BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: d03010d434161957aa5a3cb611c74e5d.SwissProt.fasta
10 sequences; 3,075 total letters
Query= ACIAD2329
Length=292
Score E
Sequences producing significant alignments: (Bits) Value
O34578 Probable membrane transporter protein YjnA [Bacillus subti... 165 2e-53
O05493 Probable membrane transporter protein YdhB [Bacillus subti... 83.2 2e-22
Q87AD2 Probable membrane transporter protein PD_1894 [Xylella fas... 74.3 5e-19
Q9PFB4 Probable membrane transporter protein XF_0764 [Xylella fas... 74.3 5e-19
O32134 Probable membrane transporter protein YunE [Bacillus subti... 69.3 3e-17
Q57883 Probable membrane transporter protein MJ0441 [Methanocaldo... 67.8 1e-16
P44070 Probable membrane transporter protein HI_0902 [Haemophilus... 49.3 2e-10
Q7NEY9 Phospho-N-acetylmuramoyl-pentapeptide-transferase [Gloeoba... 37.4 2e-06
A1W1Z0 C4-dicarboxylate transport protein [Acidovorax sp. (strain... 36.6 4e-06
B9M9U5 C4-dicarboxylate transport protein [Acidovorax ebreus (str... 36.6 4e-06
>O34578 Probable membrane transporter protein YjnA [Bacillus subtilis
(strain 168)]
Length=254
Score = 165 bits (418), Expect = 2e-53
Identities = 94/261 (36%), Positives = 160/261 (61%), Gaps = 9/261 (3%)
Query 5 LEFILAGVLVGFCVGITGVGGGSLMTPILISLFRIEPHIAIGTDLLYAAISKFCGSMVHA 64
+ IL G+ VG VG+TGVGG +L+TP+LI L I P IA+GTDL+Y +I+K G H
Sbjct 3 VSIILMGLFVGALVGLTGVGGAALLTPLLIVL-GINPSIAVGTDLVYNSITKLFGVASHW 61
Query 65 KKLNIVWPIVIWLAIGSIPASFATSWVLEHYLSQSTHYKAVLTTVLGFMLTLTGVSIIFR 124
++ I + +V +LAIGSIP++ +L + + H + ++ LG++LTL +SII R
Sbjct 62 RQKTINFKLVKYLAIGSIPSASLAIGILHLFPAFHQHQEEIIKHALGYVLTLVAISIIVR 121
Query 125 SRIEKFFMKFRKANSQVETVDINSKNKRLYIVIMGIVLGIFVTLSSVGAGAFGIMALIIM 184
+++ K R Q+ ++ NKR +++G+V G V L+S+G+G+ +A+I +
Sbjct 122 LFLDR---KLRPNRWQLMPLE----NKRALTILIGVVFGFIVGLTSIGSGSLFAIAMIYL 174
Query 185 FPNLPMIRIIGSDVVHAVLLTSVAGLSHMSAGNVDFTLLMWLLIGSIPAIIIGTLISSKM 244
F N+ +I+G+D+ HA LL + AG+ + S G+VD+ L LL+GSIP ++IG+ +S +
Sbjct 175 F-NMKASQIVGTDIAHAFLLVTAAGILNASFGSVDYMLAANLLLGSIPGVLIGSHLSPRF 233
Query 245 PEKLIRKILGVTLFALGINFM 265
+ ++ I+ + G+ +
Sbjct 234 SPRPLQFIMASIILVSGLKLI 254
Score = 18.1 bits (35), Expect = 2.4
Identities = 5/11 (45%), Positives = 10/11 (91%), Gaps = 0/11 (0%)
