BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: cab4486bdf915b9db22a9b4ffe5287cf.SwissProt.fasta
30 sequences; 6,288 total letters
Query= ACIAD2313
Length=111
Score E
Sequences producing significant alignments: (Bits) Value
B0VPL6 Nucleoid-associated protein ABSDF1914 [Acinetobacter bauma... 189 2e-67
B7I5V5 Nucleoid-associated protein AB57_1909 [Acinetobacter bauma... 189 2e-67
A3M5B7 Nucleoid-associated protein A1S_1684 [Acinetobacter bauman... 189 2e-67
B2I0A5 Nucleoid-associated protein ACICU_01718 [Acinetobacter bau... 189 2e-67
B0VDW7 Nucleoid-associated protein ABAYE1967 [Acinetobacter bauma... 189 2e-67
Q1QCM1 Nucleoid-associated protein Pcryo_0799 [Psychrobacter cryo... 154 1e-53
Q4FTL2 Nucleoid-associated protein Psyc_0793 [Psychrobacter arcti... 150 4e-52
A5WG78 Nucleoid-associated protein PsycPRwf_1729 [Psychrobacter s... 145 4e-50
A1WTL3 Nucleoid-associated protein Hhal_0231 [Halorhodospira halo... 116 2e-38
A1U127 Nucleoid-associated protein Maqu_1612 [Marinobacter nautic... 114 2e-37
A4JEQ4 Nucleoid-associated protein Bcep1808_1753 [Burkholderia vi... 112 5e-37
B1YRE8 Nucleoid-associated protein BamMC406_1737 [Burkholderia am... 112 5e-37
Q0BEV3 Nucleoid-associated protein Bamb_1764 [Burkholderia ambifa... 112 5e-37
A9AGY0 Nucleoid-associated protein Bmul_1447/BMULJ_01796 [Burkhol... 112 9e-37
Q39FP5 Nucleoid-associated protein Bcep18194_A5127 [Burkholderia ... 112 9e-37
B4EAY3 Nucleoid-associated protein BceJ2315_18610 [Burkholderia c... 112 9e-37
Q1BGY8 Nucleoid-associated protein Bcen_6253 [Burkholderia orbico... 112 9e-37
A0K7V0 Nucleoid-associated protein Bcen2424_1826 [Burkholderia ce... 112 9e-37
B1JTA6 Nucleoid-associated protein Bcenmc03_1850 [Burkholderia or... 112 9e-37
B2JG59 Nucleoid-associated protein Bphy_0952 [Paraburkholderia ph... 110 3e-36
P44711 Nucleoid-associated protein HI_0442 [Haemophilus influenza... 105 5e-34
P0A8B5 Nucleoid-associated protein YbaB [Escherichia coli (strain... 103 2e-33
P24281 Nucleoid-associated protein YaaK [Bacillus subtilis (strai... 70.1 3e-20
P9WNR9 Nucleoid-associated protein Rv3716c [Mycobacterium tubercu... 64.7 7e-18
Q9RXV7 Nucleoid-associated protein DR_0199 [Deinococcus radiodura... 59.7 3e-16
Q9M098 Nucleoid-associated protein At4g30620, chloroplastic [Arab... 53.5 3e-13
O82230 Nucleoid-associated protein At2g24020, chloroplastic [Arab... 53.1 4e-13
O34247 Nucleoid-associated protein WS1681 [Wolinella succinogenes... 46.2 5e-11
Q9HRY2 Chaperone protein DnaK [Halobacterium salinarum (strain AT... 32.3 2e-05
Q6RT24 Centromere-associated protein E [Mus musculus] 32.3 2e-05
>B0VPL6 Nucleoid-associated protein ABSDF1914 [Acinetobacter baumannii
(strain SDF)]
Length=109
