Comparative Genomics

ACIAD2308 / TrEMBL Alignments

BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: d12c6a6ca60542bce811f50cfcb4ccc9.TrEMBL.fasta
           13 sequences; 1,746 total letters



Query= ACIAD2308

Length=129
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

Q6FA21 Uncharacterized protein [Acinetobacter baylyi (strain ATCC...  254     3e-93
N9BVY9 Uncharacterized protein [Acinetobacter soli NIPH 2899]         234     5e-85
A0A1P8EFX1 Uncharacterized protein [Acinetobacter soli]               233     1e-84
A0A0M1I360 Membrane protein [Acinetobacter sp. C15]                   233     1e-84
A0A3D2SK47 Uncharacterized protein [Acinetobacter ursingii]           206     6e-74
A0A7T9UGI9 Uncharacterized protein [Acinetobacter ursingii]           206     6e-74
A0A3A8ECK2 Resolvase [Acinetobacter guerrae]                          204     5e-73
N9BYN2 Uncharacterized protein [Acinetobacter ursingii ANC 3649]      204     5e-73
A0A427PVK8 Uncharacterized protein [Acinetobacter sp. FDAARGOS_515]   204     5e-73
A0A3A8F0Z3 Uncharacterized protein [Acinetobacter rongchengensis]     188     7e-67
N8WWU5 Uncharacterized protein [Acinetobacter guillouiae NIPH 991]    188     9e-67
A0A0Q7FQ43 Resolvase [Acinetobacter sp. Root1280]                     188     1e-66
A0A6A1RTW4 Uncharacterized protein [Acinetobacter guillouiae]         188     1e-66


>Q6FA21 Uncharacterized protein [Acinetobacter baylyi (strain 
ATCC 33305 / BD413 / ADP1)]
Length=128

 Score = 254 bits (650),  Expect = 3e-93
 Identities = 127/128 (99%), Positives = 128/128 (100%), Gaps = 0/128 (0%)

Query  1    VLDQLAAIWNGLLSSLDSVPEDSIAVTAYVGGTILVLWCWYSIAKRLPKLIGGVTWIVLF  60
            +LDQLAAIWNGLLSSLDSVPEDSIAVTAYVGGTILVLWCWYSIAKRLPKLIGGVTWIVLF
Sbjct  1    MLDQLAAIWNGLLSSLDSVPEDSIAVTAYVGGTILVLWCWYSIAKRLPKLIGGVTWIVLF  60

Query  61   AILATPTISEGVNAGVAPAIFGLIFGVLTKEQPLIWSNLSLILFVTGLGLLIGYLWSKYS  120
            AILATPTISEGVNAGVAPAIFGLIFGVLTKEQPLIWSNLSLILFVTGLGLLIGYLWSKYS
Sbjct  61   AILATPTISEGVNAGVAPAIFGLIFGVLTKEQPLIWSNLSLILFVTGLGLLIGYLWSKYS  120

Query  121  ESRDTTSI  128
            ESRDTTSI
Sbjct  121  ESRDTTSI  128


>N9BVY9 Uncharacterized protein [Acinetobacter soli NIPH 2899]
Length=129

 Score = 234 bits (596),  Expect = 5e-85
 Identities = 110/128 (86%), Positives = 124/128 (97%), Gaps = 0/128 (0%)

Query  1    VLDQLAAIWNGLLSSLDSVPEDSIAVTAYVGGTILVLWCWYSIAKRLPKLIGGVTWIVLF  60
            VL+QLA IW+GLLS LDSVPEDSIA+TAYVGGT++VLWCWYSIAKRLP+LIGGVTWIVLF
Sbjct  2    VLEQLAGIWSGLLSVLDSVPEDSIAITAYVGGTLIVLWCWYSIAKRLPRLIGGVTWIVLF  61

Query  61   AILATPTISEGVNAGVAPAIFGLIFGVLTKEQPLIWSNLSLILFVTGLGLLIGYLWSKYS  120
            A+LATPTISEGVNAG+APAIFG+IFGVLTKEQPLIW+NLSLILFVTGLGLLIGYLWS YS
Sbjct  62   AVLATPTISEGVNAGIAPAIFGVIFGVLTKEQPLIWANLSLILFVTGLGLLIGYLWSNYS  121

Query  121  ESRDTTSI  128
             ++DT+S+
Sbjct  122  ANKDTSSV  129


>A0A1P8EFX1 Uncharacterized protein [Acinetobacter soli]
Length=128

 Score = 233 bits (593),  Expect = 1e-84
 Identities = 109/128 (85%), Positives = 124/128 (97%), Gaps = 0/128 (0%)

