BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 1b6e53cfacb58b1c22a08c0a32659179.SwissProt.fasta
22 sequences; 7,888 total letters
Query= ACIAD2434
Length=359
Score E
Sequences producing significant alignments: (Bits) Value
A5WDJ3 Alanine racemase [Psychrobacter sp. (strain PRwf-1)] 319 1e-110
Q5ZXJ2 Alanine racemase [Legionella pneumophila subsp. pneumophil... 284 3e-97
Q5X709 Alanine racemase [Legionella pneumophila (strain Paris)] 284 3e-97
A5IGG9 Alanine racemase [Legionella pneumophila (strain Corby)] 284 4e-97
Q5WYG1 Alanine racemase [Legionella pneumophila (strain Lens)] 281 3e-96
Q1H1N8 Alanine racemase [Methylobacillus flagellatus (strain KT /... 261 2e-88
Q9KUY6 Alanine racemase [Vibrio cholerae serotype O1 (strain ATCC... 260 7e-88
B7VI70 Alanine racemase [Vibrio atlanticus (strain LGP32)] 259 3e-87
B6ELK6 Alanine racemase [Aliivibrio salmonicida (strain LFI1238)] 256 4e-86
Q3V7N2 Alanine racemase [Pectobacterium atrosepticum (strain SCRI... 254 1e-85
Q8X4I9 Alanine racemase, catabolic [Escherichia coli O157:H7] 254 2e-85
P29012 Alanine racemase, catabolic [Escherichia coli (strain K12)] 251 2e-84
P0A1A3 Alanine racemase, biosynthetic [Salmonella typhimurium (st... 241 2e-80
Q93HP9 Alanine racemase, biosynthetic [Shigella sonnei] 239 9e-80
P0A6B5 Alanine racemase, biosynthetic [Shigella flexneri] 238 5e-79
P0A6B6 Alanine racemase, biosynthetic [Shigella boydii] 238 5e-79
P0A6B4 Alanine racemase, biosynthetic [Escherichia coli (strain K... 238 5e-79
Q932V0 Alanine racemase, biosynthetic [Shigella dysenteriae] 238 5e-79
B9WZ64 Alanine racemase [Pseudomonas taetrolens] 237 6e-79
O30746 Alanine racemase, catabolic [Klebsiella aerogenes] 237 9e-79
P06191 Alanine racemase, catabolic [Salmonella typhimurium (strai... 235 3e-78
Q9HTQ2 Alanine racemase, catabolic [Pseudomonas aeruginosa (strai... 235 4e-78
>A5WDJ3 Alanine racemase [Psychrobacter sp. (strain PRwf-1)]
Length=374
Score = 319 bits (817), Expect = 1e-110
Identities = 170/374 (45%), Positives = 236/374 (63%), Gaps = 17/374 (5%)
Query 1 VRHATVYIDRQALRYNLNRVKQLAPHA-KIVSMVKANAYGHGIKDCLAALETTDSFGVAC 59
+R A++ +D +AL +NLN V P K+++MVKA+AYGHGI CL AL+ D GVAC
Sbjct 1 MRSASIILDSKALTHNLNCVIDTVPDTTKVLAMVKADAYGHGIAHCLPALKDADGLGVAC 60
Query 60 LAEALEIRDEGYTQSITLIEGVFSQDEMPIVIEKNLECVVHHAQQIKWLLEYKTQYITQK 119
EA IR+ G+ + + LIEGVFS+ E IE + ++HH Q++W L + +
Sbjct 61 FTEAQHIRELGWDKILVLIEGVFSETEWQQSIEAQCQSIIHHQDQVQWALNHLPPENSPC 120
Query 120 LKVWIKLNSGMNRLGFKPDEIIEVIQQLQHQGFHCVLTMHFANADVPDHPMNQRQIDQ-- 177
VW+KLN+GMNRLGF+ DE+ +V Q L G+ +LT HFANAD P+HP N +QID
Sbjct 121 RTVWLKLNTGMNRLGFESDELGDVAQSLVDAGYELILTSHFANADAPNHPSNAKQIDTFT 180
Query 178 --LITIKTACAP-IEISCCNSAAIFNWPELHFDYVRPGIMLYGASPFAEQNIHQLDLKPV 234
L ++ P I+ S CNSA I N+ HFD+VRPGIMLYG+SP + L LKPV
Sbjct 181 QALQQLREQVDPSIKASLCNSAGILNFKACHFDWVRPGIMLYGSSPVEGVSAQMLKLKPV 240
Query 235 MRFTAHIMALNTIKAGEHIGYGSLYTAKTDMTVAIVSIGYGDGYPRAFIAQNFVAL---- 290
M F A +MA++ I AG +GYGS + A + IVSIGYGDGYPR +V++
Sbjct 241 MSFKASLMAIHNIAAGTSVGYGSRFVANRPIVKGIVSIGYGDGYPRVVDGSAWVSVQLAG 300
Query 291 --GQQLFPIVGRVSMDMLAIDVTD-RDIAIDTEIELWGHTRL----VDEVASANGTIGYE 343
P++GRV+MDM+AID+TD + + +++ LWG L VDE+A + T+GYE
Sbjct 301 EHSSYKCPVIGRVAMDMIAIDLTDVPNPKVGSQVMLWGDPELGAPSVDEIAESAHTLGYE 360
Query 344 LLCRLSNRPIRKVI 357
LLCR++ RP+R+V+
Sbjct 361 LLCRVTQRPLREVL 374
>Q5ZXJ2 Alanine racemase [Legionella pneumophila subsp. pneumophila
(strain Philadelphia 1 / ATCC 33152 / DSM 7513)]
Length=357
Score = 284 bits (727), Expect = 3e-97
Identities = 159/355 (45%), Positives = 220/355 (62%), Gaps = 9/355 (3%)
Query 2 RHATVYIDRQALRYNLNRVKQLAPHAKIVSMVKANAYGHGIKDCLAALE-TTDSFGVACL 60
R + I+ AL +NL+++K LAP K+++MVKANAYG G+++ L+ ++FGVACL
Sbjct 3 RPTRLVIEPSALLHNLSQIKHLAPGKKVIAMVKANAYGCGVREVAPVLDGRIEAFGVACL 62
Query 61 AEALEIRDEGYTQSITLIEGVFSQDEMPIVIEKNLECVVHHAQQIKWLLEYKTQYITQKL 120
EAL IR G L +GVFS DE+ + +E + CV+HHAQQ++WL++ Y +
Sbjct 63 EEALAIRALGVETPCILFQGVFSSDELSVAVENDFACVLHHAQQLEWLIKTPLPY---PI 119
Query 121 KVWIKLNSGMNRLGFKPDEIIEVIQQLQHQGF---HCVLTMHFANADVPDHPMNQRQIDQ 177
KVW+K+N+GM+RLGFK E+ +V+ LQ + L H A AD P P NQ+QI