Score = 189 bits (481), Expect = 2e-67
Identities = 94/109 (86%), Positives = 105/109 (96%), Gaps = 0/109 (0%)
Query 2 MNINMLMQQAQRMQKDMEANAKKAKEELAKTEVQAEAGGGLVKVTMTGRFVVKRIEINPD 61
MNINMLMQQAQRMQKDME+N KKAKEELA+TEV AEAGGGLVKVTMTGR++VKRIEINP+
Sbjct 1 MNINMLMQQAQRMQKDMESNIKKAKEELAQTEVHAEAGGGLVKVTMTGRYIVKRIEINPE 60
Query 62 LLQDEPEMIEDLIAAAVNDAVRQAEAVADEKMKGANSGMGLPPGLSGLF 110
LLQDEP+MIEDLIAAAVNDAVRQAE V++EKM+ ANSGMGLPPGL+G+F
Sbjct 61 LLQDEPDMIEDLIAAAVNDAVRQAEVVSEEKMQKANSGMGLPPGLAGMF 109
>B7I5V5 Nucleoid-associated protein AB57_1909 [Acinetobacter baumannii
(strain AB0057)]
Length=109
Score = 189 bits (481), Expect = 2e-67
Identities = 94/109 (86%), Positives = 105/109 (96%), Gaps = 0/109 (0%)
Query 2 MNINMLMQQAQRMQKDMEANAKKAKEELAKTEVQAEAGGGLVKVTMTGRFVVKRIEINPD 61
MNINMLMQQAQRMQKDME+N KKAKEELA+TEV AEAGGGLVKVTMTGR++VKRIEINP+
Sbjct 1 MNINMLMQQAQRMQKDMESNIKKAKEELAQTEVHAEAGGGLVKVTMTGRYIVKRIEINPE 60
Query 62 LLQDEPEMIEDLIAAAVNDAVRQAEAVADEKMKGANSGMGLPPGLSGLF 110
LLQDEP+MIEDLIAAAVNDAVRQAE V++EKM+ ANSGMGLPPGL+G+F
Sbjct 61 LLQDEPDMIEDLIAAAVNDAVRQAEVVSEEKMQKANSGMGLPPGLAGMF 109
>A3M5B7 Nucleoid-associated protein A1S_1684 [Acinetobacter baumannii
(strain ATCC 17978 / CIP 53.77 / LMG 1025 / NCDC KC755
/ 5377)]
Length=109
Score = 189 bits (481), Expect = 2e-67
Identities = 94/109 (86%), Positives = 105/109 (96%), Gaps = 0/109 (0%)
Query 2 MNINMLMQQAQRMQKDMEANAKKAKEELAKTEVQAEAGGGLVKVTMTGRFVVKRIEINPD 61
MNINMLMQQAQRMQKDME+N KKAKEELA+TEV AEAGGGLVKVTMTGR++VKRIEINP+
Sbjct 1 MNINMLMQQAQRMQKDMESNIKKAKEELAQTEVHAEAGGGLVKVTMTGRYIVKRIEINPE 60
Query 62 LLQDEPEMIEDLIAAAVNDAVRQAEAVADEKMKGANSGMGLPPGLSGLF 110
LLQDEP+MIEDLIAAAVNDAVRQAE V++EKM+ ANSGMGLPPGL+G+F
Sbjct 61 LLQDEPDMIEDLIAAAVNDAVRQAEVVSEEKMQKANSGMGLPPGLAGMF 109
>B2I0A5 Nucleoid-associated protein ACICU_01718 [Acinetobacter
baumannii (strain ACICU)]
Length=109
Score = 189 bits (481), Expect = 2e-67
Identities = 94/109 (86%), Positives = 105/109 (96%), Gaps = 0/109 (0%)
Query 2 MNINMLMQQAQRMQKDMEANAKKAKEELAKTEVQAEAGGGLVKVTMTGRFVVKRIEINPD 61
MNINMLMQQAQRMQKDME+N KKAKEELA+TEV AEAGGGLVKVTMTGR++VKRIEINP+
Sbjct 1 MNINMLMQQAQRMQKDMESNIKKAKEELAQTEVHAEAGGGLVKVTMTGRYIVKRIEINPE 60
Query 62 LLQDEPEMIEDLIAAAVNDAVRQAEAVADEKMKGANSGMGLPPGLSGLF 110
LLQDEP+MIEDLIAAAVNDAVRQAE V++EKM+ ANSGMGLPPGL+G+F
Sbjct 61 LLQDEPDMIEDLIAAAVNDAVRQAEVVSEEKMQKANSGMGLPPGLAGMF 109
>B0VDW7 Nucleoid-associated protein ABAYE1967 [Acinetobacter baumannii
(strain AYE)]
Length=109
Score = 189 bits (481), Expect = 2e-67
Identities = 94/109 (86%), Positives = 105/109 (96%), Gaps = 0/109 (0%)
Query 2 MNINMLMQQAQRMQKDMEANAKKAKEELAKTEVQAEAGGGLVKVTMTGRFVVKRIEINPD 61
MNINMLMQQAQRMQKDME+N KKAKEELA+TEV AEAGGGLVKVTMTGR++VKRIEINP+
Sbjct 1 MNINMLMQQAQRMQKDMESNIKKAKEELAQTEVHAEAGGGLVKVTMTGRYIVKRIEINPE 60
