Comparative Genomics

ACIAD2505 / SwissProt Alignments

BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: 7ea756d3c27fd50c4b4950552477784a.SwissProt.fasta
           17 sequences; 4,177 total letters



Query= ACIAD2505

Length=256
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

Q6F9J1 Pyrroloquinoline-quinone synthase [Acinetobacter baylyi (s...  537     0.0   
B2VL12 Pyrroloquinoline-quinone synthase [Erwinia tasmaniensis (s...  416     1e-152
A7MN58 Pyrroloquinoline-quinone synthase [Cronobacter sakazakii (...  411     1e-150
A6T9H1 Pyrroloquinoline-quinone synthase [Klebsiella pneumoniae s...  402     2e-147
B5XX60 Pyrroloquinoline-quinone synthase [Klebsiella pneumoniae (...  402     2e-147
P27505 Pyrroloquinoline-quinone synthase [Klebsiella pneumoniae]      402     5e-147
A4XTR2 Pyrroloquinoline-quinone synthase [Pseudomonas mendocina (...  393     2e-143
Q9I2C2 Pyrroloquinoline-quinone synthase [Pseudomonas aeruginosa ...  388     1e-141
Q02LD4 Pyrroloquinoline-quinone synthase [Pseudomonas aeruginosa ...  388     1e-141
B7VAB8 Pyrroloquinoline-quinone synthase [Pseudomonas aeruginosa ...  388     1e-141
C1DEW7 Pyrroloquinoline-quinone synthase [Azotobacter vinelandii ...  387     4e-141
B1JDZ8 Pyrroloquinoline-quinone synthase [Pseudomonas putida (str...  382     3e-139
Q88QV6 Pyrroloquinoline-quinone synthase [Pseudomonas putida (str...  380     1e-138
P07780 Pyrroloquinoline-quinone synthase [Acinetobacter calcoacet...  363     1e-131
Q49150 Pyrroloquinoline-quinone synthase / PqqA binding protein [...  207     8e-69 
Q9L3B2 Pyrroloquinoline-quinone synthase [Gluconobacter oxydans (...  196     3e-66 
Q50438 Pyrroloquinoline-quinone synthase [Methylobacillus flagell...  62.0    2e-16 


>Q6F9J1 Pyrroloquinoline-quinone synthase [Acinetobacter baylyi 
(strain ATCC 33305 / BD413 / ADP1)]
Length=255

 Score = 537 bits (1384),  Expect = 0.0
 Identities = 254/255 (99%), Positives = 255/255 (100%), Gaps = 0/255 (0%)

Query  1    LRFNMTTTLFSPAEFEQALRDKGRYYHIHHPYHIMMNDGHATKQQIQGWVANRFYYQVNI  60
            +RFNMTTTLFSPAEFEQALRDKGRYYHIHHPYHIMMNDGHATKQQIQGWVANRFYYQVNI
Sbjct  1    MRFNMTTTLFSPAEFEQALRDKGRYYHIHHPYHIMMNDGHATKQQIQGWVANRFYYQVNI  60

Query  61   PLKDAAIMANCPDPATRRKWVQRILDHDGQHDDHGGIEAWLRLGEAVGLDRETILSQKMV  120
            PLKDAAIMANCPDPATRRKWVQRILDHDGQHDDHGGIEAWLRLGEAVGLDRETILSQKMV
Sbjct  61   PLKDAAIMANCPDPATRRKWVQRILDHDGQHDDHGGIEAWLRLGEAVGLDRETILSQKMV  120

Query  121  LPSVRFAVDAYVNFARRACWQEAACSSLTELFAPAIHQSRLDTWPTHYPWIDAEGYAYFR  180
            LPSVRFAVDAYVNFARRACWQEAACSSLTELFAPAIHQSRLDTWPTHYPWIDAEGYAYFR
Sbjct  121  LPSVRFAVDAYVNFARRACWQEAACSSLTELFAPAIHQSRLDTWPTHYPWIDAEGYAYFR  180

Query  181  GRLSQANRDVEHGLELALEYCNTVDRQQRMLNILQFKLDILWTILDGMSMAYVLERAPYH  240
            GRLSQANRDVEHGLELALEYCNTVDRQQRMLNILQFKLDILWTILDGMSMAYVLERAPYH
Sbjct  181  GRLSQANRDVEHGLELALEYCNTVDRQQRMLNILQFKLDILWTILDGMSMAYVLERAPYH  240

Query  241  TVTQEAVWHQKGLLG  255
            TVTQEAVWHQKGLLG
Sbjct  241  TVTQEAVWHQKGLLG  255


>B2VL12 Pyrroloquinoline-quinone synthase [Erwinia tasmaniensis 
(strain DSM 17950 / CFBP 7177 / CIP 109463 / NCPPB 4357 / 
Et1/99)]
Length=251

 Score = 416 bits (1069),  Expect = 1e-152
 Identities = 192/246 (78%), Positives = 215/246 (87%), Gaps = 0/246 (0%)

