BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: f25f3bf90108ea916c190fbed98893ab.SwissProt.fasta
15 sequences; 4,648 total letters
Query= ACIAD2338
Length=337
Score E
Sequences producing significant alignments: (Bits) Value
Q9I1P2 HTH-type transcriptional regulator VqsM [Pseudomonas aerug... 78.6 8e-20
P68912 Uncharacterized HTH-type transcriptional regulator Mb1430 ... 76.6 4e-19
P9WMJ1 Uncharacterized HTH-type transcriptional regulator Rv1395 ... 76.6 4e-19
P9WMJ0 Uncharacterized HTH-type transcriptional regulator MT1440 ... 76.6 4e-19
P25393 CFA/I fimbrial subunit D [Escherichia coli] 50.8 1e-10
P9WMJ2 HTH-type transcriptional regulator VirS [Mycobacterium tub... 51.2 1e-10
P9WMJ3 HTH-type transcriptional regulator VirS [Mycobacterium tub... 51.2 1e-10
P43460 HTH-type transcriptional activator CsvR [Escherichia coli] 44.3 2e-08
Q00753 Msm operon regulatory protein [Streptococcus mutans seroty... 43.5 3e-08
O31249 HTH-type transcriptional regulator AlkR [Acinetobacter bay... 43.5 3e-08
O87389 HTH-type transcriptional regulator GlxA [Rhizobium melilot... 40.0 5e-07
P05052 HTH-type transcriptional regulator AppY [Escherichia coli ... 39.7 5e-07
P43465 Raffinose operon transcriptional regulatory protein RafR [... 39.7 5e-07
Q02458 Urease operon transcriptional activator [Proteus mirabilis... 38.5 1e-06
Q84BZ4 Anthranilate 1,2-dioxygenase regulatory protein [Burkholde... 35.0 2e-05
>Q9I1P2 HTH-type transcriptional regulator VqsM [Pseudomonas aeruginosa
(strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM
14847 / LMG 12228 / 1C / PRS 101 / PAO1)]
Length=325
Score = 78.6 bits (192), Expect = 8e-20
Identities = 68/294 (23%), Positives = 141/294 (48%), Gaps = 26/294 (9%)
Query 52 YIIGKDVDPEKGLFIGQHYALAGYGPLLMLLVTSDSIQTAIYKGIKYQKLTHLSGELDLH 111
+I+ K ++GL +G +Y ++ YG + + L+ ++++ + Y KL + D+
Sbjct 42 WIVSKGYSGKEGLNLGTYYHISDYGVIGLALLCAENVGDILKVIRAYVKLFNR----DIA 97
Query 112 TTPSKTNLVYRPVDLQSSIGL----------LRAQCEVSGTYKFIQDIYKMMGLIAPEIR 161
K Y V++ S+ S TYK I D+ +G P
Sbjct 98 NVGVKPRENYE-VEIHISVNFKPEWNDASRQFHVNVIASATYKLIMDL---LGNDFPISA 153
Query 162 VELPFEMPKQEDVLQQYYQYYGQNLHFGNNVATFSLNVDLLDVKIPSSDIITHRVYEAKC 221
+ +P + + + ++ + H GN++ FS L+ + +++ V+++
Sbjct 154 LTVPVH-GADKTIYEGFFSLPVK--HEGNDII-FSFPAHQLNRTLATAN---PAVFQSAL 206
Query 222 QLEVDRLNAE-DIKMPIIVQQVRDYLELQQGVMPTMAETAYALNIPERTLRHQLQQFDTS 280