Query 62 LLQDEPEMIEDLIAAAVNDAVRQAEAVADEKMKGANSGMGLPPGLSGLF 110
LLQDEP+MIEDLIAAAVNDAVRQAE V++EKM+ ANSGMGLPPGL+G+F
Sbjct 61 LLQDEPDMIEDLIAAAVNDAVRQAEVVSEEKMQKANSGMGLPPGLAGMF 109
>Q1QCM1 Nucleoid-associated protein Pcryo_0799 [Psychrobacter
cryohalolentis (strain ATCC BAA-1226 / DSM 17306 / VKM B-2378
/ K5)]
Length=109
Score = 154 bits (390), Expect = 1e-53
Identities = 77/109 (71%), Positives = 90/109 (83%), Gaps = 0/109 (0%)
Query 2 MNINMLMQQAQRMQKDMEANAKKAKEELAKTEVQAEAGGGLVKVTMTGRFVVKRIEINPD 61
MNI LMQQAQ MQK +EAN + AK+EL EV AEAG GLVKVTMTGR VVKR+ I+P
Sbjct 1 MNIQALMQQAQTMQKKVEANVENAKKELGNKEVHAEAGSGLVKVTMTGRHVVKRLTIDPS 60
Query 62 LLQDEPEMIEDLIAAAVNDAVRQAEAVADEKMKGANSGMGLPPGLSGLF 110
LL+DEP+MIEDLIAAA+NDAVRQA+A+ +E M GA SGMGLPPG+ G+F
Sbjct 61 LLEDEPDMIEDLIAAAINDAVRQADALYEETMAGATSGMGLPPGMQGMF 109
>Q4FTL2 Nucleoid-associated protein Psyc_0793 [Psychrobacter arcticus
(strain DSM 17307 / VKM B-2377 / 273-4)]
Length=109
Score = 150 bits (380), Expect = 4e-52
Identities = 75/109 (69%), Positives = 89/109 (82%), Gaps = 0/109 (0%)
Query 2 MNINMLMQQAQRMQKDMEANAKKAKEELAKTEVQAEAGGGLVKVTMTGRFVVKRIEINPD 61
MNI LMQQAQ MQK +EAN + AK++LA EV AEAG GLVKVTMTGR VVKR+ I+P
Sbjct 1 MNIQALMQQAQTMQKKVEANVENAKKDLANKEVHAEAGSGLVKVTMTGRHVVKRLTIDPS 60
Query 62 LLQDEPEMIEDLIAAAVNDAVRQAEAVADEKMKGANSGMGLPPGLSGLF 110
LL+DEP+MIEDLIAAA+NDAVRQA+ + + M GA SGMGLPPG+ G+F
Sbjct 61 LLEDEPDMIEDLIAAAINDAVRQADELYETTMAGATSGMGLPPGMQGMF 109
>A5WG78 Nucleoid-associated protein PsycPRwf_1729 [Psychrobacter
sp. (strain PRwf-1)]
Length=110
Score = 145 bits (367), Expect = 4e-50
Identities = 73/109 (67%), Positives = 89/109 (82%), Gaps = 0/109 (0%)
Query 2 MNINMLMQQAQRMQKDMEANAKKAKEELAKTEVQAEAGGGLVKVTMTGRFVVKRIEINPD 61
MNI LMQQAQ MQK +EAN +KAK+ELA EVQAEAG GLVKVTMTGR VVKR+ I+P
Sbjct 1 MNIQALMQQAQAMQKQVEANVEKAKKELADKEVQAEAGNGLVKVTMTGRHVVKRLSIDPS 60
Query 62 LLQDEPEMIEDLIAAAVNDAVRQAEAVADEKMKGANSGMGLPPGLSGLF 110
LL+DEP++IEDLIAAA+N AV +A+ +++ + A SGMGLPPG+ GLF
Sbjct 61 LLEDEPDLIEDLIAAAINAAVTKADELSETTLAKATSGMGLPPGMQGLF 109
>A1WTL3 Nucleoid-associated protein Hhal_0231 [Halorhodospira
halophila (strain DSM 244 / SL1)]
Length=107
Score = 116 bits (290), Expect = 2e-38
Identities = 56/100 (56%), Positives = 78/100 (78%), Gaps = 4/100 (4%)
Query 7 LMQQAQRMQKDMEANAKKAKEELAKTEVQAEAGGGLVKVTMTGRFVVKRIEINPDLLQDE 66
+M+QAQ+MQ+DM+ KA+EE+A EV EAG G+VKVTMTGR V+++EI+P L +D+
Sbjct 8 IMKQAQKMQEDMQ----KAQEEIAAMEVSGEAGAGMVKVTMTGRNEVRKVEIDPSLFEDD 63
Query 67 PEMIEDLIAAAVNDAVRQAEAVADEKMKGANSGMGLPPGL 106
EM+EDL+AAAVNDAV++ + + E+M G GMGLPPG+
Sbjct 64 REMVEDLVAAAVNDAVQKVQRESQERMSGMAEGMGLPPGM 103
>A1U127 Nucleoid-associated protein Maqu_1612 [Marinobacter nauticus
(strain ATCC 700491 / DSM 11845 / VT8)]
Length=107
