BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: 82b6f7b8d3fa72c84346e6ccb9100a25.SwissProt.fasta
           18 sequences; 4,399 total letters



Query= ACIAD2451

Length=232
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

Q9KTJ6 Probable D-methionine transport system permease protein Me...  187     5e-63
Q8ZH39 D-methionine transport system permease protein MetI [Yersi...  182     3e-61
Q8ZRN0 D-methionine transport system permease protein MetI [Salmo...  179     4e-60
Q8Z991 D-methionine transport system permease protein MetI [Salmo...  179     4e-60
Q8X800 D-methionine transport system permease protein MetI [Esche...  178     1e-59
P31547 D-methionine transport system permease protein MetI [Esche...  178     1e-59
O32168 Methionine import system permease protein MetP [Bacillus s...  165     1e-54
Q9CK96 Probable D-methionine transport system permease protein Me...  161     4e-53
P46492 Probable D-methionine transport system permease protein Me...  156     3e-51
O34742 Glycine betaine/carnitine/choline transport system permeas...  71.2    2e-18
Q9KHT8 Carnitine transport permease protein OpuCB [Listeria monoc...  69.3    9e-18
G2JZ43 Carnitine transport permease protein OpuCB [Listeria monoc...  69.3    9e-18
P39775 Choline transport system permease protein OpuBD [Bacillus ...  67.4    5e-17
E0SCY2 Glycine betaine/choline transport system permease protein ...  63.2    5e-15
Q45461 Choline transport system permease protein OpuBB [Bacillus ...  61.2    7e-15
Q8ZPK3 Osmoprotectant import permease protein OsmW [Salmonella ty...  60.1    2e-14
P17327 Glycine betaine/proline betaine transport system permease ...  60.5    3e-14
P14176 Glycine betaine/proline betaine transport system permease ...  59.3    8e-14


>Q9KTJ6 Probable D-methionine transport system permease protein 
MetI [Vibrio cholerae serotype O1 (strain ATCC 39315 / El 
Tor Inaba N16961)]
Length=225

 Score = 187 bits (474),  Expect = 5e-63
 Identities = 93/208 (45%), Positives = 148/208 (71%), Gaps = 0/208 (0%)

Query  20   SLSIDQFVTALQETFHMVFFSLLFGGIWGFIQGIVLLVTRPAGILPNRFIYHLLNPIVNA  79
            +L+ D  +TA  +T +MV  +   G   G   G++L  T+  G+L N  +   L  +VN 
Sbjct  11   ALNSDLLLTATWQTLYMVAIAGAVGFALGIPLGVILHTTKKEGLLENLPLNRALGAVVNI  70

Query  80   LRSLPFIILLIAVIPLTKFLVGSSIGTWAAIVPLTIYIGPYMGRLIETSLLEVNEGIIES  139
             RS+PF++L++A+IP+TK +VG+ IGT AAIVPLTI   P++ RLIE++LLEV  G++E+
Sbjct  71   GRSVPFLVLMVAIIPVTKLIVGTFIGTTAAIVPLTIGAIPFVARLIESALLEVPTGLVEA  130

Query  140  AQAMGASPFQIIFKFILPESRSSLILNLTTATISLIGATAMAGAVGAGGIGDLAISYGYQ  199
            AQ+MGA+P QII K +LPE+  +++ ++T   ++L+  +AMAG VG GG+GD+AI YG+ 
Sbjct  131  AQSMGATPLQIIRKVLLPEALPTILNSVTITLVTLVSYSAMAGTVGGGGLGDVAIRYGFH  190

Query  200  RFDTSVVILTVIILLLLVQFIQMLGNWL  227
            R+D +++ +TV++L++LVQ IQ +G+ L
Sbjct  191  RYDITIMAVTVVMLIVLVQIIQSIGDAL  218


>Q8ZH39 D-methionine transport system permease protein MetI [Yersinia 
pestis]
Length=217

 Score = 182 bits (462),  Expect = 3e-61
 Identities = 91/198 (46%), Positives = 135/198 (68%), Gaps = 0/198 (0%)

Query  32   ETFHMVFFSLLFGGIWGFIQGIVLLVTRPAGILPNRFIYHLLNPIVNALRSLPFIILLIA  91
            ET  M F S  FG + G   G++L VTRP  I+ N  IY  L+ +VN  RS+PFIILL+ 
Sbjct  15   ETLMMTFVSGFFGFVLGLPVGVLLYVTRPGQIIANNKIYRTLSGVVNIFRSIPFIILLVW  74

