BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: 5636949f47fca556c5cbc59314fa3d9d.SwissProt.fasta
           1 sequences; 418 total letters



Query= ACIAD2483

Length=204
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

Q98QK8 GTPase Obg [Mycoplasmopsis pulmonis (strain UAB CTIP)]         34.3    1e-06


>Q98QK8 GTPase Obg [Mycoplasmopsis pulmonis (strain UAB CTIP)]
Length=418

 Score = 34.3 bits (77),  Expect = 1e-06
 Identities = 25/56 (45%), Positives = 32/56 (57%), Gaps = 6/56 (11%)

Query  44   YALALEMSDKL----KAKQEQFEKKHGRSAK--PNFDILRIFAEKQDELDELVEAI  93
            Y L LE  D++    K  QE FEKK    +K  PN  I+ I A KQ+ LD+L EA+
Sbjct  264  YNLNLEEKDEVIVANKKDQECFEKKLEEFSKHYPNKKIIAISALKQENLDKLKEAL  319


 Score = 14.6 bits (26),  Expect = 2.9
 Identities = 6/19 (32%), Positives = 10/19 (53%), Gaps = 0/19 (0%)

Query  184  GLPDSYGLARKESPFALPV  202
            G  + YG A ++    +PV
Sbjct  74   GRKNLYGAAGEDKFIKVPV  92


 Score = 13.9 bits (24),  Expect = 5.0
 Identities = 12/49 (24%), Positives = 19/49 (39%), Gaps = 3/49 (6%)

Query  57   KQEQFEKKHGRSAKPNFDILRIFAEKQDELDELVEA---IKGHWKIRDY  102
            K   F ++   +   N     +  +K    DEL++    I    KI DY
Sbjct  363  KIHHFYQRIPLNTHDNLMRFNLILKKMGVWDELIKQGIQIGDSVKIYDY  411



Lambda      K        H        a         alpha
   0.322    0.138    0.402    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 69776


  Database: 5636949f47fca556c5cbc59314fa3d9d.SwissProt.fasta
    Posted date:  May 29, 2024  9:11 PM
  Number of letters in database: 418
  Number of sequences in database:  1



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40