Score = 114 bits (284), Expect = 2e-37
Identities = 57/103 (55%), Positives = 79/103 (77%), Gaps = 4/103 (4%)
Query 3 NINMLMQQAQRMQKDMEANAKKAKEELAKTEVQAEAGGGLVKVTMTGRFVVKRIEINPDL 62
N+ LM++AQ+MQ+ M+ KA+EE+AK EV E+G GLVKVTM GR V++++I+P L
Sbjct 4 NMGDLMKKAQQMQEQMQ----KAQEEIAKAEVTGESGAGLVKVTMNGRHDVRKVDIDPSL 59
Query 63 LQDEPEMIEDLIAAAVNDAVRQAEAVADEKMKGANSGMGLPPG 105
L ++ E++EDL+AAAVNDAVR+ EA +KM G SGMG+PPG
Sbjct 60 LSEDKEILEDLLAAAVNDAVRRVEANQKDKMSGMMSGMGMPPG 102
>A4JEQ4 Nucleoid-associated protein Bcep1808_1753 [Burkholderia
vietnamiensis (strain G4 / LMG 22486)]
Length=108
Score = 112 bits (281), Expect = 5e-37
Identities = 58/103 (56%), Positives = 79/103 (77%), Gaps = 4/103 (4%)
Query 3 NINMLMQQAQRMQKDMEANAKKAKEELAKTEVQAEAGGGLVKVTMTGRFVVKRIEINPDL 62
N+ LM+QAQ+MQ++M KK +E+LA+ EV+ ++G GLVKVTMT R V+R+ I+P L
Sbjct 5 NLAGLMKQAQQMQENM----KKMQEQLAQIEVEGQSGAGLVKVTMTCRNEVRRVAIDPSL 60
Query 63 LQDEPEMIEDLIAAAVNDAVRQAEAVADEKMKGANSGMGLPPG 105
L D+ +M+EDL+AAA NDAVR+AEA + EKM G SG+ LPPG
Sbjct 61 LADDKDMLEDLVAAAFNDAVRKAEATSQEKMSGMTSGLPLPPG 103
>B1YRE8 Nucleoid-associated protein BamMC406_1737 [Burkholderia
ambifaria (strain MC40-6)]
Length=108
Score = 112 bits (281), Expect = 5e-37
Identities = 58/103 (56%), Positives = 79/103 (77%), Gaps = 4/103 (4%)
Query 3 NINMLMQQAQRMQKDMEANAKKAKEELAKTEVQAEAGGGLVKVTMTGRFVVKRIEINPDL 62
N+ LM+QAQ+MQ++M KK +E+LA+ EV+ ++G GLVKVTMT R V+R+ I+P L
Sbjct 5 NLAGLMKQAQQMQENM----KKMQEQLAQIEVEGQSGAGLVKVTMTCRNEVRRVAIDPSL 60
Query 63 LQDEPEMIEDLIAAAVNDAVRQAEAVADEKMKGANSGMGLPPG 105
L D+ +M+EDL+AAA NDAVR+AEA + EKM G SG+ LPPG
Sbjct 61 LADDKDMLEDLVAAAFNDAVRKAEATSQEKMSGMTSGLPLPPG 103
>Q0BEV3 Nucleoid-associated protein Bamb_1764 [Burkholderia ambifaria
(strain ATCC BAA-244 / AMMD)]
Length=108
Score = 112 bits (281), Expect = 5e-37
Identities = 58/103 (56%), Positives = 79/103 (77%), Gaps = 4/103 (4%)
Query 3 NINMLMQQAQRMQKDMEANAKKAKEELAKTEVQAEAGGGLVKVTMTGRFVVKRIEINPDL 62
N+ LM+QAQ+MQ++M KK +E+LA+ EV+ ++G GLVKVTMT R V+R+ I+P L
Sbjct 5 NLAGLMKQAQQMQENM----KKMQEQLAQIEVEGQSGAGLVKVTMTCRNEVRRVAIDPSL 60
Query 63 LQDEPEMIEDLIAAAVNDAVRQAEAVADEKMKGANSGMGLPPG 105
L D+ +M+EDL+AAA NDAVR+AEA + EKM G SG+ LPPG
Sbjct 61 LADDKDMLEDLVAAAFNDAVRKAEATSQEKMSGMTSGLPLPPG 103
>A9AGY0 Nucleoid-associated protein Bmul_1447/BMULJ_01796 [Burkholderia
multivorans (strain ATCC 17616 / 249)]
Length=108
Score = 112 bits (279), Expect = 9e-37
Identities = 57/103 (55%), Positives = 79/103 (77%), Gaps = 4/103 (4%)
Query 3 NINMLMQQAQRMQKDMEANAKKAKEELAKTEVQAEAGGGLVKVTMTGRFVVKRIEINPDL 62
N+ LM+QAQ+MQ++M +K +E+LA+ EV+ ++G GLVKVTMT R V+R+ I+P L
Sbjct 5 NLAGLMKQAQQMQENM----RKMQEQLAQIEVEGQSGAGLVKVTMTCRNEVRRVSIDPSL 60
Query 63 LQDEPEMIEDLIAAAVNDAVRQAEAVADEKMKGANSGMGLPPG 105
L D+ +M+EDL+AAA NDAVR+AEA + EKM G SG+ LPPG
