BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 04de005d88b490cb30f3c245cae8a5ce.TrEMBL.fasta
17 sequences; 3,924 total letters
Query= ACIAD2355
Length=209
Score E
Sequences producing significant alignments: (Bits) Value
Q6F9X9 Type II secretion system protein J [Acinetobacter baylyi (... 409 2e-151
A0A7G2SIT2 Type II secretion system protein J [Acinetobacter sp] 409 2e-151
A0A0M1I3S9 Type II secretion system protein J [Acinetobacter sp. ... 301 6e-109
A0A1P8EFN6 Type II secretion system protein J [Acinetobacter soli] 301 6e-109
A0A3R8ZX69 Type II secretion system protein J [Acinetobacter soli] 299 5e-108
N9AFX1 Type II secretion system protein J [Acinetobacter soli NIP... 299 5e-108
N9D9C0 Type II secretion system protein J [Acinetobacter ursingii... 292 2e-103
A0A427PXG8 Type II secretion system protein J [Acinetobacter sp. ... 291 6e-103
A0A7T9UHG0 Type II secretion system protein J [Acinetobacter ursi... 287 8e-102
A0A009YPA2 Type II secretion system (T2SS), J family protein [Aci... 280 4e-100
E5FR49 Type II secretion system protein J [Aeromonas veronii] 66.2 1e-16
Q9ZFX1 Type II secretion system protein J [Pseudomonas alcaligenes] 62.0 3e-15
Q9XD68 Type II secretion system protein J [Legionella pneumophila] 60.8 5e-15
Q9R617 Type II secretion system protein J [Dickeya chrysanthemi] 57.0 1e-13
O32572 Type II secretion system protein J [Escherichia coli] 52.4 5e-12
Q7MPZ0 Type II secretion system protein J [Vibrio vulnificus (str... 49.7 6e-11
Q9APK5 FimA [Xanthomonas hyacinthi] 38.9 2e-07
>Q6F9X9 Type II secretion system protein J [Acinetobacter baylyi
(strain ATCC 33305 / BD413 / ADP1)]
Length=208
Score = 409 bits (1051), Expect = 2e-151
Identities = 208/208 (100%), Positives = 208/208 (100%), Gaps = 0/208 (0%)
Query 1 MKRHLGFTLIELLVSIAIFAILSALGWKIFDYLIKIKDRNQVYEQQLFELQDAYQLLLRD 60
MKRHLGFTLIELLVSIAIFAILSALGWKIFDYLIKIKDRNQVYEQQLFELQDAYQLLLRD
Sbjct 1 MKRHLGFTLIELLVSIAIFAILSALGWKIFDYLIKIKDRNQVYEQQLFELQDAYQLLLRD 60
Query 61 SLQIIPNTANINGQLRPALSLSENILQFSRGGVSDPLKEGLAPYERIEYRYVASEKVVYR 120
