BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: ed256b5c17ddaedde060094e4564c696.SwissProt.fasta
15 sequences; 4,091 total letters
Query= ACIAD2359
Length=258
Score E
Sequences producing significant alignments: (Bits) Value
P0AFQ8 Uncharacterized metal-dependent hydrolase YcfH [Escherichi... 217 7e-74
P0AFQ9 Uncharacterized metal-dependent hydrolase YcfH [Escherichi... 217 7e-74
P0AFQ7 Uncharacterized metal-dependent hydrolase YcfH [Escherichi... 217 7e-74
P44718 Uncharacterized metal-dependent hydrolase HI_0454 [Haemoph... 200 2e-67
Q8K9J1 Uncharacterized metal-dependent hydrolase BUsg_343 [Buchne... 187 4e-62
P57436 Uncharacterized metal-dependent hydrolase BU355 [Buchnera ... 184 3e-61
Q89AG7 Uncharacterized metal-dependent hydrolase bbp_325 [Buchner... 177 2e-58
P37545 Uncharacterized metal-dependent hydrolase YabD [Bacillus s... 172 1e-56
P73335 D-aminoacyl-tRNA deacylase [Synechocystis sp. (strain PCC ... 155 7e-50
O08343 Uncharacterized metal-dependent hydrolase TatD [Mycobacter... 152 8e-49
Q9PRC8 Uncharacterized metal-dependent hydrolase UU017 [Ureaplasm... 136 2e-42
P78005 Uncharacterized metal-dependent hydrolase MPN_009 [Mycopla... 119 4e-36
P27859 3'-5' ssDNA/RNA exonuclease TatD [Escherichia coli (strain... 107 3e-31
D4ICL5 3'-5' ssDNA/RNA exonuclease TatD [Erwinia amylovora (strai... 105 1e-30
P34220 Deoxyribonuclease Tat-D [Saccharomyces cerevisiae (strain ... 40.0 3e-07
>P0AFQ8 Uncharacterized metal-dependent hydrolase YcfH [Escherichia
coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)]
Length=265
Score = 217 bits (552), Expect = 7e-74
Identities = 115/253 (45%), Positives = 158/253 (62%), Gaps = 5/253 (2%)
Query 3 VDTHCHLTMLDLTPYQGNLDQALVEAREAGVSKFMSISVNLDDHIALAEISARHDDVGYS 62
VD+HCHL LD ++D L +A V ++++ L ++ + ++ D+V +S
Sbjct 4 VDSHCHLDGLDYESLHKDVDDVLAKAAARDVKFCLAVATTLPGYLHMRDLVGERDNVVFS 63
Query 63 VGVHPCEDAATMARATTEFLVELAQSDKVWALGETGLDYYHSDEYVDEQKACFARHIAAS 122
GVHP E L LA + V ALGETGLDYY++ E Q+ F HI
Sbjct 64 CGVHPLNQNDPY---DVEDLRRLAAEEGVVALGETGLDYYYTPETKVRQQESFIHHIQIG 120
Query 123 KIVKKPVVVHTRSAKRDTIDIIRAEASTH--GILHCFTEDWETAKAALDCGYYISFSGII 180
+ + KPV+VHTR A+ DT+ I+R E T G+LHCFTED ETA LD G+YISFSGI+