Sbjct 120 KVWVKVNTGMHRLGFKIHELQKVMGALQTCTWVDKSIGLMTHLACADEPHRPENQQQISL 179
Query 178 LITIKTACAPIEISCCNSAAIFNWPELHFDYVRPGIMLYGASPFAEQNIHQLDLKPVMRF 237
I + S NSAAI ++P+ D VRPGIMLYG SPFA QN H L L PVMRF
Sbjct 180 FQEISIPGFR-QRSIANSAAIISFPDSQADVVRPGIMLYGVSPFANQNAHDLGLIPVMRF 238
Query 238 TAHIMALNTIKAGEHIGYGSLYTAKTDMTVAIVSIGYGDGYPRAFIAQNFVALGQQLFPI 297
+ I A++ + +GYG + + + +V+ GYGDGYPR + V + + I
Sbjct 239 MSAISAIHDNPSFAQVGYGGTWKSDKPSRIGVVAAGYGDGYPRHISEKTPVWVRGREVSI 298
Query 298 VGRVSMDMLAIDVTDR-DIAIDTEIELWGHTRLVDEVASANGTIGYELLCRLSNR 351
VGRVSMDML ID+T+ DI I E+ELWG LV+ +A + GT+GYELLC++S R
Sbjct 299 VGRVSMDMLTIDLTEHPDIEIGDEVELWGTHVLVERIAKSAGTVGYELLCQISER 353
>Q5X709 Alanine racemase [Legionella pneumophila (strain Paris)]
Length=357
Score = 284 bits (727), Expect = 3e-97
Identities = 159/355 (45%), Positives = 220/355 (62%), Gaps = 9/355 (3%)
Query 2 RHATVYIDRQALRYNLNRVKQLAPHAKIVSMVKANAYGHGIKDCLAALE-TTDSFGVACL 60
R + I+ AL +NL+++K LAP K+++MVKANAYG G+++ L+ ++FGVACL
Sbjct 3 RPTRLVIEPSALLHNLSQIKHLAPGKKVIAMVKANAYGCGVREVAPVLDGRIEAFGVACL 62
Query 61 AEALEIRDEGYTQSITLIEGVFSQDEMPIVIEKNLECVVHHAQQIKWLLEYKTQYITQKL 120
EAL IR G L +GVFS DE+ + +E + CV+HHAQQ++WL++ Y +
Sbjct 63 EEALAIRALGVETPCILFQGVFSSDELSVAVENDFACVLHHAQQLEWLIKTPLPY---PI 119
Query 121 KVWIKLNSGMNRLGFKPDEIIEVIQQLQHQGF---HCVLTMHFANADVPDHPMNQRQIDQ 177
KVW+K+N+GM+RLGFK E+ +V+ LQ + L H A AD P P NQ+QI
Sbjct 120 KVWVKVNTGMHRLGFKIHELQKVMGALQTCTWVDKSIGLMTHLACADEPHRPENQQQISL 179
Query 178 LITIKTACAPIEISCCNSAAIFNWPELHFDYVRPGIMLYGASPFAEQNIHQLDLKPVMRF 237
I + S NSAAI ++P+ D VRPGIMLYG SPFA QN H L L PVMRF
Sbjct 180 FQEISIPGFR-QRSIANSAAIISFPDSQADVVRPGIMLYGVSPFANQNAHDLGLIPVMRF 238
Query 238 TAHIMALNTIKAGEHIGYGSLYTAKTDMTVAIVSIGYGDGYPRAFIAQNFVALGQQLFPI 297
+ I A++ + +GYG + + + +V+ GYGDGYPR + V + + I
Sbjct 239 MSAISAIHDNPSFAQVGYGGTWKSDKPSRIGVVAAGYGDGYPRHISEKTPVWVRGREVSI 298
Query 298 VGRVSMDMLAIDVTDR-DIAIDTEIELWGHTRLVDEVASANGTIGYELLCRLSNR 351
VGRVSMDML ID+T+ DI I E+ELWG LV+ +A + GT+GYELLC++S R
Sbjct 299 VGRVSMDMLTIDLTEHPDIEIGDEVELWGTHVLVERIAKSAGTVGYELLCQISER 353
>A5IGG9 Alanine racemase [Legionella pneumophila (strain Corby)]
Length=357
Score = 284 bits (726), Expect = 4e-97
Identities = 158/355 (45%), Positives = 220/355 (62%), Gaps = 9/355 (3%)
Query 2 RHATVYIDRQALRYNLNRVKQLAPHAKIVSMVKANAYGHGIKDCLAALE-TTDSFGVACL 60
R + I+ AL +NL+++K LAP K+++MVKANAYG G+++ L+ ++FGVACL
Sbjct 3 RPTRLVIEPSALLHNLSQIKHLAPGKKVIAMVKANAYGCGVREVAPVLDGRIEAFGVACL 62
Query 61 AEALEIRDEGYTQSITLIEGVFSQDEMPIVIEKNLECVVHHAQQIKWLLEYKTQYITQKL 120
EAL IR G L +GVFS DE+ + +E + CV+HHAQQ++WL++ Y +
Sbjct 63 EEALAIRALGVETPCILFQGVFSSDELSVAVENDFACVLHHAQQLEWLIKTPLPY---PI 119
Query 121 KVWIKLNSGMNRLGFKPDEIIEVIQQLQHQGF---HCVLTMHFANADVPDHPMNQRQIDQ 177
KVW+K+N+GM+RLGFK E+ +V+ LQ + L H A AD P P NQ+QI
Sbjct 120 KVWVKVNTGMHRLGFKIHELQKVMGALQTCTWVDKSIGLMTHLACADEPHRPENQQQISL 179
Query 178 LITIKTACAPIEISCCNSAAIFNWPELHFDYVRPGIMLYGASPFAEQNIHQLDLKPVMRF 237
I + S NSAAI ++P+ D VRPGIMLYG SPFA QN H L L PVMRF
Sbjct 180 FQEISIPGFR-QRSIANSAAIISFPDSQADVVRPGIMLYGVSPFANQNAHDLGLIPVMRF 238
Query 238 TAHIMALNTIKAGEHIGYGSLYTAKTDMTVAIVSIGYGDGYPRAFIAQNFVALGQQLFPI 297
+ I A++ + +GYG + + + +V+ GYGDGYPR + V + + I
Sbjct 239 MSAISAIHDNPSFAQVGYGGTWKSDKPSRIGVVAAGYGDGYPRHISEKTPVWVRGREVSI 298
Query 298 VGRVSMDMLAIDVTDR-DIAIDTEIELWGHTRLVDEVASANGTIGYELLCRLSNR 351
VGRVSMDML ID+T+ D+ I E+ELWG LV+ +A + GT+GYELLC++S R
Sbjct 299 VGRVSMDMLTIDLTEHPDVEIGDEVELWGTHVLVERIAKSAGTVGYELLCQISER 353
>Q5WYG1 Alanine racemase [Legionella pneumophila (strain Lens)]
Length=357
Score = 281 bits (720), Expect = 3e-96
Identities = 158/355 (45%), Positives = 220/355 (62%), Gaps = 9/355 (3%)
Query 2 RHATVYIDRQALRYNLNRVKQLAPHAKIVSMVKANAYGHGIKDCLAALE-TTDSFGVACL 60
R + I+ AL +NL+++K LAP K+++MVKANAYG G+++ L+ ++FGVACL
Sbjct 3 RPTRLVIEPSALLHNLSQIKHLAPGKKVIAMVKANAYGCGVREVAPVLDGRIEAFGVACL 62
Query 61 AEALEIRDEGYTQSITLIEGVFSQDEMPIVIEKNLECVVHHAQQIKWLLEYKTQYITQKL 120
EAL IR G L +GVFS DE+ + +E + CV+HHA+Q++WL++ Y +
Sbjct 63 EEALAIRALGVETPCILFQGVFSSDELSVAVENDFACVLHHAKQLEWLIKTPLPY---PI 119
Query 121 KVWIKLNSGMNRLGFKPDEIIEVIQQLQHQGF---HCVLTMHFANADVPDHPMNQRQIDQ 177
KVW+K+N+GM+RLGFK E+ +V+ LQ + + L H A AD P P NQ+QI