SLQIIPNTANINGQLRPALSLSENILQFSRGGVSDPLKEGLAPYERIEYRYVASEKVVYR
Sbjct 61 SLQIIPNTANINGQLRPALSLSENILQFSRGGVSDPLKEGLAPYERIEYRYVASEKVVYR 120
Query 121 LKYKNLNVVSSEQPVSSVVLKNVDQFQIAVLNPQLSTQWPDPQIDLTQSQNLRILPRGLK 180
LKYKNLNVVSSEQPVSSVVLKNVDQFQIAVLNPQLSTQWPDPQIDLTQSQNLRILPRGLK
Sbjct 121 LKYKNLNVVSSEQPVSSVVLKNVDQFQIAVLNPQLSTQWPDPQIDLTQSQNLRILPRGLK 180
Query 181 VNLNIAGTEYEWIFPLMDTQFLSGVQNN 208
VNLNIAGTEYEWIFPLMDTQFLSGVQNN
Sbjct 181 VNLNIAGTEYEWIFPLMDTQFLSGVQNN 208
>A0A7G2SIT2 Type II secretion system protein J [Acinetobacter
sp]
Length=208
Score = 409 bits (1051), Expect = 2e-151
Identities = 208/208 (100%), Positives = 208/208 (100%), Gaps = 0/208 (0%)
Query 1 MKRHLGFTLIELLVSIAIFAILSALGWKIFDYLIKIKDRNQVYEQQLFELQDAYQLLLRD 60
MKRHLGFTLIELLVSIAIFAILSALGWKIFDYLIKIKDRNQVYEQQLFELQDAYQLLLRD
Sbjct 1 MKRHLGFTLIELLVSIAIFAILSALGWKIFDYLIKIKDRNQVYEQQLFELQDAYQLLLRD 60
Query 61 SLQIIPNTANINGQLRPALSLSENILQFSRGGVSDPLKEGLAPYERIEYRYVASEKVVYR 120
SLQIIPNTANINGQLRPALSLSENILQFSRGGVSDPLKEGLAPYERIEYRYVASEKVVYR
Sbjct 61 SLQIIPNTANINGQLRPALSLSENILQFSRGGVSDPLKEGLAPYERIEYRYVASEKVVYR 120
Query 121 LKYKNLNVVSSEQPVSSVVLKNVDQFQIAVLNPQLSTQWPDPQIDLTQSQNLRILPRGLK 180
LKYKNLNVVSSEQPVSSVVLKNVDQFQIAVLNPQLSTQWPDPQIDLTQSQNLRILPRGLK
Sbjct 121 LKYKNLNVVSSEQPVSSVVLKNVDQFQIAVLNPQLSTQWPDPQIDLTQSQNLRILPRGLK 180
Query 181 VNLNIAGTEYEWIFPLMDTQFLSGVQNN 208
VNLNIAGTEYEWIFPLMDTQFLSGVQNN
Sbjct 181 VNLNIAGTEYEWIFPLMDTQFLSGVQNN 208
>A0A0M1I3S9 Type II secretion system protein J [Acinetobacter
sp. C15]
Length=207
Score = 301 bits (772), Expect = 6e-109
Identities = 144/203 (71%), Positives = 177/203 (87%), Gaps = 0/203 (0%)
Query 1 MKRHLGFTLIELLVSIAIFAILSALGWKIFDYLIKIKDRNQVYEQQLFELQDAYQLLLRD 60
MK+ GFTL+ELLV+IAIFA+LSALGWKIFDYLIK K+RNQ +E Q+FELQDAYQ++LRD
Sbjct 1 MKKRSGFTLVELLVAIAIFAVLSALGWKIFDYLIKTKERNQQHELQIFELQDAYQIILRD 60
Query 61 SLQIIPNTANINGQLRPALSLSENILQFSRGGVSDPLKEGLAPYERIEYRYVASEKVVYR 120
SLQ+IP TANINGQ+RPALSLS+ LQFS+ GVSDPLKEGLAPYERIEYRYV SEK+VYR
Sbjct 61 SLQLIPMTANINGQIRPALSLSDTSLQFSKAGVSDPLKEGLAPYERIEYRYVPSEKMVYR 120
Query 121 LKYKNLNVVSSEQPVSSVVLKNVDQFQIAVLNPQLSTQWPDPQIDLTQSQNLRILPRGLK 180