Query 4 PLEFILAGVLV 14
PL+FI+A +++
Sbjct 237 PLQFIMASIIL 247
>O05493 Probable membrane transporter protein YdhB [Bacillus subtilis
(strain 168)]
Length=245
Score = 83.2 bits (204), Expect = 2e-22
Identities = 68/262 (26%), Positives = 123/262 (47%), Gaps = 31/262 (12%)
Query 8 ILAGVLVGFCVGITGVGGGSLMTPILISLFRIEPHIAIGTDLLYAAISKFCGSMVHAKKL 67
IL L+G +G G GG + +L LF I H A+GT L A + G+ H ++
Sbjct 4 ILVMFLLGIILGFIGAGGAGFVIALLTLLFHIPIHTALGTSLAGMAFTSLSGAYSHYREG 63
Query 68 NIVWPIVI----WLAIGSIPASFATSWV---LEHYLSQSTHYKAVLTTVLGFMLTLTGVS 120
NI I + + A+GS + TS++ L HYL+ ML L+ +
Sbjct 64 NIQMKIGLIVGGFAAVGSFFGAKLTSFIPADLLHYLTAG-------------MLFLSAIL 110
Query 121 IIFRSRIEKFFMKFRKANSQVETVDINSKNKRLYIVIMGIVLGIFVTLSSVGAGAFGIMA 180
I+ R F+ KA T+ ++ VI+GI G+ +G+ F +
Sbjct 111 ILIR-----LFILKEKAQVNQSTLSTYTR-----AVILGIAAGVLSGTFGIGSAPFIQIG 160
Query 181 LIIMFPNLPMIRIIGSDVVHAVLLTSVAGLSHMSAGNVDFTLLMWLLIGSIPAIIIGTLI 240
L+IM NL + +G+ ++ + L G+ +++ G VD+ LL+ +L+G++ +G
Sbjct 161 LMIML-NLSIRHSVGTTMLVIIPLAVGGGIGYITEGFVDYVLLVKVLVGTMCGAYVGAKF 219
Query 241 SSKMPEKLIRKILGVTLFALGI 262
++ MP+ +++ + +T G+
Sbjct 220 TNLMPKVVLKSAIFLTPAIAGL 241
>Q87AD2 Probable membrane transporter protein PD_1894 [Xylella
fastidiosa (strain Temecula1 / ATCC 700964)]
Length=261
Score = 74.3 bits (181), Expect = 5e-19
Identities = 63/257 (25%), Positives = 123/257 (48%), Gaps = 23/257 (9%)
Query 10 AGVLVGFCVGITGVGGGSLMTPILISLFRI-EPHIAIGTDLLYAAISKFCGSMVHAKKLN 68
+G LVGF +G+ G GG L TP+L+ + + PHIAIGT + +++ + + HA K +
Sbjct 12 SGGLVGFALGLLGGGGSILATPLLLYVVGVTNPHIAIGTSAVAVSVNAYANLIAHAWKGH 71
Query 69 IVW-PIVIWLAIGSIPASFATSWVLEHYLSQSTHYKAVLTTVLGFMLTLTGVSIIFRSRI 127
+ W VI+ +G++ A +S + + +L ++G +L L G + R+
Sbjct 72 VWWRSAVIFALVGTLGAFLGSSIGMLIDGQRLLLLFGLLMAMVG-LLMLRGRATAPRAEH 130
Query 128 EKFFMKFRKANSQVETVDINSKNKRLYIVIMGIVLGIFVTLSSVGAGAFGIMALIIMFPN 187
+ ++ S V ++ G G F +G G F I+ +I
Sbjct 131 HQTVLRMCMKTSSVA-------------ILTGAASGFF----GIGGG-FLIVPALIFATR 172
Query 188 LPMIRIIGSDVVHAVLLTSVAGLSHMSAGNVDFTLLMWLLIGSIPAIIIGTLISSKM--P 245
+P I IGS ++ + L++ V++T+ M ++G I +GTL+++++
Sbjct 173 MPTINAIGSSLLAVGSFGLITTLNYARHDLVNWTIAMEFIVGGITGGGLGTLLATRLSAS 232
Query 246 EKLIRKILGVTLFALGI 262
+ L+ ++ G+ + A+ I
Sbjct 233 KHLLNRVFGLIVIAVAI 249
Score = 45.4 bits (106), Expect = 3e-09