Sbjct 120 KVWVKVNTGMHRLGFKIHELQKVMDALQTCTWVDKNIGLMTHLACADEPHRPENQQQISL 179
Query 178 LITIKTACAPIEISCCNSAAIFNWPELHFDYVRPGIMLYGASPFAEQNIHQLDLKPVMRF 237
I + S NSAAI ++P+ D VRPGIMLYG SPFA QN L L PVMRF
Sbjct 180 FQEISIPGFR-QRSIANSAAIISFPDSQADVVRPGIMLYGVSPFANQNARDLGLIPVMRF 238
Query 238 TAHIMALNTIKAGEHIGYGSLYTAKTDMTVAIVSIGYGDGYPRAFIAQNFVALGQQLFPI 297
+ I A++ + +GYG + + + IV+ GYGDGYPR + V + + I
Sbjct 239 MSAISAIHDNPSFAQVGYGGTWKSDKPSRIGIVAAGYGDGYPRHISEKTPVWVRGREVSI 298
Query 298 VGRVSMDMLAIDVTDR-DIAIDTEIELWGHTRLVDEVASANGTIGYELLCRLSNR 351
VGRVSMDML ID+T+ D+ I E+ELWG LV+ +A + GTIGYELLC++S R
Sbjct 299 VGRVSMDMLTIDLTEHPDVEIGDEVELWGTHVLVERIAKSAGTIGYELLCQISER 353
>Q1H1N8 Alanine racemase [Methylobacillus flagellatus (strain
KT / ATCC 51484 / DSM 6875)]
Length=357
Score = 261 bits (668), Expect = 2e-88
Identities = 150/360 (42%), Positives = 219/360 (61%), Gaps = 9/360 (3%)
Query 1 VRHATVYIDRQALRYNLNRVKQLAPHAKIVSMVKANAYGHGIKDCLAALETTDSFGVACL 60
+R T ID ALR+NLN V+Q AP ++++++VKA+AYGHG+ L D FGV L
Sbjct 1 MRATTATIDLGALRHNLNLVRQRAPGSRVLAVVKADAYGHGLLRVAPGLAEADGFGVLRL 60
Query 61 AEALEIRDEGYTQSITLIEGVFSQDEMPIVIEKNLECVVHHAQQIKWLLEYKTQYITQKL 120
EAL +R+ GY Q + L+EG+FS DE+ + + VVH+AQQ+ + E + +
Sbjct 61 EEALALREAGYRQRLLLLEGIFSMDELGAAAQHGISVVVHNAQQLA-MFEAMAAASVKPI 119
Query 121 KVWIKLNSGMNRLGFKPDEIIEVIQQLQHQGFHCVLTM--HFANADVPDHPMNQ-RQIDQ 177
V++K+NSGMNRLGFK + +Q+L+ +++ HFA AD +Q ++ D
Sbjct 120 SVFLKMNSGMNRLGFKSQAYKQALQRLEACPVVADVSLMTHFATADEERGIADQLKEFDA 179
Query 178 LITIKTACAPIEISCCNSAAIFNWPELHFDYVRPGIMLYGASPFAEQNIHQLDLKPVMRF 237
+ TA +S NSAAI +PE H D+VRPGI+LYGASP + + L+P MRF
Sbjct 180 V----TAGWHHPVSLANSAAILRFPEAHRDWVRPGIILYGASPVSGVSAASFGLRPAMRF 235
Query 238 TAHIMALNTIKAGEHIGYGSLYTAKTDMTVAIVSIGYGDGYPRAFIAQNFVALGQQLFPI 297
T+ ++A+ T++AG+ +GYG+ +TA VAIV+ GY DGYPR +A+
Sbjct 236 TSEVIAVQTLEAGDILGYGARFTATQATRVAIVACGYADGYPRHAPNGTPIAIDGHRTQT 295
Query 298 VGRVSMDMLAIDVTD-RDIAIDTEIELWGHTRLVDEVASANGTIGYELLCRLSNRPIRKV 356
+GRVSMDML D++ D + +++ELWG VD VA A GT+GYELLC ++ R + KV
Sbjct 296 LGRVSMDMLFADISQLPDADVGSQVELWGEVVPVDAVAEAAGTVGYELLCAVAPRVVFKV 355
>Q9KUY6 Alanine racemase [Vibrio cholerae serotype O1 (strain
ATCC 39315 / El Tor Inaba N16961)]
Length=361
Score = 260 bits (665), Expect = 7e-88
Identities = 138/356 (39%), Positives = 221/356 (62%), Gaps = 10/356 (3%)
Query 1 VRHATVYIDRQALRYNLNRVKQLAPHAKIVSMVKANAYGHGIKDCLAALETTDSFGVACL 60
++ AT YI+ +AL++NL RVKQ AP +KI+++VKAN YGHG++ D+FGVA +
Sbjct 1 MKAATAYINLEALQHNLQRVKQQAPESKIMAVVKANGYGHGLRHIARHALGADAFGVARI 60
Query 61 AEALEIRDEGYTQSITLIEGVFSQDEMPIVIEKNLECVVHHAQQIKWLLEYKTQYITQKL 120
EAL++R G + I L+EG +S ++P+++ N++ VVH +Q++ L + + + +
Sbjct 61 EEALQLRASGVVKPILLLEGFYSPGDLPVLVTNNIQTVVHCEEQLQALEQAQLE---TPV 117
Query 121 KVWIKLNSGMNRLGFKPDEIIEVIQQLQHQGFHCVLTM----HFANADVPDHPMNQRQID 176
VW+K++SGM+RLG +P++ + + +L HQ + + HF AD D Q +
Sbjct 118 MVWLKVDSGMHRLGVRPEQYQDFVARL-HQCENVAKPLRYMSHFGCADELDKSTTVEQTE 176
Query 177 QLITIKTACAPIEISCCNSAAIFNWPELHFDYVRPGIMLYGASPFAEQNIHQLDLKPVMR 236
+++ C E S SA + WP+ ++VRPGI++YG SPF E++ QL +PVM
Sbjct 177 LFLSLTQGCQG-ERSLAASAGLLAWPQSQLEWVRPGIIMYGVSPFVEKSAVQLGYQPVMT 235
Query 237 FTAHIMALNTIKAGEHIGYGSLYTAKTDMTVAIVSIGYGDGYPRAFIAQNFVALGQQLFP 296
+H++A+ +KAGE +GYG +T++ D + +++IGYGDGYPR V + + P
Sbjct 236 LKSHLIAVREVKAGESVGYGGTWTSQRDTKIGVIAIGYGDGYPRTAPNGTPVVVNGRRVP 295
Query 297 IVGRVSMDMLAIDV-TDRDIAIDTEIELWGHTRLVDEVASANGTIGYELLCRLSNR 351
I GRVSMDML +D+ D + E LWG+ V+EVA+ GTIGYEL+ +L++R
Sbjct 296 IAGRVSMDMLTVDLGPDACDRVGDEAMLWGNELPVEEVAAHIGTIGYELVTKLTSR 351
>B7VI70 Alanine racemase [Vibrio atlanticus (strain LGP32)]
Length=358
Score = 259 bits (661), Expect = 3e-87
Identities = 139/356 (39%), Positives = 214/356 (60%), Gaps = 10/356 (3%)
Query 1 VRHATVYIDRQALRYNLNRVKQLAPHAKIVSMVKANAYGHGIKDCLAALETTDSFGVACL 60
++ AT ID AL +NLN++K APH K++S+VKAN YGHG+ +++D+FGVA +
Sbjct 1 MKAATASIDLNALEHNLNQIKSKAPHCKVMSVVKANGYGHGLLHIAKHSKSSDAFGVARI 60
Query 61 AEALEIRDEGYTQSITLIEGVFSQDEMPIVIEKNLECVVHHAQQIKWLLEYKTQYITQKL 120
EAL++R G + I L+EG +S ++PI++ N++ VVH +Q+ L + + +
Sbjct 61 EEALQLRAGGIVKPILLLEGFYSSGDLPILVTNNIQTVVHCEEQLSAL---ENAELETPV 117
Query 121 KVWIKLNSGMNRLGFKPDEIIEVIQQLQHQGFHCVLTM----HFANADVPDHPMNQRQID 176