LKY++LN+ ++EQP SSV+LKNVDQF+I VLNPQ+ QWP+ DL+Q +++ LPRGLK
Sbjct 121 LKYRSLNITNNEQPESSVLLKNVDQFRITVLNPQILNQWPEAGADLSQPTSMQRLPRGLK 180
Query 181 VNLNIAGTEYEWIFPLMDTQFLS 203
+++ + YEWIFPL+DTQF+S
Sbjct 181 IDVQRSDVNYEWIFPLLDTQFMS 203
>A0A1P8EFN6 Type II secretion system protein J [Acinetobacter
soli]
Length=207
Score = 301 bits (772), Expect = 6e-109
Identities = 144/203 (71%), Positives = 177/203 (87%), Gaps = 0/203 (0%)
Query 1 MKRHLGFTLIELLVSIAIFAILSALGWKIFDYLIKIKDRNQVYEQQLFELQDAYQLLLRD 60
MK+ GFTL+ELLV+IAIFA+LSALGWKIFDYLIK K+RNQ +E Q+FELQDAYQ++LRD
Sbjct 1 MKKRSGFTLVELLVAIAIFAVLSALGWKIFDYLIKTKERNQQHELQIFELQDAYQIILRD 60
Query 61 SLQIIPNTANINGQLRPALSLSENILQFSRGGVSDPLKEGLAPYERIEYRYVASEKVVYR 120
SLQ+IP TANINGQ+RPALSLS+ LQFS+ GVSDPLKEGLAPYERIEYRYV SEK+VYR
Sbjct 61 SLQLIPMTANINGQIRPALSLSDTSLQFSKAGVSDPLKEGLAPYERIEYRYVPSEKMVYR 120
Query 121 LKYKNLNVVSSEQPVSSVVLKNVDQFQIAVLNPQLSTQWPDPQIDLTQSQNLRILPRGLK 180
LKY++LN+ ++EQP SSV+LKNVDQF+I VLNPQ+ QWP+ DL+Q +++ LPRGLK
Sbjct 121 LKYRSLNITNNEQPESSVLLKNVDQFRITVLNPQILNQWPEAGADLSQPTSMQRLPRGLK 180
Query 181 VNLNIAGTEYEWIFPLMDTQFLS 203
+++ + YEWIFPL+DTQF+S
Sbjct 181 IDVQRSDVNYEWIFPLLDTQFMS 203
>A0A3R8ZX69 Type II secretion system protein J [Acinetobacter
soli]
Length=207
Score = 299 bits (766), Expect = 5e-108
Identities = 143/203 (70%), Positives = 176/203 (87%), Gaps = 0/203 (0%)
Query 1 MKRHLGFTLIELLVSIAIFAILSALGWKIFDYLIKIKDRNQVYEQQLFELQDAYQLLLRD 60
MK+ GFTL+ELLV+IAIFA+LSALGWKIFDYLIK K+RNQ +E Q+FELQDAYQ++LRD
Sbjct 1 MKKRSGFTLVELLVAIAIFAVLSALGWKIFDYLIKTKERNQQHELQIFELQDAYQIILRD 60
Query 61 SLQIIPNTANINGQLRPALSLSENILQFSRGGVSDPLKEGLAPYERIEYRYVASEKVVYR 120
SLQ+IP TANIN Q+RPALSLS+ LQFS+ GVSDPLKEGLAPYERIEYRYV SEK+VYR
Sbjct 61 SLQLIPMTANINSQIRPALSLSDTSLQFSKAGVSDPLKEGLAPYERIEYRYVPSEKMVYR 120
Query 121 LKYKNLNVVSSEQPVSSVVLKNVDQFQIAVLNPQLSTQWPDPQIDLTQSQNLRILPRGLK 180
LKY++LN+ ++EQP SSV+LKNVDQF+I VLNPQ+ QWP+ DL+Q +++ LPRGLK
Sbjct 121 LKYRSLNITNNEQPESSVLLKNVDQFRITVLNPQILNQWPEAGADLSQPTSMQRLPRGLK 180
Query 181 VNLNIAGTEYEWIFPLMDTQFLS 203
+++ + YEWIFPL+DTQF+S