Sbjct 121 RELNKPVIVHTRDARADTLAILREEKVTDCGGVLHCFTEDRETAGKLLDLGFYISFSGIV 180
Query 181 SFKNAQDLRDVAKQVPLERVLIETDSPYLAPVPYRGKSNEPKYVPYVAQALSDLYGKPLE 240
+F+NA+ LRD A+ VPL+R+L+ETDSPYLAPVP+RGK N+P V VA+ ++ L G +E
Sbjct 181 TFRNAEQLRDAARYVPLDRLLVETDSPYLAPVPHRGKENQPAMVRDVAEYMAVLKGVAVE 240
Query 241 EIALITRQNFDNL 253
E+A +T NF L
Sbjct 241 ELAQVTTDNFARL 253
>P0AFQ9 Uncharacterized metal-dependent hydrolase YcfH [Escherichia
coli O157:H7]
Length=265
Score = 217 bits (552), Expect = 7e-74
Identities = 115/253 (45%), Positives = 158/253 (62%), Gaps = 5/253 (2%)
Query 3 VDTHCHLTMLDLTPYQGNLDQALVEAREAGVSKFMSISVNLDDHIALAEISARHDDVGYS 62
VD+HCHL LD ++D L +A V ++++ L ++ + ++ D+V +S
Sbjct 4 VDSHCHLDGLDYESLHKDVDDVLAKAAARDVKFCLAVATTLPGYLHMRDLVGERDNVVFS 63
Query 63 VGVHPCEDAATMARATTEFLVELAQSDKVWALGETGLDYYHSDEYVDEQKACFARHIAAS 122
GVHP E L LA + V ALGETGLDYY++ E Q+ F HI
Sbjct 64 CGVHPLNQNDPY---DVEDLRRLAAEEGVVALGETGLDYYYTPETKVRQQESFIHHIQIG 120
Query 123 KIVKKPVVVHTRSAKRDTIDIIRAEASTH--GILHCFTEDWETAKAALDCGYYISFSGII 180
+ + KPV+VHTR A+ DT+ I+R E T G+LHCFTED ETA LD G+YISFSGI+
Sbjct 121 RELNKPVIVHTRDARADTLAILREEKVTDCGGVLHCFTEDRETAGKLLDLGFYISFSGIV 180
Query 181 SFKNAQDLRDVAKQVPLERVLIETDSPYLAPVPYRGKSNEPKYVPYVAQALSDLYGKPLE 240
+F+NA+ LRD A+ VPL+R+L+ETDSPYLAPVP+RGK N+P V VA+ ++ L G +E
Sbjct 181 TFRNAEQLRDAARYVPLDRLLVETDSPYLAPVPHRGKENQPAMVRDVAEYMAVLKGVAVE 240
Query 241 EIALITRQNFDNL 253
E+A +T NF L
Sbjct 241 ELAQVTTDNFARL 253
>P0AFQ7 Uncharacterized metal-dependent hydrolase YcfH [Escherichia
coli (strain K12)]
Length=265
Score = 217 bits (552), Expect = 7e-74
Identities = 115/253 (45%), Positives = 158/253 (62%), Gaps = 5/253 (2%)
Query 3 VDTHCHLTMLDLTPYQGNLDQALVEAREAGVSKFMSISVNLDDHIALAEISARHDDVGYS 62
VD+HCHL LD ++D L +A V ++++ L ++ + ++ D+V +S
Sbjct 4 VDSHCHLDGLDYESLHKDVDDVLAKAAARDVKFCLAVATTLPGYLHMRDLVGERDNVVFS 63
Query 63 VGVHPCEDAATMARATTEFLVELAQSDKVWALGETGLDYYHSDEYVDEQKACFARHIAAS 122
GVHP E L LA + V ALGETGLDYY++ E Q+ F HI
Sbjct 64 CGVHPLNQNDPY---DVEDLRRLAAEEGVVALGETGLDYYYTPETKVRQQESFIHHIQIG 120
Query 123 KIVKKPVVVHTRSAKRDTIDIIRAEASTH--GILHCFTEDWETAKAALDCGYYISFSGII 180
+ + KPV+VHTR A+ DT+ I+R E T G+LHCFTED ETA LD G+YISFSGI+
Sbjct 121 RELNKPVIVHTRDARADTLAILREEKVTDCGGVLHCFTEDRETAGKLLDLGFYISFSGIV 180