Query  92   VIPLTKFLVGSSIGTWAAIVPLTIYIGPYMGRLIETSLLEVNEGIIESAQAMGASPFQII  151
            +IP T+ +VG+SIG  AAIVPLT+   P++ R++E +LLE+  G++E+A+AMGA+P QII
Sbjct  75   MIPFTRMIVGTSIGLQAAIVPLTVGAAPFIARMVENALLEIPSGLVEAARAMGATPMQII  134

Query  152  FKFILPESRSSLILNLTTATISLIGATAMAGAVGAGGIGDLAISYGYQRFDTSVVILTVI  211
             K +LPE+   L+   T   I+L+G +AM GAVGAGG+G +   YGY  ++ +V+   ++
Sbjct  135  KKVLLPEALPGLVNAATITLITLVGYSAMGGAVGAGGLGQIGYQYGYIGYNATVMNTVLV  194

Query  212  ILLLLVQFIQMLGNWLSK  229
            +L++LV  IQ+ G+ + K
Sbjct  195  LLVILVYLIQLSGDRIVK  212


>Q8ZRN0 D-methionine transport system permease protein MetI [Salmonella 
typhimurium (strain LT2 / SGSC1412 / ATCC 700720)]
Length=217

 Score = 179 bits (454),  Expect = 4e-60
 Identities = 89/199 (45%), Positives = 135/199 (68%), Gaps = 0/199 (0%)

Query  27   VTALQETFHMVFFSLLFGGIWGFIQGIVLLVTRPAGILPNRFIYHLLNPIVNALRSLPFI  86
            V  + ET  M F S  FG + G   G++L VTRP  I+ N  +Y  L+ +VN  RS+PFI
Sbjct  10   VRGVWETLAMTFVSGFFGFVIGLPVGVLLYVTRPGQIMENARLYRSLSAVVNIFRSIPFI  69

Query  87   ILLIAVIPLTKFLVGSSIGTWAAIVPLTIYIGPYMGRLIETSLLEVNEGIIESAQAMGAS  146
            ILL+ +IP T+ +VG+SIG  AAIVPLT+   P++ R++E +LLE+  G+IE+++AMGA+
Sbjct  70   ILLVWMIPFTRIIVGTSIGLQAAIVPLTVGAAPFIARMVENALLEIPAGLIEASRAMGAT  129

Query  147  PFQIIFKFILPESRSSLILNLTTATISLIGATAMAGAVGAGGIGDLAISYGYQRFDTSVV  206
            P QI+ K +LPE+   L+   T   I+L+G +AM GAVGAGG+G +   YGY  ++ +V+
Sbjct  130  PLQIVRKILLPEALPGLVNAATITLITLVGYSAMGGAVGAGGLGQIGYQYGYIGYNATVM  189

Query  207  ILTVIILLLLVQFIQMLGN  225
               +++L++LV  IQ+ G+
Sbjct  190  NTVLVLLVVLVYLIQLSGD  208


>Q8Z991 D-methionine transport system permease protein MetI [Salmonella 
typhi]
Length=217

 Score = 179 bits (454),  Expect = 4e-60
 Identities = 89/199 (45%), Positives = 135/199 (68%), Gaps = 0/199 (0%)

Query  27   VTALQETFHMVFFSLLFGGIWGFIQGIVLLVTRPAGILPNRFIYHLLNPIVNALRSLPFI  86
            V  + ET  M F S  FG + G   G++L VTRP  I+ N  +Y  L+ +VN  RS+PFI
Sbjct  10   VRGVWETLAMTFVSGFFGFVIGLPVGVLLYVTRPGQIMENARLYRSLSAVVNIFRSIPFI  69

Query  87   ILLIAVIPLTKFLVGSSIGTWAAIVPLTIYIGPYMGRLIETSLLEVNEGIIESAQAMGAS  146
            ILL+ +IP T+ +VG+SIG  AAIVPLT+   P++ R++E +LLE+  G+IE+++AMGA+
Sbjct  70   ILLVWMIPFTRIIVGTSIGLQAAIVPLTVGAAPFIARIVENALLEIPAGLIEASRAMGAT  129

Query  147  PFQIIFKFILPESRSSLILNLTTATISLIGATAMAGAVGAGGIGDLAISYGYQRFDTSVV  206
            P QI+ K +LPE+   L+   T   I+L+G +AM GAVGAGG+G +   YGY  ++ +V+
Sbjct  130  PLQIVRKILLPEALPGLVNAATITLITLVGYSAMGGAVGAGGLGQIGYQYGYIGYNATVM  189