+ + NA +++M + Q++ +L+ P++ TA L + ERT+R +L +
Sbjct 207 TMAGESFNALLEVEMGGLRQRIELFLDSIPDQYPSLVTTAKYLRMNERTVRRRLADEGCT 266
Query 281 YKKIREQLIKHKALELMEYKEYSIEMIAELLGYSEPAAFNHAFKRWFGQSPRQY 334
Y++I ++ K +A+ L+ ++ I+++LGYSE A+F HAF+RW GQS ++
Sbjct 267 YRQIVDKARKERAIALLLNSSIPVDRISDILGYSETASFRHAFRRWTGQSTTEF 320
>P68912 Uncharacterized HTH-type transcriptional regulator Mb1430
[Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)]
Length=344
Score = 76.6 bits (187), Expect = 4e-19
Identities = 69/340 (20%), Positives = 145/340 (43%), Gaps = 11/340 (3%)
Query 1 MKRSILGLMYLIQGMRNAGIDVDDRLASIGIR-LDALDPSSIIH--DSLEWDIQYIIGKD 57
++ + L + G+ D LA I D DP +++ D + + +
Sbjct 10 VRHPVYATRVLCEVANERGVPTADVLAGTAIEPADLDDPDAVVGALDEITAVRRLLARLP 69
Query 58 VDPEKGLFIGQHYALAGYGPLLMLLVTSDSIQTAIYKGIKYQKLTHLSGELDLHTTPSKT 117
D G+ +G +AL +G +++ +++ + ++Y LT + ++ L T
Sbjct 70 DDAGIGIDVGSRFALTHFGLFGFAVMSCGTLRELLTIAMRYFALTTMHVDITLFETADDC 129
Query 118 NLVYRPVDLQSSIGLLRAQCEVSGTYKFIQDI-YKMMGLIAPEIRVELPFEMPKQEDVLQ 176
+ L + + + +++G + A ++ EL + +L+
Sbjct 130 LVELDASHLPADVRGFFIERDIAGIIATTTSFALPLAAKYADQVSAELAVDAELLRPLLE 189
Query 177 QYYQYYGQNLHFGNNVATFSLNVDLLDVKIPSSDIITHRVYEAKCQLEVDRLNAEDIKMP 236
+ ++ FG + D +P +D T + A+C + + R + +
Sbjct 190 LVPVH---DVAFGRAHNRVHFPRAMFDEPLPQADRHTLEMCIAQCDVLMQR----NERRR 242
Query 237 IIVQQVRDYLELQQGVMPTMAETAYALNIPERTLRHQLQQFDTSYKKIREQLIKHKALEL 296
I VR L G+ PT + A L++ RTLR +L + TS++ + + A++L
Sbjct 243 GITALVRSKLFRDSGLFPTFTDVAGELDMHPRTLRRRLAEEGTSFRALLGEARSTVAVDL 302
Query 297 MEYKEYSIEMIAELLGYSEPAAFNHAFKRWFGQSPRQYGR 336
+ +++ ++ LGY+E + F+HAFKRW+G +P +Y R
Sbjct 303 LRNVGLTVQQVSTRLGYTEVSTFSHAFKRWYGVAPSEYSR 342
>P9WMJ1 Uncharacterized HTH-type transcriptional regulator Rv1395
[Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)]
Length=344
Score = 76.6 bits (187), Expect = 4e-19
Identities = 69/340 (20%), Positives = 145/340 (43%), Gaps = 11/340 (3%)
Query 1 MKRSILGLMYLIQGMRNAGIDVDDRLASIGIR-LDALDPSSIIH--DSLEWDIQYIIGKD 57
++ + L + G+ D LA I D DP +++ D + + +
Sbjct 10 VRHPVYATRVLCEVANERGVPTADVLAGTAIEPADLDDPDAVVGALDEITAVRRLLARLP 69
Query 58 VDPEKGLFIGQHYALAGYGPLLMLLVTSDSIQTAIYKGIKYQKLTHLSGELDLHTTPSKT 117
D G+ +G +AL +G +++ +++ + ++Y LT + ++ L T
Sbjct 70 DDAGIGIDVGSRFALTHFGLFGFAVMSCGTLRELLTIAMRYFALTTMHVDITLFETADDC 129
Query 118 NLVYRPVDLQSSIGLLRAQCEVSGTYKFIQDI-YKMMGLIAPEIRVELPFEMPKQEDVLQ 176