VW+K++SGM+RLG +P++ +++L HQ + + HF AD D Q +
Sbjct 118 VVWLKVDSGMHRLGARPEQYQNFVERL-HQCANVAKPLRYMSHFGCADELDRATTVEQTE 176
Query 177 QLITIKTACAPIEISCCNSAAIFNWPELHFDYVRPGIMLYGASPFAEQNIHQLDLKPVMR 236
+++ C E S SA + WP+ H D+VRPGI+ YG SPFA+++ L PVM
Sbjct 177 LFLSLTDGCEG-ERSLAASAGLLAWPDSHLDWVRPGIISYGVSPFADKSAQDLGFYPVMT 235
Query 237 FTAHIMALNTIKAGEHIGYGSLYTAKTDMTVAIVSIGYGDGYPRAFIAQNFVALGQQLFP 296
T+H++A+ +KAGE +GYG +T++ D V +++IGYGDGYPR V + + P
Sbjct 236 LTSHLIAVRDVKAGESVGYGGNWTSERDTKVGVIAIGYGDGYPRTAPNGTPVFVNGRKVP 295
Query 297 IVGRVSMDMLAIDV-TDRDIAIDTEIELWGHTRLVDEVASANGTIGYELLCRLSNR 351
I GRVSMDML +D+ D + E LWG +EVA GTI YEL+ +L++R
Sbjct 296 IAGRVSMDMLTVDLGPDAADKVGDEATLWGKDLPSEEVAEHIGTIAYELVTKLTSR 351
>B6ELK6 Alanine racemase [Aliivibrio salmonicida (strain LFI1238)]
Length=358
Score = 256 bits (653), Expect = 4e-86
Identities = 132/352 (38%), Positives = 212/352 (60%), Gaps = 8/352 (2%)
Query 4 ATVYIDRQALRYNLNRVKQLAPHAKIVSMVKANAYGHGIKDCLAALETTDSFGVACLAEA 63
A ID AL +NL ++KQ AP++K++++VKAN YGHG+ + D+FGVA + EA
Sbjct 4 AAAQIDMSALAHNLQKIKQQAPNSKLLAVVKANGYGHGLLNIAKGAHGVDAFGVARIEEA 63
Query 64 LEIRDEGYTQSITLIEGVFSQDEMPIVIEKNLECVVHHAQQIKWLLEYKTQYITQKLKVW 123
L++R G + + L+EG +S ++PI++ N++ VH +Q++ L + + + VW
Sbjct 64 LQLRAGGIVKQVLLLEGFYSAGDLPILVANNIQTAVHCKEQLEAL---ENADLEGPVVVW 120
Query 124 IKLNSGMNRLGFKPDEIIEVIQQL---QHQGFHCVLTMHFANADVPDHPMNQRQIDQLIT 180
+K++SGM+RLG +P+E E + +L ++ HF AD D+P QI+ ++
Sbjct 121 LKVDSGMHRLGIRPEEYQEYVDRLHACKNVAQPLRYMSHFGCADELDNPTTNEQIETFMS 180
Query 181 IKTACAPIEISCCNSAAIFNWPELHFDYVRPGIMLYGASPFAEQNIHQLDLKPVMRFTAH 240
+ C E S SA + WP+ D+VRPGI++YG SPF+E+ L P M T+H
Sbjct 181 LTDGCQG-ERSLAASAGLLAWPDSQLDWVRPGIIMYGVSPFSEKTAQDLGYLPTMTLTSH 239
Query 241 IMALNTIKAGEHIGYGSLYTAKTDMTVAIVSIGYGDGYPRAFIAQNFVALGQQLFPIVGR 300
++A+ +KAGE +GYG+++T++ D + +++IGYGDGYP A V + + P+ GR
Sbjct 240 LIAVREVKAGESVGYGAMWTSERDTKIGVIAIGYGDGYPIAAPNGTPVLVNGRKVPVAGR 299
Query 301 VSMDMLAIDV-TDRDIAIDTEIELWGHTRLVDEVASANGTIGYELLCRLSNR 351
VSMDML +D+ D + + E LWG +EVA GTI YEL+ +L++R
Sbjct 300 VSMDMLTVDLGPDAEDNVGDEAILWGRDLPAEEVAEHIGTIAYELVTKLTSR 351
>Q3V7N2 Alanine racemase [Pectobacterium atrosepticum (strain
SCRI 1043 / ATCC BAA-672)]
Length=360
Score = 254 bits (650), Expect = 1e-85
Identities = 142/355 (40%), Positives = 211/355 (59%), Gaps = 8/355 (2%)
Query 1 VRHATVYIDRQALRYNLNRVKQLAPHAKIVSMVKANAYGHGIKDCLAALETTDSFGVACL 60
++ AT I+R+ALR+NL R++QLAP ++IV++VKANAYGHG+ + D +GVA L
Sbjct 1 MKTATAVINRRALRHNLQRIRQLAPGSQIVAVVKANAYGHGMIESAHTFCDADCYGVARL 60
Query 61 AEALEIRDEGYTQSITLIEGVFSQDEMPIVIEKNLECVVHHAQQIKWLLEYKTQYITQKL 120
+EAL +R G T+ I L+EG FS D++P+++E LE VH +Q+ LE T + Q +
Sbjct 61 SEALALRAAGITKPIVLLEGFFSADDLPLLVEHQLETAVHSLEQLA-ALEQAT--LPQPI 117
Query 121 KVWIKLNSGMNRLGFKPDEIIEVIQQL---QHQGFHCVLTMHFANADVPDHPMNQRQIDQ 177
+VW+KL++GM+RLG P+ Q+L ++ + HF AD P+ +RQ+
Sbjct 118 RVWMKLDTGMHRLGVLPEHADAFWQRLTECRNVVQPVNIMSHFCRADEPEAGTTERQL-A 176
Query 178 LITIKTACAPIEISCCNSAAIFNWPELHFDYVRPGIMLYGASPFAEQNIHQLDLKPVMRF 237
T P S S I WP+ H D VRPGI+LYG SP ++ +P M F
Sbjct 177 CFDAFTQGKPGAQSIAASGGILLWPQAHRDRVRPGIILYGVSPLDNEDAAHFGFQPAMTF 236
Query 238 TAHIMALNTIKAGEHIGYGSLYTAKTDMTVAIVSIGYGDGYPRAFIAQNFVALGQQLFPI 297
T+H++A+ KAGE +GYG +T+ D + +V++GYGDGYPR A V + + P+
Sbjct 237 TSHLIAVREHKAGETVGYGGTWTSPRDTRLGVVAVGYGDGYPRCAPAGTPVLINGREVPL 296
Query 298 VGRVSMDMLAIDV-TDRDIAIDTEIELWGHTRLVDEVASANGTIGYELLCRLSNR 351
GRVSMDM+ +D+ D + E+ LWG T V+ +A+ G YEL+ RL+ R
Sbjct 297 SGRVSMDMITVDLGPDAQDKVGDEVILWGPTLSVERIAAHTGASAYELITRLTQR 351
>Q8X4I9 Alanine racemase, catabolic [Escherichia coli O157:H7]
Length=356
Score = 254 bits (648), Expect = 2e-85
Identities = 148/350 (42%), Positives = 209/350 (60%), Gaps = 14/350 (4%)
Query 8 IDRQALRYNLNRVKQLAPHAKIVSMVKANAYGHGIKDCLAALETTDSFGVACLAEALEIR 67
+D QAL+ NL+ V+Q APHA++ S+VKANAYGHGI+ +AL TD F + L EA+ +R
Sbjct 9 LDLQALKQNLSIVRQAAPHARVWSVVKANAYGHGIERIWSALGATDGFALLNLEEAITLR 68
Query 68 DEGYTQSITLIEGVFSQDEMPIVIEKNLECVVHHAQQIKWLLEYKTQYITQKLKVWIKLN 127
+ G+ I ++EG F ++ + + L VH Q+K L + + L +++K+N
Sbjct 69 ERGWKGPILMLEGFFHAQDLEMYDQHRLTTCVHSNWQLKAL---QNARLKAPLDIYLKVN 125
Query 128 SGMNRLGFKPDEIIEVIQQLQHQG--FHCVLTMHFANADVPDHPMNQRQIDQLITIKTAC 185
