BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 8d4e2f98e0934576f86a17ffdbc5e3e7.SwissProt.fasta
22 sequences; 8,525 total letters
Query= ACIAD2331
Length=510
Score E
Sequences producing significant alignments: (Bits) Value
P0AEC0 UPF0053 inner membrane protein YoaE [Escherichia coli (str... 566 0.0
P0AEC1 UPF0053 inner membrane protein YoaE [Escherichia coli O6:H... 566 0.0
P0AEC2 UPF0053 inner membrane protein YoaE [Escherichia coli O157... 566 0.0
Q89AI6 UPF0053 protein bbp_300 [Buchnera aphidicola subsp. Baizon... 506 1e-179
Q8K9M0 UPF0053 protein BUsg_314 [Buchnera aphidicola subsp. Schiz... 501 1e-177
P57408 UPF0053 protein BU323 [Buchnera aphidicola subsp. Acyrthos... 501 2e-177
P76389 UPF0053 protein YegH [Escherichia coli (strain K12)] 406 3e-140
Q83KI8 UPF0053 protein YegH [Shigella flexneri] 405 6e-140
P67127 UPF0053 inner membrane protein YgdQ [Escherichia coli (str... 231 5e-76
P67128 UPF0053 inner membrane protein YgdQ [Escherichia coli O6:H... 231 5e-76
P67129 UPF0053 inner membrane protein YgdQ [Escherichia coli O157... 231 5e-76
P43932 UPF0053 protein HI_0056 [Haemophilus influenzae (strain AT... 227 1e-74
Q48446 Uncharacterized 18.9 kDa protein in cps region [Klebsiella... 206 2e-67
Q48445 UPF0053 protein in cps region [Klebsiella pneumoniae] 156 1e-46
O05961 Hemolysin C [Rickettsia prowazekii (strain Madrid E)] 90.9 2e-23
Q68W10 Hemolysin C [Rickettsia typhi (strain ATCC VR-144 / Wilmin... 88.6 2e-22
P0A2L3 Magnesium and cobalt efflux protein CorC [Salmonella typhi... 85.9 1e-21
P0AE45 Polyamine export protein [Escherichia coli (strain K12)] 87.0 2e-21
A0A0F6BAS6 Polyamine export protein [Salmonella typhimurium (stra... 86.3 4e-21
P54428 UPF0053 protein YrkA [Bacillus subtilis (strain 168)] 74.3 2e-17
Q54318 Hemolysin C [Brachyspira hyodysenteriae] 72.4 3e-17
P37908 UPF0053 inner membrane protein YfjD [Escherichia coli (str... 67.4 4e-15
>P0AEC0 UPF0053 inner membrane protein YoaE [Escherichia coli
(strain K12)]
Length=518
Score = 566 bits (1459), Expect = 0.0
Identities = 290/511 (57%), Positives = 385/511 (75%), Gaps = 9/511 (2%)
Query 1 MEFLLDPGIWVGLLTLIVLEIVLGIDNLVFIAILADKLPPEQRDKARIIGLSLALVMRLA 60
MEFL+DP IW GLLTL+VLEIVLGIDNLVFIAILADKLPP+QRDKAR++GLSLAL+MRL
Sbjct 1 MEFLMDPSIWAGLLTLVVLEIVLGIDNLVFIAILADKLPPKQRDKARLLGLSLALIMRLG 60
Query 61 LLSVISWLVTLTKPLIQVADYSFSGRDLILLFGGLFLVYKAVTELHEKLEGQPEIKTNSS 120
LLS+ISW+VTLTKPL V D+SFSGRDLI+LFGG+FL++KA TELHE+LE + +
Sbjct 61 LLSLISWMVTLTKPLFTVMDFSFSGRDLIMLFGGIFLLFKATTELHERLENRDH-DSGHG 119
Query 121 VAYASFWAVVTQIIVLDAVFSLDSVITAIGMVDNIYVMMTAVVIAVMVMLIASKPLTAFV 180
YASFW VVTQI++LDAVFSLD+VITA+GMV+++ VMM AVVIA+ VML+ASKPLT FV
Sbjct 120 KGYASFWVVVTQIVILDAVFSLDAVITAVGMVNHLPVMMAAVVIAMAVMLLASKPLTRFV 179
Query 181 NRHPTVVILCLSFLLLIGISLIAEGFGFHIPKGYIYSGIGVAILIEAFNQFSQRNVAKHQ 240
N+HPTVV+LCLSFLL+IG+SL+AEGFGFHIPKGY+Y+ IG +I+IE FNQ ++RN +HQ
Sbjct 180 NQHPTVVVLCLSFLLMIGLSLVAEGFGFHIPKGYLYAAIGFSIIIEVFNQIARRNFIRHQ 239
Query 241 AKIPLRHRTANAIFKLIGEKDEIR------SPVDQKESDGLFVAEERYMIGGVLTLAERS 294
+ +PLR RTA+AI +L+G K + +P+ +G F EERYMI GVLTLA RS
Sbjct 240 STLPLRARTADAILRLMGGKRQANVQHDADNPMPMPIPEGAFAEEERYMINGVLTLASRS 299
Query 295 VASIMTPRTQISWVNIEQDPETIRQQVLAVPHSLFPVCRGSLDKVITIARAKDLIDALDH 354
+ IMTPR +ISWV+ + IR+Q+L+ PHSLFPVCRG LD++I I RAK+L+ AL+
Sbjct 300 LRGIMTPRGEISWVDANLGVDEIREQLLSSPHSLFPVCRGELDEIIGIVRAKELLVALEE 359
Query 355 PDELSGVLKRQRPIFIFEKMKVIDAINTLRSSKGSLVLVSDEFGVVQGLISPLDVFEAIA 414
+++ + I + E + I+ + LR ++GS V+V++EFGVVQGL++PLDV EAIA
Sbjct 360 GVDVAAIASASPAIIVPETLDPINLLGVLRRARGSFVIVTNEFGVVQGLVTPLDVLEAIA 419
Query 415 GEFPDADEQMDLVKVGERTWHANGLLDLYQLELELGMIELMSDHADYISVAGLIMDKTNA 474
GEFPDADE +++ G+ W G DL+ L+ L +E ++D D +VAGL++
Sbjct 420 GEFPDADETPEIITDGD-GWLVKGGTDLHALQQALD-VEHLADDDDIATVAGLVISANGH 477
Query 475 EVKIGTSVFHEDIYFEVIEMDGNRIKMVKIV 505
++G + ++ +IE + R+ +V+IV
Sbjct 478 IPRVGDVIDVGPLHITIIEANDYRVDLVRIV 508
>P0AEC1 UPF0053 inner membrane protein YoaE [Escherichia coli
O6:H1 (strain CFT073 / ATCC 700928 / UPEC)]
Length=518
Score = 566 bits (1459), Expect = 0.0
Identities = 290/511 (57%), Positives = 385/511 (75%), Gaps = 9/511 (2%)