Sbjct 181 IDVQRSDVNYEWIFPLLDTQFMS 203
>N9AFX1 Type II secretion system protein J [Acinetobacter soli
NIPH 2899]
Length=207
Score = 299 bits (766), Expect = 5e-108
Identities = 143/203 (70%), Positives = 176/203 (87%), Gaps = 0/203 (0%)
Query 1 MKRHLGFTLIELLVSIAIFAILSALGWKIFDYLIKIKDRNQVYEQQLFELQDAYQLLLRD 60
MK+ GFTL+ELLV+IAIFA+LSALGWKIFDYLIK K+RNQ +E Q+FELQDAYQ++LRD
Sbjct 1 MKKRSGFTLVELLVAIAIFAVLSALGWKIFDYLIKTKERNQQHELQIFELQDAYQIILRD 60
Query 61 SLQIIPNTANINGQLRPALSLSENILQFSRGGVSDPLKEGLAPYERIEYRYVASEKVVYR 120
SLQ+IP ANINGQ+RPALSLS+ LQFS+ GVSDPLKEGLAPYERIEYRYV SEK+VYR
Sbjct 61 SLQLIPMKANINGQIRPALSLSDTSLQFSKAGVSDPLKEGLAPYERIEYRYVPSEKMVYR 120
Query 121 LKYKNLNVVSSEQPVSSVVLKNVDQFQIAVLNPQLSTQWPDPQIDLTQSQNLRILPRGLK 180
LKY++LN+ ++EQP SSV+LKNVDQF+I VLNPQ+ QWP+ DL+Q +++ LPRGLK
Sbjct 121 LKYRSLNITNNEQPESSVLLKNVDQFRITVLNPQILNQWPEAGADLSQPTSMQRLPRGLK 180
Query 181 VNLNIAGTEYEWIFPLMDTQFLS 203
+++ + YEWIFPL+DTQF+S
Sbjct 181 IDVQRSDVNYEWIFPLLDTQFMS 203
>N9D9C0 Type II secretion system protein J [Acinetobacter ursingii
ANC 3649]
Length=327
Score = 292 bits (747), Expect = 2e-103
Identities = 139/200 (70%), Positives = 173/200 (87%), Gaps = 0/200 (0%)
Query 1 MKRHLGFTLIELLVSIAIFAILSALGWKIFDYLIKIKDRNQVYEQQLFELQDAYQLLLRD 60
+K GFTL+ELLV+IAIFA+LSALGWK+FDYLIK KDRN +E+QLF LQDAYQ +LRD
Sbjct 95 LKPASGFTLVELLVAIAIFAVLSALGWKVFDYLIKTKDRNAQHEEQLFILQDAYQQILRD 154
Query 61 SLQIIPNTANINGQLRPALSLSENILQFSRGGVSDPLKEGLAPYERIEYRYVASEKVVYR 120
+LQIIP TAN+NGQ+RPALSL+ N+LQFS+ GV+DPL +G++PYERIEYRY AS+KVVYR
Sbjct 155 TLQIIPLTANMNGQIRPALSLNNNVLQFSKAGVTDPLGQGVSPYERIEYRYDASQKVVYR 214
Query 121 LKYKNLNVVSSEQPVSSVVLKNVDQFQIAVLNPQLSTQWPDPQIDLTQSQNLRILPRGLK 180
LKY +LN+ +S QP SS++LKNV+QFQI VLNPQ QWPD +D TQ+QNL++LP GLK
Sbjct 215 LKYSDLNLPNSVQPQSSILLKNVEQFQINVLNPQALNQWPDVSLDFTQTQNLKLLPAGLK 274
Query 181 VNLNIAGTEYEWIFPLMDTQ 200
+N+ IAGTEYEWI+ L+DT+
Sbjct 275 INITIAGTEYEWIYSLLDTK 294
>A0A427PXG8 Type II secretion system protein J [Acinetobacter
sp. FDAARGOS_515]
Length=347
Score = 291 bits (746), Expect = 6e-103
Identities = 138/195 (71%), Positives = 171/195 (88%), Gaps = 0/195 (0%)
