Comparative Genomics

ACIAD2393 / TrEMBL Alignments

BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: 3bbbf7289cff8b66190fb60455e3d879.TrEMBL.fasta
           22 sequences; 3,230 total letters



Query= ACIAD2393

Length=111
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

A0A7G2SH84 XRE family transcriptional regulator [Acinetobacter sp]    226     4e-82
A0A833PEM9 HTH cro/C1-type domain-containing protein [Acinetobact...  170     5e-60
N8XA79 HTH cro/C1-type domain-containing protein [Acinetobacter b...  168     2e-59
N9EZC9 HTH cro/C1-type domain-containing protein [Acinetobacter b...  168     2e-59
L9LW72 DNA-binding helix-turn-helix protein [Acinetobacter sp. WC...  168     2e-59
A0A1Z9YTK5 Transcriptional regulator [Acinetobacter populi]           167     4e-59
A0A240ECL4 Transcriptional regulator, contains XRE-family HTH dom...  167     8e-59
N8WUZ5 HTH cro/C1-type domain-containing protein [Acinetobacter g...  166     1e-58
A0A072D1D3 DNA-binding protein [Acinetobacter sp. ETR1]               166     1e-58
A0A6A1RQQ9 Helix-turn-helix domain-containing protein [Acinetobac...  165     5e-58
A0A1E7QYV6 Transcriptional regulator [Acinetobacter qingfengensis]    157     4e-55
A0A0Q7G1W8 DNA-binding protein [Acinetobacter sp. Root1280]           151     1e-52
Q8RNV9 Regulatory protein C.BcnI [Brevibacillus centrosporus]         46.2    1e-11
Q9XCX3 NmeSIC [Neisseria meningitidis]                                39.7    4e-09
M9LXK0 Transcriptional regulator [Paenibacillus popilliae ATCC 14...  39.3    1e-08
Q84HH7 Shikimate kinase [Aromatoleum evansii]                         38.5    7e-08
C1IZ14 HTH cro/C1-type domain-containing protein [Leuconostoc cit...  38.1    8e-08
M9LPF5 Transcriptional regulator [Paenibacillus popilliae ATCC 14...  36.6    1e-07
A0A5J6DEW6 WO-mediated killing-like protein [Wolbachia phage WO]      36.6    3e-07
A0A5J6CW53 HTH cro/C1-type domain-containing protein [Wolbachia e...  36.6    3e-07
A0A5J6CW47 Putative DNA-binding protein [Wolbachia endosymbiont o...  36.6    3e-07


>A0A7G2SH84 XRE family transcriptional regulator [Acinetobacter 
sp]
Length=110

 Score = 226 bits (575),  Expect = 4e-82
 Identities = 110/110 (100%), Positives = 110/110 (100%), Gaps = 0/110 (0%)

Query  1    MDIGRAVRFLRKRQGWTQQQLADFSHTSKSNISNLENGNQGYSPAILEYLAKAFNCSVSQ  60
            MDIGRAVRFLRKRQGWTQQQLADFSHTSKSNISNLENGNQGYSPAILEYLAKAFNCSVSQ
Sbjct  1    MDIGRAVRFLRKRQGWTQQQLADFSHTSKSNISNLENGNQGYSPAILEYLAKAFNCSVSQ  60

Query  61   IFLLAENMDNEGNLLKDWQHMPIDVLFIQLPQEVQCQLKHLIFTLIDTKK  110
            IFLLAENMDNEGNLLKDWQHMPIDVLFIQLPQEVQCQLKHLIFTLIDTKK
Sbjct  61   IFLLAENMDNEGNLLKDWQHMPIDVLFIQLPQEVQCQLKHLIFTLIDTKK  110


>A0A833PEM9 HTH cro/C1-type domain-containing protein [Acinetobacter 
bereziniae]
Length=111

 Score = 170 bits (430),  Expect = 5e-60
 Identities = 79/109 (72%), Positives = 98/109 (90%), Gaps = 0/109 (0%)

Query  1    MDIGRAVRFLRKRQGWTQQQLADFSHTSKSNISNLENGNQGYSPAILEYLAKAFNCSVSQ  60
            MDIG A+R+LRKR+GWTQQQLADFS+TSKSNISNLENGNQGYSPAIL+YLA+AFNCSV+Q
Sbjct  1    MDIGHAIRYLRKRKGWTQQQLADFSNTSKSNISNLENGNQGYSPAILQYLAEAFNCSVAQ  60

