BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: df22e8958753ccd3fb3f27844b5ce47b.SwissProt.fasta
8 sequences; 3,743 total letters
Query= ACIAD2290
Length=530
Score E
Sequences producing significant alignments: (Bits) Value
Q09049 Cytochrome bd ubiquinol oxidase subunit 1 [Azotobacter vin... 843 0.0
P0ABK1 Cytochrome bd-I ubiquinol oxidase subunit 1 [Shigella flex... 761 0.0
P0ABK0 Cytochrome bd-I ubiquinol oxidase subunit 1 [Escherichia c... 761 0.0
P0ABJ9 Cytochrome bd-I ubiquinol oxidase subunit 1 [Escherichia c... 761 0.0
P45021 Probable cytochrome oxidase subunit 1 [Haemophilus influen... 647 0.0
P26459 Cytochrome bd-II ubiquinol oxidase subunit 1 [Escherichia ... 600 0.0
P94364 Cytochrome bd ubiquinol oxidase subunit 1 [Bacillus subtil... 333 7e-113
P81314 Uncharacterized protein MJ0796.1 [Methanocaldococcus janna... 40.0 2e-07
>Q09049 Cytochrome bd ubiquinol oxidase subunit 1 [Azotobacter
vinelandii]
Length=537
Score = 843 bits (2179), Expect = 0.0
Identities = 402/519 (77%), Positives = 467/519 (90%), Gaps = 0/519 (0%)
Query 2 MISESVVDLSRFQFAMTAMYHFLFVPLTLGLAFILAIMETTYVISGKEIYKDMTKFWGKL 61
MISESVVDLSR QFAMTA+YHFLFVPLTLG+ F+LAIME+ YV++GK++YKDM KFWGKL
Sbjct 1 MISESVVDLSRLQFAMTALYHFLFVPLTLGMTFLLAIMESVYVMTGKQVYKDMVKFWGKL 60
Query 62 FGINFALGVTTGLTMEFQFGTNWAYYSHYVGDIFGAPLAIEGLMAFFLESTFIGLFFFGW 121
FGINFALGVTTG+TMEFQFGTNWAYYSHYVGDIFGAPLAIEGL AFFLESTFIG+FFFGW
Sbjct 61 FGINFALGVTTGITMEFQFGTNWAYYSHYVGDIFGAPLAIEGLTAFFLESTFIGMFFFGW 120
Query 122 DRLSKVQHLGVTWLVAIGSNMSALWILVANGWMQNPVGAAFNYQTMRMELADFGALIFNP 181
DRLSK+QHL VTWLVA+GSN+SALWILVANGWMQ+PVGA FN++TMRMEL DFGAL+ NP
Sbjct 121 DRLSKIQHLAVTWLVALGSNLSALWILVANGWMQHPVGAEFNFETMRMELVDFGALLLNP 180
Query 182 VAQVKFVHTVSAGYVTGAIFVLAISSFYLLKKRDLPFARRSFAIAAIFGMASVLSVILLG 241
VAQVKFVHTV++GYVTGA+FVLAISS+YLLKKRDL FARRSFAIA+ FGMAS+LSVI+LG
Sbjct 181 VAQVKFVHTVASGYVTGAVFVLAISSYYLLKKRDLGFARRSFAIASAFGMASILSVIVLG 240
Query 242 DESGYELGDVQKAKLAAIESEWETEPAPASFTLFGVPNQQEMRTDYAIKIPYALGLIATR 301
DESGYE+G+VQKAKLAAIE+EWET PAPASFTL G PN++E RTD+A+KIP+ LG+IATR
Sbjct 241 DESGYEVGEVQKAKLAAIEAEWETHPAPASFTLIGFPNEEEQRTDFAVKIPWVLGIIATR 300
Query 302 STTGQVTGIKDLMKQHEARIRNGMVAYSELEKLRAGDRSASLLASFEKNQKDLGYGLLLK 361
S QV GIKDL+ HEARIRNGMV Y LE+LRAG++S +A+F + + DLGYGLLLK
