Query 149 YI---VAAKEFLNEYPEFVNHRHPLDNFQERLSKKINTLHTLQVSNDIAITQM 198
+ +A+ E + N + L+ ++LSK L+ L + +T++
Sbjct 254 CLKENLASTESEKNDLKLRNEGYTLE--VQKLSKDNKELNELLSGFTVKVTEL 304
Score = 24.6 bits (52), Expect = 0.081
Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 10/99 (10%)
Query 39 NHFADQLIQAQSVLLNSIDAELNYQLSHVIGLLIEKLSQSDRQLKKRKFNRLQKWLGIDL 98
N ++L+ +V + +D E SHV L I + D ++ + K + K
Sbjct 287 NKELNELLSGFTVKVTELDKEHTSISSHVTQL-ISSFERYDGKVHEEKMLMI-KSAKDKF 344
Query 99 EYDQNQ----LHYFNALQSLIDEANTLSQRLQVEIQKSQ 133
E+ QNQ + NALQ+ I+E L R+ +E+QK+Q
Sbjct 345 EHLQNQYVNLISENNALQTEIEE---LKSRI-IELQKTQ 379
Score = 21.9 bits (45), Expect = 0.57
Identities = 16/68 (24%), Positives = 32/68 (47%), Gaps = 11/68 (16%)
Query 41 FADQLIQAQSVLLNSIDAELNYQLSHV--------IGLLIEKLSQS---DRQLKKRKFNR 89
FA+ I A+ ++ + + +++H I LL KL Q+ + +LK ++
Sbjct 45 FANLKITAEKLVKEQASVKTDLEMTHTKLRRATEQINLLEAKLQQAVNENAKLKVKQTED 104
Query 90 LQKWLGID 97
+ W G+D
Sbjct 105 SKLWQGLD 112
>Q974N4 Leucine--tRNA ligase 1 [Sulfurisphaera tokodaii (strain
DSM 16993 / JCM 10545 / NBRC 100140 / 7)]
Length=945
Score = 35.0 bits (79), Expect = 4e-05
Identities = 30/116 (26%), Positives = 55/116 (47%), Gaps = 6/116 (5%)
Query 97 DLEYDQNQLHYFNALQSLIDEANTLSQRLQVEIQKSQARVQQLLGLREQMATYIVAAKEF 156
++EY++ L L+S+I++ N LS L E +K V LRE + I+A K+
Sbjct 794 EVEYNEKSLLKVEYLRSIIEDVNRLSSELGKEAEKVVIYVNDDNNLRELLKKAIIAIKD- 852
Query 157 LNEYPEFVNHRHPLDNFQERLSKKIN----TLHTLQVSNDIAITQMQLAQQLSFTL 208
+F+ + D R+ + N T+ L V+ DI ++ + Q ++F +
Sbjct 853 RKSLRDFMIENNVDDKTARRIYELANVLPSTIRDLIVTTDIDEEEV-IVQNINFLM 907
>Q6RI86 Transient receptor potential cation channel subfamily
A member 1 [Rattus norvegicus]
Length=1125
Score = 35.0 bits (79), Expect = 4e-05
Identities = 24/78 (31%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Query 106 HYFNALQSLIDEANTLSQRLQVEIQKSQARVQQLLGLRE---QMATYIVAAKEFLNEYPE 162
HYF ++Q EA + L++EI K + R++ L L E ++ I+ E ++E +
Sbjct 1023 HYFLSMQETRQEAPNIDTCLEMEILKQKYRLKDLTSLLEKQHELIKLIIQKMEIISETED 1082
Query 163 FVNHRHPLDNF-QERLSK 179
NH D F +ERL +
Sbjct 1083 EDNHCSFQDRFKKERLEQ 1100
Lambda K H a alpha
0.321 0.134 0.367 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 2411586
Database: 6ba9e257679a66867746fe7437089e85.SwissProt.fasta
Posted date: May 19, 2024 10:10 PM
Number of letters in database: 11,934
Number of sequences in database: 12
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
Loading
Data ...