Query  61   IFLLAENMDNEGNLLKDWQHMPIDVLFIQLPQEVQCQLKHLIFTLIDTK  109
            +FLLAE++D+E N+ ++W  MPID LFIQLP+E+Q  LK LI++L+  K
Sbjct  61   LFLLAESLDDEENISENWDKMPIDALFIQLPKEIQDNLKLLIYSLVQNK  109


>N8XA79 HTH cro/C1-type domain-containing protein [Acinetobacter 
bereziniae NIPH 3]
Length=111

 Score = 168 bits (426),  Expect = 2e-59
 Identities = 78/109 (72%), Positives = 97/109 (89%), Gaps = 0/109 (0%)

Query  1    MDIGRAVRFLRKRQGWTQQQLADFSHTSKSNISNLENGNQGYSPAILEYLAKAFNCSVSQ  60
            MDIG A+R+LRKR+GWTQQQLADFS+TSKSNISNLENGNQGYSPAIL+YLA+AFNCSV+Q
Sbjct  1    MDIGHAIRYLRKRKGWTQQQLADFSNTSKSNISNLENGNQGYSPAILQYLAEAFNCSVAQ  60

Query  61   IFLLAENMDNEGNLLKDWQHMPIDVLFIQLPQEVQCQLKHLIFTLIDTK  109
            +FLLAE++D + N+ ++W  MPID LFIQLP+++Q  LK LI++LI  K
Sbjct  61   LFLLAESLDEQENVSENWDKMPIDALFIQLPKDIQDNLKQLIYSLIQNK  109


>N9EZC9 HTH cro/C1-type domain-containing protein [Acinetobacter 
bereziniae LMG 1003 = CIP 70.12]
Length=111

 Score = 168 bits (426),  Expect = 2e-59
 Identities = 78/109 (72%), Positives = 97/109 (89%), Gaps = 0/109 (0%)

Query  1    MDIGRAVRFLRKRQGWTQQQLADFSHTSKSNISNLENGNQGYSPAILEYLAKAFNCSVSQ  60
            MDIG A+R+LRKR+GWTQQQLADFS+TSKSNISNLENGNQGYSPAIL+YLA+AFNCSV+Q
Sbjct  1    MDIGHAIRYLRKRKGWTQQQLADFSNTSKSNISNLENGNQGYSPAILQYLAEAFNCSVAQ  60

Query  61   IFLLAENMDNEGNLLKDWQHMPIDVLFIQLPQEVQCQLKHLIFTLIDTK  109
            +FLLAE++D + N+ ++W  MPID LFIQLP+++Q  LK LI++LI  K
Sbjct  61   LFLLAESLDEQENVSENWDKMPIDALFIQLPKDIQDNLKQLIYSLIQNK  109


>L9LW72 DNA-binding helix-turn-helix protein [Acinetobacter sp. 
WC-743]
Length=111

 Score = 168 bits (426),  Expect = 2e-59
 Identities = 78/109 (72%), Positives = 97/109 (89%), Gaps = 0/109 (0%)

Query  1    MDIGRAVRFLRKRQGWTQQQLADFSHTSKSNISNLENGNQGYSPAILEYLAKAFNCSVSQ  60
            MDIG A+R+LRKR+GWTQQQLADFS+TSKSNISNLENGNQGYSPAIL+YLA+AFNCSV+Q
Sbjct  1    MDIGHAIRYLRKRKGWTQQQLADFSNTSKSNISNLENGNQGYSPAILQYLAEAFNCSVAQ  60

Query  61   IFLLAENMDNEGNLLKDWQHMPIDVLFIQLPQEVQCQLKHLIFTLIDTK  109
            +FLLAE++D + N+ ++W  MPID LFIQLP+++Q  LK LI++LI  K
Sbjct  61   LFLLAESLDEQENVSENWDKMPIDALFIQLPKDIQDNLKQLIYSLIQNK  109


>A0A1Z9YTK5 Transcriptional regulator [Acinetobacter populi]
Length=109

 Score = 167 bits (424),  Expect = 4e-59
 Identities = 78/106 (74%), Positives = 96/106 (91%), Gaps = 0/106 (0%)