SGMNRLGF+PD ++ V QQL+ L HFA A+ PD + I+ A
Sbjct 126 SGMNRLGFQPDRVLTVWQQLRAMANVGEMTLMSHFAEAEHPDGISG-----AMARIEQAA 180
Query 186 APIEI--SCCNSAAIFNWPELHFDYVRPGIMLYGASPFAE-QNIHQLDLKPVMRFTAHIM 242
+E S NSAA PE HFD+VRPGI+LYGASP + ++I L+PVM ++ I+
Sbjct 181 EGLECRRSLSNSAATLWHPEAHFDWVRPGIILYGASPSGQWRDIANTGLRPVMTLSSEII 240
Query 243 ALNTIKAGEHIGYGSLYTAKTDMTVAIVSIGYGDGYPRAFIAQNFVALGQQLFPIVGRVS 302
+ T+KAGE +GYG YTA+ + + IV+ GY DGYPR V + VG VS
Sbjct 241 GVQTLKAGERVGYGGRYTARDEQRIGIVAAGYADGYPRHAPTGTPVLVDGVRTMTVGTVS 300
Query 303 MDMLAIDVTD-RDIAIDTEIELWGHTRLVDEVASANGTIGYELLCRLSNR 351
MDMLA+D+T I T +ELWG +D+VA+A GT+GYEL+C L+ R
Sbjct 301 MDMLAVDLTPCPQAGIGTPVELWGKEIKIDDVAAAAGTVGYELMCALALR 350
>P29012 Alanine racemase, catabolic [Escherichia coli (strain
K12)]
Length=356
Score = 251 bits (641), Expect = 2e-84
Identities = 147/350 (42%), Positives = 208/350 (59%), Gaps = 14/350 (4%)
Query 8 IDRQALRYNLNRVKQLAPHAKIVSMVKANAYGHGIKDCLAALETTDSFGVACLAEALEIR 67
+D QAL+ NL+ V+Q A HA++ S+VKANAYGHGI+ +A+ TD F + L EA+ +R
Sbjct 9 LDLQALKQNLSIVRQAATHARVWSVVKANAYGHGIERIWSAIGATDGFALLNLEEAITLR 68
Query 68 DEGYTQSITLIEGVFSQDEMPIVIEKNLECVVHHAQQIKWLLEYKTQYITQKLKVWIKLN 127
+ G+ I ++EG F ++ I + L VH Q+K L + + L +++K+N
Sbjct 69 ERGWKGPILMLEGFFHAQDLEIYDQHRLTTCVHSNWQLKAL---QNARLKAPLDIYLKVN 125
Query 128 SGMNRLGFKPDEIIEVIQQLQHQG--FHCVLTMHFANADVPDHPMNQRQIDQLITIKTAC 185
SGMNRLGF+PD ++ V QQL+ L HFA A+ PD + I+ A
Sbjct 126 SGMNRLGFQPDRVLTVWQQLRAMANVGEMTLMSHFAEAEHPDGISG-----AMARIEQAA 180
Query 186 APIEI--SCCNSAAIFNWPELHFDYVRPGIMLYGASPFAE-QNIHQLDLKPVMRFTAHIM 242
+E S NSAA PE HFD+VRPGI+LYGASP + ++I L+PVM ++ I+
Sbjct 181 EGLECRRSLSNSAATLWHPEAHFDWVRPGIILYGASPSGQWRDIANTGLRPVMTLSSEII 240
Query 243 ALNTIKAGEHIGYGSLYTAKTDMTVAIVSIGYGDGYPRAFIAQNFVALGQQLFPIVGRVS 302
+ T+KAGE +GYG YTA+ + + IV+ GY DGYPR V + VG VS
Sbjct 241 GVQTLKAGERVGYGGRYTARDEQRIGIVAAGYADGYPRHAPTGTPVLVDGVRTMTVGTVS 300
Query 303 MDMLAIDVTD-RDIAIDTEIELWGHTRLVDEVASANGTIGYELLCRLSNR 351
MDMLA+D+T I T +ELWG +D+VA+A GT+GYEL+C L+ R
Sbjct 301 MDMLAVDLTPCPQAGIGTPVELWGKEIKIDDVAAAAGTVGYELMCALALR 350
>P0A1A3 Alanine racemase, biosynthetic [Salmonella typhimurium
(strain LT2 / SGSC1412 / ATCC 700720)]
Length=359
Score = 241 bits (616), Expect = 2e-80
Identities = 142/362 (39%), Positives = 212/362 (59%), Gaps = 15/362 (4%)
Query 4 ATVYIDRQALRYNLNRVKQLAPHAKIVSMVKANAYGHGIKDCLAALETTDSFGVACLAEA 63
ATV I+R+ALR+NL R+++LAP +K+V++VKANAYGHG+ + L D+FGVA L EA
Sbjct 4 ATVVINRRALRHNLQRLRELAPASKLVAVVKANAYGHGLLETARTLPDADAFGVARLEEA 63
Query 64 LEIRDEGYTQSITLIEGVFSQDEMPIVIEKNLECVVHHAQQIKWLLEYKTQYITQKLKVW 123
L +R G TQ I L+EG F ++P + + L VH+ +Q+ L + + + + VW
Sbjct 64 LRLRAGGITQPILLLEGFFDAADLPTISAQCLHTAVHNQEQLAAL---EAVELAEPVTVW 120
Query 124 IKLNSGMNRLGFKPDEIIEVIQQLQH-----QGFHCVLTMHFANADVPDHPMNQRQIDQL 178
+KL++GM+RLG +P+E Q+L H Q + V HFA AD P+ + Q+D +
Sbjct 121 MKLDTGMHRLGVRPEEAEAFYQRLTHCKNVRQPVNIV--SHFARADEPECGATEHQLD-I 177
Query 179 ITIKTACAPIEISCCNSAAIFNWPELHFDYVRPGIMLYGASPFAEQNI-HQLDLKPVMRF 237
P + S S I WP+ HFD+ RPGI+LYG SP + +PVM
Sbjct 178 FNAFCQGKPGQRSIAASGGILLWPQSHFDWARPGIILYGVSPLEHKPWGPDFGFQPVMSL 237
Query 238 TAHIMALNTIKAGEHIGYGSLYTAKTDMTVAIVSIGYGDGYPRAFIAQNFVALGQQLFPI 297
T+ ++A+ KAGE +GYG + ++ D + +V++GYGDGYPRA + V + + PI
Sbjct 238 TSSLIAVRDHKAGEPVGYGGTWVSERDTRLGVVAMGYGDGYPRAAPSGTPVLVNGREVPI 297
Query 298 VGRVSMDMLAIDV--TDRDIAIDTEIELWGHTRLVDEVASANGTIGYELLCRLSNRPIRK 355
VGRV+MDM+ +D+ +D A D + LWG V+ +A YEL+ RL++R K
Sbjct 298 VGRVAMDMICVDLGPNAQDNAGD-PVVLWGEGLPVERIAEMTKVSAYELITRLTSRVAMK 356
Query 356 VI 357
I
Sbjct 357 YI 358
>Q93HP9 Alanine racemase, biosynthetic [Shigella sonnei]
Length=359
Score = 239 bits (611), Expect = 9e-80
Identities = 139/362 (38%), Positives = 214/362 (59%), Gaps = 15/362 (4%)
Query 4 ATVYIDRQALRYNLNRVKQLAPHAKIVSMVKANAYGHGIKDCLAALETTDSFGVACLAEA 63
ATV I+R+ALR+NL R+++LAP +K+V++VKANAYGHG+ + L D+FGVA L EA
Sbjct 4 ATVVINRRALRHNLQRLRELAPASKMVAVVKANAYGHGLLETARTLPDADAFGVARLEEA 63
Query 64 LEIRDEGYTQSITLIEGVFSQDEMPIVIEKNLECVVHHAQQIKWLLEYKTQYITQKLKVW 123
L +R G T+ + L+EG F ++P + ++ VH+ +Q+ L E + + + VW
Sbjct 64 LRLRAGGITKPVLLLEGFFDARDLPTISAQHFHTAVHNEEQLAALEEAS---LDEPVTVW 120
