BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: c272e60ac2d3f25adc9079d1db5313c3.SwissProt.fasta
12 sequences; 3,477 total letters
Query= ACIAD2265
Length=205
Score E
Sequences producing significant alignments: (Bits) Value
Q9K1A0 Endolytic peptidoglycan transglycosylase RlpA [Neisseria m... 141 2e-45
Q9JSM7 Endolytic peptidoglycan transglycosylase RlpA [Neisseria m... 141 2e-45
A0A0H2ZFV1 Endolytic peptidoglycan transglycosylase RlpA [Pseudom... 135 3e-42
Q9X6V6 Endolytic peptidoglycan transglycosylase RlpA [Pseudomonas... 135 3e-42
Q9KTF4 Endolytic peptidoglycan transglycosylase RlpA [Vibrio chol... 130 4e-41
Q55752 Probable endolytic peptidoglycan transglycosylase RlpA [Sy... 121 5e-37
Q4ULW1 Endolytic peptidoglycan transglycosylase RlpA [Rickettsia ... 116 7e-36
Q1RJR1 Endolytic peptidoglycan transglycosylase RlpA [Rickettsia ... 115 1e-35
Q9PHM1 Endolytic peptidoglycan transglycosylase RlpA [Campylobact... 113 2e-34
Q68WY7 Endolytic peptidoglycan transglycosylase RlpA [Rickettsia ... 114 3e-34
Q92I83 Endolytic peptidoglycan transglycosylase RlpA [Rickettsia ... 112 1e-33
P10100 Endolytic peptidoglycan transglycosylase RlpA [Escherichia... 87.8 4e-24
>Q9K1A0 Endolytic peptidoglycan transglycosylase RlpA [Neisseria
meningitidis serogroup B (strain MC58)]
Length=239
Score = 141 bits (355), Expect = 2e-45
Identities = 62/100 (62%), Positives = 81/100 (81%), Gaps = 0/100 (0%)
Query 100 NTVRKFSQTGIASWYGRQFHGRKTANGETFDMNELTAAHRSLPLNCYIRVTNKDNGKSVV 159
N V +F+QTG ASWYG +FHGRKT+ GE +DMN TAAH++LP+ Y+RVTN NGKSV+
Sbjct 53 NQVAEFTQTGNASWYGGRFHGRKTSGGERYDMNAFTAAHKTLPIPSYVRVTNTKNGKSVI 112
Query 160 VKVNDRGPFHGNRVLDLSYAAAKRIGMTNAGTGKVSIERV 199
V+VNDRGPFHGNR++D+S AAA+++G N GT V IE++
Sbjct 113 VRVNDRGPFHGNRIIDVSKAAAQKLGFVNQGTAHVKIEQI 152
>Q9JSM7 Endolytic peptidoglycan transglycosylase RlpA [Neisseria
meningitidis serogroup A / serotype 4A (strain DSM 15465
/ Z2491)]
Length=239
Score = 141 bits (355), Expect = 2e-45
Identities = 62/100 (62%), Positives = 81/100 (81%), Gaps = 0/100 (0%)
Query 100 NTVRKFSQTGIASWYGRQFHGRKTANGETFDMNELTAAHRSLPLNCYIRVTNKDNGKSVV 159
N V +F+QTG ASWYG +FHGRKT+ GE +DMN TAAH++LP+ Y+RVTN NGKSV+
Sbjct 53 NQVAEFTQTGNASWYGGRFHGRKTSGGERYDMNAFTAAHKTLPIPSYVRVTNTKNGKSVI 112
Query 160 VKVNDRGPFHGNRVLDLSYAAAKRIGMTNAGTGKVSIERV 199
V+VNDRGPFHGNR++D+S AAA+++G N GT V IE++