+ L + + + +++G + A ++ EL + +L+
Sbjct 130 LVELDASHLPADVRGFFIERDIAGIIATTTSFALPLAAKYADQVSAELAVDAELLRPLLE 189
Query 177 QYYQYYGQNLHFGNNVATFSLNVDLLDVKIPSSDIITHRVYEAKCQLEVDRLNAEDIKMP 236
+ ++ FG + D +P +D T + A+C + + R + +
Sbjct 190 LVPVH---DVAFGRAHNRVHFPRAMFDEPLPQADRHTLEMCIAQCDVLMQR----NERRR 242
Query 237 IIVQQVRDYLELQQGVMPTMAETAYALNIPERTLRHQLQQFDTSYKKIREQLIKHKALEL 296
I VR L G+ PT + A L++ RTLR +L + TS++ + + A++L
Sbjct 243 GITALVRSKLFRDSGLFPTFTDVAGELDMHPRTLRRRLAEEGTSFRALLGEARSTVAVDL 302
Query 297 MEYKEYSIEMIAELLGYSEPAAFNHAFKRWFGQSPRQYGR 336
+ +++ ++ LGY+E + F+HAFKRW+G +P +Y R
Sbjct 303 LRNVGLTVQQVSTRLGYTEVSTFSHAFKRWYGVAPSEYSR 342
>P9WMJ0 Uncharacterized HTH-type transcriptional regulator MT1440
[Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)]
Length=344
Score = 76.6 bits (187), Expect = 4e-19
Identities = 69/340 (20%), Positives = 145/340 (43%), Gaps = 11/340 (3%)
Query 1 MKRSILGLMYLIQGMRNAGIDVDDRLASIGIR-LDALDPSSIIH--DSLEWDIQYIIGKD 57
++ + L + G+ D LA I D DP +++ D + + +
Sbjct 10 VRHPVYATRVLCEVANERGVPTADVLAGTAIEPADLDDPDAVVGALDEITAVRRLLARLP 69
Query 58 VDPEKGLFIGQHYALAGYGPLLMLLVTSDSIQTAIYKGIKYQKLTHLSGELDLHTTPSKT 117
D G+ +G +AL +G +++ +++ + ++Y LT + ++ L T
Sbjct 70 DDAGIGIDVGSRFALTHFGLFGFAVMSCGTLRELLTIAMRYFALTTMHVDITLFETADDC 129
Query 118 NLVYRPVDLQSSIGLLRAQCEVSGTYKFIQDI-YKMMGLIAPEIRVELPFEMPKQEDVLQ 176
+ L + + + +++G + A ++ EL + +L+
Sbjct 130 LVELDASHLPADVRGFFIERDIAGIIATTTSFALPLAAKYADQVSAELAVDAELLRPLLE 189
Query 177 QYYQYYGQNLHFGNNVATFSLNVDLLDVKIPSSDIITHRVYEAKCQLEVDRLNAEDIKMP 236
+ ++ FG + D +P +D T + A+C + + R + +
Sbjct 190 LVPVH---DVAFGRAHNRVHFPRAMFDEPLPQADRHTLEMCIAQCDVLMQR----NERRR 242
Query 237 IIVQQVRDYLELQQGVMPTMAETAYALNIPERTLRHQLQQFDTSYKKIREQLIKHKALEL 296
I VR L G+ PT + A L++ RTLR +L + TS++ + + A++L
Sbjct 243 GITALVRSKLFRDSGLFPTFTDVAGELDMHPRTLRRRLAEEGTSFRALLGEARSTVAVDL 302
Query 297 MEYKEYSIEMIAELLGYSEPAAFNHAFKRWFGQSPRQYGR 336
+ +++ ++ LGY+E + F+HAFKRW+G +P +Y R
Sbjct 303 LRNVGLTVQQVSTRLGYTEVSTFSHAFKRWYGVAPSEYSR 342
>P25393 CFA/I fimbrial subunit D [Escherichia coli]
Length=265
Score = 50.8 bits (120), Expect = 1e-10
Identities = 28/94 (30%), Positives = 50/94 (53%), Gaps = 0/94 (0%)
Query 241 QVRDYLELQQGVMPTMAETAYALNIPERTLRHQLQQFDTSYKKIREQLIKHKALELMEYK 300
+VR+ +E T+ A A N+ E T+R +L+ +T++ +I QL KA L+
Sbjct 165 KVRNVIEKDLSRKWTLGIIADAFNVSEITIRKRLESENTNFNQILMQLRMSKAALLLLEN 224