Query 1 MEFLLDPGIWVGLLTLIVLEIVLGIDNLVFIAILADKLPPEQRDKARIIGLSLALVMRLA 60
MEFL+DP IW GLLTL+VLEIVLGIDNLVFIAILADKLPP+QRDKAR++GLSLAL+MRL
Sbjct 1 MEFLMDPSIWAGLLTLVVLEIVLGIDNLVFIAILADKLPPKQRDKARLLGLSLALIMRLG 60
Query 61 LLSVISWLVTLTKPLIQVADYSFSGRDLILLFGGLFLVYKAVTELHEKLEGQPEIKTNSS 120
LLS+ISW+VTLTKPL V D+SFSGRDLI+LFGG+FL++KA TELHE+LE + +
Sbjct 61 LLSLISWMVTLTKPLFTVMDFSFSGRDLIMLFGGIFLLFKATTELHERLENRDH-DSGHG 119
Query 121 VAYASFWAVVTQIIVLDAVFSLDSVITAIGMVDNIYVMMTAVVIAVMVMLIASKPLTAFV 180
YASFW VVTQI++LDAVFSLD+VITA+GMV+++ VMM AVVIA+ VML+ASKPLT FV
Sbjct 120 KGYASFWVVVTQIVILDAVFSLDAVITAVGMVNHLPVMMAAVVIAMAVMLLASKPLTRFV 179
Query 181 NRHPTVVILCLSFLLLIGISLIAEGFGFHIPKGYIYSGIGVAILIEAFNQFSQRNVAKHQ 240
N+HPTVV+LCLSFLL+IG+SL+AEGFGFHIPKGY+Y+ IG +I+IE FNQ ++RN +HQ
Sbjct 180 NQHPTVVVLCLSFLLMIGLSLVAEGFGFHIPKGYLYAAIGFSIIIEVFNQIARRNFIRHQ 239
Query 241 AKIPLRHRTANAIFKLIGEKDEIR------SPVDQKESDGLFVAEERYMIGGVLTLAERS 294
+ +PLR RTA+AI +L+G K + +P+ +G F EERYMI GVLTLA RS
Sbjct 240 STLPLRARTADAILRLMGGKRQANVQHDADNPMPMPIPEGAFAEEERYMINGVLTLASRS 299
Query 295 VASIMTPRTQISWVNIEQDPETIRQQVLAVPHSLFPVCRGSLDKVITIARAKDLIDALDH 354
+ IMTPR +ISWV+ + IR+Q+L+ PHSLFPVCRG LD++I I RAK+L+ AL+
Sbjct 300 LRGIMTPRGEISWVDANLGVDEIREQLLSSPHSLFPVCRGELDEIIGIVRAKELLVALEE 359
Query 355 PDELSGVLKRQRPIFIFEKMKVIDAINTLRSSKGSLVLVSDEFGVVQGLISPLDVFEAIA 414
+++ + I + E + I+ + LR ++GS V+V++EFGVVQGL++PLDV EAIA
Sbjct 360 GVDVAAIASASPAIIVPETLDPINLLGVLRRARGSFVIVTNEFGVVQGLVTPLDVLEAIA 419
Query 415 GEFPDADEQMDLVKVGERTWHANGLLDLYQLELELGMIELMSDHADYISVAGLIMDKTNA 474
GEFPDADE +++ G+ W G DL+ L+ L +E ++D D +VAGL++
Sbjct 420 GEFPDADETPEIITDGD-GWLVKGGTDLHALQQALD-VEHLADDDDIATVAGLVISANGH 477
Query 475 EVKIGTSVFHEDIYFEVIEMDGNRIKMVKIV 505
++G + ++ +IE + R+ +V+IV
Sbjct 478 IPRVGDVIDVGPLHITIIEANDYRVDLVRIV 508
>P0AEC2 UPF0053 inner membrane protein YoaE [Escherichia coli
O157:H7]
Length=518
Score = 566 bits (1459), Expect = 0.0
Identities = 290/511 (57%), Positives = 385/511 (75%), Gaps = 9/511 (2%)
Query 1 MEFLLDPGIWVGLLTLIVLEIVLGIDNLVFIAILADKLPPEQRDKARIIGLSLALVMRLA 60
MEFL+DP IW GLLTL+VLEIVLGIDNLVFIAILADKLPP+QRDKAR++GLSLAL+MRL
Sbjct 1 MEFLMDPSIWAGLLTLVVLEIVLGIDNLVFIAILADKLPPKQRDKARLLGLSLALIMRLG 60
Query 61 LLSVISWLVTLTKPLIQVADYSFSGRDLILLFGGLFLVYKAVTELHEKLEGQPEIKTNSS 120
LLS+ISW+VTLTKPL V D+SFSGRDLI+LFGG+FL++KA TELHE+LE + +
Sbjct 61 LLSLISWMVTLTKPLFTVMDFSFSGRDLIMLFGGIFLLFKATTELHERLENRDH-DSGHG 119
Query 121 VAYASFWAVVTQIIVLDAVFSLDSVITAIGMVDNIYVMMTAVVIAVMVMLIASKPLTAFV 180
YASFW VVTQI++LDAVFSLD+VITA+GMV+++ VMM AVVIA+ VML+ASKPLT FV
Sbjct 120 KGYASFWVVVTQIVILDAVFSLDAVITAVGMVNHLPVMMAAVVIAMAVMLLASKPLTRFV 179
Query 181 NRHPTVVILCLSFLLLIGISLIAEGFGFHIPKGYIYSGIGVAILIEAFNQFSQRNVAKHQ 240
N+HPTVV+LCLSFLL+IG+SL+AEGFGFHIPKGY+Y+ IG +I+IE FNQ ++RN +HQ
Sbjct 180 NQHPTVVVLCLSFLLMIGLSLVAEGFGFHIPKGYLYAAIGFSIIIEVFNQIARRNFIRHQ 239
Query 241 AKIPLRHRTANAIFKLIGEKDEIR------SPVDQKESDGLFVAEERYMIGGVLTLAERS 294
+ +PLR RTA+AI +L+G K + +P+ +G F EERYMI GVLTLA RS
Sbjct 240 STLPLRARTADAILRLMGGKRQANVQHDADNPMPMPIPEGAFAEEERYMINGVLTLASRS 299
Query 295 VASIMTPRTQISWVNIEQDPETIRQQVLAVPHSLFPVCRGSLDKVITIARAKDLIDALDH 354
+ IMTPR +ISWV+ + IR+Q+L+ PHSLFPVCRG LD++I I RAK+L+ AL+
Sbjct 300 LRGIMTPRGEISWVDANLGVDEIREQLLSSPHSLFPVCRGELDEIIGIVRAKELLVALEE 359
Query 355 PDELSGVLKRQRPIFIFEKMKVIDAINTLRSSKGSLVLVSDEFGVVQGLISPLDVFEAIA 414
+++ + I + E + I+ + LR ++GS V+V++EFGVVQGL++PLDV EAIA
Sbjct 360 GVDVAAIASASPAIIVPETLDPINLLGVLRRARGSFVIVTNEFGVVQGLVTPLDVLEAIA 419
Query 415 GEFPDADEQMDLVKVGERTWHANGLLDLYQLELELGMIELMSDHADYISVAGLIMDKTNA 474
GEFPDADE +++ G+ W G DL+ L+ L +E ++D D +VAGL++
Sbjct 420 GEFPDADETPEIITDGD-GWLVKGGTDLHALQQALD-VEHLADDDDIATVAGLVISANGH 477
Query 475 EVKIGTSVFHEDIYFEVIEMDGNRIKMVKIV 505
++G + ++ +IE + R+ +V+IV
Sbjct 478 IPRVGDVIDVGPLHITIIEANDYRVDLVRIV 508
>Q89AI6 UPF0053 protein bbp_300 [Buchnera aphidicola subsp. Baizongia
pistaciae (strain Bp)]
Length=519
Score = 506 bits (1303), Expect = 1e-179
Identities = 267/520 (51%), Positives = 362/520 (70%), Gaps = 21/520 (4%)
Query 1 MEFLLDPGIWVGLLTLIVLEIVLGIDNLVFIAILADKLPPEQRDKARIIGLSLALVMRLA 60
ME LDP W GLLTLI+LEIVLGIDNLVF+AIL++KLPP ++DKAR+IGLS AL MRL
