BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 388a9c13f328e47233051b5a0f7239a6.SwissProt.fasta
9 sequences; 4,121 total letters
Query= ACIAD2336
Length=381
Score E
Sequences producing significant alignments: (Bits) Value
P64613 Cell division protein ZapE [Escherichia coli O157:H7] 341 3e-119
P64612 Cell division protein ZapE [Escherichia coli (strain K12)] 341 3e-119
Q3V384 AFG1-like ATPase [Mus musculus] 217 1e-69
Q32PX9 AFG1-like ATPase [Rattus norvegicus] 216 2e-69
Q8WV93 AFG1-like ATPase [Homo sapiens] 216 3e-69
P46441 Putative ATPase N2B [Haematobia irritans] 214 1e-68
Q5TYS0 Lactation elevated protein 1 homolog B [Danio rerio] 199 2e-62
O42895 Uncharacterized protein C115.02c [Schizosaccharomyces pomb... 183 6e-57
P32317 Protein AFG1 [Saccharomyces cerevisiae (strain ATCC 204508... 148 1e-43
>P64613 Cell division protein ZapE [Escherichia coli O157:H7]
Length=375
Score = 341 bits (875), Expect = 3e-119
Identities = 167/368 (45%), Positives = 242/368 (66%), Gaps = 12/368 (3%)
Query 16 SPAERYAQALASGQFMPDEAQAQAVQELERVWQELLSRYKASKKAF------------RR 63
+P +Y +AL G PD+ Q +AV LE ++QEL++ + + R
Sbjct 5 TPTSQYLKALNEGSHQPDDVQKEAVSRLEIIYQELINSTPPAPRTSGLMARVGKLWGKRE 64
Query 64 FRRQTSPKGVYMWGGVGRGKTWLMDQFYDSIPFRRKTRMHFHHFMQHVHRELNKLSGQRN 123
+ T +G+YMWGGVGRGKTWLMD FY S+P RK R+HFH FM VH EL L GQ +
Sbjct 65 DTKHTPVRGLYMWGGVGRGKTWLMDLFYQSLPGERKQRLHFHRFMLRVHEELTALQGQTD 124
Query 124 PLDLVADQIYKDAVIICFDEFFVSNVTDAMILSDLFQKLFNRGVTLVATSNIAPDGLYKN 183
PL+++AD+ + ++CFDEFFVS++TDAM+L L + LF RG+TLVATSNI PD LY+N
Sbjct 125 PLEIIADRFKAETDVLCFDEFFVSDITDAMLLGGLMKALFARGITLVATSNIPPDELYRN 184
Query 184 GIHRDRFLPTIELVQKNCTILNVDAGVDYRLRVLKQAQLFKHPLTDDAKIWMSQRFSAIT 243
G+ R RFLP I+ ++++C ++NVDAGVDYRLR L QA L+ PL D+ + M + + A+
Sbjct 185 GLQRARFLPAIDAIKQHCDVMNVDAGVDYRLRTLTQAHLWLSPLHDETRAQMDKLWLALA 244
Query 244 RSQIVSQQPITINNRVVETLGHTEDVLWCEFSELCLKPRSPADFIEIANIYNTVLVSNVP 303
+ + + IN+R + T+G L F+ LC+ RS D+I ++ +++TV++ +VP
Sbjct 245 GGKRENSPTLEINHRPLATMGVENQTLAVSFTTLCVDARSQHDYIALSRLFHTVMLFDVP 304
Query 304 HLTDYLSEGTRRFIYLVDEFYDRGVKLLLTSQDSIIEIYEGEKLAFEIERTRSRLLEMQS 363