Sbjct 301 SLDEQVIGIKDLIADHEARIRNGMVRYGLLEELRAGNKSPEKIAAFNEVKDDLGYGLLLK 360
Query 362 KYSPNVVDATEAHIQSAVKDSIPNVKALFFSFRIMVAAGFLMLLLFILATWSVAKRNAED 421
KY+PNVVDA+E I+ A KD+IP+V ++F+SFR MV AGF ML+LF+ A W+ A++N E
Sbjct 361 KYTPNVVDASEEQIKQAAKDTIPSVASMFWSFRAMVGAGFAMLILFVCAFWASARKNEES 420
Query 422 KPWLLKFALFALPLPWIAAQTGWYVAEGGRQPWTIGEVLPTHLSTSSLSSGDVWGSIAAL 481
KPWLLKFAL++LPLPWIA QTGW+VAE GRQPWTIG VLPTHLS SSLS+GD+WGS+ AL
Sbjct 421 KPWLLKFALYSLPLPWIATQTGWFVAEHGRQPWTIGGVLPTHLSASSLSTGDLWGSLIAL 480
Query 482 AAFYTVLLVIEMYLMIKFARLGPSSLHTGKYHFEKQETH 520
AFYT+LLV+EMYLMI+FARLGPSSLHTG+YHFE+ E H
Sbjct 481 IAFYTLLLVVEMYLMIRFARLGPSSLHTGRYHFEQLEQH 519
>P0ABK1 Cytochrome bd-I ubiquinol oxidase subunit 1 [Shigella
flexneri]
Length=522
Score = 761 bits (1964), Expect = 0.0
Identities = 362/513 (71%), Positives = 433/513 (84%), Gaps = 0/513 (0%)
Query 7 VVDLSRFQFAMTAMYHFLFVPLTLGLAFILAIMETTYVISGKEIYKDMTKFWGKLFGINF 66
+V+LSR QFA+TAMYHFLFVPLTLG+AF+LAIMET YV+SGK+IYKDMTKFWGKLFGINF
Sbjct 4 IVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINF 63
Query 67 ALGVTTGLTMEFQFGTNWAYYSHYVGDIFGAPLAIEGLMAFFLESTFIGLFFFGWDRLSK 126
ALGV TGLTMEFQFGTNW+YYSHYVGDIFGAPLAIEGLMAFFLESTF+GLFFFGWDRL K
Sbjct 64 ALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGK 123
Query 127 VQHLGVTWLVAIGSNMSALWILVANGWMQNPVGAAFNYQTMRMELADFGALIFNPVAQVK 186
VQH+ VTWLVA+GSN+SALWILVANGWMQNP+ + FN++TMRME+ F L+ NPVAQVK
Sbjct 124 VQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVK 183
Query 187 FVHTVSAGYVTGAIFVLAISSFYLLKKRDLPFARRSFAIAAIFGMASVLSVILLGDESGY 246
FVHTV++GYVTGA+F+L IS++Y+LK RD FA+RSFAIAA FGMA+VLSVI+LGDESGY
Sbjct 184 FVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESGY 243
Query 247 ELGDVQKAKLAAIESEWETEPAPASFTLFGVPNQQEMRTDYAIKIPYALGLIATRSTTGQ 306
E+GDVQK KLAAIE+EWET+PAPA+FTLFG+P+Q+E +AI+IPYALG+IATRS
Sbjct 244 EMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVDTP 303
Query 307 VTGIKDLMKQHEARIRNGMVAYSELEKLRAGDRSASLLASFEKNQKDLGYGLLLKKYSPN 366
V G+K+LM QHE RIRNGM AYS LE+LR+G ++ F +KDLGYGLLLK+Y+PN
Sbjct 304 VIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYTPN 363
Query 367 VVDATEAHIQSAVKDSIPNVKALFFSFRIMVAAGFLMLLLFILATWSVAKRNAEDKPWLL 426
V DATEA IQ A KDSIP V L+F+FRIMVA GFL+L + L+ WSV + +K WLL
Sbjct 364 VADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKWLL 423