Sbjct 1 MELFLDPSTWAGLLTLIILEIVLGIDNLVFVAILSEKLPPCKQDKARLIGLSFALFMRLG 60
Query 61 LLSVISWLVTLTKPLIQVADYSFSGRDLILLFGGLFLVYKAVTELHEKLEGQPEIKTNSS 120
LL+++SW+VTLT +I +SFSGRDLILLFGGLFL++KA ELHE+L+ + K ++
Sbjct 61 LLALMSWMVTLTSEIISNKYFSFSGRDLILLFGGLFLLFKATIELHERLDNDIQ-KNENN 119
Query 121 VAYASFWAVVTQIIVLDAVFSLDSVITAIGMVDNIYVMMTAVVIAVMVMLIASKPLTAFV 180
YA FW +V QI++LD++FSLD++ITA+G ++N+ +MM AVVIA+++MLIASKPLT F+
Sbjct 120 KHYAGFWTIVIQIVILDSIFSLDAIITAVGTINNLPIMMIAVVIAMVLMLIASKPLTKFI 179
Query 181 NRHPTVVILCLSFLLLIGISLIAEGFGFHIPKGYIYSGIGVAILIEAFNQFSQRNVAKHQ 240
N H TVV+LCLSFLL+IG +L++E GF++PKGY+Y+ IG +I+IE FNQ ++RN HQ
Sbjct 180 NLHQTVVVLCLSFLLMIGCNLVSEALGFYVPKGYLYAAIGFSIIIEIFNQIARRNFMLHQ 239
Query 241 AKIPLRHRTANAIFKLI----------------GEKDEIRSPVDQKESDGLFVAEERYMI 284
++ P+R R A AI +L+ +K++IR+ ES F EERYMI
Sbjct 240 SRRPMRQRAAEAILRLMIGDQFRNTTTNISTKNKDKEKIRNRTTDTES---FKEEERYMI 296
Query 285 GGVLTLAERSVASIMTPRTQISWVNIEQDPETIRQQVLAVPHSLFPVCRGSLDKVITIAR 344
GVLTLA RS+ SIMTPR +ISWVNI Q IR Q+L PHSLFPVC+G LD+VI I R
Sbjct 297 NGVLTLAARSIRSIMTPRNEISWVNIYQPKNKIRSQLLDTPHSLFPVCKGQLDEVIGIVR 356
Query 345 AKDLIDALDHPDELSGVLKRQRPIFIFEKMKVIDAINTLRSSKGSLVLVSDEFGVVQGLI 404
AK+L+ AL+ + PI I + + I+ + LR +KGSLV+V++EFG VQGLI
Sbjct 357 AKELLVALERTINIIDFSSTTLPIIIPDTLDPINLLGVLRRAKGSLVIVTNEFGAVQGLI 416
Query 405 SPLDVFEAIAGEFPDADEQMDLVKVGERTWHANGLLDLYQLELELGMIELMSDHADYISV 464
+PLDV EAIAGEFPDADE D++ + +W G DL+ L+ L + L+ Y S+
Sbjct 417 TPLDVLEAIAGEFPDADETPDII-FEKDSWLVKGGTDLHSLQQCLNITNLIKQENSYASL 475
Query 465 AGLIMDKTNAEVKIGTSVFHEDIYFEVIEMDGNRIKMVKI 504
AGL++ + G ++ + F ++E RI +V+I
Sbjct 476 AGLLIAQKGQLPLPGETIVIPPLRFYILEATQYRINLVRI 515
>Q8K9M0 UPF0053 protein BUsg_314 [Buchnera aphidicola subsp. Schizaphis
graminum (strain Sg)]
Length=515
Score = 501 bits (1290), Expect = 1e-177
Identities = 273/515 (53%), Positives = 362/515 (70%), Gaps = 14/515 (3%)
Query 1 MEFLLDPGIWVGLLTLIVLEIVLGIDNLVFIAILADKLPPEQRDKARIIGLSLALVMRLA 60
MEF LDP IW GLLTL+VLE+VLGIDNL+F+AIL++KLPP QRDKAR+IGL LAL+MRLA
Sbjct 1 MEFFLDPSIWAGLLTLVVLEVVLGIDNLIFVAILSEKLPPNQRDKARLIGLGLALIMRLA 60
Query 61 LLSVISWLVTLTKPLIQVADYSFSGRDLILLFGGLFLVYKAVTELHEKLEGQPEIKTNSS 120
LLS+ISW+VTLT P+I +S S RDLILL GGLFL++KA ELHE+LE + T +
Sbjct 61 LLSLISWVVTLTSPIISNNFFSLSIRDLILLIGGLFLLFKATIELHERLENEDHENTENK 120
Query 121 VAYASFWAVVTQIIVLDAVFSLDSVITAIGMVDNIYVMMTAVVIAVMVMLIASKPLTAFV 180
YASFWAVV QI+VLDAVFSLD++ITA+GMV+ + +MM AVV+A ++ML+ASK LT F+
Sbjct 121 -NYASFWAVVIQIVVLDAVFSLDAIITAVGMVNQLLIMMIAVVLATILMLLASKALTNFI 179
Query 181 NRHPTVVILCLSFLLLIGISLIAEGFGFHIPKGYIYSGIGVAILIEAFNQFSQRNVAKHQ 240
N H TVV+LCLSFLL+IG SL+AE F+IPKGY+Y+ IG +ILIE FNQ ++ N K+Q
Sbjct 180 NIHQTVVVLCLSFLLMIGFSLVAEALKFYIPKGYLYAAIGFSILIEIFNQIARHNFMKNQ 239
Query 241 AKIPLRHRTANAIFKL-IGEKDEIRSPV--DQKESDGL--------FVAEERYMIGGVLT 289
++ P+R R A AI +L I EK+ ++ + D K L F EE+YMI GVLT
Sbjct 240 SRKPMRQRAAEAILRLMIREKNNNKNRIKTDNKAEIVLSSSLETETFKDEEKYMINGVLT 299
Query 290 LAERSVASIMTPRTQISWVNIEQDPETIRQQVLAVPHSLFPVCRGSLDKVITIARAKDLI 349
LA RS+ SIMTPR+ ISWVN E+ IR Q+L PH+LFPVC+G LD++I I RAK+L+
Sbjct 300 LAGRSIKSIMTPRSNISWVNTEKTINEIRLQLLDTPHNLFPVCKGELDEIIGIVRAKELL 359
Query 350 DALDHPDELSGVLKRQRPIFIFEKMKVIDAINTLRSSKGSLVLVSDEFGVVQGLISPLDV 409
A++ ++ + PI I + + I+ + LR ++GS V+VS+EFGVVQGLI+PLDV
Sbjct 360 VAIEKNIDVYTFASQIPPIIIPDTLDPINLLGVLRRAQGSFVIVSNEFGVVQGLITPLDV 419
Query 410 FEAIAGEFPDADEQMDLVKVGERTWHANGLLDLYQLELELGMIELMSDHADYISVAGLIM 469
EAIAGEFPDADE D++K + +W G DL+ L+ L EL+ D S+ GL++
Sbjct 420 LEAIAGEFPDADETPDIIK-EQNSWLVKGETDLHSLQQLLNTKELIKQD-DCASLGGLLI 477
Query 470 DKTNAEVKIGTSVFHEDIYFEVIEMDGNRIKMVKI 504
+ G ++ F ++ RI +V+I
Sbjct 478 SQKGQLPLPGETIKINSFSFHIVNATEYRIDLVRI 512
>P57408 UPF0053 protein BU323 [Buchnera aphidicola subsp. Acyrthosiphon
pisum (strain APS)]
Length=521
Score = 501 bits (1289), Expect = 2e-177
Identities = 266/518 (51%), Positives = 363/518 (70%), Gaps = 16/518 (3%)
Query 1 MEFLLDPGIWVGLLTLIVLEIVLGIDNLVFIAILADKLPPEQRDKARIIGLSLALVMRLA 60
MEF LDP W GLLTL++LE+VLGIDNL+F+AIL++KLPP QRDKAR+IGL LALVMRLA
Sbjct 1 MEFFLDPSTWAGLLTLVILEVVLGIDNLIFVAILSEKLPPNQRDKARLIGLGLALVMRLA 60
Query 61 LLSVISWLVTLTKPLIQVADYSFSGRDLILLFGGLFLVYKAVTELHEKLEGQPEIKTNSS 120