Query  207  ILTVIILLLLVQFIQMLGN  225
               +++L++LV  IQ+ G+
Sbjct  190  NTVLVLLVVLVYLIQLSGD  208


>Q8X800 D-methionine transport system permease protein MetI [Escherichia 
coli O157:H7]
Length=217

 Score = 178 bits (451),  Expect = 1e-59
 Identities = 89/199 (45%), Positives = 134/199 (67%), Gaps = 0/199 (0%)

Query  27   VTALQETFHMVFFSLLFGGIWGFIQGIVLLVTRPAGILPNRFIYHLLNPIVNALRSLPFI  86
            V  + ET  M F S  FG + G   G++L VTRP  I+ N  +Y  ++ IVN  RS+PFI
Sbjct  10   VRGVWETLAMTFVSGFFGFVVGLPVGVLLYVTRPGQIIANAKLYRTVSAIVNIFRSIPFI  69

Query  87   ILLIAVIPLTKFLVGSSIGTWAAIVPLTIYIGPYMGRLIETSLLEVNEGIIESAQAMGAS  146
            ILL+ +IP T+ +VG+SIG  AAIVPLT+   P++ R++E +LLE+  G+IE+++AMGA+
Sbjct  70   ILLVWMIPFTRVIVGTSIGLQAAIVPLTVGAAPFIARMVENALLEIPTGLIEASRAMGAT  129

Query  147  PFQIIFKFILPESRSSLILNLTTATISLIGATAMAGAVGAGGIGDLAISYGYQRFDTSVV  206
            P QI+ K +LPE+   L+   T   I+L+G +AM GAVGAGG+G +   YGY  ++ +V+
Sbjct  130  PMQIVRKVLLPEALPGLVNAATITLITLVGYSAMGGAVGAGGLGQIGYQYGYIGYNATVM  189

Query  207  ILTVIILLLLVQFIQMLGN  225
               +++L++LV  IQ  G+
Sbjct  190  NTVLVLLVILVYLIQFAGD  208


>P31547 D-methionine transport system permease protein MetI [Escherichia 
coli (strain K12)]
Length=217

 Score = 178 bits (451),  Expect = 1e-59
 Identities = 89/199 (45%), Positives = 134/199 (67%), Gaps = 0/199 (0%)

Query  27   VTALQETFHMVFFSLLFGGIWGFIQGIVLLVTRPAGILPNRFIYHLLNPIVNALRSLPFI  86
            V  + ET  M F S  FG + G   G++L VTRP  I+ N  +Y  ++ IVN  RS+PFI
Sbjct  10   VRGVWETLAMTFVSGFFGFVIGLPVGVLLYVTRPGQIIANAKLYRTVSAIVNIFRSIPFI  69

Query  87   ILLIAVIPLTKFLVGSSIGTWAAIVPLTIYIGPYMGRLIETSLLEVNEGIIESAQAMGAS  146
            ILL+ +IP T+ +VG+SIG  AAIVPLT+   P++ R++E +LLE+  G+IE+++AMGA+
Sbjct  70   ILLVWMIPFTRVIVGTSIGLQAAIVPLTVGAAPFIARMVENALLEIPTGLIEASRAMGAT  129

Query  147  PFQIIFKFILPESRSSLILNLTTATISLIGATAMAGAVGAGGIGDLAISYGYQRFDTSVV  206
            P QI+ K +LPE+   L+   T   I+L+G +AM GAVGAGG+G +   YGY  ++ +V+
Sbjct  130  PMQIVRKVLLPEALPGLVNAATITLITLVGYSAMGGAVGAGGLGQIGYQYGYIGYNATVM  189

Query  207  ILTVIILLLLVQFIQMLGN  225
               +++L++LV  IQ  G+
Sbjct  190  NTVLVLLVILVYLIQFAGD  208


>O32168 Methionine import system permease protein MetP [Bacillus 
subtilis (strain 168)]
Length=222

 Score = 165 bits (418),  Expect = 1e-54
 Identities = 82/211 (39%), Positives = 137/211 (65%), Gaps = 0/211 (0%)

Query  20   SLSIDQFVTALQETFHMVFFSLLFGGIWGFIQGIVLLVTRPAGILPNRFIYHLLNPIVNA  79
            ++ + +   A  ET +M   SLLF  + G I G++L +T    +  N+ +  ++  +VN 
Sbjct  8    NVDLTELWNATYETLYMTLISLLFAFVIGVILGLLLFLTSKGSLWQNKAVNSVIAAVVNI  67