Identities = 33/114 (29%), Positives = 52/114 (46%), Gaps = 4/114 (4%)
Query 12 VLVGFCVGITGVGGGSLMTPILISLFRIEPHIAIGTDLLYAAISKFCGSMVHAKKLNIVW 71
+L G G G+GGG L+ P LI R+ AIG+ LL ++ +A+ + W
Sbjct 146 ILTGAASGFFGIGGGFLIVPALIFATRMPTINAIGSSLLAVGSFGLITTLNYARHDLVNW 205
Query 72 PIVIWLAIGSIPASFATSWVLEHYLSQSTHYKAVLTTVLGFMLTLTGVSIIFRS 125
I + +G I +L LS S H +L V G ++ + +I+RS
Sbjct 206 TIAMEFIVGGITGG-GLGTLLATRLSASKH---LLNRVFGLIVIAVAIYVIWRS 255
Score = 17.3 bits (33), Expect = 4.2
Identities = 7/22 (32%), Positives = 10/22 (45%), Gaps = 0/22 (0%)
Query 258 FALGINFMVHPVKAKPVEKPTI 279
F +G F++ P PTI
Sbjct 155 FGIGGGFLIVPALIFATRMPTI 176
>Q9PFB4 Probable membrane transporter protein XF_0764 [Xylella
fastidiosa (strain 9a5c)]
Length=261
Score = 74.3 bits (181), Expect = 5e-19
Identities = 65/257 (25%), Positives = 121/257 (47%), Gaps = 23/257 (9%)
Query 10 AGVLVGFCVGITGVGGGSLMTPILISLFRI-EPHIAIGTDLLYAAISKFCGSMVHAKKLN 68
+G LVGF +G+ G GG L TP+L+ + + PHIAIGT + + + + + HA K +
Sbjct 12 SGGLVGFALGLLGGGGSILATPLLLYVVGVTNPHIAIGTSAVAVSANAYANLIAHAWKGH 71
Query 69 IVW-PIVIWLAIGSIPASFATSWVLEHYLSQSTHYKAVLTTVLGFMLTLTGVSIIFRSRI 127
+ W VI+ +G++ A +S + L L + G ++ + G+ ++ R R
Sbjct 72 VWWRSAVIFALVGTLGAFLGSSIGM---LIDGQR----LLLLFGLLMAMVGL-LMLRGRA 123
Query 128 EKFFMKFRKANSQVETVDINSKNKRLYIVIMGIVLGIFVTLSSVGAGAFGIMALIIMFPN 187
+ Q +TV ++ G G F +G G F I+ +I
Sbjct 124 TAPHAE------QHQTVLRMCMKTSAVAILTGAASGFF----GIGGG-FLIVPALIFATR 172
Query 188 LPMIRIIGSDVVHAVLLTSVAGLSHMSAGNVDFTLLMWLLIGSIPAIIIGTLISSKM--P 245
+P I IGS ++ + L++ VD+T+ M ++G I +GTL++++
Sbjct 173 MPTINAIGSSLLAVGTFGLITTLNYARHDLVDWTIAMEFIVGGITGGGLGTLLATRFSAS 232
Query 246 EKLIRKILGVTLFALGI 262
+ L+ ++ G+ + A+ I
Sbjct 233 KHLLNRVFGLIVIAVAI 249
Score = 44.3 bits (103), Expect = 8e-09
Identities = 32/114 (28%), Positives = 51/114 (45%), Gaps = 4/114 (4%)
Query 12 VLVGFCVGITGVGGGSLMTPILISLFRIEPHIAIGTDLLYAAISKFCGSMVHAKKLNIVW 71
+L G G G+GGG L+ P LI R+ AIG+ LL ++ +A+ + W
Sbjct 146 ILTGAASGFFGIGGGFLIVPALIFATRMPTINAIGSSLLAVGTFGLITTLNYARHDLVDW 205
Query 72 PIVIWLAIGSIPASFATSWVLEHYLSQSTHYKAVLTTVLGFMLTLTGVSIIFRS 125
I + +G I +L S S H +L V G ++ + +I+RS
Sbjct 206 TIAMEFIVGGITGG-GLGTLLATRFSASKH---LLNRVFGLIVIAVAIYVIWRS 255
Score = 17.3 bits (33), Expect = 4.2
Identities = 7/22 (32%), Positives = 10/22 (45%), Gaps = 0/22 (0%)