Query 181 SFKNAQDLRDVAKQVPLERVLIETDSPYLAPVPYRGKSNEPKYVPYVAQALSDLYGKPLE 240
+F+NA+ LRD A+ VPL+R+L+ETDSPYLAPVP+RGK N+P V VA+ ++ L G +E
Sbjct 181 TFRNAEQLRDAARYVPLDRLLVETDSPYLAPVPHRGKENQPAMVRDVAEYMAVLKGVAVE 240
Query 241 EIALITRQNFDNL 253
E+A +T NF L
Sbjct 241 ELAQVTTDNFARL 253
>P44718 Uncharacterized metal-dependent hydrolase HI_0454 [Haemophilus
influenzae (strain ATCC 51907 / DSM 11121 / KW20 /
Rd)]
Length=260
Score = 200 bits (508), Expect = 2e-67
Identities = 110/253 (43%), Positives = 150/253 (59%), Gaps = 4/253 (2%)
Query 3 VDTHCHLTMLDLTPYQGNLDQALVEAREAGVSKFMSISVNLDDHIALAEISARHDDVGYS 62
VD+HCHL LD N+ + +A V ++I V L + ++V +
Sbjct 4 VDSHCHLDALDYENLHKNISDVVEKAHARDVKHLLAIGVTLSRFEQAYDSLREFNNVSLA 63
Query 63 VGVHPCEDAATMARATTEFLVELAQSDKVWALGETGLDYYHSDEYVDEQKACFARHIAAS 122
GVHP + A E L+ LAQ KV A+GE GLDYY+S + Q+A F I +
Sbjct 64 CGVHPLDFEEEPYDA--ERLLRLAQDPKVIAIGEIGLDYYYSADNKAAQQAVFGSQIDIA 121
Query 123 KIVKKPVVVHTRSAKRDTIDIIRAEASTH--GILHCFTEDWETAKAALDCGYYISFSGII 180
+ KPV++HTRSA DTI ++R + G++HCFTE E K ALD G+YIS SGI+
Sbjct 122 NQLDKPVIIHTRSAGDDTIAMLRQHRAEKCGGVIHCFTETMEFXKKALDLGFYISCSGIV 181
Query 181 SFKNAQDLRDVAKQVPLERVLIETDSPYLAPVPYRGKSNEPKYVPYVAQALSDLYGKPLE 240
+FKNA+ +R+V + VP+ER+L+ETDSPYLAPVPYRGK N+P Y V + ++ L G E
Sbjct 182 TFKNAEAIREVIRYVPMERLLVETDSPYLAPVPYRGKENQPAYTREVCEYVATLKGVSAE 241
Query 241 EIALITRQNFDNL 253
A IT QNF+ L
Sbjct 242 AFAQITTQNFERL 254
>Q8K9J1 Uncharacterized metal-dependent hydrolase BUsg_343 [Buchnera
aphidicola subsp. Schizaphis graminum (strain Sg)]
Length=264
Score = 187 bits (474), Expect = 4e-62
Identities = 102/260 (39%), Positives = 162/260 (62%), Gaps = 13/260 (5%)
Query 3 VDTHCHLTMLDLTPYQGNL-----DQALVEAREAGVSKFMSISVNLDDHIALAEISARHD 57
+D+HCH+ +++ +L ++ L +A E V KF+++S ++ + ++ + +D
Sbjct 4 IDSHCHIDQMNIDQKNDDLLHQEIEKILNKAYENHVKKFLTVSTSIQNFYKTKKLLSTYD 63
Query 58 DVGYSVGVHP--CEDAATMARATTEFLVELAQSDKVWALGETGLDYYHSDEYVDEQKACF 115
+ YS G+HP C+ L +L+ V ALGETGLDYY+S E + Q+ F
Sbjct 64 SIFYSCGIHPLYCQKEIECLNE----LKKLSYDKCVIALGETGLDYYYSFETKNLQEKFF 119
Query 116 ARHIAASKIVKKPVVVHTRSAKRDTIDIIRAEASTH--GILHCFTEDWETAKAALDCGYY 173
HI + + KP+++H+R+A +DTI I++ E + GILH FTE ++A LD G+Y
Sbjct 120 REHIRIAITLNKPIIIHSRNAIKDTIKILKEENAEKCGGILHSFTESEKSAFELLDMGFY 179