Query 301 EYSIEMIAELLGYSEPAAFNHAFKRWFGQSPRQY 334
Y I I+ ++G S + F F + +G +P+Q+
Sbjct 225 SYQISQISNMIGISSASYFIRVFNKHYGVTPKQF 258
>P9WMJ2 HTH-type transcriptional regulator VirS [Mycobacterium
tuberculosis (strain CDC 1551 / Oshkosh)]
Length=340
Score = 51.2 bits (121), Expect = 1e-10
Identities = 44/157 (28%), Positives = 69/157 (44%), Gaps = 5/157 (3%)
Query 178 YYQYYGQNLHFGNNVATFSLNVDLLDVKIPSSDIITHRVYEAKCQLEVDRLNAEDIKMPI 237
Y + G + FG F ++ L I +D T R+ A LE L ++
Sbjct 180 YREALGCTVRFGRTWCGFEVDHRLAGRPIDHADPETKRI--ATKYLESQYLPSDATLSER 237
Query 238 IVQQVRDYLELQQGVMPTMAETAYALNIPERTLRHQLQQFDTSYKKIREQLIKHKALELM 297
+V R L Q +A+ L++ RTL+ +L + E+ + +A +
Sbjct 238 VVGLARRLLPTGQCSAEAIADQ---LDMHPRTLQRRLAAEGLRCHDLIERERRAQAARYL 294
Query 298 EYKEYSIEMIAELLGYSEPAAFNHAFKRWFGQSPRQY 334
+ IA LLGYSE +A N + +RWFG +PRQY
Sbjct 295 AQPGLYLSQIAVLLGYSEQSALNRSCRRWFGMTPRQY 331
Score = 18.9 bits (37), Expect = 2.5
Identities = 10/22 (45%), Positives = 13/22 (59%), Gaps = 2/22 (9%)
Query 19 GIDVDDRLASIGIRLDALDPSS 40
G +VD RLA G +D DP +
Sbjct 196 GFEVDHRLA--GRPIDHADPET 215
>P9WMJ3 HTH-type transcriptional regulator VirS [Mycobacterium
tuberculosis (strain ATCC 25618 / H37Rv)]
Length=340
Score = 51.2 bits (121), Expect = 1e-10
Identities = 44/157 (28%), Positives = 69/157 (44%), Gaps = 5/157 (3%)
Query 178 YYQYYGQNLHFGNNVATFSLNVDLLDVKIPSSDIITHRVYEAKCQLEVDRLNAEDIKMPI 237
Y + G + FG F ++ L I +D T R+ A LE L ++
Sbjct 180 YREALGCTVRFGRTWCGFEVDHRLAGRPIDHADPETKRI--ATKYLESQYLPSDATLSER 237
Query 238 IVQQVRDYLELQQGVMPTMAETAYALNIPERTLRHQLQQFDTSYKKIREQLIKHKALELM 297
+V R L Q +A+ L++ RTL+ +L + E+ + +A +
Sbjct 238 VVGLARRLLPTGQCSAEAIADQ---LDMHPRTLQRRLAAEGLRCHDLIERERRAQAARYL 294
Query 298 EYKEYSIEMIAELLGYSEPAAFNHAFKRWFGQSPRQY 334
+ IA LLGYSE +A N + +RWFG +PRQY
Sbjct 295 AQPGLYLSQIAVLLGYSEQSALNRSCRRWFGMTPRQY 331
Score = 18.9 bits (37), Expect = 2.5
Identities = 10/22 (45%), Positives = 13/22 (59%), Gaps = 2/22 (9%)
Query 19 GIDVDDRLASIGIRLDALDPSS 40
G +VD RLA G +D DP +
Sbjct 196 GFEVDHRLA--GRPIDHADPET 215
>P43460 HTH-type transcriptional activator CsvR [Escherichia coli]
Length=301
Score = 44.3 bits (103), Expect = 2e-08
Identities = 27/88 (31%), Positives = 43/88 (49%), Gaps = 0/88 (0%)
Query 241 QVRDYLELQQGVMPTMAETAYALNIPERTLRHQLQQFDTSYKKIREQLIKHKALELMEYK 300
+VR +E T+A A N+ E T+R +L+ DT++ +I Q KA L+