Query 258 FALGINFMVHPVKAKPVEKPTI 279
F +G F++ P PTI
Sbjct 155 FGIGGGFLIVPALIFATRMPTI 176
>O32134 Probable membrane transporter protein YunE [Bacillus subtilis
(strain 168)]
Length=273
Score = 69.3 bits (168), Expect = 3e-17
Identities = 63/266 (24%), Positives = 123/266 (46%), Gaps = 21/266 (8%)
Query 8 ILAGVLVGFCVGITGVGGGSLMTPILI------SLFR-IEPHIAIGTDLLYAAISKFCGS 60
++ G++ G + G+GGG ++ P L+ LF+ + P +AIGT LL + +
Sbjct 7 VVLGLIAGTVGSLIGLGGGIVIVPSLMFLSTVTQLFQDVTPQVAIGTSLLVIIFTGLSST 66
Query 61 MVHAKKLNIVWPIVIWLAIGSIPASFATSWVLEHYLSQSTHYKAVLTTVLGFMLTLTGVS 120
+ + K + + + IGS P S ++V + + S S + G + L +S
Sbjct 67 LAYIKYKTVDYKSGLIFFIGSGPGSMIGAYVSKLFNSNS------FSVWFGIFMILISLS 120
Query 121 IIFRSRIEKFFMKFRKANSQVETVDINSKNKRLYIVIMGI----VLGIFVTLSSVGAGAF 176
++ +++ K K + D Y +GI V+G L +G G+
Sbjct 121 LMLKAKARP-INKAHKGIIRTFQDDAGEPYTYSYQASVGIAIAFVVGFLGGLFGIGGGSL 179
Query 177 GIMALIIMFPNLPMIRIIGSDVVHAVLLTSVAG-LSHMSAGNVDFTLLMWLLIGSIPAII 235
+ A++++F P + + S + + L+S+ G +SHM +G+V++ + L+ G+
Sbjct 180 MVPAMMLLFLFPPKVAVATS--MFIIFLSSMTGSVSHMISGHVNWLYALALVPGAWFGGK 237
Query 236 IGTLISSKMPEKLIRKILGVTLFALG 261
+G I+ KM K I I+ + L +G
Sbjct 238 LGAAINRKMQTKTIVMIMRIVLILIG 263
Score = 37.7 bits (86), Expect = 1e-06
Identities = 26/128 (20%), Positives = 59/128 (46%), Gaps = 7/128 (5%)
Query 155 IVIMGIVLGIFVTLSSVGAGAFGIMALIIM------FPNLPMIRIIGSDVVHAVLLTSVA 208
+V++G++ G +L +G G + +L+ + F ++ IG+ ++ + +
Sbjct 6 LVVLGLIAGTVGSLIGLGGGIVIVPSLMFLSTVTQLFQDVTPQVAIGTSLLVIIFTGLSS 65
Query 209 GLSHMSAGNVDFTLLMWLLIGSIPAIIIGTLISSKMPEKLIRKILGVTLFALGINFMVHP 268
L+++ VD+ + IGS P +IG +S G+ + + ++ M+
Sbjct 66 TLAYIKYKTVDYKSGLIFFIGSGPGSMIGAYVSKLFNSNSFSVWFGIFMILISLSLML-K 124
Query 269 VKAKPVEK 276
KA+P+ K
Sbjct 125 AKARPINK 132
>Q57883 Probable membrane transporter protein MJ0441 [Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1
/ JCM 10045 / NBRC 100440)]
Length=267
Score = 67.8 bits (164), Expect = 1e-16
Identities = 65/270 (24%), Positives = 117/270 (43%), Gaps = 38/270 (14%)
Query 8 ILAGVLVGFCVGITGVGGGSLMTPILISLFRI-----EPHIAIGTDLLYAAISKFCGSMV 62
I+ G +VG + G+GGG L+ PIL +F A+GT L I+
Sbjct 17 IIVGFIVGILGSLFGIGGGFLVAPILTFIFDYFGIPDGVKFAVGTSLFVVFINSIISIFR 76
Query 63 HAKKLNIVWPIVIWLAIGSIPASFATSWVLEHYLSQSTHYKAVLTTVLGFMLTLTGVSII 122