Query 174 ISFSGIISFKNAQDLRDVAKQVPLERVLIETDSPYLAPVPYRGKSNEPKYVPYVAQALSD 233
ISFSGII+FK + +L + K++PLE++LIETDSPYLAP+PYRGK N+P Y+ +A+ ++
Sbjct 180 ISFSGIITFKKSIELCNTLKKIPLEKLLIETDSPYLAPIPYRGKKNQPAYLLDIAKKIAL 239
Query 234 LYGKPLEEIALITRQNFDNL 253
+ L+E+A IT NF L
Sbjct 240 IKEISLKELAKITTNNFFTL 259
>P57436 Uncharacterized metal-dependent hydrolase BU355 [Buchnera
aphidicola subsp. Acyrthosiphon pisum (strain APS)]
Length=264
Score = 184 bits (468), Expect = 3e-61
Identities = 100/258 (39%), Positives = 153/258 (59%), Gaps = 7/258 (3%)
Query 3 VDTHCHLTMLDLTPYQGNLDQALVEAREAGVSKFMSISVNLDDHIALAEISARHDDVGYS 62
+D+HCHL L+ N++ L ++ + V F+++S + + + ++ +++ + YS
Sbjct 4 IDSHCHLDRLNYNLPLENIEDVLKKSYQNHVKNFLTVSTCISNFYNIKKLFKKYNTIFYS 63
Query 63 VGVHP--CEDAATMARATTEFLVELAQSD---KVWALGETGLDYYHSDEYVDEQKACFAR 117
GVHP C+ + E+ + V ALGETGLDYY+S + Q+ F
Sbjct 64 CGVHPLNCKKELNLFHTIENLSNEIKKLSCIKDVIALGETGLDYYYSSDTKKIQQDFFRE 123
Query 118 HIAASKIVKKPVVVHTRSAKRDTIDIIRAEASTH--GILHCFTEDWETAKAALDCGYYIS 175
HI + +KKP++VH+R+A DTI I++ E + G+LH FT D+ TA LD G+YIS
Sbjct 124 HIRVAIKLKKPIIVHSRNASEDTIKILQEENAEKCKGVLHSFTGDYNTACKLLDLGFYIS 183
Query 176 FSGIISFKNAQDLRDVAKQVPLERVLIETDSPYLAPVPYRGKSNEPKYVPYVAQALSDLY 235
SGII+FKN+ +L +++PL R+LIETDSPYL+P PYRGK N+P Y+ Y+A+ LS L
Sbjct 184 CSGIITFKNSLELCKTIRKIPLNRLLIETDSPYLSPAPYRGKGNQPAYLFYIAEYLSILK 243
Query 236 GKPLEEIALITRQNFDNL 253
+ + IT NF L
Sbjct 244 EIDIHALGHITTSNFRTL 261
>Q89AG7 Uncharacterized metal-dependent hydrolase bbp_325 [Buchnera
aphidicola subsp. Baizongia pistaciae (strain Bp)]
Length=265
Score = 177 bits (450), Expect = 2e-58
Identities = 93/250 (37%), Positives = 153/250 (61%), Gaps = 4/250 (2%)
Query 3 VDTHCHLTMLDLTPYQGNLDQALVEAREAGVSKFMSISVNLDDHIALAEISARHDDVGYS 62
+D+HCHL +L+ + L ++++ V+ +++S ++++ L + + +V S
Sbjct 4 IDSHCHLDLLNYNKIHTGIQDVLNKSKKKHVNVILTVSTSIENFCYLLKFIKGNRNVLLS 63
Query 63 VGVHPCEDAATMARATTEFLVELAQSDKVWALGETGLDYYHSDEYVDEQKACFARHIAAS 122
G+HP L + + ++KV A+GETGLDYY +++ Q+ F HI S
Sbjct 64 CGIHPHYIPENKNEILK--LKKYSNNEKVVAIGETGLDYYRNNDNKKLQQILFREHIKTS 121
Query 123 KIVKKPVVVHTRSAKRDTIDIIRAEASTH--GILHCFTEDWETAKAALDCGYYISFSGII 180
+KKP+++HTR++ DTI+I++ E S G+LH FTED +A+ L+ G+YISFSGI+
Sbjct 122 ITLKKPLLIHTRNSINDTINILKEENSKQCIGVLHSFTEDMHSARILLNMGFYISFSGIV 181