Sbjct 61 LADDKDMLEDLVAAAFNDAVRKAEATSQEKMSGMTSGLPLPPG 103
>Q39FP5 Nucleoid-associated protein Bcep18194_A5127 [Burkholderia
lata (strain ATCC 17760 / DSM 23089 / LMG 22485 / NCIMB
9086 / R18194 / 383)]
Length=108
Score = 112 bits (279), Expect = 9e-37
Identities = 58/103 (56%), Positives = 78/103 (76%), Gaps = 4/103 (4%)
Query 3 NINMLMQQAQRMQKDMEANAKKAKEELAKTEVQAEAGGGLVKVTMTGRFVVKRIEINPDL 62
N+ LM+QAQ+MQ++M KK +E+LA EV+ ++G GLVKVTMT R V+R+ I+P L
Sbjct 5 NLAGLMKQAQQMQENM----KKMQEQLALIEVEGQSGAGLVKVTMTCRNEVRRVSIDPSL 60
Query 63 LQDEPEMIEDLIAAAVNDAVRQAEAVADEKMKGANSGMGLPPG 105
L D+ +M+EDL+AAA NDAVR+AEA + EKM G SG+ LPPG
Sbjct 61 LADDKDMLEDLVAAAFNDAVRKAEATSQEKMSGMTSGLPLPPG 103
>B4EAY3 Nucleoid-associated protein BceJ2315_18610 [Burkholderia
cenocepacia (strain ATCC BAA-245 / DSM 16553 / LMG 16656
/ NCTC 13227 / J2315 / CF5610)]
Length=108
Score = 112 bits (279), Expect = 9e-37
Identities = 58/103 (56%), Positives = 78/103 (76%), Gaps = 4/103 (4%)
Query 3 NINMLMQQAQRMQKDMEANAKKAKEELAKTEVQAEAGGGLVKVTMTGRFVVKRIEINPDL 62
N+ LM+QAQ+MQ++M KK +E+LA EV+ ++G GLVKVTMT R V+R+ I+P L
Sbjct 5 NLAGLMKQAQQMQENM----KKMQEQLALIEVEGQSGAGLVKVTMTCRNEVRRVSIDPSL 60
Query 63 LQDEPEMIEDLIAAAVNDAVRQAEAVADEKMKGANSGMGLPPG 105
L D+ +M+EDL+AAA NDAVR+AEA + EKM G SG+ LPPG
Sbjct 61 LADDKDMLEDLVAAAFNDAVRKAEATSQEKMSGMTSGLPLPPG 103
>Q1BGY8 Nucleoid-associated protein Bcen_6253 [Burkholderia orbicola
(strain AU 1054)]
Length=108
Score = 112 bits (279), Expect = 9e-37
Identities = 58/103 (56%), Positives = 78/103 (76%), Gaps = 4/103 (4%)
Query 3 NINMLMQQAQRMQKDMEANAKKAKEELAKTEVQAEAGGGLVKVTMTGRFVVKRIEINPDL 62
N+ LM+QAQ+MQ++M KK +E+LA EV+ ++G GLVKVTMT R V+R+ I+P L
Sbjct 5 NLAGLMKQAQQMQENM----KKMQEQLALIEVEGQSGAGLVKVTMTCRNEVRRVSIDPSL 60
Query 63 LQDEPEMIEDLIAAAVNDAVRQAEAVADEKMKGANSGMGLPPG 105
L D+ +M+EDL+AAA NDAVR+AEA + EKM G SG+ LPPG
Sbjct 61 LADDKDMLEDLVAAAFNDAVRKAEATSQEKMSGMTSGLPLPPG 103
>A0K7V0 Nucleoid-associated protein Bcen2424_1826 [Burkholderia
cenocepacia (strain HI2424)]
Length=108
Score = 112 bits (279), Expect = 9e-37
Identities = 58/103 (56%), Positives = 78/103 (76%), Gaps = 4/103 (4%)
Query 3 NINMLMQQAQRMQKDMEANAKKAKEELAKTEVQAEAGGGLVKVTMTGRFVVKRIEINPDL 62
N+ LM+QAQ+MQ++M KK +E+LA EV+ ++G GLVKVTMT R V+R+ I+P L
Sbjct 5 NLAGLMKQAQQMQENM----KKMQEQLALIEVEGQSGAGLVKVTMTCRNEVRRVSIDPSL 60
Query 63 LQDEPEMIEDLIAAAVNDAVRQAEAVADEKMKGANSGMGLPPG 105
L D+ +M+EDL+AAA NDAVR+AEA + EKM G SG+ LPPG
Sbjct 61 LADDKDMLEDLVAAAFNDAVRKAEATSQEKMSGMTSGLPLPPG 103
>B1JTA6 Nucleoid-associated protein Bcenmc03_1850 [Burkholderia
orbicola (strain MC0-3)]
Length=108
Score = 112 bits (279), Expect = 9e-37
Identities = 58/103 (56%), Positives = 78/103 (76%), Gaps = 4/103 (4%)