Query  1    VLDQLAAIWNGLLSSLDSVPEDSIAVTAYVGGTILVLWCWYSIAKRLPKLIGGVTWIVLF  60
            +L+QLA IW+GLLS LDSVPEDSIA+TAYVGGT++VLWCWYSIAKRLP+LIGGVTWIVLF
Sbjct  1    MLEQLAGIWSGLLSVLDSVPEDSIAITAYVGGTLIVLWCWYSIAKRLPRLIGGVTWIVLF  60

Query  61   AILATPTISEGVNAGVAPAIFGLIFGVLTKEQPLIWSNLSLILFVTGLGLLIGYLWSKYS  120
            A+LATPTISEGVNAG+APAIFG+IFGVLTKEQPLIW+NLSLILFVTGLGLLIGYLWS YS
Sbjct  61   AVLATPTISEGVNAGIAPAIFGVIFGVLTKEQPLIWANLSLILFVTGLGLLIGYLWSNYS  120

Query  121  ESRDTTSI  128
             ++DT+S+
Sbjct  121  ANKDTSSV  128


>A0A0M1I360 Membrane protein [Acinetobacter sp. C15]
Length=128

 Score = 233 bits (593),  Expect = 1e-84
 Identities = 109/128 (85%), Positives = 124/128 (97%), Gaps = 0/128 (0%)

Query  1    VLDQLAAIWNGLLSSLDSVPEDSIAVTAYVGGTILVLWCWYSIAKRLPKLIGGVTWIVLF  60
            +L+QLA IW+GLLS LDSVPEDSIA+TAYVGGT++VLWCWYSIAKRLP+LIGGVTWIVLF
Sbjct  1    MLEQLAGIWSGLLSVLDSVPEDSIAITAYVGGTLIVLWCWYSIAKRLPRLIGGVTWIVLF  60

Query  61   AILATPTISEGVNAGVAPAIFGLIFGVLTKEQPLIWSNLSLILFVTGLGLLIGYLWSKYS  120
            A+LATPTISEGVNAG+APAIFG+IFGVLTKEQPLIW+NLSLILFVTGLGLLIGYLWS YS
Sbjct  61   AVLATPTISEGVNAGIAPAIFGVIFGVLTKEQPLIWANLSLILFVTGLGLLIGYLWSNYS  120

Query  121  ESRDTTSI  128
             ++DT+S+
Sbjct  121  ANKDTSSV  128


>A0A3D2SK47 Uncharacterized protein [Acinetobacter ursingii]
Length=133

 Score = 206 bits (524),  Expect = 6e-74
 Identities = 94/119 (79%), Positives = 111/119 (93%), Gaps = 0/119 (0%)

Query  1    VLDQLAAIWNGLLSSLDSVPEDSIAVTAYVGGTILVLWCWYSIAKRLPKLIGGVTWIVLF  60
            +LDQL+AIWNGLLSSLDSVPEDSIAVT YV GTI+VLWCWY +AKRLP L+GG++WIVLF
Sbjct  1    MLDQLSAIWNGLLSSLDSVPEDSIAVTVYVVGTIIVLWCWYGVAKRLPHLLGGISWIVLF  60

Query  61   AILATPTISEGVNAGVAPAIFGLIFGVLTKEQPLIWSNLSLILFVTGLGLLIGYLWSKY  119
            AILATPT+S+G NA +APAIFG++FGVLTKEQ L+W+N+SLIL VTG+GL+IGYLWSKY
Sbjct  61   AILATPTVSDGANAEIAPAIFGVLFGVLTKEQALVWANVSLILLVTGVGLIIGYLWSKY  119


>A0A7T9UGI9 Uncharacterized protein [Acinetobacter ursingii]
Length=133

 Score = 206 bits (524),  Expect = 6e-74
 Identities = 94/119 (79%), Positives = 111/119 (93%), Gaps = 0/119 (0%)

Query  1    VLDQLAAIWNGLLSSLDSVPEDSIAVTAYVGGTILVLWCWYSIAKRLPKLIGGVTWIVLF  60
            +LDQL+AIWNGLLSSLDSVPEDSIAVT YV GTI+VLWCWY +AKRLP L+GG++WIVLF
Sbjct  1    MLDQLSAIWNGLLSSLDSVPEDSIAVTVYVVGTIIVLWCWYGVAKRLPHLLGGISWIVLF  60

Query  61   AILATPTISEGVNAGVAPAIFGLIFGVLTKEQPLIWSNLSLILFVTGLGLLIGYLWSKY  119
            AILATPT+S+G NA +APAIFG++FGVLTKEQ LIW+N+SLIL VTG+GL++GYLWSKY
Sbjct  61   AILATPTVSDGANAEIAPAIFGVLFGVLTKEQALIWANVSLILLVTGVGLIVGYLWSKY  119