Query 6 GFTLIELLVSIAIFAILSALGWKIFDYLIKIKDRNQVYEQQLFELQDAYQLLLRDSLQII 65
GFTL+ELLV+IAIFA+LSALGWK+FDYLIK KDRN +E+QLF LQDAYQ +LRD+LQII
Sbjct 120 GFTLVELLVAIAIFAVLSALGWKVFDYLIKTKDRNAQHEEQLFILQDAYQQILRDTLQII 179
Query 66 PNTANINGQLRPALSLSENILQFSRGGVSDPLKEGLAPYERIEYRYVASEKVVYRLKYKN 125
P TAN+NGQ+RPALSL+ N+LQFS+ GV+DPL +G++PYERIEYRY AS+KVVYRLKY +
Sbjct 180 PLTANMNGQIRPALSLNNNVLQFSKAGVTDPLGQGVSPYERIEYRYDASQKVVYRLKYSD 239
Query 126 LNVVSSEQPVSSVVLKNVDQFQIAVLNPQLSTQWPDPQIDLTQSQNLRILPRGLKVNLNI 185
LN+ +S QP SS++LKNV+QFQI VLNPQ QWPD +D TQ+QNL++LP GLK+N+ I
Sbjct 240 LNLPNSVQPQSSILLKNVEQFQINVLNPQALNQWPDVSLDFTQTQNLKLLPAGLKINITI 299
Query 186 AGTEYEWIFPLMDTQ 200
AGTEYEWI+ L+DT+
Sbjct 300 AGTEYEWIYSLLDTK 314
>A0A7T9UHG0 Type II secretion system protein J [Acinetobacter
ursingii]
Length=309
Score = 287 bits (735), Expect = 8e-102
Identities = 136/195 (70%), Positives = 170/195 (87%), Gaps = 0/195 (0%)
Query 6 GFTLIELLVSIAIFAILSALGWKIFDYLIKIKDRNQVYEQQLFELQDAYQLLLRDSLQII 65
GFTL+ELLV+IAIFA+LSALGWK+FDYLIK KDRN +E+QLF LQDAYQ +LRD+LQII
Sbjct 82 GFTLVELLVAIAIFAVLSALGWKVFDYLIKTKDRNAQHEEQLFILQDAYQQILRDTLQII 141
Query 66 PNTANINGQLRPALSLSENILQFSRGGVSDPLKEGLAPYERIEYRYVASEKVVYRLKYKN 125
P TAN+NGQ+RPALSL+ N+LQFS+ GV+DPL +G++PYERIEYRY AS+KVVYRLKY +
Sbjct 142 PLTANMNGQMRPALSLNNNVLQFSKAGVTDPLGQGVSPYERIEYRYDASQKVVYRLKYSD 201
Query 126 LNVVSSEQPVSSVVLKNVDQFQIAVLNPQLSTQWPDPQIDLTQSQNLRILPRGLKVNLNI 185
LN+ +S QP SS++LKNV+QFQI VLNPQ QWPD +D TQ+QNL++LP GLK+N+ +
Sbjct 202 LNLPNSIQPQSSILLKNVEQFQINVLNPQALNQWPDASLDFTQTQNLKLLPAGLKINVIM 261
Query 186 AGTEYEWIFPLMDTQ 200
GTEYEWI+ L+DT+
Sbjct 262 VGTEYEWIYSLLDTK 276
>A0A009YPA2 Type II secretion system (T2SS), J family protein
[Acinetobacter sp. 479375]
Length=225
Score = 280 bits (716), Expect = 4e-100
Identities = 132/192 (69%), Positives = 167/192 (87%), Gaps = 0/192 (0%)
Query 9 LIELLVSIAIFAILSALGWKIFDYLIKIKDRNQVYEQQLFELQDAYQLLLRDSLQIIPNT 68
++ELLV+IAIFA+LSALGWK+FDYLIK KDRN +E+QLF LQDAYQ +LRD+LQIIP T
Sbjct 1 MVELLVAIAIFAVLSALGWKVFDYLIKTKDRNAQHEEQLFILQDAYQQILRDTLQIIPLT 60