Query 427 KFALFALPLPWIAAQTGWYVAEGGRQPWTIGEVLPTHLSTSSLSSGDVWGSIAALAAFYT 486
+ AL+ +PLPWIA + GW+VAE GRQPW IGEVLPT ++ SSL++GD+ S+ + YT
Sbjct 424 RAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICGLYT 483
Query 487 VLLVIEMYLMIKFARLGPSSLHTGKYHFEKQET 519
+ LV E++LM KFARLGPSSL TG+YHFE+ T
Sbjct 484 LFLVAELFLMFKFARLGPSSLKTGRYHFEQSST 516
>P0ABK0 Cytochrome bd-I ubiquinol oxidase subunit 1 [Escherichia
coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)]
Length=522
Score = 761 bits (1964), Expect = 0.0
Identities = 362/513 (71%), Positives = 433/513 (84%), Gaps = 0/513 (0%)
Query 7 VVDLSRFQFAMTAMYHFLFVPLTLGLAFILAIMETTYVISGKEIYKDMTKFWGKLFGINF 66
+V+LSR QFA+TAMYHFLFVPLTLG+AF+LAIMET YV+SGK+IYKDMTKFWGKLFGINF
Sbjct 4 IVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINF 63
Query 67 ALGVTTGLTMEFQFGTNWAYYSHYVGDIFGAPLAIEGLMAFFLESTFIGLFFFGWDRLSK 126
ALGV TGLTMEFQFGTNW+YYSHYVGDIFGAPLAIEGLMAFFLESTF+GLFFFGWDRL K
Sbjct 64 ALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGK 123
Query 127 VQHLGVTWLVAIGSNMSALWILVANGWMQNPVGAAFNYQTMRMELADFGALIFNPVAQVK 186
VQH+ VTWLVA+GSN+SALWILVANGWMQNP+ + FN++TMRME+ F L+ NPVAQVK
Sbjct 124 VQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVK 183
Query 187 FVHTVSAGYVTGAIFVLAISSFYLLKKRDLPFARRSFAIAAIFGMASVLSVILLGDESGY 246
FVHTV++GYVTGA+F+L IS++Y+LK RD FA+RSFAIAA FGMA+VLSVI+LGDESGY
Sbjct 184 FVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESGY 243
Query 247 ELGDVQKAKLAAIESEWETEPAPASFTLFGVPNQQEMRTDYAIKIPYALGLIATRSTTGQ 306
E+GDVQK KLAAIE+EWET+PAPA+FTLFG+P+Q+E +AI+IPYALG+IATRS
Sbjct 244 EMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVDTP 303
Query 307 VTGIKDLMKQHEARIRNGMVAYSELEKLRAGDRSASLLASFEKNQKDLGYGLLLKKYSPN 366
V G+K+LM QHE RIRNGM AYS LE+LR+G ++ F +KDLGYGLLLK+Y+PN
Sbjct 304 VIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYTPN 363
Query 367 VVDATEAHIQSAVKDSIPNVKALFFSFRIMVAAGFLMLLLFILATWSVAKRNAEDKPWLL 426
V DATEA IQ A KDSIP V L+F+FRIMVA GFL+L + L+ WSV + +K WLL
Sbjct 364 VADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKWLL 423
Query 427 KFALFALPLPWIAAQTGWYVAEGGRQPWTIGEVLPTHLSTSSLSSGDVWGSIAALAAFYT 486
+ AL+ +PLPWIA + GW+VAE GRQPW IGEVLPT ++ SSL++GD+ S+ + YT
Sbjct 424 RAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICGLYT 483