>A0A3A8ECK2 Resolvase [Acinetobacter guerrae]
Length=133

 Score = 204 bits (518),  Expect = 5e-73
 Identities = 93/127 (73%), Positives = 114/127 (90%), Gaps = 0/127 (0%)

Query  1    VLDQLAAIWNGLLSSLDSVPEDSIAVTAYVGGTILVLWCWYSIAKRLPKLIGGVTWIVLF  60
            +L+QLAAIWN LLSSLDSVPEDSIAVT YV GTI+VLWCWY +AKRLP L+GG++WIVLF
Sbjct  1    MLEQLAAIWNSLLSSLDSVPEDSIAVTVYVVGTIIVLWCWYGVAKRLPHLLGGISWIVLF  60

Query  61   AILATPTISEGVNAGVAPAIFGLIFGVLTKEQPLIWSNLSLILFVTGLGLLIGYLWSKYS  120
            AILATPT+S+G NA +APAIFG++FG+LTKEQPL+W+N SLIL V G+GL+IGYLWSKY 
Sbjct  61   AILATPTVSDGANAEIAPAIFGVLFGILTKEQPLVWANTSLILLVIGVGLVIGYLWSKYR  120

Query  121  ESRDTTS  127
             ++ T++
Sbjct  121  MNKLTSN  127


>N9BYN2 Uncharacterized protein [Acinetobacter ursingii ANC 3649]
Length=133

 Score = 204 bits (518),  Expect = 5e-73
 Identities = 93/119 (78%), Positives = 110/119 (92%), Gaps = 0/119 (0%)

Query  1    VLDQLAAIWNGLLSSLDSVPEDSIAVTAYVGGTILVLWCWYSIAKRLPKLIGGVTWIVLF  60
            +LDQL+AIWNGLLSSLDSVPEDSIAVT YV GTI+VLWCWY +AKRLP L+GG++WIVLF
Sbjct  1    MLDQLSAIWNGLLSSLDSVPEDSIAVTVYVVGTIIVLWCWYGVAKRLPHLLGGISWIVLF  60

Query  61   AILATPTISEGVNAGVAPAIFGLIFGVLTKEQPLIWSNLSLILFVTGLGLLIGYLWSKY  119
            AILATPT+S+G NA +APAIFG++FGVLTKEQ L+W+N+SLIL VTG+GL+IGY WSKY
Sbjct  61   AILATPTVSDGANAEIAPAIFGVLFGVLTKEQALVWANVSLILLVTGVGLIIGYSWSKY  119


>A0A427PVK8 Uncharacterized protein [Acinetobacter sp. FDAARGOS_515]
Length=133

 Score = 204 bits (518),  Expect = 5e-73
 Identities = 93/119 (78%), Positives = 110/119 (92%), Gaps = 0/119 (0%)

Query  1    VLDQLAAIWNGLLSSLDSVPEDSIAVTAYVGGTILVLWCWYSIAKRLPKLIGGVTWIVLF  60
            +LDQL+AIWNGLLSSLDSVPEDSIAVT YV GTI+VLWCWY +AKRLP L+GG++WIVLF
Sbjct  1    MLDQLSAIWNGLLSSLDSVPEDSIAVTVYVVGTIIVLWCWYGVAKRLPHLLGGISWIVLF  60

Query  61   AILATPTISEGVNAGVAPAIFGLIFGVLTKEQPLIWSNLSLILFVTGLGLLIGYLWSKY  119
            AILATPT+S+G NA +APAIFG++FGVLTKEQ L+W+N+SLIL VTG+GL+IGY WSKY
Sbjct  61   AILATPTVSDGANAEIAPAIFGVLFGVLTKEQALVWANVSLILLVTGVGLIIGYSWSKY  119


>A0A3A8F0Z3 Uncharacterized protein [Acinetobacter rongchengensis]
Length=138

 Score = 188 bits (478),  Expect = 7e-67
 Identities = 83/125 (66%), Positives = 107/125 (86%), Gaps = 0/125 (0%)

Query  1    VLDQLAAIWNGLLSSLDSVPEDSIAVTAYVGGTILVLWCWYSIAKRLPKLIGGVTWIVLF  60
            VL+QL+ IW   L   DS+PED+IA++ YV GT+L+LWCWYSIAKRLP  +GG+TWI+LF
Sbjct  2    VLEQLSGIWANFLHLFDSIPEDNIAISVYVLGTVLILWCWYSIAKRLPSPLGGITWIILF  61