Query 181 SFKNAQDLRDVAKQVPLERVLIETDSPYLAPVPYRGKSNEPKYVPYVAQALSDLYGKPLE 240
+FKN++ + + AK VP++R+LIETDSPYL+PVPYRG N+P Y+ ++ L E
Sbjct 182 TFKNSKIVHETAKFVPIDRILIETDSPYLSPVPYRGIENQPAYLYDTMLYIAQLKNMSPE 241
Query 241 EIALITRQNF 250
A+ T +NF
Sbjct 242 CFAIQTTKNF 251
>P37545 Uncharacterized metal-dependent hydrolase YabD [Bacillus
subtilis (strain 168)]
Length=255
Score = 172 bits (436), Expect = 1e-56
Identities = 92/252 (37%), Positives = 142/252 (56%), Gaps = 6/252 (2%)
Query 4 DTHCHLTMLDLTPYQGNLDQALVEAREAGVSKFMSISVNLDDHIALAEISARHDDVGYSV 63
DTH HL + Y +L++ + A+ V + + + + E+ +D + ++
Sbjct 4 DTHAHL---NAEQYDTDLEEVIERAKAEKVERIVVVGFDRPTITRAMEMIEEYDFIYAAI 60
Query 64 GVHPCEDAATMARATTEFLVELAQSDKVWALGETGLDYYHSDEYVDEQKACFARHIAASK 123
G HP DA M ++ EL+ +KV A+GE GLDY+ D QK F IA +K
Sbjct 61 GWHPV-DAIDMTEEDLAWIKELSAHEKVVAIGEMGLDYHWDKSPKDIQKEVFRNQIALAK 119
Query 124 IVKKPVVVHTRSAKRDTIDIIRAEAS--THGILHCFTEDWETAKAALDCGYYISFSGIIS 181
V P+++H R A D + I++ E + GI+HCFT E A+ + +Y+SF G ++
Sbjct 120 EVNLPIIIHNRDATEDVVTILKEEGAEAVGGIMHCFTGSAEVARECMKMNFYLSFGGPVT 179
Query 182 FKNAQDLRDVAKQVPLERVLIETDSPYLAPVPYRGKSNEPKYVPYVAQALSDLYGKPLEE 241
FKNA+ ++V K++P +R+LIETD P+L P P+RGK NEP YV YVA+ +++L EE
Sbjct 180 FKNAKKPKEVVKEIPNDRLLIETDCPFLTPHPFRGKRNEPSYVKYVAEQIAELKEMTFEE 239
Query 242 IALITRQNFDNL 253
IA IT +N L
Sbjct 240 IASITTENAKRL 251
>P73335 D-aminoacyl-tRNA deacylase [Synechocystis sp. (strain
PCC 6803 / Kazusa)]
Length=261
Score = 155 bits (392), Expect = 7e-50
Identities = 90/255 (35%), Positives = 143/255 (56%), Gaps = 8/255 (3%)
Query 3 VDTHCHLTMLDLTPYQGNLDQALVEAREAGVSKFMSISVNLDDHIALAEISARHDDVGYS 62
VDTH H+ + + +LDQ R+AGV + + V + + ++ R ++ ++
Sbjct 4 VDTHVHI---NFDVFAADLDQLQHRWRQAGVVQLVHSCVKPQEFDQIQSLADRFPELFFA 60
Query 63 VGVHPCEDAATMARATTEFLVELAQSDKVWALGETGLDYYHSDEYVDEQKACFARHIAAS 122
VG+HP + + L D+V A+GE GLD++ +D D Q F +A +
Sbjct 61 VGLHPLDAEDWQDNTAGQILAYAKADDRVVAIGEMGLDFFKADNR-DHQIEVFRAQLAIA 119
Query 123 KIVKKPVVVHTRSAK---RDTIDIIRAEAS-THGILHCFTEDWETAKAALDCGYYISFSG 178
+ + KPV++H R A R + +AE+ G++HC+ E + LD G+YISFSG
Sbjct 120 RELNKPVIIHCRDAAQTMRQVLTDFQAESGPVAGVMHCWGGTPEETQWFLDLGFYISFSG 179
Query 179 IISFKNAQDLRDVAKQVPLERVLIETDSPYLAPVPYRGKSNEPKYVPYVAQALSDLYGKP 238
++FK A+ ++ A+ VP +R+L+ETD P+LAPVP RGK NEP +V +VA+A++ L P