Query 487 VLLVIEMYLMIKFARLGPSSLHTGKYHFEKQET 519
+ LV E++LM KFARLGPSSL TG+YHFE+ T
Sbjct 484 LFLVAELFLMFKFARLGPSSLKTGRYHFEQSST 516
>P0ABJ9 Cytochrome bd-I ubiquinol oxidase subunit 1 [Escherichia
coli (strain K12)]
Length=522
Score = 761 bits (1964), Expect = 0.0
Identities = 362/513 (71%), Positives = 433/513 (84%), Gaps = 0/513 (0%)
Query 7 VVDLSRFQFAMTAMYHFLFVPLTLGLAFILAIMETTYVISGKEIYKDMTKFWGKLFGINF 66
+V+LSR QFA+TAMYHFLFVPLTLG+AF+LAIMET YV+SGK+IYKDMTKFWGKLFGINF
Sbjct 4 IVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINF 63
Query 67 ALGVTTGLTMEFQFGTNWAYYSHYVGDIFGAPLAIEGLMAFFLESTFIGLFFFGWDRLSK 126
ALGV TGLTMEFQFGTNW+YYSHYVGDIFGAPLAIEGLMAFFLESTF+GLFFFGWDRL K
Sbjct 64 ALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGK 123
Query 127 VQHLGVTWLVAIGSNMSALWILVANGWMQNPVGAAFNYQTMRMELADFGALIFNPVAQVK 186
VQH+ VTWLVA+GSN+SALWILVANGWMQNP+ + FN++TMRME+ F L+ NPVAQVK
Sbjct 124 VQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVAQVK 183
Query 187 FVHTVSAGYVTGAIFVLAISSFYLLKKRDLPFARRSFAIAAIFGMASVLSVILLGDESGY 246
FVHTV++GYVTGA+F+L IS++Y+LK RD FA+RSFAIAA FGMA+VLSVI+LGDESGY
Sbjct 184 FVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESGY 243
Query 247 ELGDVQKAKLAAIESEWETEPAPASFTLFGVPNQQEMRTDYAIKIPYALGLIATRSTTGQ 306
E+GDVQK KLAAIE+EWET+PAPA+FTLFG+P+Q+E +AI+IPYALG+IATRS
Sbjct 244 EMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSVDTP 303
Query 307 VTGIKDLMKQHEARIRNGMVAYSELEKLRAGDRSASLLASFEKNQKDLGYGLLLKKYSPN 366
V G+K+LM QHE RIRNGM AYS LE+LR+G ++ F +KDLGYGLLLK+Y+PN
Sbjct 304 VIGLKELMVQHEERIRNGMKAYSLLEQLRSGSTDQAVRDQFNSMKKDLGYGLLLKRYTPN 363
Query 367 VVDATEAHIQSAVKDSIPNVKALFFSFRIMVAAGFLMLLLFILATWSVAKRNAEDKPWLL 426
V DATEA IQ A KDSIP V L+F+FRIMVA GFL+L + L+ WSV + +K WLL
Sbjct 364 VADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKWLL 423
Query 427 KFALFALPLPWIAAQTGWYVAEGGRQPWTIGEVLPTHLSTSSLSSGDVWGSIAALAAFYT 486
+ AL+ +PLPWIA + GW+VAE GRQPW IGEVLPT ++ SSL++GD+ S+ + YT
Sbjct 424 RAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICGLYT 483
Query 487 VLLVIEMYLMIKFARLGPSSLHTGKYHFEKQET 519
+ LV E++LM KFARLGPSSL TG+YHFE+ T
Sbjct 484 LFLVAELFLMFKFARLGPSSLKTGRYHFEQSST 516
>P45021 Probable cytochrome oxidase subunit 1 [Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd)]