Query  80   LRSLPFIILLIAVIPLTKFLVGSSIGTWAAIVPLTIYIGPYMGRLIETSLLEVNEGIIES  139
             RS+PF+IL+I ++  TKFLVG+ +G  AA+  L I   P+  RL+E +L EV++G+IE+
Sbjct  68   FRSIPFLILIILLLGFTKFLVGTILGPNAALPALVIGSAPFYARLVEIALREVDKGVIEA  127

Query  140  AQAMGASPFQIIFKFILPESRSSLILNLTTATISLIGATAMAGAVGAGGIGDLAISYGYQ  199
            A++MGA    IIFK ++PES  +LI  +T   I+LIG+TA+AGA+G+GG+G+LA   GYQ
Sbjct  128  AKSMGAKTSTIIFKVLIPESMPALISGITVTAIALIGSTAIAGAIGSGGLGNLAYVEGYQ  187

Query  200  RFDTSVVILTVIILLLLVQFIQMLGNWLSKL  230
              +  V  +  + +L++V  IQ++G+ ++ +
Sbjct  188  SNNADVTFVATVFILIIVFIIQIIGDLITNI  218


>Q9CK96 Probable D-methionine transport system permease protein 
MetI [Pasteurella multocida (strain Pm70)]
Length=217

 Score = 161 bits (408),  Expect = 4e-53
 Identities = 88/198 (44%), Positives = 131/198 (66%), Gaps = 0/198 (0%)

Query  32   ETFHMVFFSLLFGGIWGFIQGIVLLVTRPAGILPNRFIYHLLNPIVNALRSLPFIILLIA  91
            ET +M F + LF  + G   G++  +T    IL NR    +LN I+N  RS+PFIILLI 
Sbjct  15   ETLYMGFIATLFAIVIGLPIGLLAFLTGKGEILENRRANQVLNVIINIGRSVPFIILLII  74

Query  92   VIPLTKFLVGSSIGTWAAIVPLTIYIGPYMGRLIETSLLEVNEGIIESAQAMGASPFQII  151
            ++P T+ +VG+++GT AAIVPL++   P+  RL   +LLE+  G+ E+A++MGA+ +QI+
Sbjct  75   LLPFTRLVVGTTLGTTAAIVPLSVSAIPFFARLTANALLEIPSGLTEAAKSMGATNWQIV  134

Query  152  FKFILPESRSSLILNLTTATISLIGATAMAGAVGAGGIGDLAISYGYQRFDTSVVILTVI  211
             K+ LPES   LI  +T   ++LIG +AMAGAVG GG+G+LAI+YG  R    V  +  I
Sbjct  135  TKYYLPESIPILINGITLTLVALIGYSAMAGAVGGGGLGNLAITYGEHRNMIYVKWIATI  194

Query  212  ILLLLVQFIQMLGNWLSK  229
            I++L+V   Q LG+ L++
Sbjct  195  IIVLIVMLSQKLGDHLAE  212


>P46492 Probable D-methionine transport system permease protein 
MetI [Haemophilus influenzae (strain ATCC 51907 / DSM 11121 
/ KW20 / Rd)]
Length=213

 Score = 156 bits (395),  Expect = 3e-51
 Identities = 87/202 (43%), Positives = 129/202 (64%), Gaps = 0/202 (0%)

Query  28   TALQETFHMVFFSLLFGGIWGFIQGIVLLVTRPAGILPNRFIYHLLNPIVNALRSLPFII  87
            TA  ET ++ F S L   + G   GI   +T    IL N   + +LN I+N  RS+PFII
Sbjct  7    TATYETVYISFASTLLAVLVGVPVGIWTFLTGKNEILQNNRTHFVLNTIINIGRSIPFII  66

Query  88   LLIAVIPLTKFLVGSSIGTWAAIVPLTIYIGPYMGRLIETSLLEVNEGIIESAQAMGASP  147
            LL+ ++P+T+F+VG+ +GT AAI+PL+I   P++ RL   +L+E+  G+ E+AQAMGA+ 
Sbjct  67   LLLILLPVTRFIVGTVLGTTAAIIPLSICAMPFVARLTANALMEIPNGLTEAAQAMGATK  126