+T + RRFI LVDEFY+R VKL+++++ + EIY+G++L FE +R SRL EMQS
Sbjct 305 VMTRLMESEARRFIALVDEFYERHVKLVVSAEVPLYEIYQGDRLKFEFQRCLSRLQEMQS 364
Query 364 DEYLHSEH 371
+EYL EH
Sbjct 365 EEYLKREH 372
>P64612 Cell division protein ZapE [Escherichia coli (strain K12)]
Length=375
Score = 341 bits (875), Expect = 3e-119
Identities = 167/368 (45%), Positives = 242/368 (66%), Gaps = 12/368 (3%)
Query 16 SPAERYAQALASGQFMPDEAQAQAVQELERVWQELLSRYKASKKAF------------RR 63
+P +Y +AL G PD+ Q +AV LE ++QEL++ + + R
Sbjct 5 TPTSQYLKALNEGSHQPDDVQKEAVSRLEIIYQELINSTPPAPRTSGLMARVGKLWGKRE 64
Query 64 FRRQTSPKGVYMWGGVGRGKTWLMDQFYDSIPFRRKTRMHFHHFMQHVHRELNKLSGQRN 123
+ T +G+YMWGGVGRGKTWLMD FY S+P RK R+HFH FM VH EL L GQ +
Sbjct 65 DTKHTPVRGLYMWGGVGRGKTWLMDLFYQSLPGERKQRLHFHRFMLRVHEELTALQGQTD 124
Query 124 PLDLVADQIYKDAVIICFDEFFVSNVTDAMILSDLFQKLFNRGVTLVATSNIAPDGLYKN 183
PL+++AD+ + ++CFDEFFVS++TDAM+L L + LF RG+TLVATSNI PD LY+N
Sbjct 125 PLEIIADRFKAETDVLCFDEFFVSDITDAMLLGGLMKALFARGITLVATSNIPPDELYRN 184
Query 184 GIHRDRFLPTIELVQKNCTILNVDAGVDYRLRVLKQAQLFKHPLTDDAKIWMSQRFSAIT 243
G+ R RFLP I+ ++++C ++NVDAGVDYRLR L QA L+ PL D+ + M + + A+
Sbjct 185 GLQRARFLPAIDAIKQHCDVMNVDAGVDYRLRTLTQAHLWLSPLHDETRAQMDKLWLALA 244
Query 244 RSQIVSQQPITINNRVVETLGHTEDVLWCEFSELCLKPRSPADFIEIANIYNTVLVSNVP 303
+ + + IN+R + T+G L F+ LC+ RS D+I ++ +++TV++ +VP
Sbjct 245 GGKRENSPTLEINHRPLATMGVENQTLAVSFTTLCVDARSQHDYIALSRLFHTVMLFDVP 304
Query 304 HLTDYLSEGTRRFIYLVDEFYDRGVKLLLTSQDSIIEIYEGEKLAFEIERTRSRLLEMQS 363
+T + RRFI LVDEFY+R VKL+++++ + EIY+G++L FE +R SRL EMQS
Sbjct 305 VMTRLMESEARRFIALVDEFYERHVKLVVSAEVPLYEIYQGDRLKFEFQRCLSRLQEMQS 364
Query 364 DEYLHSEH 371
+EYL EH
Sbjct 365 EEYLKREH 372
>Q3V384 AFG1-like ATPase [Mus musculus]
Length=480
Score = 217 bits (552), Expect = 1e-69
Identities = 132/398 (33%), Positives = 211/398 (53%), Gaps = 49/398 (12%)
Query 17 PAERYAQALASGQFMPDEAQAQAVQELERVWQELLSRYKASKKAF--RRFRRQTSPKGVY 74
P + Y + S + DE Q + VQ L+++ QE L Y + + F R PKG+Y
Sbjct 75 PLDHYDFLIKSQELREDEHQRRVVQCLQKL-QEDLKGYSIEEGGLFSKLFSRNKPPKGLY 133
Query 75 MWGGVGRGKTWLMDQFYDSIPFRRKTRMHFHHFMQHVHRELNKL------------SGQR 122