Sbjct 180 TVTFKKAEGIQASAQMVPPDRLLVETDCPFLAPVPQRGKRNEPAFVRHVAEAIAALRHVP 239
Query 239 LEEIALITRQNFDNL 253
LE +A T N NL
Sbjct 240 LETLAQQTTTNARNL 254
>O08343 Uncharacterized metal-dependent hydrolase TatD [Mycobacterium
tuberculosis (strain ATCC 25618 / H37Rv)]
Length=264
Score = 152 bits (385), Expect = 8e-49
Identities = 93/256 (36%), Positives = 146/256 (57%), Gaps = 14/256 (5%)
Query 3 VDTHCHLTMLDLTPYQGNLDQALVE-AREAGVSKFMSISVNLDDHIALAEISARHDDVGY 61
VD H HL + ++LVE A AGV+ ++++ +L+ + + V
Sbjct 2 VDAHTHLDACGAR--DADTVRSLVERAAAAGVTAVVTVADDLESARWVTRAAEWDRRVYA 59
Query 62 SVGVHPCEDAATMARATTEFLVELAQSDKVWALGETGLDYYH-------SDEYVDEQKAC 114
+V +HP A A E L L +V A+GETG+D Y ++ +V Q+
Sbjct 60 AVALHPTRADALTDAARAE-LERLVAHPRVVAVGETGIDMYWPGRLDGCAEPHV--QREA 116
Query 115 FARHIAASKIVKKPVVVHTRSAKRDTIDIIRAEASTHG-ILHCFTEDWETAKAALDCGYY 173
FA HI +K KP+++H R A RD +D++RAE + ILHCF+ D A+ +D G+
Sbjct 117 FAWHIDLAKRTGKPLMIHNRQADRDVLDVLRAEGAPDTVILHCFSSDAAMARTCVDAGWL 176
Query 174 ISFSGIISFKNAQDLRDVAKQVPLERVLIETDSPYLAPVPYRGKSNEPKYVPYVAQALSD 233
+S SG +SF+ A++LR+ +P+E++L+ETD+PYL P P+RG +NEP +PY +AL++
Sbjct 177 LSLSGTVSFRTARELREAVPLMPVEQLLVETDAPYLTPHPHRGLANEPYCLPYTVRALAE 236
Query 234 LYGKPLEEIALITRQN 249
L + EE+ALIT N
Sbjct 237 LVNRRPEEVALITTSN 252
>Q9PRC8 Uncharacterized metal-dependent hydrolase UU017 [Ureaplasma
parvum serovar 3 (strain ATCC 700970)]
Length=265
Score = 136 bits (342), Expect = 2e-42
Identities = 86/262 (33%), Positives = 139/262 (53%), Gaps = 12/262 (5%)
Query 3 VDTHCHLTMLDLTPYQGNLDQALVEAREAGVSKFMSISVNLDDHIALAEISARHDDVGYS 62
+DTH H ++ P D + + E G+ + + V+L + + + + S
Sbjct 8 IDTHTHP---NIEPLIEEFDDIIFKCYEQGIGLNI-VGVDLKTSQTAIQQAKKFKFLTCS 63
Query 63 VGVHPCEDAATMARATTEFLVELAQS-DKVWALGETGLDYYHSDEYV-DEQKACFARHIA 120
V +HP D + +A++ D + +GE GLDYYH Y D QK F +HI
Sbjct 64 VAIHP-NDLHNIENDFVALEKLIAENIDYISCIGECGLDYYHEQNYDHDFQKHWFKKHIE 122
Query 121 ASKIVKKPVVVHTRSAKRDTIDIIRAEASTHGILHCFTEDWETAKAALDCGYYISFSGII 180
+K KP+++H R+A D I I++ A I+HCFT+ E A+ ++ GYYIS+ G+I
Sbjct 123 LAKKYHKPLMLHIRNAHDDAIAILKELAVQDVIIHCFTDKKEYAQQYIEMGYYISYPGVI 182
Query 181 SFK-----NAQDLRDVAKQVPLERVLIETDSPYLAPVPYRGKSNEPKYVPYVAQALSDLY 235
+FK +L + K PL+++L+ETD+PYL PVP RG++N P YV Y + +++L