HAK NI W I + I S+ S+ + +++ +++ A+L + G L + +
Sbjct 77 HAKIKNINWKASITIGIISLVFSYFSGFLVVNFID-----SAILKKLFGIFLIANAIYMA 131
Query 123 FRSRIEKFFMKFRKANSQVETVDINSKNKRLYIVIMGIVLGIFVTLSSVGAGAFGIMALI 182
I+K + ++K ++ G++ G L +G G ++ I
Sbjct 132 KSHHIDKI---------------SDREDKLEPFILCGVITGFLSGLFGIGGGI--VIIPI 174
Query 183 IMFPNLPMIRIIGSDVVHAVLLTSVAGL-SHMSAG------NVDFTLLMWLLIGSIPAII 235
+ P+ R + V + LTS+ GL S+++A N+ + + LI +IP I
Sbjct 175 LAMAKYPVKRAVAIS-VGVIPLTSIGGLISYLTANTEGYIYNIGYVSIPIALIMAIPIIY 233
Query 236 ---IGTLISSKMPEKLIRKILGVTLFALGI 262
+G I+ K+ K +R +L L +G+
Sbjct 234 SSKLGIKINQKISPKHLRIMLSSILGVMGL 263
Score = 38.5 bits (88), Expect = 7e-07
Identities = 27/113 (24%), Positives = 57/113 (50%), Gaps = 6/113 (5%)
Query 7 FILAGVLVGFCVGITGVGGGSLMTPIL-ISLFRIEPHIAIGTDLL----YAAISKFCGSM 61
FIL GV+ GF G+ G+GGG ++ PIL ++ + ++ +AI ++ + + +
Sbjct 149 FILCGVITGFLSGLFGIGGGIVIIPILAMAKYPVKRAVAISVGVIPLTSIGGLISYLTAN 208
Query 62 VHAKKLNIVWPIVIWLAIGSIPASFATSWVLE-HYLSQSTHYKAVLTTVLGFM 113
NI + + I +IP +++ ++ + H + +L+++LG M
Sbjct 209 TEGYIYNIGYVSIPIALIMAIPIIYSSKLGIKINQKISPKHLRIMLSSILGVM 261
Score = 28.9 bits (63), Expect = 9e-04
Identities = 21/113 (19%), Positives = 55/113 (49%), Gaps = 5/113 (4%)
Query 155 IVIMGIVLGIFVTLSSVGAG--AFGIMALIIMFPNLP--MIRIIGSDVVHAVLLTSVAGL 210
++I+G ++GI +L +G G I+ I + +P + +G+ + + + ++
Sbjct 16 LIIVGFIVGILGSLFGIGGGFLVAPILTFIFDYFGIPDGVKFAVGTSLFVVFINSIISIF 75
Query 211 SHMSAGNVDFTLLMWL-LIGSIPAIIIGTLISSKMPEKLIRKILGVTLFALGI 262
H N+++ + + +I + + G L+ + + +++K+ G+ L A I
Sbjct 76 RHAKIKNINWKASITIGIISLVFSYFSGFLVVNFIDSAILKKLFGIFLIANAI 128
Score = 20.0 bits (40), Expect = 0.58
Identities = 17/51 (33%), Positives = 26/51 (51%), Gaps = 17/51 (33%)
Query 219 DFTLLMWLLIGSIPAIIIGTLISSKMPEKLIRKILGVTLFALGINFMVHPV 269
+F LL+ LLI I+G ++ ILG +LF +G F+V P+
Sbjct 8 EFLLLLPLLI------IVGFIVG----------ILG-SLFGIGGGFLVAPI 41
>P44070 Probable membrane transporter protein HI_0902 [Haemophilus
influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)]
Length=264
Score = 49.3 bits (116), Expect = 2e-10
Identities = 60/279 (22%), Positives = 110/279 (39%), Gaps = 44/279 (16%)
Query 8 ILAGVLVGFCVGITGVGGGSLMTPILISLFRIEP-------HIAIGTDLLYAAISKFCGS 60
+L G L GF G+ G+GGG ++ P L+ L I A+GT I+ +