Length=521
Score = 647 bits (1668), Expect = 0.0
Identities = 317/515 (62%), Positives = 397/515 (77%), Gaps = 5/515 (1%)
Query 7 VVDLSRFQFAMTAMYHFLFVPLTLGLAFILAIMETTYVISGKEIYKDMTKFWGKLFGINF 66
VVDLSR QFA+TA+YHF+FVPLTLGL+FIL IMET YV +GKE+YKDMTKFWGKLFGINF
Sbjct 4 VVDLSRLQFALTALYHFIFVPLTLGLSFILVIMETIYVATGKEVYKDMTKFWGKLFGINF 63
Query 67 ALGVTTGLTMEFQFGTNWAYYSHYVGDIFGAPLAIEGLMAFFLESTFIGLFFFGWDRLSK 126
ALGVTTG+ MEFQFGTNW+YYSHYVGDIFGAPLAIE L+AFFLESTF+GLFFFGWDRLSK
Sbjct 64 ALGVTTGIIMEFQFGTNWSYYSHYVGDIFGAPLAIEALLAFFLESTFVGLFFFGWDRLSK 123
Query 127 VQHLGVTWLVAIGSNMSALWILVANGWMQNPVGAAFNYQTMRMELADFGALIFNPVAQVK 186
+HL T+ VA GSN+SA+WILVANGWMQ P G+ FN++T+RME+ +F L NPVAQ K
Sbjct 124 GKHLLATYCVAFGSNLSAMWILVANGWMQAPTGSEFNFETVRMEMTNFLDLWLNPVAQSK 183
Query 187 FVHTVSAGYVTGAIFVLAISSFYLLKKRDLPFARRSFAIAAIFGMASVLSVILLGDESGY 246
F+HT+SAGYVTGA FVLAISS++LLK RD FA+RSF++AA FG + +SV++LGDESGY
Sbjct 184 FLHTLSAGYVTGAFFVLAISSYFLLKGRDFEFAKRSFSVAATFGFIASISVLILGDESGY 243
Query 247 ELGDVQKAKLAAIESEWETEPAPASFTLFGVPNQQEMRTDYAIKIPYALGLIATRSTTGQ 306
++G Q KLAA+E+E+ET PAPA F +PN EM+ D+AI+IPY G+IATRS +
Sbjct 244 DIGKAQPVKLAAMEAEFETHPAPAPFLPVAIPNTAEMKNDFAIEIPYLGGVIATRSIDKE 303
Query 307 VTGIKDLMKQHEARIRNGMVAYSELEKLRA-----GDRSASLLASFEKNQKDLGYGLLLK 361
+ G+KDL +E R+R+G+ AY +LRA G + A F + +KDLG+GLLLK
Sbjct 304 IIGLKDLQALNETRVRSGIRAYELFTQLRAEKKANGQVNEETKAQFNEVKKDLGFGLLLK 363
Query 362 KYSPNVVDATEAHIQSAVKDSIPNVKALFFSFRIMVAAGFLMLLLFILATWSVAKRNAED 421
+Y+ NVVDATE I+ A +D+IPNV F++FR M+AAG L+ LL A +
Sbjct 364 RYTNNVVDATEEQIKQAARDTIPNVGPNFWAFRAMIAAGGLIALLTFGAFVQNLRNKVTQ 423
Query 422 KPWLLKFALFALPLPWIAAQTGWYVAEGGRQPWTIGEVLPTHLSTSSLSSGDVWGSIAAL 481
P LLK L+ LPLPWIA + GW++AE GRQPW E+LP +S S+LS+GD+W SI +
Sbjct 424 IPLLLKVLLWGLPLPWIAIECGWFLAEYGRQPWATYEILPVGVSASNLSTGDLWFSIGLI 483
Query 482 AAFYTVLLVIEMYLMIKFARLGPSSLHTGKYHFEK 516
A Y +++EMYLM K+ARLGPS+L TGKY+FE+
Sbjct 484 CALYLAFIIVEMYLMFKYARLGPSALKTGKYYFEQ 518
>P26459 Cytochrome bd-II ubiquinol oxidase subunit 1 [Escherichia
coli (strain K12)]
Length=514
Score = 600 bits (1548), Expect = 0.0
Identities = 284/503 (56%), Positives = 382/503 (76%), Gaps = 0/503 (0%)
Query 7 VVDLSRFQFAMTAMYHFLFVPLTLGLAFILAIMETTYVISGKEIYKDMTKFWGKLFGINF 66
V+DLSR+QFA+TA+YHFLFVPLTLGL F+LAIMET YV++GK IY+DMT+FWGKLFGINF