Sbjct 167 KVRGVIEKDLSRKWTLAIIADVFNVSEITIRKRLESEDTNFNQILMQSRMSKAALLLLEN 226
Query 301 EYSIEMIAELLGYSEPAAFNHAFKRWFG 328
Y I I+ ++G S + F F + FG
Sbjct 227 SYQISQISNMIGISSASYFIRIFNKHFG 254
>Q00753 Msm operon regulatory protein [Streptococcus mutans serotype
c (strain ATCC 700610 / UA159)]
Length=278
Score = 43.5 bits (101), Expect = 3e-08
Identities = 42/180 (23%), Positives = 82/180 (46%), Gaps = 12/180 (7%)
Query 166 FEMPKQEDVLQQYYQYYGQNLHFGNNVATFSLNVDLLD-VKIPSSDI----ITHRVYEAK 220
F K E++L+Q + H G + FS + ++ P + + + +Y+
Sbjct 93 FSGSKAENILKQSSLFKRFYCHSGRSSKLFSQMMTIIQFANTPLTSVNELLMVGELYKLL 152
Query 221 CQL----EVDRLNAEDIKMPIIVQQVRDYLELQQGVMPTMAETAYALNIPERTLRHQLQQ 276
L + L + V QV+ + Q G + + A LN+ R+ +++ +
Sbjct 153 AALIEEFPLSHLEESNSSTKAYVNQVKKIIHSQYGSSLRVNDIAKKLNL-SRSYLYKIFR 211
Query 277 FDT--SYKKIREQLIKHKALELMEYKEYSIEMIAELLGYSEPAAFNHAFKRWFGQSPRQY 334
T S K+ Q+ ++ L+E + SI I+ +G+S+ AF+ AFK +FG+SP ++
Sbjct 212 KSTNLSIKEYILQVRMKRSQYLLENPKLSIAEISNSVGFSDSLAFSKAFKNYFGKSPSKF 271
>O31249 HTH-type transcriptional regulator AlkR [Acinetobacter
baylyi (strain ATCC 33305 / BD413 / ADP1)]
Length=306
Score = 43.5 bits (101), Expect = 3e-08
Identities = 19/42 (45%), Positives = 29/42 (69%), Gaps = 0/42 (0%)
Query 293 ALELMEYKEYSIEMIAELLGYSEPAAFNHAFKRWFGQSPRQY 334
A++L++ + +I+ IA +GYS AF+ AFKR F QSP+ Y
Sbjct 261 AVQLLKTSQLNIQQIANKVGYSSETAFSQAFKRQFEQSPKHY 302
>O87389 HTH-type transcriptional regulator GlxA [Rhizobium meliloti
(strain 1021)]
Length=324
Score = 40.0 bits (92), Expect = 5e-07
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 4/60 (7%)
Query 272 HQLQQFDTSYKKIREQLIKHKALELMEYKEYSIEMIAELLGYSEPAAFNHAFKRWFGQSP 331
H+ F +Y++IR ++H A L++ SI IA G+S PA F++AFKR F Q+P
Sbjct 260 HRGTGFLDTYREIR---LRH-ARRLLQQSPLSIPEIAYATGFSSPAHFSNAFKRLFSQTP 315
Score = 17.3 bits (33), Expect = 7.6
Identities = 8/31 (26%), Positives = 15/31 (48%), Gaps = 0/31 (0%)
Query 81 LLVTSDSIQTAIYKGIKYQKLTHLSGELDLH 111
LL + ++TAI + + + L+G H
Sbjct 222 LLAVLEKMETAIERPLDRTAMARLAGVSPRH 252
>P05052 HTH-type transcriptional regulator AppY [Escherichia coli
(strain K12)]
Length=249
Score = 39.7 bits (91), Expect = 5e-07
Identities = 21/79 (27%), Positives = 40/79 (51%), Gaps = 0/79 (0%)
Query 256 MAETAYALNIPERTLRHQLQQFDTSYKKIREQLIKHKALELMEYKEYSIEMIAELLGYSE 315
+ + A + E ++ +L+ TS+ +I A +L+ YSI ++A+ GY+
Sbjct 155 LKDIAELIYTSESLIKKRLRDEGTSFTEILRDTRMRYAKKLITSNSYSINVVAQKCGYNS 214