Sbjct 9 LLVGALAGFLAGLFGIGGGLVIVPTLVYLLPIVDVPESLLMSTALGTSFATIVITGIGSA 68
Query 61 MVHAKKLNIVWPIVIWLAIGSIPASFATSWVLEHYLSQSTHYKAVLTTVLGFMLTLTGVS 120
H K NIVW V LA P + ++ ++ + + + + ++
Sbjct 69 QRHHKLGNIVWQAVRILA----PVIMLSVFICGLFIGRLD--REISAKIFACLVVYLATK 122
Query 121 IIFRSRIEKFFMKFRKANSQVETVDINSKNKRLYIVIMGIVLGIFVTLSSVGAGAFGIMA 180
++ + QV T + L VI GI++G+ + + +G G F +
Sbjct 123 MVLSIK-----------KDQVTTKSLTP----LSSVIGGILIGMASSAAGIGGGGFIVPF 167
Query 181 LIIMFPNLPMIRIIGSDVVHAVLLTSVAGLSHMSAGNVDFTLLMWLLIGSI--PAII--- 235
L N+ + IGS +LL ++G+ L+ +G I PA++
Sbjct 168 LTARGINIK--QAIGSSAFCGMLL-GISGMFSFIVSGWGNPLMPEYSLGYIYLPAVLGIT 224
Query 236 --------IGTLISSKMPEKLIRKILGVTLFALGINFMV 266
+G ++K+P ++K + L + IN +
Sbjct 225 ATSFFTSKLGASATAKLPVSTLKKGFALFLIVVAINMFL 263
Score = 33.9 bits (76), Expect = 2e-05
Identities = 37/129 (29%), Positives = 56/129 (43%), Gaps = 19/129 (15%)
Query 4 PLEFILAGVLVGFCVGITGVGGGSLMTPILISLFRIEPHIAIGTDLLYAAISKFCGSMVH 63
PL ++ G+L+G G+GGG + P L + I AIG+ S FCG ++
Sbjct 139 PLSSVIGGILIGMASSAAGIGGGGFIVPFLTAR-GINIKQAIGS-------SAFCGMLLG 190
Query 64 AKKLNIV----W--PIVIWLAIGSI--PASF---ATSWVLEHYLSQSTHYKAVLTTVLGF 112
+ W P++ ++G I PA ATS+ + +T V T GF
Sbjct 191 ISGMFSFIVSGWGNPLMPEYSLGYIYLPAVLGITATSFFTSKLGASATAKLPVSTLKKGF 250
Query 113 MLTLTGVSI 121
L L V+I
Sbjct 251 ALFLIVVAI 259
>Q7NEY9 Phospho-N-acetylmuramoyl-pentapeptide-transferase [Gloeobacter
violaceus (strain ATCC 29082 / PCC 7421)]
Length=350
Score = 37.4 bits (85), Expect = 2e-06
Identities = 34/125 (27%), Positives = 57/125 (46%), Gaps = 24/125 (19%)
Query 146 INSKNKRLYIVIMGIVLGIFVTLSSVGAGAFGIMALIIMFPNLPMIRIIGSDVVHAVLLT 205
I + K L ++ G+ +F LS G FG+ L I+F L ++ + G+ +AV +T
Sbjct 133 ITPRQKMLLLIGAGVAFCLFHGLSGHGTATFGLGELGILFWPLALLALTGT--ANAVNIT 190
Query 206 SVAGLSHMSAGNVDFTLLMWLLIGSIPAIIIGTLISSKMPEKLIRKILGVTLFALG---I 262
GL ++ G G+I A ++G ++ + P L V FAL +
Sbjct 191 D--GLDGLAGGT-----------GAIAATVLGLIVIATHP------ALAVLCFALAGACL 231
Query 263 NFMVH 267
F+VH
Sbjct 232 GFLVH 236
Score = 17.7 bits (34), Expect = 3.3
Identities = 7/12 (58%), Positives = 8/12 (67%), Gaps = 0/12 (0%)
Query 7 FILAGVLVGFCV 18
F LAG +GF V
Sbjct 224 FALAGACLGFLV 235
>A1W1Z0 C4-dicarboxylate transport protein [Acidovorax sp. (strain
JS42)]
Length=450
Score = 36.6 bits (83), Expect = 4e-06