Sbjct 4 VIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFGINF 63
Query 67 ALGVTTGLTMEFQFGTNWAYYSHYVGDIFGAPLAIEGLMAFFLESTFIGLFFFGWDRLSK 126
ALGV TGLTMEFQFGTNW++YS+YVGDIFGAPLA+E LMAFFLESTF+GLFFFGW RL+K
Sbjct 64 ALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQRLNK 123
Query 127 VQHLGVTWLVAIGSNMSALWILVANGWMQNPVGAAFNYQTMRMELADFGALIFNPVAQVK 186
QHL VTWLVA GSN+SALWIL ANGWMQ P GA F+ T+RME+ F L+FNPV+QVK
Sbjct 124 YQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVSQVK 183
Query 187 FVHTVSAGYVTGAIFVLAISSFYLLKKRDLPFARRSFAIAAIFGMASVLSVILLGDESGY 246
FVHTV AGYVTGA+F++AIS++YLL+ R+ A RSFAI ++FG +++ + LGD S Y
Sbjct 184 FVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDSSAY 243
Query 247 ELGDVQKAKLAAIESEWETEPAPASFTLFGVPNQQEMRTDYAIKIPYALGLIATRSTTGQ 306
E+ VQ KLAA+E EW+TEPAPA F + P Q + R +A+KIP LG++AT S
Sbjct 244 EVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSLDKP 303
Query 307 VTGIKDLMKQHEARIRNGMVAYSELEKLRAGDRSASLLASFEKNQKDLGYGLLLKKYSPN 366
V G+K+LM + R++ G +A+ ++++ G+R +L +F + DLGYG+LL +Y+P+
Sbjct 304 VPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRYAPD 363
Query 367 VVDATEAHIQSAVKDSIPNVKALFFSFRIMVAAGFLMLLLFILATWSVAKRNAEDKPWLL 426
+ T A Q+A++ +IP V +F+SFRIMV G L+LL+ ++A + + W+L
Sbjct 364 MNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALVQTLRGKIDQHRWVL 423
Query 427 KFALFALPLPWIAAQTGWYVAEGGRQPWTIGEVLPTHLSTSSLSSGDVWGSIAALAAFYT 486
K AL++LPLPWIA + GW++ E GRQPW I ++LPT+ + S+L++G + S+ + YT
Sbjct 424 KMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIVGLYT 483
Query 487 VLLVIEMYLMIKFARLGPSSLHT 509
+ L+ E+YLM K+ARLGPS++ +
Sbjct 484 LFLIAEVYLMQKYARLGPSAMQS 506
>P94364 Cytochrome bd ubiquinol oxidase subunit 1 [Bacillus subtilis
(strain 168)]
Length=468
Score = 333 bits (855), Expect = 7e-113
Identities = 188/495 (38%), Positives = 274/495 (55%), Gaps = 59/495 (12%)
Query 10 LSRFQFAMTAMYHFLFVPLTLGLAFILAIMETTYVISGKEIYKDMTKFWGKLFGINFALG 69
L+R QFA T ++HFLFVP+++GL F++A+MET Y++ E+Y M KFWG LF INFA+G
Sbjct 6 LARIQFASTTLFHFLFVPMSIGLVFMVALMETLYLVKKNELYLKMAKFWGHLFLINFAVG 65
Query 70 VTTGLTMEFQFGTNWAYYSHYVGDIFGAPLAIEGLMAFFLESTFIGLFFFGWDRLSKVQH 129
V TG+ EFQFG NW+ YS +VGD+FGAPLAIE L+AFF+ES FIGL+ FGWDRL K H
Sbjct 66 VVTGILQEFQFGLNWSDYSRFVGDVFGAPLAIEALLAFFMESIFIGLWIFGWDRLPKKIH 125