Query  148  FQIIFKFILPESRSSLILNLTTATISLIGATAMAGAVGAGGIGDLAISYGYQRFDTSVVI  207
            +QI+ KF L E+  +LI  +T   ++L+G +AMAG  G GG+G LAI+YG  R    V  
Sbjct  127  WQIVRKFYLSEALPTLINGVTLTLVTLVGYSAMAGTQGGGGLGSLAINYGRIRNMPYVTW  186

Query  208  LTVIILLLLVQFIQMLGNWLSK  229
            +  II++L V   Q LG+ L+K
Sbjct  187  VATIIIVLFVMISQKLGDTLAK  208


>O34742 Glycine betaine/carnitine/choline transport system permease 
protein OpuCD [Bacillus subtilis (strain 168)]
Length=229

 Score = 71.2 bits (173),  Expect = 2e-18
 Identities = 56/200 (28%), Positives = 99/200 (50%), Gaps = 11/200 (6%)

Query  30   LQETFHMVFFSLLFGGIWGFIQGIVLLVTRPAGILPNRFIYHLLNPIVNALRSLPFIILL  89
            LQE F+  F   ++G ++  I GI      P GIL  R  Y  L+  V A+ ++   I  
Sbjct  19   LQE-FYRHFLMSVYGVLFAAIVGI------PLGILIAR--YRRLSGWVFAVTNVIQTIPA  69

Query  90   IAVIPLTKFLVGSSIGTWAAIVPLTIYIGPYMGRLIETSLLEVNEGIIESAQAMGASPFQ  149
            +A++ +   ++G  +G    I+ L +Y    + R   T ++ +    +ES +AMG + FQ
Sbjct  70   LAMLAVLMLVMG--LGANTVILSLFLYSLLPIIRNTYTGIISIEHAYLESGKAMGMTKFQ  127

Query  150  IIFKFILPESRSSLILNLTTATISLIGATAMAGAVGAGGIGDLAISYGYQRFDTSVVILT  209
            ++    LP + S ++  L TA +  IG TA+   VGAGG+GD+ +        T++++  
Sbjct  128  VLRMVELPLALSVIMAGLRTALVIAIGITAIGTFVGAGGLGDIIVRGSNATNGTAIILAG  187

Query  210  VIILLLLVQFIQMLGNWLSK  229
             I   L+     ++  WL +
Sbjct  188  AIPTALMAVIADLVMGWLER  207


>Q9KHT8 Carnitine transport permease protein OpuCB [Listeria monocytogenes]
Length=218

 Score = 69.3 bits (168),  Expect = 9e-18
 Identities = 58/205 (28%), Positives = 101/205 (49%), Gaps = 17/205 (8%)

Query  23   IDQFVTALQETFHMVFFSL---LFGGIWGFIQGIVLLVTRPAGILPNRF--IYHLLNPIV  77
            +D  VT  QE  H +       LF  +   I GI + V  P GIL  R   + + +  +V
Sbjct  1    MDAIVTFFQENGHNLLVQTWQHLFISLSAVILGIAVAV--PTGILLTRSPKVANFVIGVV  58

Query  78   NALRSLPFIILLIAVIPLTKFLVGSSIGTWAAIVPLTIYIGPYMGRLIETSLLEVNEGII  137
            + L+++P + +L  +IP         +GT  AI+ L IY    + R     +  V++ +I
Sbjct  59   SVLQTVPSLAILAFIIPFL------GVGTLPAIIALFIYALLPILRNTFIGVRGVDKNLI  112

Query  138  ESAQAMGASPFQIIFKFILPESRSSLILNLTTATISLIGATAMAGAVGAGGIGDLAISYG  197
            ES + MG + +Q+I    +P S S ++  +  + + +I    +A  +GAGG+GD  I  G
Sbjct  113  ESGRGMGMTNWQLIVNVEIPNSISVIMAGIRLSAVYVIAWATLASYIGAGGLGDF-IFNG  171

Query  198  YQRFDTSVVI---LTVIILLLLVQF  219
               +   +++   + V IL L+V+F
Sbjct  172  LNLYRPDLILGGAIPVTILALVVEF  196


>G2JZ43 Carnitine transport permease protein OpuCB [Listeria monocytogenes 
serotype 1/2a (strain 10403S)]
Length=218

 Score = 69.3 bits (168),  Expect = 9e-18
 Identities = 58/205 (28%), Positives = 101/205 (49%), Gaps = 17/205 (8%)