Query 69 ANINGQLRPALSLSENILQFSRGGVSDPLKEGLAPYERIEYRYVASEKVVYRLKYKNLNV 128
AN+NGQ+RPALSL+ N+LQFS+ GV+DPL +G++PYERIEYRY AS+KVVYRLKY +LN+
Sbjct 61 ANMNGQMRPALSLNNNVLQFSKAGVTDPLGQGVSPYERIEYRYDASQKVVYRLKYSDLNL 120
Query 129 VSSEQPVSSVVLKNVDQFQIAVLNPQLSTQWPDPQIDLTQSQNLRILPRGLKVNLNIAGT 188
+S QP SS++LKNV+QFQI VLNPQ QWPD +D TQ+QNL++LP GLK+N+ + GT
Sbjct 121 PNSIQPQSSILLKNVEQFQINVLNPQALNQWPDASLDFTQTQNLKLLPAGLKINVIMVGT 180
Query 189 EYEWIFPLMDTQ 200
EYEWI+ L+DT+
Sbjct 181 EYEWIYSLLDTK 192
>E5FR49 Type II secretion system protein J [Aeromonas veronii]
Length=257
Score = 66.2 bits (160), Expect = 1e-16
Identities = 57/194 (29%), Positives = 94/194 (48%), Gaps = 24/194 (12%)
Query 3 RHLGFTLIELLVSIAIFAILSALGWKIFDYLIKIKDRNQVYEQQLFELQDAYQLLLRDSL 62
RH GFTL+E+LV+IAIFA LS +++ ++ + + E +L ELQ A+ LL RD
Sbjct 13 RHAGFTLLEMLVAIAIFATLSMGAYQVLQGVLTSDEVAKRKETRLNELQLAFTLLERDIT 72
Query 63 QIIPNTANINGQLRPALSLSENI--------LQFSRGGVSDPLKEGLAP---YERIEYRY 111
Q++P + I G+ L + + F R G +P +G+ P +R+ +R
Sbjct 73 QMVPRSGRIEGENNKVLLAASRFGQQSDDWGMAFMRSGWLNP--DGMLPRSHLQRVGWR- 129
Query 112 VASEKVVYRLKYKNLNVVSSEQPVSSVVLKNVDQFQIAVLNPQLSTQWPDPQIDLTQSQN 171
++ + RL Y + V +P VL V F++ + W + + TQ
Sbjct 130 -LKDQKLERLSYLYPDPVIGTEPRIQPVLTGVTAFRLYFFD---KGNWKE---EWTQRS- 181
Query 172 LRILPRGLKVNLNI 185
+LP GL V L++
Sbjct 182 --VLPHGLAVELDL 193
>Q9ZFX1 Type II secretion system protein J [Pseudomonas alcaligenes]
Length=227
Score = 62.0 bits (149), Expect = 3e-15
Identities = 52/183 (28%), Positives = 89/183 (49%), Gaps = 6/183 (3%)
Query 3 RHLGFTLIELLVSIAIFAILSALGWKIFDYLIKIKDRNQVYEQQLFELQDAYQLLLRDSL 62
R GFTL+E+L++IAIFA+L+ +++ D +++ + EQ+L EL A RD L
Sbjct 2 RQRGFTLLEVLIAIAIFALLAMATYRMLDSVLQTDRGQRQQEQRLRELTRAMAAFERDLL 61
Query 63 QI-IPNTANINGQLRPAL---SLSENILQFSRGGVSDPLKEGLAPYERIEYRYVASEKVV 118
Q+ + + G L PAL S + L+F+R G +PL + A +R+ R+ +
Sbjct 62 QVRLRPVRDPLGDLLPALRGSSGRDTQLEFTRSGWRNPLGQPRATLQRV--RWQLEGERW 119
Query 119 YRLKYKNLNVVSSEQPVSSVVLKNVDQFQIAVLNPQLSTQWPDPQIDLTQSQNLRILPRG 178
R + L+ QP L V +F + L+ + P + + L LPR
Sbjct 120 QRAYWTVLDQAQDSQPRVQQALDGVRRFDLRFLDQEGRWLQDWPPANSAADEALTQLPRA 179