LLS+ISW+VTL P++ +S S RD+ILLFGG FL++K ELHE+LE + + +
Sbjct 61 LLSLISWIVTLNSPIVHNKFFSLSIRDIILLFGGFFLLFKTTMELHERLENNHH-ENSEN 119
Query 121 VAYASFWAVVTQIIVLDAVFSLDSVITAIGMVDNIYVMMTAVVIAVMVMLIASKPLTAFV 180
YA FWAVV QI+VLDAVFSLD++ITA+GMV+ + +MM AV++A +ML+ASK LT F+
Sbjct 120 KNYAGFWAVVIQIVVLDAVFSLDAIITAVGMVNQLLIMMIAVILATFLMLLASKALTNFI 179
Query 181 NRHPTVVILCLSFLLLIGISLIAEGFGFHIPKGYIYSGIGVAILIEAFNQFSQRNVAKHQ 240
N H TVV+LCLSFLL+IG SL+ E F IPKGY+Y+ IG +ILIE FNQ ++ N K+Q
Sbjct 180 NLHQTVVVLCLSFLLMIGFSLVTEALRFCIPKGYLYAAIGFSILIEIFNQIARHNFMKNQ 239
Query 241 AKIPLRHRTANAIFKL-IGE---KDEIRS-PVDQKESDGL--------FVAEERYMIGGV 287
++ P+R R A AI +L +GE K +I+ ++ +++D + F EERYMI GV
Sbjct 240 SRRPMRQRAAEAILRLMVGEQNKKQQIKKIEINSQKTDSIQSSKEMETFKDEERYMINGV 299
Query 288 LTLAERSVASIMTPRTQISWVNIEQDPETIRQQVLAVPHSLFPVCRGSLDKVITIARAKD 347
LTLA RS+ SIMTPR+ ISWVN E++ + IR Q+L PHSLFPVC+G LD++I I RAK+
Sbjct 300 LTLAGRSIRSIMTPRSNISWVNTEKNTDEIRMQLLDTPHSLFPVCKGELDEIIGIVRAKE 359
Query 348 LIDALDHPDELSGVLKRQRPIFIFEKMKVIDAINTLRSSKGSLVLVSDEFGVVQGLISPL 407
L+ A++ + S + PI I + + I + LR ++GS V+VS+EFGVVQGLI+PL
Sbjct 360 LLVAIEKKIDASTFSSKILPIIIPDTLDPIKLLGVLRRAQGSFVIVSNEFGVVQGLITPL 419
Query 408 DVFEAIAGEFPDADEQMDLVKVGERTWHANGLLDLYQLELELGMIELMSDHADYISVAGL 467
DV EAIAGEFPDADE D+++ +W G DL+ L+ L EL+ + +Y S+ GL
Sbjct 420 DVLEAIAGEFPDADETPDIIQ-ENNSWLVKGETDLHSLQQLLNTEELIKED-NYASLGGL 477
Query 468 IMDKTNAEVKIGTSVFHEDIYFEVIEMDGNRIKMVKIV 505
++ + G + YF +++ RI +V+I+
Sbjct 478 LIAQKGQLPIPGEIIHIHPFYFHIVKATEYRIDLVRII 515
>P76389 UPF0053 protein YegH [Escherichia coli (strain K12)]
Length=527
Score = 406 bits (1043), Expect = 3e-140
Identities = 231/518 (45%), Positives = 334/518 (64%), Gaps = 16/518 (3%)
Query 1 MEFLLDPGIWVGLLTLIVLEIVLGIDNLVFIAILADKLPPEQRDKARIIGLSLALVMRLA 60
ME++ DP IW GL+TLIV+E+VLGIDNLVFIAILA+KLPP+QRD+AR+ GL LA++MRL
Sbjct 1 MEWIADPSIWAGLITLIVIELVLGIDNLVFIAILAEKLPPKQRDRARVTGLLLAMLMRLL 60
Query 61 LLSVISWLVTLTKPLIQVADYSFSGRDLILLFGGLFLVYKAVTELHEKLEGQPEIKTNSS 120
LL+ ISWLVTLT+PL ++FS RDLI+LFGG FL++KA EL+E+LEG+
Sbjct 61 LLASISWLVTLTQPLFSFRSFTFSARDLIMLFGGFFLLFKATMELNERLEGKDSNNPTQR 120
Query 121 VAYASFWAVVTQIIVLDAVFSLDSVITAIGMVDNIYVMMTAVVIAVMVMLIASKPLTAFV 180
A FW VVTQI+VLDA+FSLDSVITA+GMVD++ VMM AVVIA+ +ML+ASKPLT FV
Sbjct 121 KG-AKFWGVVTQIVVLDAIFSLDSVITAVGMVDHLLVMMAAVVIAISLMLMASKPLTQFV 179
Query 181 NRHPTVVILCLSFLLLIGISLIAEGFGFHIPKGYIYSGIGVAILIEAFNQFSQRNVAKH- 239
N HPT+VILCLSFLL+IG SL+AEGFGF IPKGY+Y+ IG +++IEA NQ + N +
Sbjct 180 NSHPTIVILCLSFLLMIGFSLVAEGFGFVIPKGYLYAAIGFSVMIEALNQLAIFNRRRFL 239
Query 240 QAKIPLRHRTANAIFKLI-GEKD------EIRSPVDQKESDGLFVAEERYMIGGVLTLAE 292
A LR RT A+ +L+ G+K+ E S + + +F +ER MI VL L +
Sbjct 240 SANQTLRQRTTEAVMRLLSGQKEDAELDAETASMLVDHGNQQIFNPQERRMIERVLNLNQ 299
Query 293 RSVASIMTPRTQISWVNIEQDPETIRQQVLAVPHSLFPVCRG-SLDKVITIARAKDLIDA 351
R+V+SIMT R I +++ E IRQ + H+ V G + ++ + DL+
Sbjct 300 RTVSSIMTSRHDIEHIDLNAPEEEIRQLLERNQHTRLVVTDGDDAEDLLGVVHVIDLLQQ 359
Query 352 LDHPDELSGVLKRQRPIFIFEKMKVIDAINTLRSSKGSLVLVSDEFGVVQGLISPLDVFE 411
+ L+ + ++P+ E + ++ A+ R+++ V DEFG V+G+++ DV E
Sbjct 360 SLRGEPLNLRVLIRQPLVFPETLPLLPALEQFRNARTHFAFVVDEFGSVEGIVTLSDVTE 419
Query 412 AIAGEFP----DADEQMDLVKVGERTWHANGLLDLYQLELELGMIELMSDHADYISVAGL 467
IAG P + D + D+ K + +W ANG + L L + + + + +Y ++AGL
Sbjct 420 TIAGNLPNEVEEIDARHDIQKNADGSWTANGHMPLEDLVQYVPL--PLDEKREYHTIAGL 477
Query 468 IMDKTNAEVKIGTSVFHEDIYFEVIEMDGNRIKMVKIV 505
+M+ K G V D + ++++ +R++ V+I+
Sbjct 478 LMEYLQRIPKPGEEVQVGDYLLKTLQVESHRVQKVQII 515
>Q83KI8 UPF0053 protein YegH [Shigella flexneri]
Length=527
Score = 405 bits (1041), Expect = 6e-140
Identities = 230/518 (44%), Positives = 334/518 (64%), Gaps = 16/518 (3%)
Query 1 MEFLLDPGIWVGLLTLIVLEIVLGIDNLVFIAILADKLPPEQRDKARIIGLSLALVMRLA 60
ME++ DP IW GL+TLIV+E+VLGIDNLVFIAILA+KLPP+QRD+AR+ GL LA++MRL
Sbjct 1 MEWIADPSIWAGLITLIVIELVLGIDNLVFIAILAEKLPPKQRDRARVTGLLLAMLMRLL 60
Query 61 LLSVISWLVTLTKPLIQVADYSFSGRDLILLFGGLFLVYKAVTELHEKLEGQPEIKTNSS 120
LL+ ISWLVTLT+PL ++FS RDLI+LFGG FL++KA EL+E+LEG+
Sbjct 61 LLASISWLVTLTQPLFSFRSFTFSARDLIMLFGGFFLLFKATMELNERLEGKDSNNPTQR 120
Query 121 VAYASFWAVVTQIIVLDAVFSLDSVITAIGMVDNIYVMMTAVVIAVMVMLIASKPLTAFV 180