++G VG GKT +MD FY + +RK R+HFH FM VHR ++ L +
Sbjct 134 VYGDVGTGKTMVMDMFYAYVETKRKKRVHFHGFMLDVHRRIHHLKQSLPKRKAGFMAKSY 193
Query 123 NPLDLVADQIYKDAVIICFDEFFVSNVTDAMILSDLFQKLFNRGVTLVATSNIAPDGLYK 182
+P+ +A++I ++ ++CFDEF V+++ DAMIL LF+ LF GV +VATSN P+ LYK
Sbjct 194 DPIAPIAEEISQETSLLCFDEFQVTDIADAMILKQLFENLFKNGVVVVATSNRPPEDLYK 253
Query 183 NGIHRDRFLPTIELVQKNCTILNVDAGVDYRLRVLKQA-QLFKHPLTDDAKIWMSQRFSA 241
NG+ R F+P I ++++ C L +D+GVDYR R L A +L+ D + + + F
Sbjct 254 NGLQRANFVPFIAVLKEYCDTLQLDSGVDYRKRELAPAGKLYYLTSEADVEAVVDKLFDE 313
Query 242 ITRSQ--IVSQQPITINNRVVETLGHTEDVLWCEFSELCLKPRSPADFIEIANIYNTVLV 299
+ + Q + S + + + R + V C F ELC +P +D++E++ ++TV++
Sbjct 314 LAQKQNDLTSPRILKVQGRELRLNKACGSVADCTFEELCERPLGASDYLELSKNFDTVII 373
Query 300 SNVPHLTDYLSEGTRRFIYLVDEFYDRGVKLLLT-------------------------- 333
N+P + RRFI L+D FYD V+++ +
Sbjct 374 RNIPQFSLAKRTQARRFITLIDNFYDFKVRIICSASAPISSLFLHQHQDSESDQSRILMD 433
Query 334 ----SQDSI-IEIYEGEKLAFEIERTRSRLLEMQSDEY 366
SQDS + ++ GE+ F +RT SRL EMQ+++Y
Sbjct 434 DLGLSQDSAGLSMFTGEEEIFAFQRTISRLTEMQTEQY 471
>Q32PX9 AFG1-like ATPase [Rattus norvegicus]
Length=480
Score = 216 bits (551), Expect = 2e-69
Identities = 134/412 (33%), Positives = 218/412 (53%), Gaps = 52/412 (13%)
Query 5 SSSHNTAFTPS-SPAERYAQALASGQFMPDEAQAQAVQELERVWQELLSRYKASKKAF-- 61
S +H+ A P Y + + + DE Q + VQ L+++ QE L Y +
Sbjct 62 SEAHSRALAVCHGPLAHYDFLIKAQELKNDEHQRRVVQCLQKL-QEDLKGYNIEEGGLFS 120
Query 62 RRFRRQTSPKGVYMWGGVGRGKTWLMDQFYDSIPFRRKTRMHFHHFMQHVHRELNKL--- 118
+ F R PKG+Y++G VG GKT +MD FY+ + + K R+HFH FM VH+ +++L
Sbjct 121 KLFSRNKPPKGLYVYGDVGTGKTMVMDMFYEYVEVKSKRRVHFHGFMLDVHKRIHRLKQS 180
Query 119 ---------SGQRNPLDLVADQIYKDAVIICFDEFFVSNVTDAMILSDLFQKLFNRGVTL 169
+ +P+ +A++I ++A ++CFDEF V+++ DAMIL LF+ LF GV +
Sbjct 181 LPKRKVGFMAKSYDPIAPIAEEISQEASLLCFDEFQVTDIADAMILKQLFENLFKNGVVV 240
Query 170 VATSNIAPDGLYKNGIHRDRFLPTIELVQKNCTILNVDAGVDYRLRVLKQAQLFKHPLTD 229
VATSN P+ LYKNG+ R F+P I ++++ C + +D+GVDYR R L A + LT
Sbjct 241 VATSNRPPEDLYKNGLQRANFVPFIAVLKEYCNTVQLDSGVDYRKRELTPAGKLYY-LTS 299
Query 230 DAKIW--MSQRFSAITRSQ--IVSQQPITINNRVVETLGHTEDVLWCEFSELCLKPRSPA 285