Query  23   IDQFVTALQETFHMVFFSL---LFGGIWGFIQGIVLLVTRPAGILPNRF--IYHLLNPIV  77
            +D  VT  QE  H +       LF  +   I GI + V  P GIL  R   + + +  +V
Sbjct  1    MDAIVTFFQENGHNLLVQTWQHLFISLSAVILGIAVAV--PTGILLTRSPKVANFVIGVV  58

Query  78   NALRSLPFIILLIAVIPLTKFLVGSSIGTWAAIVPLTIYIGPYMGRLIETSLLEVNEGII  137
            + L+++P + +L  +IP         +GT  AI+ L IY    + R     +  V++ +I
Sbjct  59   SVLQTVPSLAILAFIIPFL------GVGTLPAIIALFIYALLPILRNTFIGVRGVDKNLI  112

Query  138  ESAQAMGASPFQIIFKFILPESRSSLILNLTTATISLIGATAMAGAVGAGGIGDLAISYG  197
            ES + MG + +Q+I    +P S S ++  +  + + +I    +A  +GAGG+GD  I  G
Sbjct  113  ESGRGMGMTNWQLIVNVEIPNSISVIMAGIRLSAVYVIAWATLASYIGAGGLGDF-IFNG  171

Query  198  YQRFDTSVVI---LTVIILLLLVQF  219
               +   +++   + V IL L+V+F
Sbjct  172  LNLYRPDLILGGAIPVTILALVVEF  196


>P39775 Choline transport system permease protein OpuBD [Bacillus 
subtilis (strain 168)]
Length=226

 Score = 67.4 bits (163),  Expect = 5e-17
 Identities = 56/214 (26%), Positives = 99/214 (46%), Gaps = 22/214 (10%)

Query  18   NSSLSIDQFVTALQETFHMVFFSLLFGGIWGFIQGIVLLVTRPAGILPNRF--IYHLLNP  75
            N S  +D+F       F M  + +LF  + G           PAGIL   F  +   +  
Sbjct  14   NGSYVMDEF----GRHFLMSAYGVLFAAVVGV----------PAGILIAHFRRLSAWVFA  59

Query  76   IVNALRSLPFIILLIAVIPLTKFLVGSSIGTWAAIVPLTIYIGPYMGRLIETSLLEVNEG  135
            + N ++++P + +L AV+ L        +G    I+ L +Y    + R   T ++ +   
Sbjct  60   VTNVIQTIPALAML-AVLMLVM-----GLGANTVILSLFLYSLLPIIRNTYTGIISIEHA  113

Query  136  IIESAQAMGASPFQIIFKFILPESRSSLILNLTTATISLIGATAMAGAVGAGGIGDLAIS  195
             +ES +AMG + FQ++    LP + S ++  L TA +  IG TA+   VGAGG+GD+ + 
Sbjct  114  YLESGKAMGMTKFQVLRMVELPLALSVIMAGLRTALVIAIGITAIGTFVGAGGLGDMIVR  173

Query  196  YGYQRFDTSVVILTVIILLLLVQFIQMLGNWLSK  229
                   T++++   I   ++     +L  WL +
Sbjct  174  GSNATNGTAIILAGAIPTAVMAVGADLLMAWLER  207


>E0SCY2 Glycine betaine/choline transport system permease protein 
OusW [Dickeya dadantii (strain 3937)]
Length=406

 Score = 63.2 bits (152),  Expect = 5e-15
 Identities = 49/196 (25%), Positives = 92/196 (47%), Gaps = 19/196 (10%)

Query  33   TFHMVFFSLLFGGIWGFIQGIVLLVTRPAGILPNRFIYHLLNPIVNALRSLPFIILLIAV  92
            T  +V  +L F  I G   GI L  +  A          ++ P+++A+++ P  + LI +
Sbjct  197  TLALVLTALFFCVIIGLPLGIWLAHSDRAA--------RIVRPLLDAMQTTPAFVYLIPI  248

Query  93   IPLTKFLVGSSIGTWAAIVPLTIYIGPYMGRLIETSLLEVNEGIIESAQAMGASPFQIIF  152
            + L        IG    +V   I+  P + RL    + +V   ++E+AQ+ GASP Q++F
Sbjct  249  VMLF------GIGNVPGVVVTIIFALPPIIRLTILGIRQVPADLVEAAQSFGASPRQMLF  302