Query 124 IKLNSGMNRLGFKPDE---IIEVIQQLQHQGFHCVLTMHFANADVPDHPMNQRQIDQLIT 180
+KL++GM+RLG +P++ + Q ++ + HFA AD P ++ QL
Sbjct 121 MKLDTGMHRLGVRPEQAEAFYHRLTQCKNVRQPVNIVSHFARADEPKCGATEK---QLAI 177
Query 181 IKTAC--APIEISCCNSAAIFNWPELHFDYVRPGIMLYGASPFAEQNI-HQLDLKPVMRF 237
T C P + S S I WP+ HFD+VRPGI+LYG SP +++I +PVM
Sbjct 178 FNTFCEGKPGQRSIAASGGILLWPQSHFDWVRPGIILYGVSPLEDRSIGADFGCQPVMSL 237
Query 238 TAHIMALNTIKAGEHIGYGSLYTAKTDMTVAIVSIGYGDGYPRAFIAQNFVALGQQLFPI 297
T+ ++A+ KAGE +GYG + ++ D + +V++GYGDGYPRA + V + + PI
Sbjct 238 TSSLIAVREHKAGEPVGYGGTWVSERDTRLGVVAMGYGDGYPRAAPSGTPVLVNGREVPI 297
Query 298 VGRVSMDMLAIDV--TDRDIAIDTEIELWGHTRLVDEVASANGTIGYELLCRLSNRPIRK 355
VGRV+MDM+ +D+ +D A D I LWG V+ +A YEL+ RL++R K
Sbjct 298 VGRVAMDMICVDLGPQAQDKAGDPVI-LWGEGLPVERIAEMTKVSAYELITRLTSRVAMK 356
Query 356 VI 357
+
Sbjct 357 YV 358
>P0A6B5 Alanine racemase, biosynthetic [Shigella flexneri]
Length=359
Score = 238 bits (606), Expect = 5e-79
Identities = 138/362 (38%), Positives = 213/362 (59%), Gaps = 15/362 (4%)
Query 4 ATVYIDRQALRYNLNRVKQLAPHAKIVSMVKANAYGHGIKDCLAALETTDSFGVACLAEA 63
ATV I+R+ALR+NL R+++LAP +K+V++VKANAYGHG+ + L D+FGVA L EA
Sbjct 4 ATVVINRRALRHNLQRLRELAPASKMVAVVKANAYGHGLLETARTLPDADAFGVARLEEA 63
Query 64 LEIRDEGYTQSITLIEGVFSQDEMPIVIEKNLECVVHHAQQIKWLLEYKTQYITQKLKVW 123
L +R G T+ + L+EG F ++P + ++ VH+ +Q+ L E + + + VW
Sbjct 64 LRLRAGGITKPVLLLEGFFDARDLPTISAQHFHTAVHNEEQLAALEEAS---LDEPVTVW 120
Query 124 IKLNSGMNRLGFKPDE---IIEVIQQLQHQGFHCVLTMHFANADVPDHPMNQRQIDQLIT 180
+KL++GM+RLG +P++ + Q ++ + HFA AD P ++ QL
Sbjct 121 MKLDTGMHRLGVRPEQAEAFYHRLTQCKNVRQPVNIVSHFARADEPKCGATEK---QLAI 177
Query 181 IKTAC--APIEISCCNSAAIFNWPELHFDYVRPGIMLYGASPFAEQNI-HQLDLKPVMRF 237
T C P + S S I WP+ HFD+VRPGI+LYG SP +++ +PVM
Sbjct 178 FNTFCEGKPGQRSIAASGGILLWPQSHFDWVRPGIILYGVSPLEDRSTGADFGCQPVMSL 237
Query 238 TAHIMALNTIKAGEHIGYGSLYTAKTDMTVAIVSIGYGDGYPRAFIAQNFVALGQQLFPI 297
T+ ++A+ KAGE +GYG + ++ D + +V++GYGDGYPRA + V + + PI
Sbjct 238 TSSLIAVREHKAGEPVGYGGTWVSERDTRLGVVAMGYGDGYPRAAPSGTPVLVNGREVPI 297
Query 298 VGRVSMDMLAIDV--TDRDIAIDTEIELWGHTRLVDEVASANGTIGYELLCRLSNRPIRK 355
VGRV+MDM+ +D+ +D A D I LWG V+ +A YEL+ RL++R K
Sbjct 298 VGRVAMDMICVDLGPQAQDKAGDPVI-LWGEGLPVERIAEMTKVSAYELITRLTSRVAMK 356
Query 356 VI 357
+
Sbjct 357 YV 358
>P0A6B6 Alanine racemase, biosynthetic [Shigella boydii]
Length=359
Score = 238 bits (606), Expect = 5e-79
Identities = 138/362 (38%), Positives = 213/362 (59%), Gaps = 15/362 (4%)
Query 4 ATVYIDRQALRYNLNRVKQLAPHAKIVSMVKANAYGHGIKDCLAALETTDSFGVACLAEA 63
ATV I+R+ALR+NL R+++LAP +K+V++VKANAYGHG+ + L D+FGVA L EA
Sbjct 4 ATVVINRRALRHNLQRLRELAPASKMVAVVKANAYGHGLLETARTLPDADAFGVARLEEA 63
Query 64 LEIRDEGYTQSITLIEGVFSQDEMPIVIEKNLECVVHHAQQIKWLLEYKTQYITQKLKVW 123
L +R G T+ + L+EG F ++P + ++ VH+ +Q+ L E + + + VW
Sbjct 64 LRLRAGGITKPVLLLEGFFDARDLPTISAQHFHTAVHNEEQLAALEEAS---LDEPVTVW 120
Query 124 IKLNSGMNRLGFKPDE---IIEVIQQLQHQGFHCVLTMHFANADVPDHPMNQRQIDQLIT 180
+KL++GM+RLG +P++ + Q ++ + HFA AD P ++ QL
Sbjct 121 MKLDTGMHRLGVRPEQAEAFYHRLTQCKNVRQPVNIVSHFARADEPKCGATEK---QLAI 177
Query 181 IKTAC--APIEISCCNSAAIFNWPELHFDYVRPGIMLYGASPFAEQNI-HQLDLKPVMRF 237
T C P + S S I WP+ HFD+VRPGI+LYG SP +++ +PVM
Sbjct 178 FNTFCEGKPGQRSIAASGGILLWPQSHFDWVRPGIILYGVSPLEDRSTGADFGCQPVMSL 237
Query 238 TAHIMALNTIKAGEHIGYGSLYTAKTDMTVAIVSIGYGDGYPRAFIAQNFVALGQQLFPI 297
T+ ++A+ KAGE +GYG + ++ D + +V++GYGDGYPRA + V + + PI
Sbjct 238 TSSLIAVREHKAGEPVGYGGTWVSERDTRLGVVAMGYGDGYPRAAPSGTPVLVNGREVPI 297
Query 298 VGRVSMDMLAIDV--TDRDIAIDTEIELWGHTRLVDEVASANGTIGYELLCRLSNRPIRK 355
VGRV+MDM+ +D+ +D A D I LWG V+ +A YEL+ RL++R K
Sbjct 298 VGRVAMDMICVDLGPQAQDKAGDPVI-LWGEGLPVERIAEMTKVSAYELITRLTSRVAMK 356
Query 356 VI 357
+
Sbjct 357 YV 358
>P0A6B4 Alanine racemase, biosynthetic [Escherichia coli (strain
K12)]
Length=359
Score = 238 bits (606), Expect = 5e-79
Identities = 138/362 (38%), Positives = 213/362 (59%), Gaps = 15/362 (4%)
Query 4 ATVYIDRQALRYNLNRVKQLAPHAKIVSMVKANAYGHGIKDCLAALETTDSFGVACLAEA 63
ATV I+R+ALR+NL R+++LAP +K+V++VKANAYGHG+ + L D+FGVA L EA
Sbjct 4 ATVVINRRALRHNLQRLRELAPASKMVAVVKANAYGHGLLETARTLPDADAFGVARLEEA 63
Query 64 LEIRDEGYTQSITLIEGVFSQDEMPIVIEKNLECVVHHAQQIKWLLEYKTQYITQKLKVW 123