+A + M + F + + Q + S + + + R + V C F ELC +P +
Sbjct 300 EADVGTVMDKLFDELAQKQNDLTSPRILKVQGRELRLNKACGTVADCTFEELCERPLGAS 359
Query 286 DFIEIANIYNTVLVSNVPHLTDYLSEGTRRFIYLVDEFYDRGVKLLLT------------ 333
D++E++ ++TV++ N+P + RRFI L+D FYD V+++ +
Sbjct 360 DYLELSKNFDTVIIRNIPQFSLAKRTQVRRFITLIDNFYDFKVRIICSASVPISSLFVYQ 419
Query 334 ------------------SQDSI-IEIYEGEKLAFEIERTRSRLLEMQSDEY 366
SQDS + ++ GE+ F +RT SRL EMQ+++Y
Sbjct 420 HQDSESDQSRVLMDDLGLSQDSAGLSMFTGEEEIFSFQRTLSRLTEMQTEQY 471
>Q8WV93 AFG1-like ATPase [Homo sapiens]
Length=481
Score = 216 bits (550), Expect = 3e-69
Identities = 132/424 (31%), Positives = 222/424 (52%), Gaps = 62/424 (15%)
Query 11 AFTPSSPAERYAQALA--------------SGQFMPDEAQAQAVQELERVWQELLSRYKA 56
+ TP++ +E Y +ALA + + DE Q + +Q L+++ ++L
Sbjct 55 SMTPTATSETYLKALAVCHGPLDHYDFLIKAHELKDDEHQRRVIQCLQKLHEDLKGYNIE 114
Query 57 SKKAFRR-FRRQTSPKGVYMWGGVGRGKTWLMDQFYDSIPFRRKTRMHFHHFMQHVHREL 115
++ F + F R P+G+Y++G VG GKT +MD FY + +RK R+HFH FM VH+ +
Sbjct 115 AEGLFSKLFSRSKPPRGLYVYGDVGTGKTMVMDMFYAYVEMKRKKRVHFHGFMLDVHKRI 174
Query 116 NKL------------SGQRNPLDLVADQIYKDAVIICFDEFFVSNVTDAMILSDLFQKLF 163
++L + +P+ +A++I ++A ++CFDEF V+++ DAMIL LF+ LF
Sbjct 175 HRLKQSLPKRKPGFMAKSYDPIAPIAEEISEEACLLCFDEFQVTDIADAMILKQLFENLF 234
Query 164 NRGVTLVATSNIAPDGLYKNGIHRDRFLPTIELVQKNCTILNVDAGVDYRLRVLKQA-QL 222
GV +VATSN P+ LYKNG+ R F+P I ++++ C + +D+G+DYR R L A +L
Sbjct 235 KNGVVVVATSNRPPEDLYKNGLQRANFVPFIAVLKEYCNTVQLDSGIDYRKRELPAAGKL 294
Query 223 FKHPLTDDAKIWMSQRFSAITRSQIVSQQP--ITINNRVVETLGHTEDVLWCEFSELCLK 280
+ D + M + F + + Q +P + + R + V C F ELC +
Sbjct 295 YYLTSEADVEAVMDKLFDELAQKQNDLTRPRILKVQGRELRLNKACGTVADCTFEELCER 354
Query 281 PRSPADFIEIANIYNTVLVSNVPHLTDYLSEGTRRFIYLVDEFYDRGVKLLLT------- 333
P +D++E++ ++T+ + N+P T RRFI L+D FYD V+++ +
Sbjct 355 PLGASDYLELSKNFDTIFLRNIPQFTLANRTQGRRFITLIDNFYDLKVRIICSASTPISS 414
Query 334 -----------------------SQDSI--IEIYEGEKLAFEIERTRSRLLEMQSDEYLH 368
SQDS + ++ GE+ F +RT SRL EMQ+++Y +
Sbjct 415 LFLHQHHDSELEQSRILMDDLGLSQDSAEGLSMFTGEEEIFAFQRTISRLTEMQTEQYWN 474
Query 369 SEHR 372
R
Sbjct 475 EGDR 478
>P46441 Putative ATPase N2B [Haematobia irritans]