A FW VVTQI+VLDA+FSLDSVITA+GMVD++ VMM AVVIA+ +ML+ASKPLT FV
Sbjct 121 KG-AKFWGVVTQIVVLDAIFSLDSVITAVGMVDHLLVMMAAVVIAISLMLMASKPLTQFV 179
Query 181 NRHPTVVILCLSFLLLIGISLIAEGFGFHIPKGYIYSGIGVAILIEAFNQFSQRNVAKH- 239
N HPT+VILCLSFLL+IG SL+AEGFGF IPKGY+Y+ IG +++IEA NQ + N +
Sbjct 180 NSHPTIVILCLSFLLMIGFSLVAEGFGFVIPKGYLYAAIGFSVMIEALNQLAIFNRRRFL 239
Query 240 QAKIPLRHRTANAIFKLI-GEKDEIR------SPVDQKESDGLFVAEERYMIGGVLTLAE 292
A LR RT A+ +L+ G+K++ S + + +F +ER MI VL L +
Sbjct 240 SANQTLRQRTTEAVMRLLSGQKEDAELDAKTASMLVDHGNQQIFNPQERRMIERVLNLNQ 299
Query 293 RSVASIMTPRTQISWVNIEQDPETIRQQVLAVPHSLFPVCRG-SLDKVITIARAKDLIDA 351
R+V+SIMT R I +++ E IRQ + H+ V G + ++ + DL+
Sbjct 300 RTVSSIMTSRHDIEHIDLNAPEEEIRQLLERNQHTRLVVTDGDDAEDLLGVVHVIDLLQQ 359
Query 352 LDHPDELSGVLKRQRPIFIFEKMKVIDAINTLRSSKGSLVLVSDEFGVVQGLISPLDVFE 411
+ L+ + ++P+ E + ++ A+ R+++ V DEFG V+G+++ DV E
Sbjct 360 SLRGEPLNLRVLIRQPLVFPETLPLLPALEQFRNARTHFAFVVDEFGSVEGIVTLSDVTE 419
Query 412 AIAGEFP----DADEQMDLVKVGERTWHANGLLDLYQLELELGMIELMSDHADYISVAGL 467
IAG P + D + D+ K + +W ANG + L L + + + + +Y ++AGL
Sbjct 420 TIAGNLPNEVEEIDARHDIQKNADGSWTANGHMPLEDLVQYVPL--PLDEKREYHTIAGL 477
Query 468 IMDKTNAEVKIGTSVFHEDIYFEVIEMDGNRIKMVKIV 505
+M+ K G V D + ++++ +R++ V+I+
Sbjct 478 LMEYLQRIPKPGEEVQVGDYLLKTLQVESHRVQKVQII 515
>P67127 UPF0053 inner membrane protein YgdQ [Escherichia coli
(strain K12)]
Length=237
Score = 231 bits (588), Expect = 5e-76
Identities = 117/228 (51%), Positives = 164/228 (72%), Gaps = 5/228 (2%)
Query 3 FLLDPGIWVGLLTLIVLEIVLGIDNLVFIAILADKLPPEQRDKARIIGLSLALVMRLALL 62
++ DP W+ L TL +LEIVLGIDN++F++++ KLP QR AR +GL+ A+VMRLALL
Sbjct 5 WITDPNAWLALGTLTLLEIVLGIDNIIFLSLVVAKLPTAQRAHARRLGLAGAMVMRLALL 64
Query 63 SVISWLVTLTKPLIQVADYSFSGRDLILLFGGLFLVYKAVTELHEKLEGQPE-IKTNSSV 121
+ I+W+ LT PL + S RDLILL GGLFL++KA E+HE +EG+ E +KT S
Sbjct 65 ASIAWVTRLTNPLFTIFSQEISARDLILLLGGLFLIWKASKEIHESIEGEEEGLKTRVS- 123
Query 122 AYASFWAVVTQIIVLDAVFSLDSVITAIGMVDNIYVMMTAVVIAVMVMLIASKPLTAFVN 181
SF + QI++LD +FSLDSVITA+G+ D++++MM AVVIAV VM+ A++ + FV
Sbjct 124 ---SFLGAIVQIMLLDIIFSLDSVITAVGLSDHLFIMMAAVVIAVGVMMFAARSIGDFVE 180
Query 182 RHPTVVILCLSFLLLIGISLIAEGFGFHIPKGYIYSGIGVAILIEAFN 229
RHP+V +L LSFL+L+G +LI E F H+PKGYIY + +I +E+ N
Sbjct 181 RHPSVKMLALSFLILVGFTLILESFDIHVPKGYIYFAMFFSIAVESLN 228
>P67128 UPF0053 inner membrane protein YgdQ [Escherichia coli
O6:H1 (strain CFT073 / ATCC 700928 / UPEC)]
Length=237
Score = 231 bits (588), Expect = 5e-76
Identities = 117/228 (51%), Positives = 164/228 (72%), Gaps = 5/228 (2%)
Query 3 FLLDPGIWVGLLTLIVLEIVLGIDNLVFIAILADKLPPEQRDKARIIGLSLALVMRLALL 62
++ DP W+ L TL +LEIVLGIDN++F++++ KLP QR AR +GL+ A+VMRLALL
Sbjct 5 WITDPNAWLALGTLTLLEIVLGIDNIIFLSLVVAKLPTAQRAHARRLGLAGAMVMRLALL 64
Query 63 SVISWLVTLTKPLIQVADYSFSGRDLILLFGGLFLVYKAVTELHEKLEGQPE-IKTNSSV 121
+ I+W+ LT PL + S RDLILL GGLFL++KA E+HE +EG+ E +KT S
Sbjct 65 ASIAWVTRLTNPLFTIFSQEISARDLILLLGGLFLIWKASKEIHESIEGEEEGLKTRVS- 123
Query 122 AYASFWAVVTQIIVLDAVFSLDSVITAIGMVDNIYVMMTAVVIAVMVMLIASKPLTAFVN 181
SF + QI++LD +FSLDSVITA+G+ D++++MM AVVIAV VM+ A++ + FV
Sbjct 124 ---SFLGAIVQIMLLDIIFSLDSVITAVGLSDHLFIMMAAVVIAVGVMMFAARSIGDFVE 180
Query 182 RHPTVVILCLSFLLLIGISLIAEGFGFHIPKGYIYSGIGVAILIEAFN 229
RHP+V +L LSFL+L+G +LI E F H+PKGYIY + +I +E+ N
Sbjct 181 RHPSVKMLALSFLILVGFTLILESFDIHVPKGYIYFAMFFSIAVESLN 228
>P67129 UPF0053 inner membrane protein YgdQ [Escherichia coli
O157:H7]
Length=237
Score = 231 bits (588), Expect = 5e-76
Identities = 117/228 (51%), Positives = 164/228 (72%), Gaps = 5/228 (2%)
Query 3 FLLDPGIWVGLLTLIVLEIVLGIDNLVFIAILADKLPPEQRDKARIIGLSLALVMRLALL 62
++ DP W+ L TL +LEIVLGIDN++F++++ KLP QR AR +GL+ A+VMRLALL
Sbjct 5 WITDPNAWLALGTLTLLEIVLGIDNIIFLSLVVAKLPTAQRAHARRLGLAGAMVMRLALL 64
Query 63 SVISWLVTLTKPLIQVADYSFSGRDLILLFGGLFLVYKAVTELHEKLEGQPE-IKTNSSV 121
+ I+W+ LT PL + S RDLILL GGLFL++KA E+HE +EG+ E +KT S
Sbjct 65 ASIAWVTRLTNPLFTIFSQEISARDLILLLGGLFLIWKASKEIHESIEGEEEGLKTRVS- 123
Query 122 AYASFWAVVTQIIVLDAVFSLDSVITAIGMVDNIYVMMTAVVIAVMVMLIASKPLTAFVN 181
SF + QI++LD +FSLDSVITA+G+ D++++MM AVVIAV VM+ A++ + FV
Sbjct 124 ---SFLGAIVQIMLLDIIFSLDSVITAVGLSDHLFIMMAAVVIAVGVMMFAARSIGDFVE 180
Query 182 RHPTVVILCLSFLLLIGISLIAEGFGFHIPKGYIYSGIGVAILIEAFN 229