Query 3 NINMLMQQAQRMQKDMEANAKKAKEELAKTEVQAEAGGGLVKVTMTGRFVVKRIEINPDL 62
N+ LM+QAQ+MQ++M KK +E+LA EV+ ++G GLVKVTMT R V+R+ I+P L
Sbjct 5 NLAGLMKQAQQMQENM----KKMQEQLALIEVEGQSGAGLVKVTMTCRNEVRRVSIDPSL 60
Query 63 LQDEPEMIEDLIAAAVNDAVRQAEAVADEKMKGANSGMGLPPG 105
L D+ +M+EDL+AAA NDAVR+AEA + EKM G SG+ LPPG
Sbjct 61 LADDKDMLEDLVAAAFNDAVRKAEATSQEKMSGMTSGLPLPPG 103
>B2JG59 Nucleoid-associated protein Bphy_0952 [Paraburkholderia
phymatum (strain DSM 17167 / CIP 108236 / LMG 21445 / STM815)]
Length=108
Score = 110 bits (276), Expect = 3e-36
Identities = 57/99 (58%), Positives = 77/99 (78%), Gaps = 4/99 (4%)
Query 7 LMQQAQRMQKDMEANAKKAKEELAKTEVQAEAGGGLVKVTMTGRFVVKRIEINPDLLQDE 66
LM+QAQ+MQ++M KK +E+LA+ EV+ ++G GLVKVTMT + V+R+ I+P LL D+
Sbjct 9 LMKQAQQMQENM----KKMQEQLAQIEVEGQSGAGLVKVTMTCKNDVRRVSIDPSLLADD 64
Query 67 PEMIEDLIAAAVNDAVRQAEAVADEKMKGANSGMGLPPG 105
+M+EDL+AAA NDAVR+AEA A EKM G SG+ LPPG
Sbjct 65 KDMLEDLVAAAFNDAVRKAEATAQEKMGGMTSGLPLPPG 103
>P44711 Nucleoid-associated protein HI_0442 [Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd)]
Length=109
Score = 105 bits (261), Expect = 5e-34
Identities = 53/100 (53%), Positives = 74/100 (74%), Gaps = 4/100 (4%)
Query 7 LMQQAQRMQKDMEANAKKAKEELAKTEVQAEAGGGLVKVTMTGRFVVKRIEINPDLLQDE 66
LM+QAQ+MQ+ M+ K +EE+A+ EV E+G GLVK+T+ G +RI+I+P L++D+
Sbjct 10 LMKQAQQMQEKMQ----KMQEEIAQLEVTGESGAGLVKITINGAHNCRRIDIDPSLMEDD 65
Query 67 PEMIEDLIAAAVNDAVRQAEAVADEKMKGANSGMGLPPGL 106
EM+EDLIAAA NDAVR+AE + EKM +GM LPPG+
Sbjct 66 KEMLEDLIAAAFNDAVRRAEELQKEKMASVTAGMPLPPGM 105
>P0A8B5 Nucleoid-associated protein YbaB [Escherichia coli (strain
K12)]
Length=109
Score = 103 bits (257), Expect = 2e-33
Identities = 53/99 (54%), Positives = 71/99 (72%), Gaps = 4/99 (4%)
Query 7 LMQQAQRMQKDMEANAKKAKEELAKTEVQAEAGGGLVKVTMTGRFVVKRIEINPDLLQDE 66
LM+QAQ+MQ+ M+ K +EE+A+ EV E+G GLVKVT+ G +R+EI+P LL+D+
Sbjct 10 LMKQAQQMQEKMQ----KMQEEIAQLEVTGESGAGLVKVTINGAHNCRRVEIDPSLLEDD 65
Query 67 PEMIEDLIAAAVNDAVRQAEAVADEKMKGANSGMGLPPG 105
EM+EDL+AAA NDA R+ E EKM +SGM LPPG
Sbjct 66 KEMLEDLVAAAFNDAARRIEETQKEKMASVSSGMQLPPG 104
>P24281 Nucleoid-associated protein YaaK [Bacillus subtilis (strain
168)]
Length=107
Score = 70.1 bits (170), Expect = 3e-20
Identities = 40/109 (37%), Positives = 66/109 (61%), Gaps = 9/109 (8%)
Query 3 NINMLMQQAQRMQKDMEANAKKAKEELAKTEVQAEAGGGLVKVTMTGRFVVKRIEINPDL 62
N+ +M+Q Q+MQKDM KA+EELA+ V+ AGGG+V V G+ + + I ++
Sbjct 7 NMQKMMKQMQKMQKDMA----KAQEELAEKVVEGTAGGGMVTVKANGQKEILDVIIKEEV 62
Query 63 LQDEP-EMIEDLIAAAVNDAVRQAEAVADEKMKGANSGMGLPPGLSGLF 110
+ E +M++DL+ AA N+A+++ + + +E M GM +P GLF
Sbjct 63 VDPEDIDMLQDLVLAATNEALKKVDEITNETMGQFTKGMNMP----GLF 107
>P9WNR9 Nucleoid-associated protein Rv3716c [Mycobacterium tuberculosis
(strain ATCC 25618 / H37Rv)]
Length=133