Query 179 LKV 181
+++
Sbjct 180 VEL 182
>Q9XD68 Type II secretion system protein J [Legionella pneumophila]
Length=205
Score = 60.8 bits (146), Expect = 5e-15
Identities = 48/189 (25%), Positives = 90/189 (48%), Gaps = 8/189 (4%)
Query 1 MKRHLGFTLIELLVSIAIFAILSALGWKIFDYLIKIKDRNQVYEQQLFELQDAYQLLLRD 60
M ++ GFTLIE+L+++ +FAIL+ + Y + R ++L LQ A ++ +D
Sbjct 1 MIKNKGFTLIEILIALTVFAILATITSSTLYYAFNTRTRVNAQAERLNALQLAISIIQQD 60
Query 61 SLQIIPNTANING-QLRPALSLSENILQFSRGGVSDP-LKEGLAPYERIEYRYVASEKVV 118
+ Q + N +L P L+ +R GV +P E + ER+ V + +
Sbjct 61 TSQTVERAIRGNEMRLFPIFVGQPQYLELTRDGVVNPNSTEKRSTLERV--ALVCQDSKL 118
Query 119 YRLKYKNLNVVSSEQPVSSVVLKNVDQFQIAVLNP--QLSTQWPDPQIDLTQSQNLRILP 176
R + L+ + V+L N+ + LN QL ++W + ++ Q+Q LP
Sbjct 119 LRRTWNTLDPIDRNIYKDKVLLDNLSECHFNYLNQNLQLLSEWREQAVN--QNQQREPLP 176
Query 177 RGLKVNLNI 185
+ +++NL +
Sbjct 177 KAIQMNLTL 185
>Q9R617 Type II secretion system protein J [Dickeya chrysanthemi]
Length=206
Score = 57.0 bits (136), Expect = 1e-13
Identities = 48/166 (29%), Positives = 83/166 (50%), Gaps = 14/166 (8%)
Query 6 GFTLIELLVSIAIFAILSALGWKIFDYLIKIKDRNQVYEQQLFELQDAYQLLLRDSLQII 65
GFTL+E+++++AIFA LS ++ + +++ + + E +L ELQ + L+ RD QI+
Sbjct 7 GFTLLEVMLALAIFAALSLAASQVMNGVMRNDEASARKEARLAELQRGFSLMERDFSQIV 66
Query 66 PNTANINGQL-----RPALSLSENILQFSRGGVSDPLKEGLAP---YERIEYRYVASEKV 117
P + +L R LS ++ + F R G +PL G+ P +R+ YR
Sbjct 67 PRRSQ-GYELGFYAERYQLSSADWAVSFIRNGWLNPL--GIMPRSELQRVGYRLRGD--T 121
Query 118 VYRLKYKNLNVVSSEQPVSSVVLKNVDQFQIAVLNPQ-LSTQWPDP 162
+ RL Y + +S+++P VL V F + +W DP
Sbjct 122 LERLFYDSSEPLSTQEPAVRPVLTGVTGFVLRFFGKDGWQERWDDP 167
>O32572 Type II secretion system protein J [Escherichia coli]
Length=199
Score = 52.4 bits (124), Expect = 5e-12
Identities = 49/188 (26%), Positives = 92/188 (49%), Gaps = 18/188 (10%)
Query 2 KRHLGFTLIELLVSIAIFAILSALGWKIFDYLIKIKDRNQVYEQQLFELQDAYQLLLRDS 61
+R GFTL+E+L+++A+FA LS +++ I+ + ++ Q+L ELQ + RD
Sbjct 4 QRVKGFTLLEMLLALAVFAALSISAFQVLQGGIRAHELSRDKVQRLAELQRGISQMERDL 63
Query 62 LQIIPNTANINGQL---RPALSLSENI-LQFSRGGVSDPLKEGLAPYERIEY-RYVASEK 116