Length=464
Score = 214 bits (545), Expect = 1e-68
Identities = 143/431 (33%), Positives = 214/431 (50%), Gaps = 76/431 (18%)
Query 16 SPAERYAQALASGQFMPDEAQAQAVQELERVWQELLS------RYKASKKA--FRRFRRQ 67
+P + Y Q + S + +PD+ Q + QELE ++ L + R + S F RF ++
Sbjct 36 TPMQAYEQRIESKELLPDKVQKKTTQELEDLYNTLKNYQPKPVRVETSSGGGFFGRFMKK 95
Query 68 ------------TSPKGVYMWGGVGRGKTWLMDQFY---DSIPFRRKTRMHFHHFMQHVH 112
T+PKG+Y++G VG GKT LMD FY D IP +K R+HF+ FM VH
Sbjct 96 EQSAPKIELLNTTAPKGMYIYGSVGGGKTTLMDMFYSCCDDIP--KKQRVHFNSFMSKVH 153
Query 113 RELNKLSGQRNPLDL---------------VADQIYKDAVIICFDEFFVSNVTDAMILSD 157
++K+ +R P D VA+ I ++ +ICFDEF V+++ DAMIL
Sbjct 154 GLIHKVKQERGPQDRAFNSEKPLPFDPTLPVAEMIANESWLICFDEFQVTDIADAMILKS 213
Query 158 LFQKLFNRGVTLVATSNIAPDGLYKNGIHRDRFLPTIELVQKNCTILNVDAGVDYRLRVL 217
LF LFN G+ +ATSN P+ LYKNG+ R F+P I ++ C + +D+GVDYR R+
Sbjct 214 LFTHLFNEGIVCIATSNRHPNDLYKNGLQRSNFIPFIGVLLNRCNVAAMDSGVDYR-RIA 272
Query 218 KQAQLFKHPLTD-DAKIWMSQRFSAI--TRSQIVSQQPITINNRVVETLGHTEDVLWCEF 274
+ T DAK M + F + + I+ + IT R + VL F
Sbjct 273 QSGDTNYFVTTQTDAKSQMERMFKILCSQENDIIRPRTITHFGRDLTFQRTCGQVLDSNF 332
Query 275 SELCLKPRSPADFIEIANIYNTVLVSNVPHLTDYLSEGTRRFIYLVDEFYDRGVKLLLTS 334
ELC +P +D+I+I ++TVL+ +VP LT L RRFI L+D YD V++++++
Sbjct 333 EELCNRPLGGSDYIQIGQFFHTVLIHDVPQLTLLLKSQMRRFITLIDTLYDNRVRVVISA 392
Query 335 Q--------------------------------DSIIEIYEGEKLAFEIERTRSRLLEMQ 362
+ D+ ++ GE+ F +RT SRL EMQ
Sbjct 393 EVPLDQLFSFTDKPKDLADEQRMLMDDLKLGDTDTSASVFTGEEEMFAFDRTISRLYEMQ 452
Query 363 SDEYLHSEHRH 373
EY +H
Sbjct 453 KKEYWEQWAKH 463
>Q5TYS0 Lactation elevated protein 1 homolog B [Danio rerio]
Length=503
Score = 199 bits (505), Expect = 2e-62
Identities = 118/349 (34%), Positives = 187/349 (54%), Gaps = 46/349 (13%)
Query 70 PKGVYMWGGVGRGKTWLMDQFYDSIPFRRKTRMHFHHFMQHVHRELNKLSGQR------- 122
P+G Y++G VG GKT LMD FY + RRK R+HF+ FM VHR ++KL
Sbjct 152 PQGYYIYGNVGTGKTMLMDLFYSFVENRRKKRVHFNGFMLDVHRRIHKLKQSLPKRRIGK 211
Query 123 ----NPLDLVADQIYKDAVIICFDEFFVSNVTDAMILSDLFQKLFNRGVTLVATSNIAPD 178
+P+ VA +I ++ +ICFDEF V ++ DAMIL LF+ LF GV +VATSN P+