Sbjct 183 TFKPTKNNQLHELYEAIKITPLDKILVETDAPYLTPVPKRGQTNYPYYVLYTSAFIANLL 242
Query 236 GKPLEEIALITRQNFDNLLAAK 257
G E++ I +N +L K
Sbjct 243 GITHEKMQKILLENSLRILNFK 264
>P78005 Uncharacterized metal-dependent hydrolase MPN_009 [Mycoplasma
pneumoniae (strain ATCC 29342 / M129 / Subtype 1)]
Length=261
Score = 119 bits (299), Expect = 4e-36
Identities = 75/250 (30%), Positives = 127/250 (51%), Gaps = 13/250 (5%)
Query 2 FVDTHCHLTMLDLTPYQGNLDQALVEAREAGVSKFMSISVNLDDHIALAEISARHDDV-G 60
+ D HCHL + P +++L R G+ K + NL + ++ +H D+
Sbjct 3 YFDAHCHL---NCEPLLEQHEKSLANFRLIGL-KANVVGTNLTNSQIAVNLAKQHPDLLK 58
Query 61 YSVGVHPCEDAATMARATTEFLVELAQSDK--VWALGETGLDYYHSDEYVDEQKACFARH 118
VG+HP + +A L +L + + + +GE G DY+++ +Y+ +Q+ F
Sbjct 59 AGVGIHPNDVQLFDLKAAQATLKKLVSTHRSFISCIGEYGFDYHYTKDYITQQEQFFLMQ 118
Query 119 IAASKIVKKPVVVHTRSAKRDTIDII-RAEASTHGILHCFTEDWETAKAALDCG-----Y 172
++ + ++H R +++ R + + HCF+ED TA L
Sbjct 119 FQLAEQYQLVHMLHVRDVHERIYEVLKRLKPKQPVVFHCFSEDTNTALKLLTLREVGLKV 178
Query 173 YISFSGIISFKNAQDLRDVAKQVPLERVLIETDSPYLAPVPYRGKSNEPKYVPYVAQALS 232
Y S GI++FKNA++L+ +P E +L ETDSPYLAPVP+RGK+N P+ V + Q ++
Sbjct 179 YFSIPGIVTFKNAKNLQAALSVIPTELLLSETDSPYLAPVPFRGKTNWPECVVHTVQTIA 238
Query 233 DLYGKPLEEI 242
D+ PL EI
Sbjct 239 DIKQVPLAEI 248
>P27859 3'-5' ssDNA/RNA exonuclease TatD [Escherichia coli (strain
K12)]
Length=260
Score = 107 bits (266), Expect = 3e-31
Identities = 68/239 (28%), Positives = 118/239 (49%), Gaps = 8/239 (3%)
Query 22 DQALVEAREAGVSKFMSISVNLDDHIALAEISARHDDVGYSVGVHPCEDAATMARATTEF 81
D + A +AGV+ + NL + +++ ++ + GVHP D++ AT E
Sbjct 18 DDVVACAFDAGVNGLLITGTNLRESQQAQKLARQYSSCWSTAGVHP-HDSSQWQAATEEA 76
Query 82 LVELAQSDKVWALGETGLDYYHSDEYVDEQKACFARHIAASKIVKKPVVVHTRSAKRDTI 141
++ELA +V A+GE GLD+ + +EQ+ F + + + PV +H R A +
Sbjct 77 IIELAAQPEVVAIGECGLDFNRNFSTPEEQERAFVAQLRIAADLNMPVFMHCRDAHERFM 136
Query 142 DIIR--AEASTHGILHCFTEDWETAKAALDCGYYISFSG-IISFKNAQDLRDVAKQVPLE 198
++ + +LHCFT E +A + G YI +G + + +LR++ +P E
Sbjct 137 TLLEPWLDKLPGAVLHCFTGTREEMQACVAHGIYIGITGWVCDERRGLELRELLPLIPAE 196
Query 199 RVLIETDSPYLAPVPYRGK----SNEPKYVPYVAQALSDLYGKPLEEIALITRQNFDNL 253
++LIETD+PYL P K NEP ++P++ Q ++ G+ +A T N L
Sbjct 197 KLLIETDAPYLLPRDLTPKPSSRRNEPAHLPHILQRIAHWRGEDAAWLAATTDANVKTL 255
>D4ICL5 3'-5' ssDNA/RNA exonuclease TatD [Erwinia amylovora (strain