Sbjct 113 VRVNDRGPFHGNRIIDVSKAAAQKLGFVNQGTAHVKIEQI 152
>A0A0H2ZFV1 Endolytic peptidoglycan transglycosylase RlpA [Pseudomonas
aeruginosa (strain UCBPP-PA14)]
Length=341
Score = 135 bits (341), Expect = 3e-42
Identities = 59/101 (58%), Positives = 79/101 (78%), Gaps = 0/101 (0%)
Query 100 NTVRKFSQTGIASWYGRQFHGRKTANGETFDMNELTAAHRSLPLNCYIRVTNKDNGKSVV 159
N R + G ASWYG +FHG+ TANGET+D+ +TAAH++LPL Y+RVTN DNGKSV+
Sbjct 93 NDARAYRMVGTASWYGTKFHGQATANGETYDLYGMTAAHKTLPLPSYVRVTNLDNGKSVI 152
Query 160 VKVNDRGPFHGNRVLDLSYAAAKRIGMTNAGTGKVSIERVD 200
V+VNDRGPF+ +RV+DLS+AAAK++G GT +V +E +D
Sbjct 153 VRVNDRGPFYSDRVIDLSFAAAKKLGYAETGTARVKVEGID 193
>Q9X6V6 Endolytic peptidoglycan transglycosylase RlpA [Pseudomonas
aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116
/ JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)]
Length=342
Score = 135 bits (341), Expect = 3e-42
Identities = 59/101 (58%), Positives = 79/101 (78%), Gaps = 0/101 (0%)
Query 100 NTVRKFSQTGIASWYGRQFHGRKTANGETFDMNELTAAHRSLPLNCYIRVTNKDNGKSVV 159
N R + G ASWYG +FHG+ TANGET+D+ +TAAH++LPL Y+RVTN DNGKSV+
Sbjct 93 NDARAYRMVGTASWYGTKFHGQATANGETYDLYGMTAAHKTLPLPSYVRVTNLDNGKSVI 152
Query 160 VKVNDRGPFHGNRVLDLSYAAAKRIGMTNAGTGKVSIERVD 200
V+VNDRGPF+ +RV+DLS+AAAK++G GT +V +E +D
Sbjct 153 VRVNDRGPFYSDRVIDLSFAAAKKLGYAETGTARVKVEGID 193
>Q9KTF4 Endolytic peptidoglycan transglycosylase RlpA [Vibrio
cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)]
Length=263
Score = 130 bits (328), Expect = 4e-41
Identities = 60/100 (60%), Positives = 78/100 (78%), Gaps = 2/100 (2%)
Query 105 FSQTGIASWYGRQFHGRKTANGETFDMNELTAAHRSLPLNCYIRVTNKDNGKSVVVKVND 164
F+++G ASWYG++FHG T+NGE +DM +TAAH++LP+ Y++VTN DNGKS VV+VND
Sbjct 75 FTESGKASWYGKKFHGHLTSNGEIYDMYSMTAAHKTLPIPSYVKVTNTDNGKSTVVRVND 134
Query 165 RGPFHGNRVLDLSYAAAKRIGMTNAGTGKVSIE--RVDGP 202
RGPFH R++DLSYAAA +IG+ AGT V IE VD P
Sbjct 135 RGPFHDGRIIDLSYAAAYKIGVVQAGTANVRIEVITVDKP 174
>Q55752 Probable endolytic peptidoglycan transglycosylase RlpA
[Synechocystis sp. (strain PCC 6803 / Kazusa)]
Length=321
Score = 121 bits (304), Expect = 5e-37
Identities = 58/109 (53%), Positives = 79/109 (72%), Gaps = 0/109 (0%)
Query 91 IEKLNTVASNTVRKFSQTGIASWYGRQFHGRKTANGETFDMNELTAAHRSLPLNCYIRVT 150
+ ++NT + K + GIASWYG FHGR+TANGE F+ N LTAAHR+LP ++VT
Sbjct 212 VARVNTFDAAATIKRIKGGIASWYGPGFHGRRTANGERFNQNALTAAHRTLPFGTRVKVT 271