Query 316 PAAFNHAFKRWFGQSPRQY 334
+ F AFK ++G +P Y
Sbjct 215 TSYFICAFKDYYGVTPSHY 233
>P43465 Raffinose operon transcriptional regulatory protein RafR
[Pediococcus pentosaceus]
Length=277
Score = 39.7 bits (91), Expect = 5e-07
Identities = 25/91 (27%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
Query 245 YLELQQGVMPTMAETAYALNIPERTLRHQLQQF-DTSYKKIREQLIKHKALELMEYKEYS 303
YL+ T+ + + LN+ L + +TS +K+ +L A + + S
Sbjct 181 YLQENYSTGCTIMDLCHYLNLSRSYLYTLFKTHANTSPQKLLTKLRLEDAKQRLSTSNNS 240
Query 304 IEMIAELLGYSEPAAFNHAFKRWFGQSPRQY 334
++ IA ++GY + F+ AFKR+ G SP Y
Sbjct 241 VQSIANMVGYKDSFTFSKAFKRYSGASPSYY 271
Score = 17.7 bits (34), Expect = 5.7
Identities = 11/39 (28%), Positives = 19/39 (49%), Gaps = 0/39 (0%)
Query 116 KTNLVYRPVDLQSSIGLLRAQCEVSGTYKFIQDIYKMMG 154
KT+ P L + + L A+ +S + +Q I M+G
Sbjct 211 KTHANTSPQKLLTKLRLEDAKQRLSTSNNSVQSIANMVG 249
>Q02458 Urease operon transcriptional activator [Proteus mirabilis
(strain HI4320)]
Length=293
Score = 38.5 bits (88), Expect = 1e-06
Identities = 22/79 (28%), Positives = 37/79 (47%), Gaps = 0/79 (0%)
Query 256 MAETAYALNIPERTLRHQLQQFDTSYKKIREQLIKHKALELMEYKEYSIEMIAELLGYSE 315
+ + A L TLR L + S+ ++ + AL + + YS+ I+ G+
Sbjct 187 LEDVAKTLYTTPSTLRRHLSKEGVSFCQLLLDVRMPIALNYLTFSNYSVFQISHRCGFGS 246
Query 316 PAAFNHAFKRWFGQSPRQY 334
A F AFKR +G +P Q+
Sbjct 247 NAYFCDAFKRKYGMTPSQF 265
>Q84BZ4 Anthranilate 1,2-dioxygenase regulatory protein [Burkholderia
cepacia]
Length=318
Score = 35.0 bits (79), Expect = 2e-05
Identities = 26/82 (32%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query 256 MAETAYALNIPERTLRHQLQQFD--TSYKKIREQLIKHKALELM--EYKEYSIEMIAELL 311
+A+ A N+PERTLR QF + + +R ++H A EL+ E I +A
Sbjct 232 LADIVVAANVPERTLRDAFLQFRGMSPMQYLRATRLEH-ARELLRRSQPERRIADVALDC 290
Query 312 GYSEPAAFNHAFKRWFGQSPRQ 333
G++ F A++ FG+SP +
Sbjct 291 GFTHLGRFAIAYREKFGESPSE 312
Score = 18.5 bits (36), Expect = 3.3
Identities = 8/15 (53%), Positives = 10/15 (67%), Gaps = 0/15 (0%)
Query 322 AFKRWFGQSPRQYGR 336
AF ++ G SP QY R
Sbjct 249 AFLQFRGMSPMQYLR 263
Lambda K H a alpha
0.323 0.140 0.406 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 1151778
Database: f25f3bf90108ea916c190fbed98893ab.SwissProt.fasta
Posted date: May 20, 2024 1:34 PM
Number of letters in database: 4,648
Number of sequences in database: 15
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