ATCC 49946 / CCPPB 0273 / Ea273 / 27-3)]
Length=259
Score = 105 bits (261), Expect = 1e-30
Identities = 73/246 (30%), Positives = 124/246 (50%), Gaps = 9/246 (4%)
Query 12 LDLTPYQGNLDQALVEAREAGVSKFMSISVNLDDHIALAEISARHDDVGYSV-GVHPCED 70
L T + + D+ + AREAG+S + N + ++ +H + +S GVHP
Sbjct 8 LTSTQFAKDRDKVVKRAREAGISGMLITGTNALESQQALSLARQHANYCWSTAGVHP-HH 66
Query 71 AATMARATTEFLVELAQSDKVWALGETGLDYYHSDEYVDEQKACFARHIAASKIVKKPVV 130
A+ + T L LA+S V A+GE GLD+ + ++Q F +A + + PV
Sbjct 67 ASEWSAETAATLRRLAESPLVVAIGECGLDFNRNFSQPEQQVYAFNAQLALAAELSLPVF 126
Query 131 VHTRSAKRDTIDIIR--AEASTHGILHCFTEDWETAKAALDCGYYISFSG-IISFKNAQD 187
+H R A I I++ + +LHCFT ++ L G I +G I + Q+
Sbjct 127 LHCREAHERFITILKPWLPSLKAAVLHCFTGARAELESCLAEGLSIGITGWICDERRGQE 186
Query 188 LRDVAKQVPLERVLIETDSPYLAPVPYR----GKSNEPKYVPYVAQALSDLYGKPLEEIA 243
LR++ +P +R+L+ETD+P+L P R + NEP ++P++ Q ++ L G ++E+A
Sbjct 187 LRELVPLIPADRLLLETDAPWLLPRDMRPRPPSRRNEPCFLPHIVQQVALLRGDDVDELA 246
Query 244 LITRQN 249
T N
Sbjct 247 AQTALN 252
>P34220 Deoxyribonuclease Tat-D [Saccharomyces cerevisiae (strain
ATCC 204508 / S288c)]
Length=418
Score = 40.0 bits (92), Expect = 3e-07
Identities = 44/154 (29%), Positives = 67/154 (44%), Gaps = 43/154 (28%)
Query 93 ALGETGLDY----YHSDEYVDEQKACFARHIAAS----KIVKKPVVVHTRSA-------- 136
++GE GLDY Y S E QK F + S K+ P+ +H RSA
Sbjct 182 SIGEIGLDYDRFHYSSKEM---QKVFFEEQLKISCLNDKLSSYPLFLHMRSACDDFVQIL 238
Query 137 ---------KRDTIDIIRAEASTHG-----------ILHCFTEDWETAKAALDCGYYISF 176
+RDT + + AS+ ++H FT + L+ I F
Sbjct 239 ERFIAGFTDERDTFQLQKLGASSSSGFYKFHPDRKLVVHSFTGSAIDLQKLLNLSPNI-F 297
Query 177 SGI--ISFKNAQDLRDVAKQVPLERVLIETDSPY 208
G+ S + ++L V KQ+P ER+L+ETD+P+
Sbjct 298 IGVNGCSLRTEENLA-VVKQIPTERLLLETDAPW 330
Score = 16.9 bits (32), Expect = 6.7
Identities = 6/18 (33%), Positives = 9/18 (50%), Gaps = 0/18 (0%)
Query 102 YHSDEYVDEQKACFARHI 119
YH +YV + RH+
Sbjct 59 YHPADYVKLLERAAQRHV 76
Lambda K H a alpha
0.321 0.135 0.400 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 740890
Database: ed256b5c17ddaedde060094e4564c696.SwissProt.fasta
Posted date: May 20, 2024 3:04 AM
Number of letters in database: 4,091
Number of sequences in database: 15
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