Score = 64.7 bits (156), Expect = 7e-18
Identities = 39/103 (38%), Positives = 66/103 (64%), Gaps = 6/103 (6%)
Query 3 NINMLMQQAQRMQKDMEANAKKAKEELAKTEVQAEAGGGLVKVTMTGRFVVKRIEINPDL 62
+++ L+ QAQ+MQ+ + +A+++LA +EV +AGGGLVKV + G V + I+P +
Sbjct 6 DMSALLAQAQQMQQKL----LEAQQQLANSEVHGQAGGGLVKVVVKGSGEVIGVTIDPKV 61
Query 63 LQ-DEPEMIEDLIAAAVNDAVRQAEAVADEKMKGANSGMGLPP 104
+ D+ E ++DLI A+ DA +Q +A E++ GA +G PP
Sbjct 62 VDPDDIETLQDLIVGAMRDASQQVTKMAQERL-GALAGAMRPP 103
>Q9RXV7 Nucleoid-associated protein DR_0199 [Deinococcus radiodurans
(strain ATCC 13939 / DSM 20539 / JCM 16871 / CCUG 27074
/ LMG 4051 / NBRC 15346 / NCIMB 9279 / VKM B-1422 / R1)]
Length=96
Score = 59.7 bits (143), Expect = 3e-16
Identities = 41/103 (40%), Positives = 59/103 (57%), Gaps = 10/103 (10%)
Query 2 MNINMLMQQAQRMQKDMEANAKKAKEELAKTEVQAEAGGGLVKVTMTGRFVVKRIEINPD 61
M++ LM+Q Q+ Q A K ++ELA V+ A G LV V M G V ++I P+
Sbjct 1 MDMKKLMKQMQQAQ----VAAGKIQDELAAQSVEGTASG-LVTVQMNGHGKVTSLKIKPE 55
Query 62 LLQ-DEPEMIEDLIAAAVNDAVRQAEAVADEKMKGANSGMGLP 103
+ D+ E +EDLI AA+NDA +AE + E A +G+GLP
Sbjct 56 AVDGDDVEALEDLILAAINDAAEKAEGLQRE----ATAGLGLP 94
>Q9M098 Nucleoid-associated protein At4g30620, chloroplastic [Arabidopsis
thaliana]
Length=180
Score = 53.5 bits (127), Expect = 3e-13
Identities = 32/109 (29%), Positives = 53/109 (49%), Gaps = 0/109 (0%)
Query 1 LMNINMLMQQAQRMQKDMEANAKKAKEELAKTEVQAEAGGGLVKVTMTGRFVVKRIEINP 60
L N+ L + ++ Q ++ A + ++ELA E G LVKVT++G R +I
Sbjct 71 LGNMQNLYETVKKAQMVVQVEAVRVQKELAVAEFDGYCQGELVKVTLSGNQQPIRTDITD 130
Query 61 DLLQDEPEMIEDLIAAAVNDAVRQAEAVADEKMKGANSGMGLPPGLSGL 109
++ E + L+ A DA ++ E+M +G+PPGL GL
Sbjct 131 AAMELGSEKLSLLVTEAYKDAHSKSVLAMKERMSDLAQSLGMPPGLDGL 179
>O82230 Nucleoid-associated protein At2g24020, chloroplastic [Arabidopsis
thaliana]
Length=182
Score = 53.1 bits (126), Expect = 4e-13
Identities = 29/105 (28%), Positives = 51/105 (49%), Gaps = 0/105 (0%)
Query 3 NINMLMQQAQRMQKDMEANAKKAKEELAKTEVQAEAGGGLVKVTMTGRFVVKRIEINPDL 62
N+ + + ++ Q ++ A + ++ELA E G LVKVT++G R +I
Sbjct 74 NMQNMYETVKKAQMVVQVEAVRVQKELAAAEFDGYCAGELVKVTLSGNQQPIRTDITEAA 133
Query 63 LQDEPEMIEDLIAAAVNDAVRQAEAVADEKMKGANSGMGLPPGLS 107
++ E + L+ A DA ++ E+M +G+PPGLS
Sbjct 134 MELGSEKLSQLVTEAYKDAHAKSVVAMKERMSDLAQSLGMPPGLS 178
>O34247 Nucleoid-associated protein WS1681 [Wolinella succinogenes
(strain ATCC 29543 / DSM 1740 / LMG 7466 / NCTC 11488 /
FDC 602W)]
Length=102
Score = 46.2 bits (108), Expect = 5e-11
Identities = 27/87 (31%), Positives = 46/87 (53%), Gaps = 1/87 (1%)
Query 14 MQKDMEANAKKAKEELAKTEVQAEAGGGLVKVTMTGRFVVKRIEINPDLLQDEPEMIEDL 73
M + AK+ +E+ T A++GGGLV V+M+G + + I+ LL+D+ E ++ L
Sbjct 10 MLTQFQDKAKEMEEKSHNTSFTAKSGGGLVSVSMSGAGELLDVSIDDSLLEDK-ESLQIL 68
Query 74 IAAAVNDAVRQAEAVADEKMKGANSGM 100
+ +A+ND + E G GM