Query  1    MDIGRAVRFLRKRQGWTQQQLADFSHTSKSNISNLENGNQGYSPAILEYLAKAFNCSVSQ  60
            M+IG+AVR+LRK++GWTQQQLAD+S+TSKSNISNLENGNQGYSPAILEYLA+AF+CSV+Q
Sbjct  1    MNIGQAVRYLRKKKGWTQQQLADYSNTSKSNISNLENGNQGYSPAILEYLARAFHCSVAQ  60

Query  61   IFLLAENMDNEGNLLKDWQHMPIDVLFIQLPQEVQCQLKHLIFTLI  106
            +FLLAE +D EG + KDWQHMPID LF+QLP++VQ  L+ LI  L+
Sbjct  61   LFLLAEYLDEEGKVTKDWQHMPIDTLFMQLPKDVQDNLRQLIHLLL  106


>A0A240ECL4 Transcriptional regulator, contains XRE-family HTH 
domain [Acinetobacter puyangensis]
Length=110

 Score = 167 bits (422),  Expect = 8e-59
 Identities = 77/106 (73%), Positives = 96/106 (91%), Gaps = 0/106 (0%)

Query  1    MDIGRAVRFLRKRQGWTQQQLADFSHTSKSNISNLENGNQGYSPAILEYLAKAFNCSVSQ  60
            M+IG AVR+LRK++GWTQQQLAD+S+TSKSNISNLENGNQGYSPAILEYLA+AF+CSV+Q
Sbjct  1    MNIGPAVRYLRKKKGWTQQQLADYSNTSKSNISNLENGNQGYSPAILEYLARAFHCSVAQ  60

Query  61   IFLLAENMDNEGNLLKDWQHMPIDVLFIQLPQEVQCQLKHLIFTLI  106
            +FLLAE +D EG + +DWQHMPID LF+QLP++VQ  L+HL+  L+
Sbjct  61   LFLLAEYLDEEGRITRDWQHMPIDTLFMQLPKDVQDNLRHLMQILL  106


>N8WUZ5 HTH cro/C1-type domain-containing protein [Acinetobacter 
guillouiae NIPH 991]
Length=110

 Score = 166 bits (421),  Expect = 1e-58
 Identities = 76/109 (70%), Positives = 98/109 (90%), Gaps = 0/109 (0%)

Query  1    MDIGRAVRFLRKRQGWTQQQLADFSHTSKSNISNLENGNQGYSPAILEYLAKAFNCSVSQ  60
            M+IG A+R+LRKR+GWTQQQLADFS+TSKSNISNLENGNQGYSPAIL+YLA+AFNC+V+Q
Sbjct  1    MNIGHAIRYLRKRKGWTQQQLADFSNTSKSNISNLENGNQGYSPAILQYLAEAFNCTVAQ  60

Query  61   IFLLAENMDNEGNLLKDWQHMPIDVLFIQLPQEVQCQLKHLIFTLIDTK  109
            +FLLAE++D++ N+ ++W  MPID LFIQLP+++Q  LK LI++LI  K
Sbjct  61   LFLLAESLDDDENIAENWDQMPIDALFIQLPKDIQDNLKQLIYSLIKNK  109


>A0A072D1D3 DNA-binding protein [Acinetobacter sp. ETR1]
Length=110

 Score = 166 bits (421),  Expect = 1e-58
 Identities = 76/109 (70%), Positives = 98/109 (90%), Gaps = 0/109 (0%)

Query  1    MDIGRAVRFLRKRQGWTQQQLADFSHTSKSNISNLENGNQGYSPAILEYLAKAFNCSVSQ  60
            M+IG A+R+LRKR+GWTQQQLADFS+TSKSNISNLENGNQGYSPAIL+YLA+AFNC+V+Q
Sbjct  1    MNIGHAIRYLRKRKGWTQQQLADFSNTSKSNISNLENGNQGYSPAILQYLAEAFNCTVAQ  60

Query  61   IFLLAENMDNEGNLLKDWQHMPIDVLFIQLPQEVQCQLKHLIFTLIDTK  109
            +FLLAE++D++ N+ ++W  MPID LFIQLP+++Q  LK LI++LI  K
Sbjct  61   LFLLAESLDDDENIAENWDQMPIDALFIQLPKDIQDNLKQLIYSLIKNK  109


>A0A6A1RQQ9 Helix-turn-helix domain-containing protein [Acinetobacter 
guillouiae]
Length=110

 Score = 165 bits (417),  Expect = 5e-58
 Identities = 76/109 (70%), Positives = 97/109 (89%), Gaps = 0/109 (0%)