RHP+V +L LSFL+L+G +LI E F H+PKGYIY + +I +E+ N
Sbjct 181 RHPSVKMLALSFLILVGFTLILESFDIHVPKGYIYFAMFFSIAVESLN 228
>P43932 UPF0053 protein HI_0056 [Haemophilus influenzae (strain
ATCC 51907 / DSM 11121 / KW20 / Rd)]
Length=237
Score = 227 bits (578), Expect = 1e-74
Identities = 117/228 (51%), Positives = 160/228 (70%), Gaps = 1/228 (0%)
Query 2 EFLLDPGIWVGLLTLIVLEIVLGIDNLVFIAILADKLPPEQRDKARIIGLSLALVMRLAL 61
E++ DP W+ L+TL LEIVLGIDN++FI IL +LP QR RI+GL+LA++ R+ L
Sbjct 3 EWIADPEAWISLVTLAALEIVLGIDNIIFINILVGRLPERQRQSGRILGLALAMLTRILL 62
Query 62 LSVISWLVTLTKPLIQVADYSFSGRDLILLFGGLFLVYKAVTELHEKLEGQPEIKTNSSV 121
L ++W++ LT PL V + SGRDLILL GGLFL+ K+ E+ E + Q E + S
Sbjct 63 LMSLAWIMKLTAPLFTVFNQEISGRDLILLIGGLFLIIKSSGEIKEAINHQ-EHHESESK 121
Query 122 AYASFWAVVTQIIVLDAVFSLDSVITAIGMVDNIYVMMTAVVIAVMVMLIASKPLTAFVN 181
S+ V+ QI VLD VFSLDSVITA+GM ++ VM+ A++IAV VM+ A+KP+ FV+
Sbjct 122 NKVSYLGVLIQIAVLDIVFSLDSVITAVGMASHLPVMILAIMIAVGVMMFAAKPIGDFVD 181
Query 182 RHPTVVILCLSFLLLIGISLIAEGFGFHIPKGYIYSGIGVAILIEAFN 229
HPT+ IL L+FL+L+GISLIAE HIPKGYIY +G ++++E N
Sbjct 182 THPTLKILALAFLVLVGISLIAESLDIHIPKGYIYFAMGFSVVVEMIN 229
>Q48446 Uncharacterized 18.9 kDa protein in cps region [Klebsiella
pneumoniae]
Length=170
Score = 206 bits (524), Expect = 2e-67
Identities = 105/154 (68%), Positives = 126/154 (82%), Gaps = 1/154 (1%)
Query 1 MEFLLDPGIWVGLLTLIVLEIVLGIDNLVFIAILADKLPPEQRDKARIIGLSLALVMRLA 60
ME++ DP IW GL+TL+V+E+VLGIDNLVFIAILA+KLPP QRD+ARI GL LA+ MRL
Sbjct 16 MEWIADPSIWAGLVTLVVIELVLGIDNLVFIAILAEKLPPAQRDRARITGLMLAMGMRLL 75
Query 61 LLSVISWLVTLTKPLIQVADYSFSGRDLILLFGGLFLVYKAVTELHEKLEGQPEIKTNSS 120
LL+ ISWLVTLTKPLI D+SFS RDLI+LFGGLFL++KA EL+E+LEG+
Sbjct 76 LLASISWLVTLTKPLIVFHDFSFSARDLIMLFGGLFLLFKATVELNERLEGKDSDNPTQR 135
Query 121 VAYASFWAVVTQIIVLDAVFSLDSVITAIGMVDN 154
A FWAVV QI+VLDA+FSLDSVITA+GMVD+
Sbjct 136 KG-AKFWAVVAQIVVLDAIFSLDSVITAVGMVDH 168
>Q48445 UPF0053 protein in cps region [Klebsiella pneumoniae]
Length=320
Score = 156 bits (395), Expect = 1e-46
Identities = 105/297 (35%), Positives = 160/297 (54%), Gaps = 15/297 (5%)
Query 187 VILCLSFLLLIGISLIAEGFGFHIPKGYIYSGIGVAILIEAFNQFSQRNVAKH-QAKIPL 245
+ILCLSFLL+IG SLIAEGF F IPKGY+Y+ IG +++IEA NQ +Q N + A + L
Sbjct 1 MILCLSFLLMIGFSLIAEGFSFIIPKGYLYAAIGFSVMIEALNQLAQFNRRRFLSANMTL 60
Query 246 RHRTANAIFKLI-GEKD------EIRSPVDQKESDGLFVAEERYMIGGVLTLAERSVASI 298
R RT A+ L+ G+K+ + S V ++ LF +ER MI VL L +RSV+SI
Sbjct 61 RQRTTEAVMNLLSGQKEKAELDADTASLVADQDQHPLFNPQERLMIERVLNLNQRSVSSI 120
Query 299 MTPRTQISWVNIEQDPETIRQQVLAVPHSLFPVCRG-SLDKVITIARAKDLIDALDHPDE 357
MT R I +N+ E IR V H+ V G + ++ + DL+ +
Sbjct 121 MTSRHDIERINLSAPEEEIRSLVEKNQHTRLVVTGGKDNEDLLGVVHVIDLLQQSLRQEP 180
Query 358 LSGVLKRQRPIFIFEKMKVIDAINTLRSSKGSLVLVSDEFGVVQGLISPLDVFEAIAGEF 417
L ++P+ E + ++ A+ R ++ V DEFG V+G+++ DV E IAG
Sbjct 181 LDLQALVRQPLVFPEGLPLLSALEQFRQARTHFAFVVDEFGSVEGIVTLSDVMETIAGNL 240
Query 418 P----DADEQMDLVKVGERTWHANGLLDLYQLELELGMIELMSDHADYISVAGLIMD 470
P + D + D+ + +W NG + L L + + + D +Y +VAGL+M+
Sbjct 241 PNEVEEIDARHDIQHHQDGSWTVNGHMPLEDLVQYVPL--PLDDKREYHTVAGLLME 295
>O05961 Hemolysin C [Rickettsia prowazekii (strain Madrid E)]
Length=303
Score = 90.9 bits (224), Expect = 2e-23
Identities = 66/234 (28%), Positives = 121/234 (52%), Gaps = 11/234 (5%)
Query 279 EERYMIGGVLTLAERSVASIMTPRTQISWVNIEQDPETIRQQV-LAVPHSLFPVCRGSLD 337
+E ++ +L L ++ V IM PR+ I + + + E + + + +AVPH+ + G+LD
Sbjct 61 DEFNILANLLKLEDKIVEDIMVPRSDIIAIKLTTNLEELSESIKIAVPHTRTLIYDGTLD 120
Query 338 KVITIARAKDLIDALDHPDELSGVLKR--QRPIFIFEKMKVIDAINTLRSSKGSLVLVSD 395
V+ KDL AL + + LKR ++ I MK++D + +R + + +V D
Sbjct 121 NVVGFIHIKDLFKAL--ATKQNSPLKRLIRKHIIAAPSMKLLDLLAKMRRERTHIAIVVD 178
Query 396 EFGVVQGLISPLDVFEAIAGEFPDA-DEQMDLVK---VGERTWHANGLLDLYQLELELGM 451
E+G GL++ D+ E I G D D+Q+D + T AN +++ LE +G
Sbjct 179 EYGGTDGLVTIEDLIEEIVGRIDDEHDQQLDSANFKVINNSTIIANARIEVELLEEIIGE 238
Query 452 IELMSDHADYISVAGLIMDKTNAEVKIGTSV-FHEDIYFEVIEMDGNRIKMVKI 504
+L +D ++ ++ GL++ + ++ IGT + E+I EV + +K VKI
Sbjct 239 -KLKNDDDEFDTIGGLVLTRVSSVPAIGTRIDISENIEIEVTDATPRSLKQVKI 291
Score = 18.5 bits (36), Expect = 9.5
Identities = 21/89 (24%), Positives = 36/89 (40%), Gaps = 11/89 (12%)