Sbjct 212 MTMYDPIFPVAMEIAEETCLICFDEFQVVDIADAMILKQLFEGLFKCGVVVVATSNRPPE 271
Query 179 GLYKNGIHRDRFLPTIELVQKNCTILNVDAGVDYRLRVLKQA-QLFKHPLTDDAKIWMSQ 237
LYKNG+ R F+P I ++++ C I+++D G+D+R R +K A +L+ DA+ ++
Sbjct 272 ELYKNGLQRAAFVPFIGVLKEYCRIVSLDTGIDFRTREMKPAGRLYYISSEPDAENAVNA 331
Query 238 RFS--AITRSQIVSQQPITINNRVVETLGHTEDVLWCEFSELCLKPRSPADFIEIANIYN 295
F A ++ + + + + R V + C F ELC +P D++EIA ++
Sbjct 332 LFEELAFRQNDVTRPRVLNVQGREVTLSRTCGTIADCSFQELCEQPLGAGDYLEIARCFD 391
Query 296 TVLVSNVPHLTDYLSEGTRRFIYLVDEFYDRGVKLLLTSQDSI----------------- 338
TV++ NVP+L + + RRF L+D FYD+ V++++ + +
Sbjct 392 TVIIRNVPYLQLGMKDQARRFTTLIDNFYDQKVRVVMLADAPLDRLLDQGQMTGEEARDR 451
Query 339 ---------------IEIYEGEKLAFEIERTRSRLLEMQSDEYLHSEHR 372
I ++ ++ F +RT SRL EMQ+++Y S R
Sbjct 452 LMLDELGLTDEASKRITLFTADEEIFAFQRTVSRLAEMQTEQYWISGDR 500
>O42895 Uncharacterized protein C115.02c [Schizosaccharomyces
pombe (strain 972 / ATCC 24843)]
Length=454
Score = 183 bits (464), Expect = 6e-57
Identities = 127/420 (30%), Positives = 198/420 (47%), Gaps = 65/420 (15%)
Query 15 SSPAERYAQALASGQFMPDEAQAQAVQELERVWQEL--------------------LSRY 54
++P E Y + + G + D Q AV+ + R++ EL LS
Sbjct 34 NTPIEVYNKKVNDGVWKRDPYQETAVKAINRLYTELESYTQPPITQDSMPAEKGSILSWI 93
Query 55 KASKKAFRRFRRQT---------SPKGVYMWGGVGRGKTWLMDQFYDSIP--FRRKTRMH 103
KK F R + T PKG+Y++G VG GKT LMD FY ++P R R+H
Sbjct 94 SPLKKMFSRKKSPTLTSSLPVPGMPKGIYLYGDVGCGKTALMDLFYHNLPPNVTRSQRIH 153
Query 104 FHHFMQHVHRELNKLSGQR----NPLDLVADQIYKDAVIICFDEFFVSNVTDAMILSDLF 159
FH FM VHR + L + + +D +A I K+ ++CFDE V++V DA++L LF
Sbjct 154 FHAFMMQVHRTSHDLQDRYGFEIDFIDHIASGIAKETTVLCFDELQVTDVADALLLRRLF 213
Query 160 QKLFNRGVTLVATSNIAPDGLYKNGIHRDRFLPTIELVQKNCTILNVDAGVDYRLRVLKQ 219
+ L GV + TSN AP LYKNGI R+ F+P I+L++ ++ +D+ DYR K
Sbjct 214 EALMKYGVVIFITSNRAPSDLYKNGIQRESFIPCIKLLEHRLQVICLDSPNDYRRLKSKT 273
Query 220 AQLFKHPL-TDDAKIWMSQRFSAIT-RSQIVSQQPITINNRVVETLGHTEDVLWCEFSEL 277
+ +P + + K + F Q + + R + + +V W F +L
Sbjct 274 EDTYLYPANSPEVKKALENWFLCYADEKDPAHQDEVEVFGRKIIVPKASGNVAWFTFEQL 333
Query 278 CLKPRSPADFIEIANIYNTVLVSNVPHLTDYLSEGTRRFIYLVDEFYDRGVKLLLTSQDS 337
C +P+S AD++ +A+ Y+ +VS++P L+ + RFI +D YD KL+L+S+