Query  1    MDIGRAVRFLRKRQGWTQQQLADFSHTSKSNISNLENGNQGYSPAILEYLAKAFNCSVSQ  60
            M+IG A+R+LRKR+GWTQQQLADFS+TSKSNISNLENGNQGYSPAIL+YLA+AFNC+V+Q
Sbjct  1    MNIGHAIRYLRKRKGWTQQQLADFSNTSKSNISNLENGNQGYSPAILQYLAEAFNCTVAQ  60

Query  61   IFLLAENMDNEGNLLKDWQHMPIDVLFIQLPQEVQCQLKHLIFTLIDTK  109
            +FLLAE++D++ N+ ++W  MPID LFIQLP+++Q  LK LI +LI  K
Sbjct  61   LFLLAESLDDDENIAENWDQMPIDALFIQLPKDIQDNLKQLIHSLIKNK  109


>A0A1E7QYV6 Transcriptional regulator [Acinetobacter qingfengensis]
Length=111

 Score = 157 bits (398),  Expect = 4e-55
 Identities = 75/106 (71%), Positives = 93/106 (88%), Gaps = 0/106 (0%)

Query  1    MDIGRAVRFLRKRQGWTQQQLADFSHTSKSNISNLENGNQGYSPAILEYLAKAFNCSVSQ  60
            M+IG AVRFLRK++GWTQQQLADFSHTSK NISNLENGNQGYSPAILEYLA++ +CSV+Q
Sbjct  1    MNIGNAVRFLRKKKGWTQQQLADFSHTSKGNISNLENGNQGYSPAILEYLAQSLDCSVAQ  60

Query  61   IFLLAENMDNEGNLLKDWQHMPIDVLFIQLPQEVQCQLKHLIFTLI  106
            IFLLAE+++ +G    +W++MPID LFIQLP+EVQ  L++ I TL+
Sbjct  61   IFLLAEHLNEKGETPIEWEYMPIDALFIQLPKEVQDSLRNHICTLL  106


>A0A0Q7G1W8 DNA-binding protein [Acinetobacter sp. Root1280]
Length=110

 Score = 151 bits (382),  Expect = 1e-52
 Identities = 71/109 (65%), Positives = 93/109 (85%), Gaps = 0/109 (0%)

Query  1    MDIGRAVRFLRKRQGWTQQQLADFSHTSKSNISNLENGNQGYSPAILEYLAKAFNCSVSQ  60
            M+IG A+R+LRKR+GWTQQQLADFS+TSKSNISNLENGNQGYSPAIL+YLA+AFN +V+Q
Sbjct  1    MNIGHAIRYLRKRKGWTQQQLADFSNTSKSNISNLENGNQGYSPAILQYLAEAFNYTVAQ  60

Query  61   IFLLAENMDNEGNLLKDWQHMPIDVLFIQLPQEVQCQLKHLIFTLIDTK  109
            +FLLAE+ D++ ++ ++W  +PID LFI LP+++Q  LK  I +LI  K
Sbjct  61   LFLLAESFDDDESIAENWDQIPIDGLFIPLPKDIQDNLKQFIHSLIKNK  109


>Q8RNV9 Regulatory protein C.BcnI [Brevibacillus centrosporus]
Length=74

 Score = 46.2 bits (108),  Expect = 1e-11
 Identities = 22/63 (35%), Positives = 41/63 (65%), Gaps = 0/63 (0%)

Query  4   GRAVRFLRKRQGWTQQQLADFSHTSKSNISNLENGNQGYSPAILEYLAKAFNCSVSQIFL  63
           GR VR +R+++G TQ++LA+ +   ++ IS+LE G +  S   +E +A+A +  + Q+F+
Sbjct  9   GRKVRIIREQKGLTQEKLAEEAGLHRTYISSLERGERSISLNNIEKIARALDVEIYQLFI  68

Query  64  LAE  66
             E
Sbjct  69  FRE  71


>Q9XCX3 NmeSIC [Neisseria meningitidis]
Length=71

 Score = 39.7 bits (91),  Expect = 4e-09
 Identities = 17/61 (28%), Positives = 37/61 (61%), Gaps = 0/61 (0%)

Query  1   MDIGRAVRFLRKRQGWTQQQLADFSHTSKSNISNLENGNQGYSPAILEYLAKAFNCSVSQ  60
           ++ G+ V+  R   GW+Q++LA+     ++ I ++E G +  S   +  LAK+F+ ++S+
Sbjct  6   VEFGKRVKHYRLLNGWSQEELAEKVGLHRTYIGSVERGERNISLLNISLLAKSFSINISE  65