Query 355 PDELSGVLKRQRPIFIFEKMKVIDAINTLRSSKGSLVLVSDEFGVVQGLISPLDVFEAI- 413
PD G++KR + I + +D N L + L+ E +V+ ++ P AI
Sbjct 41 PDNFFGIIKRLK---INSQKMSLDEFNILAN------LLKLEDKIVEDIMVPRSDIIAIK 91
Query 414 -AGEFPDADEQMDLVKVGERTWHANGLLD 441
+ E + + RT +G LD
Sbjct 92 LTTNLEELSESIKIAVPHTRTLIYDGTLD 120
>Q68W10 Hemolysin C [Rickettsia typhi (strain ATCC VR-144 / Wilmington)]
Length=305
Score = 88.6 bits (218), Expect = 2e-22
Identities = 64/234 (27%), Positives = 120/234 (51%), Gaps = 11/234 (5%)
Query 279 EERYMIGGVLTLAERSVASIMTPRTQISWVNIEQDPETIRQQV-LAVPHSLFPVCRGSLD 337
+E ++ +L L ++V IM PR+ I + + + + + + + VPH+ + G+LD
Sbjct 61 DECNILANLLQLENKTVEDIMVPRSDIVAIKLTTNLAELSESIKIEVPHTRTLIYDGTLD 120
Query 338 KVITIARAKDLIDALDHPDELSGVLKR--QRPIFIFEKMKVIDAINTLRSSKGSLVLVSD 395
V+ KDL AL + + LKR ++ I MK++D + +R + + +V D
Sbjct 121 NVVGFIHIKDLFKAL--ATKQNSTLKRLIRKHIIAAPSMKLLDLLAKMRRERTHIAIVVD 178
Query 396 EFGVVQGLISPLDVFEAIAGEFPDA-DEQMDLVK---VGERTWHANGLLDLYQLELELGM 451
E+G GL++ D+ E I G D D+Q+D + T AN +++ LE E+
Sbjct 179 EYGGTDGLVTIEDLIEEIVGRIDDEHDQQLDSTNFKVINNSTIIANARIEVELLE-EIIK 237
Query 452 IELMSDHADYISVAGLIMDKTNAEVKIGTSV-FHEDIYFEVIEMDGNRIKMVKI 504
++ +D ++ ++ GL++ + ++ IGT + E+I EVI+ +K VKI
Sbjct 238 EKIKNDDDEFDTIGGLVLTRVSSVPAIGTRIDISENIEIEVIDATPRSLKQVKI 291
Score = 19.6 bits (39), Expect = 4.1
Identities = 16/52 (31%), Positives = 22/52 (42%), Gaps = 8/52 (15%)
Query 337 DKVITIARA-----KDLIDALDHPDELSGVLKRQRPIFIFEKMKVIDAINTL 383
+K+I I R K L PD G++KR + I K +D N L
Sbjct 18 NKLIFIVRQLFYLIKHLFSKTKTPDNFFGIIKRLK---INSKKMSLDECNIL 66
>P0A2L3 Magnesium and cobalt efflux protein CorC [Salmonella typhimurium
(strain LT2 / SGSC1412 / ATCC 700720)]
Length=292
Score = 85.9 bits (211), Expect = 1e-21
Identities = 65/254 (26%), Positives = 111/254 (44%), Gaps = 7/254 (3%)
Query 260 KDEIRSPVDQKESDGLFVAEERYMIGGVLTLAERSVASIMTPRTQISWVNIEQDPETIRQ 319
+DE+ + + + L + R M+ GV+ +A++ V IM PR+Q+ + Q +
Sbjct 34 RDELLALIRDSGQNELIDEDTRDMLEGVMDIADQRVRDIMIPRSQMITLKRNQTLDECLD 93
Query 320 QVLAVPHSLFPVCRGSLDKVITIARAKDLIDALDHPDELSGVLKRQRPIFIFEKMKVID- 378
++ HS FPV D + I AKDL+ + E + K R + + K +D
Sbjct 94 VIIESAHSRFPVISEDKDHIEGILMAKDLLPFMRSDAEAFSMDKVLRTAVVVPESKRVDR 153
Query 379 AINTLRSSKGSLVLVSDEFGVVQGLISPLDVFEAIAGEFP---DADEQMDLVKVGERTWH 435
+ RS + + +V DEFG V GL++ D+ E I GE D ++ +D ++ TW
Sbjct 154 MLKEFRSQRYHMAIVIDEFGGVSGLVTIEDILELIVGEIEDEYDEEDDIDFRQLSRHTWT 213
Query 436 ANGLLDLYQLELELGMIELMSDHADYISVAGLIMDKTNAEVKIGTSVFHEDIYFEVIEMD 495
L + G + D ++ GL+M G ++ + F+V D
Sbjct 214 IRALASIEDFNDAFG-THFSDEEVD--TIGGLVMQAFGHLPARGETIDIDGYQFKVAMAD 270
Query 496 GNRIKMVKIVYPVD 509
RI V + P D
Sbjct 271 SRRIIQVHVRIPDD 284
>P0AE45 Polyamine export protein [Escherichia coli (strain K12)]
Length=447
Score = 87.0 bits (214), Expect = 2e-21
Identities = 56/246 (23%), Positives = 119/246 (48%), Gaps = 3/246 (1%)
Query 261 DEIRSPVDQKESDGLFVAEERYMIGGVLTLAERSVASIMTPRTQISWVNIEQDPETIRQQ 320
D+I + V+ G+ +E +I V L R+V S MTPR + W ++ +D ++++ +
Sbjct 178 DDIYAVVEAGALAGVLRKQEHELIENVFELESRTVPSSMTPRENVIWFDLHEDEQSLKNK 237
Query 321 VLAVPHSLFPVCRGSLDKVITIARAKDLIDAL--DHPDELSGVLKRQRPIFIFEKMKVID 378
V PHS F VC +D +I +KDL++ + + L+ ++ + + + + + + +
Sbjct 238 VAEHPHSKFLVCNEDIDHIIGYVDSKDLLNRVLANQSLALNSGVQIRNTLIVPDTLTLSE 297
Query 379 AINTLRSSKGSLVLVSDEFGVVQGLISPLDVFEAIAGEFPDADEQMDLVKVGERTWHANG 438
A+ + +++ ++ +E+ +V G+I+ DV + G+ + +V E +W +G
Sbjct 298 ALESFKTAGEDFAVIMNEYALVVGIITLNDVMTTLMGDLVGQGLEEQIVARDENSWLIDG 357
Query 439 LLDLYQLELELGMIELMSDHADYISVAGLIMDKTNAEVKIGTSVFHEDIYFEVIEMDGNR 498
+ + L I+ +Y ++ G +M K SV FEV+++D R
Sbjct 358 GTPIDDVMRVLD-IDEFPQSGNYETIGGFMMFMLRKIPKRTDSVKFAGYKFEVVDIDNYR 416
Query 499 IKMVKI 504
I + +
Sbjct 417 IDQLLV 422
>A0A0F6BAS6 Polyamine export protein [Salmonella typhimurium (strain
14028s / SGSC 2262)]
Length=447
Score = 86.3 bits (212), Expect = 4e-21
Identities = 61/266 (23%), Positives = 125/266 (47%), Gaps = 12/266 (5%)
Query 250 ANAIFKLIG---------EKDEIRSPVDQKESDGLFVAEERYMIGGVLTLAERSVASIMT 300
AN IF+L D+I + V+ G+ +E +I V L R+V S MT
Sbjct 158 ANNIFRLFKIPMVRKDDITSDDIYAVVEAGALAGVLRKQEHELIENVFELESRTVPSSMT 217