L +R G T+ + L+EG F ++P + ++ VH+ +Q+ L E + + + VW
Sbjct 64 LRLRAGGITKPVLLLEGFFDARDLPTISAQHFHTAVHNEEQLAALEEAS---LDEPVTVW 120
Query 124 IKLNSGMNRLGFKPDE---IIEVIQQLQHQGFHCVLTMHFANADVPDHPMNQRQIDQLIT 180
+KL++GM+RLG +P++ + Q ++ + HFA AD P ++ QL
Sbjct 121 MKLDTGMHRLGVRPEQAEAFYHRLTQCKNVRQPVNIVSHFARADEPKCGATEK---QLAI 177
Query 181 IKTAC--APIEISCCNSAAIFNWPELHFDYVRPGIMLYGASPFAEQNI-HQLDLKPVMRF 237
T C P + S S I WP+ HFD+VRPGI+LYG SP +++ +PVM
Sbjct 178 FNTFCEGKPGQRSIAASGGILLWPQSHFDWVRPGIILYGVSPLEDRSTGADFGCQPVMSL 237
Query 238 TAHIMALNTIKAGEHIGYGSLYTAKTDMTVAIVSIGYGDGYPRAFIAQNFVALGQQLFPI 297
T+ ++A+ KAGE +GYG + ++ D + +V++GYGDGYPRA + V + + PI
Sbjct 238 TSSLIAVREHKAGEPVGYGGTWVSERDTRLGVVAMGYGDGYPRAAPSGTPVLVNGREVPI 297
Query 298 VGRVSMDMLAIDV--TDRDIAIDTEIELWGHTRLVDEVASANGTIGYELLCRLSNRPIRK 355
VGRV+MDM+ +D+ +D A D I LWG V+ +A YEL+ RL++R K
Sbjct 298 VGRVAMDMICVDLGPQAQDKAGDPVI-LWGEGLPVERIAEMTKVSAYELITRLTSRVAMK 356
Query 356 VI 357
+
Sbjct 357 YV 358
>Q932V0 Alanine racemase, biosynthetic [Shigella dysenteriae]
Length=359
Score = 238 bits (606), Expect = 5e-79
Identities = 138/362 (38%), Positives = 213/362 (59%), Gaps = 15/362 (4%)
Query 4 ATVYIDRQALRYNLNRVKQLAPHAKIVSMVKANAYGHGIKDCLAALETTDSFGVACLAEA 63
ATV I+R+ALR+NL R+++LAP +K+V++VKANAYGHG+ + L D+FGVA L EA
Sbjct 4 ATVVINRRALRHNLQRLRELAPASKMVAVVKANAYGHGLLETARTLPDADAFGVARLEEA 63
Query 64 LEIRDEGYTQSITLIEGVFSQDEMPIVIEKNLECVVHHAQQIKWLLEYKTQYITQKLKVW 123
L +R G T+ + L+EG F ++P + ++ VH+ +Q+ L E + + + VW
Sbjct 64 LRLRAGGITKPVLLLEGFFDARDLPTISAQHFHTAVHNEEQLAALEEAS---LDEPVTVW 120
Query 124 IKLNSGMNRLGFKPDE---IIEVIQQLQHQGFHCVLTMHFANADVPDHPMNQRQIDQLIT 180
+KL++GM+RLG +P++ + Q ++ + HFA AD P ++ QL
Sbjct 121 MKLDTGMHRLGVRPEQAGAFYHRLTQCKNVRQPVNIVSHFARADEPKCGATEK---QLAI 177
Query 181 IKTAC--APIEISCCNSAAIFNWPELHFDYVRPGIMLYGASPFAEQNI-HQLDLKPVMRF 237
T C P + S S I WP+ HFD+VRPGI+LYG SP +++ +PVM
Sbjct 178 FNTFCEGKPGQRSIAASGGILLWPQSHFDWVRPGIILYGVSPLEDRSTGADFGCQPVMSL 237
Query 238 TAHIMALNTIKAGEHIGYGSLYTAKTDMTVAIVSIGYGDGYPRAFIAQNFVALGQQLFPI 297
T+ ++A+ KAGE +GYG + ++ D + +V++GYGDGYPRA + V + + PI
Sbjct 238 TSSLIAVREHKAGEPVGYGGTWVSERDTRLGVVAMGYGDGYPRAAPSGTPVLVNGREVPI 297
Query 298 VGRVSMDMLAIDV--TDRDIAIDTEIELWGHTRLVDEVASANGTIGYELLCRLSNRPIRK 355
VGRV+MDM+ +D+ +D A D I LWG V+ +A YEL+ RL++R K
Sbjct 298 VGRVAMDMICVDLGPQAQDKAGDPVI-LWGEGLPVERIAEMTKVSAYELITRLTSRVAMK 356
Query 356 VI 357
+
Sbjct 357 YV 358
>B9WZ64 Alanine racemase [Pseudomonas taetrolens]
Length=357
Score = 237 bits (605), Expect = 6e-79
Identities = 139/356 (39%), Positives = 202/356 (57%), Gaps = 9/356 (3%)
Query 1 VRHATVYIDRQALRYNLNRVKQLAPHAKIVSMVKANAYGHGIKDCLAALET-TDSFGVAC 59
+R A ID QALR+N ++L AK ++++KA+AYGHG C ALE D F VAC
Sbjct 1 MRPARALIDLQALRHNYRLARELTG-AKALAVIKADAYGHGAVRCALALEAEADGFAVAC 59
Query 60 LAEALEIRDEGYTQSITLIEGVFSQDEMPIVIEKNLECVVHHAQQIKWLLEYKTQYITQK 119
+ EALE+R G + L+EG F E+ ++ E +L CVVH Q++ + +TQ + +
Sbjct 60 IEEALELRAAGIKAPVLLLEGFFEASELALIAEHDLWCVVHSLWQLEAI--ERTQ-LHKP 116
Query 120 LKVWIKLNSGMNRLGFKPDEIIEVIQQLQHQG--FHCVLTMHFANADVPDHPMNQRQIDQ 177
L VW+KL+SGM+R+G P + E Q+L G VL HFA AD D +QI
Sbjct 117 LTVWLKLDSGMHRVGLHPKDYHEAYQRLLASGKVARIVLMSHFARADELDADATAQQIAV 176
Query 178 LITIKTACAPIEISCCNSAAIFNWPELHFDYVRPGIMLYGASPFAEQNIHQLDLKPVMRF 237
+ A E S NS + WP+ D+VRPG+MLYGA+PF L+PVM
Sbjct 177 FEAARQGLAA-ECSLRNSPGVLGWPQAPSDWVRPGLMLYGATPFEVAQAEAERLQPVMTL 235
Query 238 TAHIMALNTIKAGEHIGYGSLYTAKTDMTVAIVSIGYGDGYPRAFIAQNFVALGQQLFPI 297
+ ++++ + AGE +GYG+ + + V +V++GY DGYPR V + + +
Sbjct 236 QSRVISVRELPAGEPVGYGAKFVSPRPTRVGVVAMGYADGYPRQAPNGTPVLVAGKRTQL 295
Query 298 VGRVSMDMLAIDVTD-RDIAIDTEIELWGHTRLVDEVASANGTIGYELLCRLSNRP 352
+GRVSMDML+ID+TD + + + +ELWG L EVA+ GTI Y++ C L P
Sbjct 296 IGRVSMDMLSIDLTDVPEATVGSPVELWGKHVLASEVAAHAGTIPYQIFCNLKRVP 351
>O30746 Alanine racemase, catabolic [Klebsiella aerogenes]
Length=356
Score = 237 bits (604), Expect = 9e-79
Identities = 143/356 (40%), Positives = 204/356 (57%), Gaps = 14/356 (4%)
Query 2 RHATVYIDRQALRYNLNRVKQLAPHAKIVSMVKANAYGHGIKDCLAALETTDSFGVACLA 61
R ID ALR NL V++ AP +++ ++ K NAYGHG+ +AL D F + L
Sbjct 3 RPVVASIDLLALRQNLQIVRRAAPGSRLWAVDKDNAYGHGVARVWSALSAADGFALLNLE 62