Query  61  I  61
           +
Sbjct  66  L  66


>M9LXK0 Transcriptional regulator [Paenibacillus popilliae ATCC 
14706]
Length=111

 Score = 39.3 bits (90),  Expect = 1e-08
 Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 0/56 (0%)

Query  3   IGRAVRFLRKRQGWTQQQLADFSHTSKSNISNLENGNQGYSPAILEYLAKAFNCSV  58
           IG  +R  RK +G TQ+QLA+   T+ S I  +E G        LE +A+A N S+
Sbjct  9   IGNNIRQRRKLKGLTQEQLAELVGTNFSYIGKMERGEHNIKIKTLEKVAEALNVSL  64


>Q84HH7 Shikimate kinase [Aromatoleum evansii]
Length=300

 Score = 38.5 bits (88),  Expect = 7e-08
 Identities = 23/68 (34%), Positives = 42/68 (62%), Gaps = 2/68 (3%)

Query  3   IGRAVRFLRKRQGWTQQQLADFSHTSKSNISNLENGNQGYSPAILEYLAKAFNCSVSQIF  62
           +G+ VR +R R+G T++ +A  +  S+ ++++LE G+   S  +L  +A+A N  VS I 
Sbjct  29  LGKRVREIRDRRGMTRKLVAREAGVSERHLAHLEGGDGNVSIVLLHNIARALN--VSLIE  86

Query  63  LLAENMDN  70
           LLA   ++
Sbjct  87  LLAPETED  94


>C1IZ14 HTH cro/C1-type domain-containing protein [Leuconostoc 
citreum]
Length=204

 Score = 38.1 bits (87),  Expect = 8e-08
 Identities = 25/78 (32%), Positives = 41/78 (53%), Gaps = 2/78 (3%)

Query  10  LRKRQGWTQQQLADFSHTSKSNISNLENGNQGYSPAILEYLAKAFNCSVSQIFLLAENMD  69
           LRK+ G TQQ+LAD S+ +   +  LE G +  S + L  +A A +  +S +F   E  +
Sbjct  9   LRKQHGLTQQELADKSYVTIRTVQRLEAG-EDVSLSSLSAIANALSVPISGLFDDIEQKE  67

Query  70  NEGNLLKDWQHMPIDVLF  87
            E  +L D+    +  L+
Sbjct  68  KEQEIL-DYSQQQVSQLY  84


>M9LPF5 Transcriptional regulator [Paenibacillus popilliae ATCC 
14706]
Length=110

 Score = 36.6 bits (83),  Expect = 1e-07
 Identities = 21/60 (35%), Positives = 31/60 (52%), Gaps = 0/60 (0%)

Query  3   IGRAVRFLRKRQGWTQQQLADFSHTSKSNISNLENGNQGYSPAILEYLAKAFNCSVSQIF  62
           IG  +R  RK +  TQ QLA+   ++ S I  +E G Q  +   LE +A+    SV  +F
Sbjct  9   IGLKIREFRKLRNLTQDQLAEAIDSTGSYIGRIERGEQNVTLHTLEKVAETLQISVFDLF  68


>A0A5J6DEW6 WO-mediated killing-like protein [Wolbachia phage 
WO]
Length=305

 Score = 36.6 bits (83),  Expect = 3e-07
 Identities = 21/84 (25%), Positives = 45/84 (54%), Gaps = 5/84 (6%)

Query  3    IGRAVRFLRKRQGWTQQQLADFSHTSKSNISNLENGNQGYSPAILEYLAKAFNCSVSQIF  62
            IG+ ++  R  +G+TQ+ LA+   T++  ISN E G        L  +A+  + ++  + 
Sbjct  163  IGKKIKEWRIVRGYTQKDLAEKMSTTRDEISNYEQGRVAIPLEKLYAIAETLSINIMDLL  222

Query  63   LLAENMDNE-----GNLLKDWQHM  81
             L E+ D++      NL+++++ +
Sbjct  223  ELTEDADDKVENELPNLIEEYKEI  246


 Score = 23.1 bits (48),  Expect = 0.015
 Identities = 18/84 (21%), Positives = 40/84 (48%), Gaps = 7/84 (8%)