Query 130 LGVTWLVAIGSNMSALWILVANGWMQNPVGAAFNYQTMRMELADFGALIFNPVAQVKFVH 189
WLV+ G+ MS+ WIL AN +MQ PVG F + R E+ DFGALI NP V+F H
Sbjct 126 ALCIWLVSFGTIMSSFWILTANSFMQEPVG--FTIKNGRAEMNDFGALITNPQLWVEFPH 183
Query 190 TVSAGYVTGAIFVLAISSFYLLKKRDLPFARRSFAIAAIFGMASVLSVILLGDESGYELG 249
+ TGA F+ +S+F LLKK+++PF ++SF +A I G+ + L V L G L
Sbjct 184 VIFGALATGAFFIAGVSAFKLLKKKEVPFFKQSFKLAMIVGLCAGLGVGLSGHMQAEHLM 243
Query 250 DVQKAKLAAIESEWETEPAPASFTLFGVPNQQEMRTDYAIKIPYALGLIATRSTTGQVTG 309
+ Q K+AA E WE PA++T F + + ++ IK+PYAL +A + +G V G
Sbjct 244 ESQPMKMAASEGLWEDSGDPAAWTAFATIDTKNEKSSNEIKVPYALSYLAYQKFSGSVKG 303
Query 310 IKDLMKQHEARIRNGMVAYSELEKLRAGDRSASLLASFEKNQKDLGYGLLLKKYSPNVVD 369
+K L ++E Y + GD + +F + +G G+++
Sbjct 304 MKTLQAEYEK-------IYGK------GDYIPPVKTTFWSFRIMVGAGVVM--------- 341
Query 370 ATEAHIQSAVKDSIPNVKALFFSFRIMVAAGFLMLLLFILATWSVAKRNAEDKPWLLKFA 429
I+ A G L W ++ E+ W L+
Sbjct 342 -------------------------ILAALGGL---------WLNRRKKLENSKWYLRIM 367
Query 430 LFALPLPWIAAQTGWYVAEGGRQPWTIGEVLPTHLSTS-SLSSGDVWGSIAALAAFYTVL 488
+ + P++A GW + E GRQPWT+ ++ T S S ++++G + SI A Y +L
Sbjct 368 IALISFPFLANSAGWIMTEIGRQPWTVMGLMTTAQSVSPNVTAGSLLFSIIAFGVMYMIL 427
Query 489 LVIEMYLMIKFARLG 503
+ ++L I+ + G
Sbjct 428 GALLVFLFIREIKKG 442
>P81314 Uncharacterized protein MJ0796.1 [Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045
/ NBRC 100440)]
Length=137
Score = 40.0 bits (92), Expect = 2e-07
Identities = 22/65 (34%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Query 14 QFAMTAMYHFLFVPLTLGLAFILAIMETTYVISGKEIYKDMTKFWGKLFGINFALGVTTG 73
++ + Y F+ + + F+L++ +TY S K+I KD KF+ FGI F LG+T
Sbjct 47 EYHIIEFYDFIHI-----IGFLLSLSISTY-FSSKDIIKDFAKFFTIFFGITFILGITLF 100
Query 74 LTMEF 78
L + F
Sbjct 101 LGLTF 105
Score = 17.7 bits (34), Expect = 6.3
Identities = 10/35 (29%), Positives = 16/35 (46%), Gaps = 0/35 (0%)
Query 487 VLLVIEMYLMIKFARLGPSSLHTGKYHFEKQETHH 521
V++ I +Y+ I G S GKY + +H
Sbjct 15 VVVAILLYIFIILVVDGSISSLIGKYITYPSDEYH 49
Lambda K H a alpha
0.325 0.138 0.419 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 1619038
Database: df22e8958753ccd3fb3f27844b5ce47b.SwissProt.fasta
Posted date: May 9, 2024 8:46 AM
Number of letters in database: 3,743
Number of sequences in database: 8
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