Query 151 NKDNGKSVVVKVNDRGPFHGNRVLDLSYAAAKRIGMTNAGTGKVSIERV 199
N NG+SVVV++NDRGPF G RV+DLS AA+ IG+ ++G G V+++ V
Sbjct 272 NLRNGQSVVVRINDRGPFTGGRVIDLSAGAARAIGIHSSGVGNVALDIV 320
>Q4ULW1 Endolytic peptidoglycan transglycosylase RlpA [Rickettsia
felis (strain ATCC VR-1525 / URRWXCal2)]
Length=228
Score = 116 bits (290), Expect = 7e-36
Identities = 56/108 (52%), Positives = 76/108 (70%), Gaps = 3/108 (3%)
Query 93 KLNTVASNTVRKFSQTGIASWYGRQ---FHGRKTANGETFDMNELTAAHRSLPLNCYIRV 149
K T ++ + F++TG ASWYG + FHG+KTANG+ F+ N LTAAH++LPL C ++V
Sbjct 61 KGKTYKPHSTKSFTETGYASWYGGRKDGFHGKKTANGDRFNRNLLTAAHKTLPLPCLVKV 120
Query 150 TNKDNGKSVVVKVNDRGPFHGNRVLDLSYAAAKRIGMTNAGTGKVSIE 197
TNK N KSV++ VNDRGPF NR++D+S AA+ + N G KV IE
Sbjct 121 TNKANNKSVILMVNDRGPFKKNRIIDVSQKAAEILAFKNQGITKVKIE 168
>Q1RJR1 Endolytic peptidoglycan transglycosylase RlpA [Rickettsia
bellii (strain RML369-C)]
Length=227
Score = 115 bits (288), Expect = 1e-35
Identities = 56/108 (52%), Positives = 74/108 (69%), Gaps = 3/108 (3%)
Query 93 KLNTVASNTVRKFSQTGIASWYGR---QFHGRKTANGETFDMNELTAAHRSLPLNCYIRV 149
K T N + F++TG ASWYG +FHG+KTANG+ F+ N LTAAH++LPL C ++V
Sbjct 62 KGKTYKPNAPKSFTETGYASWYGGGGDKFHGKKTANGDMFNKNLLTAAHKTLPLPCLVKV 121
Query 150 TNKDNGKSVVVKVNDRGPFHGNRVLDLSYAAAKRIGMTNAGTGKVSIE 197
TNK N KSV++ VNDRGPF NR++D+S AA+ + G KV IE
Sbjct 122 TNKTNNKSVILMVNDRGPFKPNRIIDVSAKAAEVLAFKKQGLAKVKIE 169
>Q9PHM1 Endolytic peptidoglycan transglycosylase RlpA [Campylobacter
jejuni subsp. jejuni serotype O:2 (strain ATCC 700819
/ NCTC 11168)]
Length=275
Score = 113 bits (283), Expect = 2e-34
Identities = 51/89 (57%), Positives = 68/89 (76%), Gaps = 0/89 (0%)
Query 109 GIASWYGRQFHGRKTANGETFDMNELTAAHRSLPLNCYIRVTNKDNGKSVVVKVNDRGPF 168
GIASWYG FHG+KT+NGET++ N LTAAH++LP+N ++VTN +N + V V+VNDRGPF
Sbjct 80 GIASWYGPGFHGKKTSNGETYNQNALTAAHKTLPMNTILKVTNLNNNRQVTVRVNDRGPF 139
Query 169 HGNRVLDLSYAAAKRIGMTNAGTGKVSIE 197
NR++DLS AA +I M +GT V +E
Sbjct 140 VNNRIIDLSKGAASQIDMIASGTAPVRLE 168
>Q68WY7 Endolytic peptidoglycan transglycosylase RlpA [Rickettsia
typhi (strain ATCC VR-144 / Wilmington)]
Length=320
Score = 114 bits (285), Expect = 3e-34
Identities = 55/100 (55%), Positives = 73/100 (73%), Gaps = 3/100 (3%)
Query 101 TVRKFSQTGIASWYGRQ---FHGRKTANGETFDMNELTAAHRSLPLNCYIRVTNKDNGKS 157
T + F++TG ASWYG + FHG+KTANG+ F+ N LTAAH++LPL C ++VTNK N KS