Query  3   IGRAVRFLRKRQGWTQQQLADFSHTSKSNISNLENGNQGYSPAILEYLAKAFNCSVSQIF  62
           I + VR  R ++G+TQ+ LA     +   +   E G +  S   L  +A+  +  +  + 
Sbjct  10  IAQKVRSWRLKRGYTQKDLAGKIGVTYQIVLQYEKGTRKISIEKLYAIAEVLSVGIIDLI  69

Query  63  LLAEN---MDNEG----NLLKDWQ  79
            ++     +++EG    NL++ ++
Sbjct  70  PVSNEKICLEDEGEEILNLIRKYK  93


>A0A5J6CW53 HTH cro/C1-type domain-containing protein [Wolbachia 
endosymbiont of Drosophila innubila]
Length=312

 Score = 36.6 bits (83),  Expect = 3e-07
 Identities = 21/84 (25%), Positives = 45/84 (54%), Gaps = 5/84 (6%)

Query  3    IGRAVRFLRKRQGWTQQQLADFSHTSKSNISNLENGNQGYSPAILEYLAKAFNCSVSQIF  62
            IG+ ++  R  +G+TQ+ LA+   T++  ISN E G        L  +A+  + ++  + 
Sbjct  169  IGKKIKEWRIVRGYTQKDLAEKMSTTRDEISNYEQGRVAIPLEKLYAIAETLSINIMDLL  228

Query  63   LLAENMDNE-----GNLLKDWQHM  81
             L E+ D++      NL+++++ +
Sbjct  229  ELTEDADDKVENELPNLIEEYKEI  252


 Score = 24.3 bits (51),  Expect = 0.006
 Identities = 21/84 (25%), Positives = 40/84 (48%), Gaps = 7/84 (8%)

Query  3   IGRAVRFLRKRQGWTQQQLADFSHTSKSNISNLENGNQGYSPAILEYLAKAFNCSVSQIF  62
           IG+ VR  R  + +TQ+ LA     +   +   E G +  S   L  +A+A + S+  + 
Sbjct  16  IGQEVRNRRLAKRYTQKDLAGKIGVTYQIVLQYEKGTRKISIEKLYAIAEALSVSIVDLI  75

Query  63  ------LLAENMDNE-GNLLKDWQ  79
                 +  EN + E  NL+++++
Sbjct  76  PVSNEKIYLENKEEEILNLIREYK  99


>A0A5J6CW47 Putative DNA-binding protein [Wolbachia endosymbiont 
of Drosophila borealis]
Length=312

 Score = 36.6 bits (83),  Expect = 3e-07
 Identities = 21/84 (25%), Positives = 45/84 (54%), Gaps = 5/84 (6%)

Query  3    IGRAVRFLRKRQGWTQQQLADFSHTSKSNISNLENGNQGYSPAILEYLAKAFNCSVSQIF  62
            IG+ ++  R  +G+TQ+ LA+   T++  ISN E G        L  +A+  + ++  + 
Sbjct  169  IGKKIKEWRIVRGYTQKDLAEKMSTTRDEISNYEQGRVAIPLEKLYAIAETLSINIMDLL  228

Query  63   LLAENMDNE-----GNLLKDWQHM  81
             L E+ D++      NL+++++ +
Sbjct  229  ELTEDADDKVENELPNLIEEYKEI  252


 Score = 24.3 bits (51),  Expect = 0.006
 Identities = 21/84 (25%), Positives = 40/84 (48%), Gaps = 7/84 (8%)

Query  3   IGRAVRFLRKRQGWTQQQLADFSHTSKSNISNLENGNQGYSPAILEYLAKAFNCSVSQIF  62
           IG+ VR  R  + +TQ+ LA     +   +   E G +  S   L  +A+A + S+  + 
Sbjct  16  IGQEVRNRRLAKRYTQKDLAGKIGVTYQIVLQYEKGTRKISIEKLYAIAEALSVSIVDLI  75

Query  63  ------LLAENMDNE-GNLLKDWQ  79
                 +  EN + E  NL+++++
Sbjct  76  PVSNEKIYLENKEEEILNLIREYK  99



Lambda      K        H        a         alpha
   0.327    0.139    0.423    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 195312


  Database: 3bbbf7289cff8b66190fb60455e3d879.TrEMBL.fasta
    Posted date:  May 31, 2024  10:40 AM
  Number of letters in database: 3,230
  Number of sequences in database:  22



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40