Identities = 23/93 (25%), Positives = 49/93 (53%), Gaps = 8/93 (9%)
Query 153 LYIVIMGIVLGIFVTLSSVGAGAFGIMALIIMFPNLPMIRIIGSDVVHAVLLTSVAGLSH 212
++ +I+G++LG F FG + +I++I + V+ ++T +A +SH
Sbjct 26 VFAIIIGVLLGHFQPEYGAAMKPFGDAF-------IKLIKMIIAPVIFLTIVTGIASMSH 78
Query 213 MSA-GNVDFTLLMWLLIGSIPAIIIGTLISSKM 244
+SA G V + + L S A+++G ++++ M
Sbjct 79 LSAVGRVFGKAMAYFLTFSTLALVVGLVVANVM 111
Score = 20.0 bits (40), Expect = 0.63
Identities = 17/51 (33%), Positives = 21/51 (41%), Gaps = 16/51 (31%)
Query 233 AIIIGTLISSKMPE-------------KLIRKILGVTLF---ALGINFMVH 267
AIIIG L+ PE KLI+ I+ +F GI M H
Sbjct 28 AIIIGVLLGHFQPEYGAAMKPFGDAFIKLIKMIIAPVIFLTIVTGIASMSH 78
Score = 16.5 bits (31), Expect = 7.8
Identities = 9/40 (23%), Positives = 20/40 (50%), Gaps = 0/40 (0%)
Query 160 IVLGIFVTLSSVGAGAFGIMALIIMFPNLPMIRIIGSDVV 199
+VL ++T + G +A F L +IR + ++++
Sbjct 234 LVLTFYITSAVFVLVVLGAVARACGFSVLKLIRYLKAELL 273
>B9M9U5 C4-dicarboxylate transport protein [Acidovorax ebreus
(strain TPSY)]
Length=450
Score = 36.6 bits (83), Expect = 4e-06
Identities = 23/93 (25%), Positives = 49/93 (53%), Gaps = 8/93 (9%)
Query 153 LYIVIMGIVLGIFVTLSSVGAGAFGIMALIIMFPNLPMIRIIGSDVVHAVLLTSVAGLSH 212
++ +I+G++LG F FG + +I++I + V+ ++T +A +SH
Sbjct 26 VFAIIIGVLLGHFQPEYGAAMKPFGDAF-------IKLIKMIIAPVIFLTIVTGIASMSH 78
Query 213 MSA-GNVDFTLLMWLLIGSIPAIIIGTLISSKM 244
+SA G V + + L S A+++G ++++ M
Sbjct 79 LSAVGRVFGKAMAYFLTFSTLALVVGLVVANVM 111
Score = 20.0 bits (40), Expect = 0.63
Identities = 17/51 (33%), Positives = 21/51 (41%), Gaps = 16/51 (31%)
Query 233 AIIIGTLISSKMPE-------------KLIRKILGVTLF---ALGINFMVH 267
AIIIG L+ PE KLI+ I+ +F GI M H
Sbjct 28 AIIIGVLLGHFQPEYGAAMKPFGDAFIKLIKMIIAPVIFLTIVTGIASMSH 78
Score = 16.5 bits (31), Expect = 7.8
Identities = 9/40 (23%), Positives = 20/40 (50%), Gaps = 0/40 (0%)
Query 160 IVLGIFVTLSSVGAGAFGIMALIIMFPNLPMIRIIGSDVV 199
+VL ++T + G +A F L +IR + ++++
Sbjct 234 LVLTFYITSAVFVLVVLGAVARACGFSVLKLIRYLKAELL 273
Lambda K H a alpha
0.329 0.143 0.425 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 663750
Database: d03010d434161957aa5a3cb611c74e5d.SwissProt.fasta
Posted date: May 31, 2024 11:20 PM
Number of letters in database: 3,075
Number of sequences in database: 10
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