Sbjct 161 TPKYFTETGYASWYGGRKDGFHGKKTANGDRFNRNLLTAAHKTLPLPCLVKVTNKANNKS 220
Query 158 VVVKVNDRGPFHGNRVLDLSYAAAKRIGMTNAGTGKVSIE 197
V++ VNDRGPF NR++D+S AA+ + N G KV IE
Sbjct 221 VILMVNDRGPFKKNRIIDVSQKAAEILAFKNQGITKVRIE 260
Score = 16.9 bits (32), Expect = 4.3
Identities = 13/69 (19%), Positives = 26/69 (38%), Gaps = 19/69 (28%)
Query 83 IPEEEPSVIEKLNTVASNTVRKFSQTGIASWYGRQFHGRKTANGETFDMNELTAAHRSLP 142
+P E ++K+N ++K A+ Y + T N +
Sbjct 262 LPNETEKFLKKIN------LKKTENKIFANNYKESLFTKVTKNNQ-------------CS 302
Query 143 LNCYIRVTN 151
+NC+I++ N
Sbjct 303 INCHIKLVN 311
>Q92I83 Endolytic peptidoglycan transglycosylase RlpA [Rickettsia
conorii (strain ATCC VR-613 / Malish 7)]
Length=320
Score = 112 bits (281), Expect = 1e-33
Identities = 55/108 (51%), Positives = 74/108 (69%), Gaps = 3/108 (3%)
Query 93 KLNTVASNTVRKFSQTGIASWYGRQ---FHGRKTANGETFDMNELTAAHRSLPLNCYIRV 149
K T + + F++TG ASWYG FHG+KTANG+ F+ N LTAAH++LPL C ++V
Sbjct 153 KGKTYKPHNPKSFTETGYASWYGGLKDGFHGKKTANGDRFNRNLLTAAHKTLPLPCLVKV 212
Query 150 TNKDNGKSVVVKVNDRGPFHGNRVLDLSYAAAKRIGMTNAGTGKVSIE 197
TNK N K+V++ VNDRGPF NR++D+S AA+ + N G KV IE
Sbjct 213 TNKANNKAVILMVNDRGPFKKNRIIDVSQRAAEILAFKNQGITKVKIE 260
Score = 19.2 bits (38), Expect = 0.78
Identities = 17/66 (26%), Positives = 30/66 (45%), Gaps = 3/66 (5%)
Query 37 SSLAARVLNKDAQNN--FNSHFSNL-NSLSITESSGDKIRRQTIAAKIEIPEEEPSVIEK 93
S+ A ++ +DA + + S + N +S + KIR K ++P + S + K
Sbjct 30 STAAYTLVREDASTGLTYTADISKVGNQISGEPAQRIKIREHRRIPKFDLPNLKVSKVYK 89
Query 94 LNTVAS 99
L AS
Sbjct 90 LPLEAS 95
>P10100 Endolytic peptidoglycan transglycosylase RlpA [Escherichia
coli (strain K12)]
Length=362
Score = 87.8 bits (216), Expect = 4e-24
Identities = 41/85 (48%), Positives = 59/85 (69%), Gaps = 0/85 (0%)
Query 104 KFSQTGIASWYGRQFHGRKTANGETFDMNELTAAHRSLPLNCYIRVTNKDNGKSVVVKVN 163
+FSQ G+A+ Y + TA+GE FD +LTAAH +LP+ Y R+TN NG+ +VV++N
Sbjct 76 RFSQAGLAAIYDAEPGSNLTASGEAFDPTQLTAAHPTLPIPSYARITNLANGRMIVVRIN 135
Query 164 DRGPFHGNRVLDLSYAAAKRIGMTN 188
DRGP+ +RV+ LS AAA R+ +N
Sbjct 136 DRGPYGNDRVISLSRAAADRLNTSN 160
Lambda K H a alpha
0.315 0.129 0.358 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 494505
Database: c272e60ac2d3f25adc9079d1db5313c3.SwissProt.fasta
Posted date: May 20, 2024 5:12 AM
Number of letters in database: 3,477
Number of sequences in database: 12
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