Query  153  KFILPESRSSLILNLTTATISLIGATAMAGAVGAGGIGDLAISYGYQRFDTSVVIL----  208
            K  LP +  +++  +    +  +    +A  +  GG+G + +  G  R D  +  +    
Sbjct  303  KVQLPLAMPTIMAGINQTLMLALSMVVIASMIAVGGLGQMVLR-GIGRLDMGLASIGGVG  361

Query  209  TVIILLLLVQFIQMLG  224
             VI+ ++L +  Q LG
Sbjct  362  IVILAIILDRLTQSLG  377


>Q45461 Choline transport system permease protein OpuBB [Bacillus 
subtilis (strain 168)]
Length=217

 Score = 61.2 bits (147),  Expect = 7e-15
 Identities = 53/196 (27%), Positives = 95/196 (48%), Gaps = 19/196 (10%)

Query  30   LQETFHMVFFSLLFGGIWGFIQGIVLLVTRPAGILPNRFIYHL--LNPIVNALRSLPFII  87
            L +T+  +  SL+       I G+++ V  P G++  R       +  IVN +++LP + 
Sbjct  16   LYKTYEHITISLI-----AVILGVLVAV--PLGVVLTRMKKGAGTIIGIVNIIQTLPSLA  68

Query  88   LLIAVIPLTKFLVGSSIGTWAAIVPLTIYIGPYMGRLIETSLLEVNEGIIESAQAMGASP  147
            +L   IPL        +G   AIV L  Y    + R   T +  VN+ ++ES + +G +P
Sbjct  69   ILAFFIPLL------GVGKVPAIVALFFYSVLPILRNTYTGIRGVNKNLLESGKGIGMTP  122

Query  148  FQIIFKFILPESRSSLILNLTTATISLIGATAMAGAVGAGGIGDLAISYGYQRFDTSVVI  207
             + +    LP +   ++  + T+TI LIG   +A  +G GG+GD  I  G   +    +I
Sbjct  123  AEQVRLVELPLAAPVIMAGIRTSTIYLIGWATLASFIGGGGLGDY-IFIGLNLYQPEYII  181

Query  208  ---LTVIILLLLVQFI  220
               + V IL +++ ++
Sbjct  182  GGAVPVTILAIVIDYV  197


>Q8ZPK3 Osmoprotectant import permease protein OsmW [Salmonella 
typhimurium (strain LT2 / SGSC1412 / ATCC 700720)]
Length=215

 Score = 60.1 bits (144),  Expect = 2e-14
 Identities = 51/189 (27%), Positives = 93/189 (49%), Gaps = 8/189 (4%)

Query  40   SLLFGGIW--GFIQGIVLLVTRPAGILPNRFIYHLLNPIVNA---LRSLPFIILLIAVIP  94
            SL F  +W      G+ +++  P G+L  R  + L  P++ A   L ++P I L   +IP
Sbjct  16   SLTFQHLWLVALAVGLAIIIGVPLGVLIVRHKW-LATPVLGAATLLLTIPSIALFGLMIP  74

Query  95   LTKFLVGSSIGTWAAIVPLTIYIGPYMGRLIETSLLEVNEGIIESAQAMGASPFQIIFKF  154
            L   L+G  IG   A+  + +Y    + R   T+L  +  G+ E+ + +G + +Q +   
Sbjct  75   LFS-LIGHGIGVLPAVTAVFLYSLLPIVRNTHTALDSLPPGLREAGRGIGMTFWQRLRWV  133

Query  155  ILPESRSSLILNLTTATISLIGATAMAGAVGAGGIGDLAISYGYQRFDTSVVILTVIILL  214
             +P +   +   + TA +  IG  A+A  +GAGG+G L ++ G    D  ++I   +++ 
Sbjct  134  EIPMALPVIFGGIRTAVVMNIGVMAIAAVIGAGGLGLLLLN-GISGSDIRMLIAGALMIC  192

Query  215  LLVQFIQML  223
            LL   +  L
Sbjct  193  LLAIVLDWL  201


>P17327 Glycine betaine/proline betaine transport system permease 
protein ProW [Salmonella typhimurium (strain LT2 / SGSC1412 
/ ATCC 700720)]
Length=354

 Score = 60.5 bits (145),  Expect = 3e-14
 Identities = 46/196 (23%), Positives = 93/196 (47%), Gaps = 19/196 (10%)

Query  33   TFHMVFFSLLFGGIWGFIQGIVLLVTRPAGILPNRFIYHLLNPIVNALRSLPFIILLIAV  92
            T  +V  +LLF  + G   GI L  +  A          ++ P+++A+++ P  + L+ +
Sbjct  148  TLALVLTALLFCVVIGLPMGIWLARSPRAA--------KIVRPLLDAMQTTPAFVYLVPI  199

