BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: 574c18822340bab289b22e117d785a63.TrEMBL.fasta
           1 sequences; 56 total letters



Query= ACIAD2399

Length=57
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

Q6F9T9 Uncharacterized protein [Acinetobacter baylyi (strain ATCC...  121     5e-44


>Q6F9T9 Uncharacterized protein [Acinetobacter baylyi (strain 
ATCC 33305 / BD413 / ADP1)]
Length=56

 Score = 121 bits (303),  Expect = 5e-44
 Identities = 55/56 (98%), Positives = 56/56 (100%), Gaps = 0/56 (0%)

Query  1   LMDHWNLQLAQKILLAWLFFVALAFTHPFGFNSIITCKNDGSYNPNLVIQFDLNSY  56
           +MDHWNLQLAQKILLAWLFFVALAFTHPFGFNSIITCKNDGSYNPNLVIQFDLNSY
Sbjct  1   MMDHWNLQLAQKILLAWLFFVALAFTHPFGFNSIITCKNDGSYNPNLVIQFDLNSY  56



Lambda      K        H        a         alpha
   0.339    0.148    0.515    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 2862


  Database: 574c18822340bab289b22e117d785a63.TrEMBL.fasta
    Posted date:  May 9, 2024  9:44 PM
  Number of letters in database: 56
  Number of sequences in database:  1



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40