Query 301 PRTQISWVNIEQDPETIRQQVLAVPHSLFPVCRGSLDKVITIARAKDLIDAL--DHPDEL 358
R I W ++ +D ++++++V PHS F VC +D +I +KDL++ + + L
Sbjct 218 SRESIIWFDLHEDEQSLKKKVAEHPHSKFLVCNEDIDHIIGYVDSKDLLNRVLANQSMAL 277
Query 359 SGVLKRQRPIFIFEKMKVIDAINTLRSSKGSLVLVSDEFGVVQGLISPLDVFEAIAGEFP 418
+ ++ + + + + + + +A+ + +++ ++ +E+ +V G+I+ DV + G+
Sbjct 278 NSGVQIRNTLIVPDTLTLSEALESFKTAGEDFAVIMNEYALVVGIITLNDVMTTLMGDLV 337
Query 419 DADEQMDLVKVGERTWHANGLLDLYQLELELGMIELMSDHADYISVAGLIMDKTNAEVKI 478
+ +V E +W +G + + L I+ +Y ++ G +M K
Sbjct 338 GQGLEEQIVARDENSWLVDGGTPIDDVMRVLD-IDEFPQSGNYETIGGFMMFMLRKIPKR 396
Query 479 GTSVFHEDIYFEVIEMDGNRIKMVKI 504
SV FEV+++D RI + +
Sbjct 397 TDSVKFSGYKFEVVDIDNYRIDQLLV 422
>P54428 UPF0053 protein YrkA [Bacillus subtilis (strain 168)]
Length=434
Score = 74.3 bits (181), Expect = 2e-17
Identities = 60/259 (23%), Positives = 116/259 (45%), Gaps = 12/259 (5%)
Query 255 KLIGEKDEIRSPVDQKESDGLFVAEERYMIGGVLTLAERSVASIMTPRTQISWVNIEQDP 314
+L ++E+R + + G E + + ER IM PR +I ++ E
Sbjct 176 ELAHSEEELRILLSESYKSGEINQNELKYVNNIFEFDERIAKEIMIPRREIVAISSEDSY 235
Query 315 ETIRQQVLAVPHSLFPVCRGSLDKVITIARAKDLIDA-LDHPDELSGVLKRQR----PIF 369
ETI + + ++ +PV G D +I AK+ + A +D ++ K + I
Sbjct 236 ETIVKIIKTESYTRYPVLNGDKDSIIGFINAKEFLSAYIDTDQKIKEDFKLENHINPVIH 295
Query 370 IFEKMKVIDAINTLRSSKGSLVLVSDEFGVVQGLISPLDVFEAIAGEFP---DADEQMDL 426
+ E + + D + ++ + + ++ DE+G GL++ D+ E I GE D DE ++
Sbjct 296 VIESVPIHDVLVKMQKERTHIAILVDEYGGTSGLVTAEDILEEIVGEIRDEFDKDEVPNI 355
Query 427 VKVGERTWHANGLLDLYQLELELGMIELMSDHADYISVAGLIMDKTNAEVKIGTSVFHED 486
KV + + + + + + LG L SD D ++ G M + + +G+ + +
Sbjct 356 RKVNDNHYILDSKVLIEDVNDLLG-TTLASDEVD--TIGGWFMTQ-QIDAAVGSVIEADG 411
Query 487 IYFEVIEMDGNRIKMVKIV 505
F+V E G I ++IV
Sbjct 412 YIFKVHETVGRHINYLEIV 430
>Q54318 Hemolysin C [Brachyspira hyodysenteriae]
Length=268
Score = 72.4 bits (176), Expect = 3e-17
Identities = 61/257 (24%), Positives = 113/257 (44%), Gaps = 13/257 (5%)
Query 253 IFKLIGEKDEIRSPVDQKESDGLFVAEERYMIGGVLTLAERSVASIMTPRTQISWVNIEQ 312
I K++ +KD + L AE R +I + L +SV IM PR + + +E
Sbjct 7 ISKIVKKKDSDTEKNNYINLSALTEAE-REIITNTIELKSKSVREIMVPRVDVVMIPMES 65
Query 313 DPETIRQQVLAVPHSLFPVCRGSLDKVITIARAKDLIDALDHPDELSGVLKRQRPIFIFE 372
+ + + +S PV + +D ++ + KDLIDA + L +L +P+F+
Sbjct 66 SYDKVIKAFNRDRNSRIPVYKDGIDDIVGVLYVKDLIDAEEKNFSLKKIL--HKPLFVPI 123
Query 373 KMKVIDAINTLRSSKGSLVLVSDEFGVVQGLISPLDVFEAIAGEFPDA-DEQMDLVKVGE 431
+ +++ + R + + +V DE+G G++S DV E I G+ D DE+ + +K +
Sbjct 124 SISLMELLKNFREKQIHIAMVVDEYGGFSGIVSMEDVLEQIIGDIRDEYDEEDEEIKSND 183
Query 432 RTWHANGLLDLYQLELELGMIELM----SDHADYISVAGLIMDKTNAEVKIGTSVFHEDI 487
L+D + E++ D AD +V G + K + +
Sbjct 184 ---DGTYLVDARTRIDDFNKYEILPPIPDDEAD--TVGGFLFSYLGRLPKRNEDIEYNGY 238
Query 488 YFEVIEMDGNRIKMVKI 504
F V+ GN + ++I
Sbjct 239 SFTVVGKSGNIVTKIRI 255
>P37908 UPF0053 inner membrane protein YfjD [Escherichia coli
(strain K12)]
Length=428
Score = 67.4 bits (163), Expect = 4e-15
Identities = 63/255 (25%), Positives = 122/255 (48%), Gaps = 12/255 (5%)
Query 260 KDEIRSPVDQKESDGLFVAEERYMIGGVLTLAERSVASIMTPRTQISWVNIEQDPETIRQ 319
K+E+R+ V + S + M+ VL L + +V IM PR++I ++I D ++I +
Sbjct 171 KEELRTIVHESRSQ--ISRRNQDMLLSVLDLEKMTVDDIMVPRSEIIGIDINDDWKSILR 228
Query 320 QVLAVPHSLFPVCRGSLDKVITIARAKDLIDALDHPDELS--GVLKRQRPI-FIFEKMKV 376
Q+ PH + R SLD I++ R ++ + E + +L+ I F+ E +
Sbjct 229 QLSHSPHGRIVLYRDSLDDAISMLRVREAWRLMSEKKEFTKETMLRAADEIYFVPEGTPL 288
Query 377 IDAINTLRSSKGSLVLVSDEFGVVQGLISPLDVFEAIAGEFPDADEQM---DLVKVGERT 433
+ + +K + LV +E+G +QGL++ D+ E I G+F + ++ + +
Sbjct 289 STQLVKFQRNKKKVGLVVNEYGDIQGLVTVEDILEEIVGDFTTSMSPTLAEEVTPQNDGS 348
Query 434 WHANGLLDLYQLELELGMIELMSDHADYISVAGLIMDKTNAEVKIGTSVFHEDIYFEVIE 493
+G ++ ++ L D D +V G+I++ GT V + ++++
Sbjct 349 VIIDGTANVREINKAFNW-HLPED--DARTVNGVILEALEEIPVAGTRVRIGEYDIDILD 405
Query 494 MDGNRIKMVKIVYPV 508
+ N IK VK V+PV
Sbjct 406 VQDNMIKQVK-VFPV 419
Lambda K H a alpha
0.325 0.142 0.405 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 3345672
Database: 8d4e2f98e0934576f86a17ffdbc5e3e7.SwissProt.fasta
Posted date: May 29, 2024 9:08 PM
Number of letters in database: 8,525
Number of sequences in database: 22
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