Sbjct 69 LISAINDVYKSVEENKKSMTLGMLGGM 95
>Q9HRY2 Chaperone protein DnaK [Halobacterium salinarum (strain
ATCC 700922 / JCM 11081 / NRC-1)]
Length=629
Score = 32.3 bits (72), Expect = 2e-05
Identities = 30/133 (23%), Positives = 52/133 (39%), Gaps = 46/133 (35%)
Query 9 QQAQRMQKDMEANAKKAKEELAKTEVQAEAGGGLVKVTMTGRFVVKRIEINPDLLQDEPE 68
+Q MQ+D EA+A++ ++ + E + EA ++R E LL++ E
Sbjct 483 EQIDEMQEDAEAHAEEDEQRRRRIEARNEA-----------ETAIQRAE---SLLEENEE 528
Query 69 MIEDLIAAAVNDAVRQAEAVADEK--------------------------------MKGA 96
++++ + A VNDA+ +AV DE GA
Sbjct 529 LVDEDLEADVNDAIDDVQAVLDEDEPEIDALETATEELSDTLQEIGKQAYQQQQDAQAGA 588
Query 97 NSGMGLPPGLSGL 109
G G G+ G+
Sbjct 589 AGGAGGMGGMGGM 601
Score = 17.3 bits (33), Expect = 2.7
Identities = 9/33 (27%), Positives = 15/33 (45%), Gaps = 0/33 (0%)
Query 9 QQAQRMQKDMEANAKKAKEELAKTEVQAEAGGG 41
+QA + Q+D +A A + A+ GG
Sbjct 575 KQAYQQQQDAQAGAAGGAGGMGGMGGMADGPGG 607
Score = 16.9 bits (32), Expect = 3.7
Identities = 8/20 (40%), Positives = 10/20 (50%), Gaps = 0/20 (0%)
Query 70 IEDLIAAAVNDAVRQAEAVA 89
+EDL+ V EAVA
Sbjct 326 VEDLVGQEPKKNVNPDEAVA 345
Score = 15.8 bits (29), Expect = 8.9
Identities = 8/18 (44%), Positives = 9/18 (50%), Gaps = 0/18 (0%)
Query 74 IAAAVNDAVRQAEAVADE 91
+ A ND RQA A E
Sbjct 120 VPAYFNDRQRQATKDAGE 137
>Q6RT24 Centromere-associated protein E [Mus musculus]
Length=2474
Score = 32.3 bits (72), Expect = 2e-05
Identities = 25/98 (26%), Positives = 43/98 (44%), Gaps = 8/98 (8%)
Query 9 QQAQRMQKDMEANAKKAKEEL--------AKTEVQAEAGGGLVKVTMTGRFVVKRIEINP 60
+Q + +++EA +AKEEL E+ E G + + G + P
Sbjct 1212 KQLKEYAREIEAEGLQAKEELNIAHANLKEYQEIITELRGSISENEAQGASTQDTAKSAP 1271
Query 61 DLLQDEPEMIEDLIAAAVNDAVRQAEAVADEKMKGANS 98
+L + PE++E + V +A AE V + GA+S
Sbjct 1272 ELQGEVPELLEQELLPVVKEARHSAEKVNGLEPVGAHS 1309
Score = 16.2 bits (30), Expect = 6.8
Identities = 17/93 (18%), Positives = 36/93 (39%), Gaps = 12/93 (13%)
Query 8 MQQAQRMQKDMEANAKKAKEELAKTEVQAEAGGGLVKVTMTGRFVVKRIEINPDLLQDEP 67
++ ++ Q+ + KA EEL+ + GG + D + ++
Sbjct 970 LESLKQHQETINMLKMKAAEELSDNLHVKDRGGAR-----------DEAQQKMDGIDEQN 1018
Query 68 EMIEDLIAAAVNDAVRQAEAVADEKMKGANSGM 100
E L+ ++ V + + D M+ NSG+
Sbjct 1019 ESAHTLLGGGKDNEVTEEQRKIDSLMQ-ENSGL 1050
Score = 15.8 bits (29), Expect = 9.1
Identities = 8/25 (32%), Positives = 13/25 (52%), Gaps = 4/25 (16%)
Query 3 NINMLMQQAQRMQKDMEANAKKAKE 27
N+N+ QR+ + +E AKE
Sbjct 1568 NVNL----TQRLHETLEEMRSVAKE 1588
Lambda K H a alpha
0.318 0.133 0.357 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 375804
Database: cab4486bdf915b9db22a9b4ffe5287cf.SwissProt.fasta
Posted date: May 20, 2024 2:46 AM
Number of letters in database: 6,288
Number of sequences in database: 30
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