Sbjct 334 CGEPKSAADYLSLASRYHVFIVSDIPKLSIESKDLIHRFITFIDALYDTHGKLILSSEVP 393
Query 338 IIEIYE----------------------------GEKLAFEIERTRSRLLEMQSDEYLHS 369
+ EIY G + F R SRL EM+ ++HS
Sbjct 394 VQEIYPTAPSEVLSSTADPAAKGKIESHYHGAFGGIEEVFTFTRCLSRLSEMKKQSWIHS 453
>P32317 Protein AFG1 [Saccharomyces cerevisiae (strain ATCC 204508
/ S288c)]
Length=509
Score = 148 bits (374), Expect = 1e-43
Identities = 104/325 (32%), Positives = 163/325 (50%), Gaps = 42/325 (13%)
Query 70 PKGVYMWGGVGRGKTWLMDQFYDSIPFR-RKTRMHFHHFMQHVHRELNKLSGQRNPLDL- 127
P+GVY++G VG GKT LMD FY +IP K R+HFH FMQ+VH+ +++ ++N +L
Sbjct 119 PRGVYLYGDVGCGKTMLMDLFYTTIPNHLTKKRIHFHQFMQYVHKRSHEIVREQNLKELG 178
Query 128 ------------VADQIYKDAVIICFDEFFVSNVTDAMILSDLFQKLFNR--GVTLVATS 173
+A +I ++ ++CFDEF V++V DAMIL L L + GV L ATS
Sbjct 179 DAKGKEIDTVPFLAAEIANNSHVLCFDEFQVTDVADAMILRRLMTALLSDDYGVVLFATS 238
Query 174 NIAPDGLYKNGIHRDRFLPTIELVQKNCTILNVDAGVDYRLRVLKQAQLFKHPLTDDAKI 233
N PD LY NG+ R F+P IEL++ ++ +++ DYR + ++ P K
Sbjct 239 NRHPDELYINGVQRQSFIPCIELIKHRTKVIFLNSPTDYRKIPRPVSSVYYFPSDTSIKY 298
Query 234 ---------------WMSQRFSA-----ITRSQIVSQ----QPITINNRVVETLGHTED- 268
W + A T S V + P+TI R + T
Sbjct 299 ASKECKTRRETHIKEWYNYFAQASHTDDSTDSHTVHKTFYDYPLTIWGREFKVPKCTPPR 358
Query 269 VLWCEFSELCLKPRSPADFIEIANIYNTVLVSNVPHLTDYLSEGTRRFIYLVDEFYDRGV 328
V F +LC +P + D++ +A + +V+++P+L+ Y+ + RRFI +D YD G
Sbjct 359 VAQFTFKQLCGEPLAAGDYLTLAKNFEAFIVTDIPYLSIYVRDEVRRFITFLDAVYDSGG 418
Query 329 KLLLTSQDSIIEIY-EGEKLAFEIE 352
KL T ++ E E++ + E
Sbjct 419 KLATTGAADFSSLFVEPEQILNDFE 443
Score = 17.7 bits (34), Expect = 6.1
Identities = 8/26 (31%), Positives = 12/26 (46%), Gaps = 0/26 (0%)
Query 354 TRSRLLEMQSDEYLHSEHRHINSENN 379
T+ R+ Q +Y+H I E N
Sbjct 148 TKKRIHFHQFMQYVHKRSHEIVREQN 173
Lambda K H a alpha
0.323 0.136 0.404 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 1235132
Database: 388a9c13f328e47233051b5a0f7239a6.SwissProt.fasta
Posted date: May 29, 2024 10:17 AM
Number of letters in database: 4,121
Number of sequences in database: 9
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
Loading
Data ...