Query  61   AILATPTISEGVNAGVAPAIFGLIFGVLTKEQPLIWSNLSLILFVTGLGLLIGYLWSKYS  120
            AI+ATPTISEG N+ VAPAIFGL+FGVLTK+ PLIWSNL+LI+FV G+GL++G+ WSKY+
Sbjct  62   AIIATPTISEGPNSEVAPAIFGLLFGVLTKDSPLIWSNLALIVFVIGVGLIVGFCWSKYT  121

Query  121  ESRDT  125
             ++ T
Sbjct  122  ANKST  126


>N8WWU5 Uncharacterized protein [Acinetobacter guillouiae NIPH 
991]
Length=138

 Score = 188 bits (477),  Expect = 9e-67
 Identities = 80/125 (64%), Positives = 106/125 (85%), Gaps = 0/125 (0%)

Query  1    VLDQLAAIWNGLLSSLDSVPEDSIAVTAYVGGTILVLWCWYSIAKRLPKLIGGVTWIVLF  60
            VLDQL+ IW   L   D++PED+IA+T Y+ GT+L+LWCWYSI+KRLP  +GG+TWI++F
Sbjct  2    VLDQLSGIWANFLDLFDAIPEDNIAITVYILGTLLILWCWYSISKRLPSPLGGITWIIVF  61

Query  61   AILATPTISEGVNAGVAPAIFGLIFGVLTKEQPLIWSNLSLILFVTGLGLLIGYLWSKYS  120
            A+LATPTISEG N+ +APAIFGL+FG+LTK+ PLIWSNL+LI FV G+GL+IG+ WSKY 
Sbjct  62   AVLATPTISEGPNSAIAPAIFGLLFGILTKDSPLIWSNLALITFVMGIGLVIGFFWSKYK  121

Query  121  ESRDT  125
             +++T
Sbjct  122  TTKNT  126


>A0A0Q7FQ43 Resolvase [Acinetobacter sp. Root1280]
Length=146

 Score = 188 bits (477),  Expect = 1e-66
 Identities = 80/125 (64%), Positives = 106/125 (85%), Gaps = 0/125 (0%)

Query  1    VLDQLAAIWNGLLSSLDSVPEDSIAVTAYVGGTILVLWCWYSIAKRLPKLIGGVTWIVLF  60
            VLDQL+ IW   L   D++PED+IA+T Y+ GT+L+LWCWYSI+KRLP  +GG+TWI++F
Sbjct  10   VLDQLSGIWANFLDLFDAIPEDNIAITVYILGTLLILWCWYSISKRLPSPLGGITWIIVF  69

Query  61   AILATPTISEGVNAGVAPAIFGLIFGVLTKEQPLIWSNLSLILFVTGLGLLIGYLWSKYS  120
            A+LATPTISEG N+ +APAIFGL+FG+LTK+ PLIWSNL+LI FV G+GL+IG+ WSKY 
Sbjct  70   AVLATPTISEGPNSAIAPAIFGLLFGILTKDSPLIWSNLALITFVMGIGLVIGFFWSKYK  129

Query  121  ESRDT  125
             +++T
Sbjct  130  TTKNT  134


>A0A6A1RTW4 Uncharacterized protein [Acinetobacter guillouiae]
Length=146

 Score = 188 bits (477),  Expect = 1e-66
 Identities = 80/125 (64%), Positives = 106/125 (85%), Gaps = 0/125 (0%)

Query  1    VLDQLAAIWNGLLSSLDSVPEDSIAVTAYVGGTILVLWCWYSIAKRLPKLIGGVTWIVLF  60
            VLDQL+ IW   L   D++PED+IA+T Y+ GT+L+LWCWYSI+KRLP  +GG+TWI++F
Sbjct  10   VLDQLSGIWANFLDLFDAIPEDNIAITVYILGTLLILWCWYSISKRLPSPLGGITWIIVF  69

Query  61   AILATPTISEGVNAGVAPAIFGLIFGVLTKEQPLIWSNLSLILFVTGLGLLIGYLWSKYS  120
            A+LATPTISEG N+ +APAIFGL+FG+LTK+ PLIWSNL+LI FV G+GL+IG+ WSKY 
Sbjct  70   AVLATPTISEGPNSAIAPAIFGLLFGILTKDSPLIWSNLALITFVMGIGLVIGFFWSKYK  129

Query  121  ESRDT  125
             +++T
Sbjct  130  TTKNT  134



Lambda      K        H        a         alpha
   0.327    0.143    0.455    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 131614


  Database: d12c6a6ca60542bce811f50cfcb4ccc9.TrEMBL.fasta
    Posted date:  May 9, 2024  10:46 AM
  Number of letters in database: 1,746
  Number of sequences in database:  13



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40