Query  93   IPLTKFLVGSSIGTWAAIVPLTIYIGPYMGRLIETSLLEVNEGIIESAQAMGASPFQIIF  152
            + L        IG    +V   I+  P + RL    + +V   +IE++++ GASP Q++F
Sbjct  200  VMLF------GIGNVPGVVVTIIFALPPIVRLTILGINQVPADLIEASRSFGASPRQMLF  253

Query  153  KFILPESRSSLILNLTTATISLIGATAMAGAVGAGGIGDLAISYGYQRFDTSVVIL----  208
            K  LP +  +++  +    +  +    +A  +  GG+G + +  G  R D  +  +    
Sbjct  254  KVQLPLAMPTIMAGVNQTLMLALSMVVIASMIAVGGLGQMVLR-GIGRLDMGLATVGGVG  312

Query  209  TVIILLLLVQFIQMLG  224
             VI+ ++L +  Q +G
Sbjct  313  IVILAIILDRLTQAVG  328


 Score = 16.5 bits (31),  Expect = 8.4
 Identities = 28/115 (24%), Positives = 51/115 (44%), Gaps = 23/115 (20%)

Query  12   LTQPFWNSSLSIDQFVTALQETFHMVFFSLLFGGIW--------GFIQGIVLLVTRPAGI  63
            L  PF  + + +D +VT   + + +  F  LF GI         GF Q ++L +  P  I
Sbjct  53   LLDPFHKTLIPLDSWVTEGID-WVVTHFRPLFQGIRVPVDYILNGF-QQLLLGMPAPVAI  110

Query  64   LPNRFIYHLLNPIVNALRSLPFIILLIAVIPLTKFLVGSSIGTWA-AIVPLTIYI  117
            +    I   ++ +   + +L   I LIA+          +IG W+ A++ L + +
Sbjct  111  ILFALIAWQVSGVGMGIATL---ISLIAI---------GAIGAWSQAMITLALVL  153


>P14176 Glycine betaine/proline betaine transport system permease 
protein ProW [Escherichia coli (strain K12)]
Length=354

 Score = 59.3 bits (142),  Expect = 8e-14
 Identities = 46/196 (23%), Positives = 93/196 (47%), Gaps = 19/196 (10%)

Query  33   TFHMVFFSLLFGGIWGFIQGIVLLVTRPAGILPNRFIYHLLNPIVNALRSLPFIILLIAV  92
            T  +V  +LLF  + G   GI L  +  A          ++ P+++A+++ P  + L+ +
Sbjct  148  TLALVLTALLFCIVIGLPLGIWLARSPRAA--------KIIRPLLDAMQTTPAFVYLVPI  199

Query  93   IPLTKFLVGSSIGTWAAIVPLTIYIGPYMGRLIETSLLEVNEGIIESAQAMGASPFQIIF  152
            + L        IG    +V   I+  P + RL    + +V   +IE++++ GASP Q++F
Sbjct  200  VMLF------GIGNVPGVVVTIIFALPPIIRLTILGINQVPADLIEASRSFGASPRQMLF  253

Query  153  KFILPESRSSLILNLTTATISLIGATAMAGAVGAGGIGDLAISYGYQRFDTSVVIL----  208
            K  LP +  +++  +    +  +    +A  +  GG+G + +  G  R D  +  +    
Sbjct  254  KVQLPLAMPTIMAGVNQTLMLALSMVVIASMIAVGGLGQMVLR-GIGRLDMGLATVGGVG  312

Query  209  TVIILLLLVQFIQMLG  224
             VI+ ++L +  Q +G
Sbjct  313  IVILAIILDRLTQAVG  328


 Score = 16.5 bits (31),  Expect = 8.4
 Identities = 8/29 (28%), Positives = 15/29 (52%), Gaps = 1/29 (3%)

Query  90   IAVIPLTKFLVGSSIGTWA-AIVPLTIYI  117
            + V  L   +   +IG W+ A+V L + +
Sbjct  125  MGVATLVSLIAIGAIGAWSQAMVTLALVL  153



Lambda      K        H        a         alpha
   0.331    0.146    0.437    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 692170


  Database: 82b6f7b8d3fa72c84346e6ccb9100a25.SwissProt.fasta
    Posted date:  May 9, 2024  3:13 PM
  Number of letters in database: 4,399
  Number of sequences in database:  18



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40