Q++P + N L P L S++ + F+R +P G+ P +++ Y ++
Sbjct 64 TQMLPRHSRGNEGLLLAAPHLLKSDDWGISFTRNSWLNP--AGMLPRPELQWVGYRLRQQ 121
Query 117 VVYRLKYKNLNVVSSEQPVSSVVLKNVDQFQIA-VLNPQLSTQWPDPQIDLTQSQNLRIL 175
+ RL Y +++ S P V+L V F++ +N +W + IL
Sbjct 122 KLERLSYFHVDHPSGVSPDVRVMLDGVHAFRLRFFVNGDWQARW----------DSTGIL 171
Query 176 PRGLKVNL 183
P+ ++V L
Sbjct 172 PQAVEVTL 179
>Q7MPZ0 Type II secretion system protein J [Vibrio vulnificus
(strain YJ016)]
Length=233
Score = 49.7 bits (117), Expect = 6e-11
Identities = 50/193 (26%), Positives = 86/193 (45%), Gaps = 21/193 (11%)
Query 3 RHLGFTLIELLVSIAIFAILSALGWKIFDYLIKIKDRNQVYEQQLFELQDAYQLLLRDSL 62
R GFTLIE+LVSIAIFA LS +++ + + + + +Q +L ELQ A ++ D
Sbjct 13 RQRGFTLIEVLVSIAIFATLSVAAYQVVNQVQRSNELSQERTARLNELQRALVMMDSDFR 72
Query 63 QIIPNTANINGQ--LRPALSLSENILQFSRGGVSDPLKEGLAPYERIEYRYVASEKVVYR 120
QI NG+ + L ++ +L G+ P ++ V KV YR
Sbjct 73 QIALRQTRTNGEEPSKKLLHWADYLLDSDSKGIMFARLGWHNPQQQFPRGEVT--KVGYR 130
Query 121 LKYKNLNVV--------SSEQPVSSVVLKNVDQFQIAVLNPQLSTQWPDPQIDLTQSQNL 172
+K + L V + ++ V + +L +V++ + + QW + + N
Sbjct 131 IKDERLERVWWRYPDTPAGQEGVVTPLLSDVEELNVRFYD---GKQW------INEWSNE 181
Query 173 RILPRGLKVNLNI 185
LP + V L +
Sbjct 182 LALPAAISVELTL 194
Score = 17.7 bits (34), Expect = 2.7
Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 0/41 (0%)
Query 55 QLLLRDSLQIIPNTANINGQLRPALSLSENILQFSRGGVSD 95
+L L+D +I G L+ S SE+ Q + GG +
Sbjct 191 ELTLKDYGKIARTYLTPEGNLQKQASGSEDSGQNNSGGAGN 231
>Q9APK5 FimA [Xanthomonas hyacinthi]
Length=145
Score = 38.9 bits (89), Expect = 2e-07
Identities = 21/36 (58%), Positives = 27/36 (75%), Gaps = 1/36 (3%)
Query 1 MKRHLGFTLIELLVSIAIFAILSALGWKIF-DYLIK 35
MKR GFTLIEL+V IAI AIL+A+ ++ DY+ K
Sbjct 1 MKRQQGFTLIELMVVIAIIAILAAIALPMYQDYVAK 36
Lambda K H a alpha
0.323 0.139 0.402 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 542136
Database: 04de005d88b490cb30f3c245cae8a5ce.TrEMBL.fasta
Posted date: May 9, 2024 3:16 AM
Number of letters in database: 3,924
Number of sequences in database: 17
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