Query 62 EALEIRDEGYTQSITLIEGVFSQDEMPIVIEKNLECVVHHAQQIKWLLEYKTQYITQKLK 121
EA+ +R++G+ I L+EG F DE+ ++ + L VH QIK L + K + L
Sbjct 63 EAILLREQGWKGPILLLEGFFHADELAVLDQYRLPTSVHSNWQIKALQQAK---LRAPLD 119
Query 122 VWIKLNSGMNRLGFKPDEIIEVIQQLQ--HQGFHCVLTMHFANADVPDHPMNQRQIDQLI 179
+++K+NSGMNRLGF P+ + V QQL+ L HFA A+ P Q ++ +
Sbjct 120 IYLKVNSGMNRLGFMPERVHTVWQQLRAISNVGEMTLMSHFAEAENP-----QGIVEPMR 174
Query 180 TIKTACAPIEI--SCCNSAAIFNWPELHFDYVRPGIMLYGASPFAE-QNIHQLDLKPVMR 236
I+ A ++ S NSAA PE HFD+VRPGI+LYGASP + Q+I LKPVM
Sbjct 175 RIEQAAEGLDCPRSLANSAATLWHPEAHFDWVRPGIVLYGASPSGQWQDIANTGLKPVMT 234
Query 237 FTAHIMALNTIKAGEHIGYGSLYTAKTDMTVAIVSIGYGDGYPRAFIAQNFVALGQQLFP 296
+ I+ + ++ GE IGYG LY + + IV+ GY DGYPR + V +
Sbjct 235 LRSEIIGVQNLRPGEAIGYGGLYRTTQEQRIGIVACGYADGYPRVAPSGTPVLVDGVRTT 294
Query 297 IVGRVSMDMLAIDVTD-RDIAIDTEIELWGHTRLVDEVASANGTIGYELLCRLSNR 351
VGRVSMDMLA+D+T I +ELWG +D+VA+++GT+GYEL+C L+ R
Sbjct 295 TVGRVSMDMLAVDLTPCPQAGIGAPVELWGKEIKIDDVAASSGTVGYELMCALAPR 350
>P06191 Alanine racemase, catabolic [Salmonella typhimurium (strain
LT2 / SGSC1412 / ATCC 700720)]
Length=356
Score = 235 bits (600), Expect = 3e-78
Identities = 140/348 (40%), Positives = 198/348 (57%), Gaps = 10/348 (3%)
Query 8 IDRQALRYNLNRVKQLAPHAKIVSMVKANAYGHGIKDCLAALETTDSFGVACLAEALEIR 67
+D Q ++ NL V++ AP A++ S+VKANAYGHGI+ +AL TD F + L EA+ +R
Sbjct 9 LDLQVMKQNLAIVRRAAPEARVWSVVKANAYGHGIERVWSALGATDGFAMLNLEEAITLR 68
Query 68 DEGYTQSITLIEGVFSQDEMPIVIEKNLECVVHHAQQIKWLLEYKTQYITQKLKVWIKLN 127
+ G+ I ++EG F ++ L +H Q+K L + + L +++K+N
Sbjct 69 ERGWKGPILMLEGFFHAQDLEAYDTYRLTTCIHSNWQLKAL---QNARLNAPLDIYVKVN 125
Query 128 SGMNRLGFKPDEIIEVIQQLQ--HQGFHCVLTMHFANADVPDHPMNQRQIDQLITIKTAC 185
SGMNRLGF+P+ V QQL+ L HFA A DHP + + I + T
Sbjct 126 SGMNRLGFQPERAQTVWQQLRAMRNVGEMTLMSHFAQA---DHPEGIGEAMRRIALATEG 182
Query 186 APIEISCCNSAAIFNWPELHFDYVRPGIMLYGASPFAE-QNIHQLDLKPVMRFTAHIMAL 244
S NSAA P+ H+D+VRPGI+LYGASP + ++I LKPVM ++ I+ +
Sbjct 183 LQCAYSLSNSAATLWHPQAHYDWVRPGIILYGASPSGQWRDIADTGLKPVMTLSSEIIGV 242
Query 245 NTIKAGEHIGYGSLYTAKTDMTVAIVSIGYGDGYPRAFIAQNFVALGQQLFPIVGRVSMD 304
T+ AGE +GYG Y+ + + IV+ GY DGYPR V + VG VSMD
Sbjct 243 QTLSAGERVGYGGGYSVTQEQRIGIVAAGYADGYPRHAPTGTPVLVDGIRTRTVGTVSMD 302
Query 305 MLAIDVTD-RDIAIDTEIELWGHTRLVDEVASANGTIGYELLCRLSNR 351
MLA+D+T I T +ELWG VD+VASA GT+GYELLC ++ R
Sbjct 303 MLAVDLTPCPQAGIGTPVELWGKEIKVDDVASAAGTLGYELLCAVAPR 350
>Q9HTQ2 Alanine racemase, catabolic [Pseudomonas aeruginosa (strain
ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG
12228 / 1C / PRS 101 / PAO1)]
Length=357
Score = 235 bits (600), Expect = 4e-78
Identities = 133/356 (37%), Positives = 206/356 (58%), Gaps = 9/356 (3%)
Query 1 VRHATVYIDRQALRYNLNRVKQLAPHAKIVSMVKANAYGHGIKDCLAALET-TDSFGVAC 59
+R A ID QALR+N R+ + A A+ ++++KA+AYGHG C AL D F VAC
Sbjct 1 MRPARALIDLQALRHNY-RLAREATGARALAVIKADAYGHGAVRCAEALAAEADGFAVAC 59
Query 60 LAEALEIRDEGYTQSITLIEGVFSQDEMPIVIEKNLECVVHHAQQIKWLLEYKTQYITQK 119
+ E LE+R+ G Q I L+EG F E+ +++ + CVVH A Q++ + + + +
Sbjct 60 IEEGLELREAGIRQPILLLEGFFEASELELIVAHDFWCVVHCAWQLEAI---ERASLARP 116
Query 120 LKVWIKLNSGMNRLGFKPDEIIEVIQQLQHQG--FHCVLTMHFANADVPDHPMNQRQIDQ 177
L VW+K++SGM+R+GF P++ ++L+ G V+ HF+ AD D P + Q+
Sbjct 117 LNVWLKMDSGMHRVGFFPEDFSAAHERLRASGKVAKIVMMSHFSRADELDCPRTEEQLAA 176
Query 178 LITIKTACAPIEISCCNSAAIFNWPELHFDYVRPGIMLYGASPFAEQNIHQLDLKPVMRF 237
EIS NS A+ WP++ D+VRPGI+LYGA+PF + L+PVM
Sbjct 177 FAAASQGLEG-EISLRNSPAVLGWPKVPSDWVRPGILLYGATPFERAHPLADRLRPVMTL 235
Query 238 TAHIMALNTIKAGEHIGYGSLYTAKTDMTVAIVSIGYGDGYPRAFIAQNFVALGQQLFPI 297
+ ++++ + AGE +GYG+ Y+ + + +V++GY DGYPR V + + +
Sbjct 236 ESKVISVRDLPAGEPVGYGARYSTERSQRIGVVAMGYADGYPRHAADGTLVFIDGKPGRL 295
Query 298 VGRVSMDMLAIDVTDRDIA-IDTEIELWGHTRLVDEVASANGTIGYELLCRLSNRP 352
VGRVSMDML +D+TD A + + +ELWG V +A+ G+I Y+LLC L P
Sbjct 296 VGRVSMDMLTVDLTDHPQAGLGSRVELWGPNVPVGALAAQFGSIPYQLLCNLKRVP 351
Lambda K H a alpha
0.325 0.139 0.421 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 2097492
Database: 1b6e53cfacb58b1c22a08c0a32659179.SwissProt.fasta
Posted date: May 30, 2024 12:15 PM
Number of letters in database: 7,888
Number of sequences in database: 22
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