Query  9    LFSPAEFEQALRDKGRYYHIHHPYHIMMNDGHATKQQIQGWVANRFYYQVNIPLKDAAIM  68
            L +P +FEQALR +G YYHI+HPYHI M++G AT++QIQGWVANRFYYQ  IPLKDAAIM
Sbjct  6    LMTPQQFEQALRARGAYYHIYHPYHIAMHNGEATREQIQGWVANRFYYQTRIPLKDAAIM  65

Query  69   ANCPDPATRRKWVQRILDHDGQHDDHGGIEAWLRLGEAVGLDRETILSQKMVLPSVRFAV  128
            ANCPD ATRRKWVQRILDHDG  D  GGIEAWLRLGEAVGLDRE +LS+++VLP VRFAV
Sbjct  66   ANCPDAATRRKWVQRILDHDGHDDSDGGIEAWLRLGEAVGLDREVLLSEQLVLPGVRFAV  125

Query  129  DAYVNFARRACWQEAACSSLTELFAPAIHQSRLDTWPTHYPWIDAEGYAYFRGRLSQANR  188
            DAYV+FARRA WQEAACSSLTELFAP IHQSRLD+WP HYPWI+ EGY YFRGRL QA R
Sbjct  126  DAYVSFARRAVWQEAACSSLTELFAPEIHQSRLDSWPQHYPWIEEEGYGYFRGRLGQARR  185

Query  189  DVEHGLELALEYCNTVDRQQRMLNILQFKLDILWTILDGMSMAYVLERAPYHTVTQEAVW  248
            DVEHGL+LAL YCN+V++QQRML ILQFKLDILW++LD M+MAY L RAPYHTVT + VW
Sbjct  186  DVEHGLQLALAYCNSVEKQQRMLEILQFKLDILWSMLDAMTMAYTLNRAPYHTVTDQPVW  245

Query  249  HQKGLL  254
            HQ  LL
Sbjct  246  HQGKLL  251


>A7MN58 Pyrroloquinoline-quinone synthase [Cronobacter sakazakii 
(strain ATCC BAA-894)]
Length=251

 Score = 411 bits (1056),  Expect = 1e-150
 Identities = 188/246 (76%), Positives = 216/246 (88%), Gaps = 0/246 (0%)

Query  9    LFSPAEFEQALRDKGRYYHIHHPYHIMMNDGHATKQQIQGWVANRFYYQVNIPLKDAAIM  68
            L +P EFE ALR KG +YHIHHPYHI M++G AT++QIQGWVANRFYYQ +IP+KDAAIM
Sbjct  6    LLTPDEFEAALRAKGAFYHIHHPYHIAMHNGEATREQIQGWVANRFYYQTSIPIKDAAIM  65

Query  69   ANCPDPATRRKWVQRILDHDGQHDDHGGIEAWLRLGEAVGLDRETILSQKMVLPSVRFAV  128
            ANCP P  RR+WVQRILDHDG     GGIEAWLRLGEAVGL RE++LS++ VLP VRFAV
Sbjct  66   ANCPHPEVRRQWVQRILDHDGYDGSEGGIEAWLRLGEAVGLSRESLLSEERVLPGVRFAV  125

Query  129  DAYVNFARRACWQEAACSSLTELFAPAIHQSRLDTWPTHYPWIDAEGYAYFRGRLSQANR  188
            DAYVNFARRACW+EAACSSLTELFAP IHQ+RLD+WP HY WI+AEGY YFR RL+QA R
Sbjct  126  DAYVNFARRACWEEAACSSLTELFAPQIHQARLDSWPQHYTWIEAEGYDYFRSRLNQARR  185

Query  189  DVEHGLELALEYCNTVDRQQRMLNILQFKLDILWTILDGMSMAYVLERAPYHTVTQEAVW  248
            DVEHGL LALEYCNT++RQQRML ILQFKLDILW++LD M+MAY L+RAPYHTVT+EAVW
Sbjct  186  DVEHGLSLALEYCNTMERQQRMLEILQFKLDILWSMLDAMTMAYTLDRAPYHTVTREAVW  245

Query  249  HQKGLL  254
            H++ L+
Sbjct  246  HKRRLV  251


>A6T9H1 Pyrroloquinoline-quinone synthase [Klebsiella pneumoniae 
subsp. pneumoniae (strain ATCC 700721 / MGH 78578)]
Length=251

 Score = 402 bits (1034),  Expect = 2e-147
 Identities = 185/250 (74%), Positives = 210/250 (84%), Gaps = 0/250 (0%)

Query  5    MTTTLFSPAEFEQALRDKGRYYHIHHPYHIMMNDGHATKQQIQGWVANRFYYQVNIPLKD  64
            + T   SP  FE+ALR KG +YHIHHPYHI M++G+AT++QIQGWVANRFYYQ  IPLKD
Sbjct  2    LITDTLSPQAFEEALRAKGDFYHIHHPYHIAMHNGNATREQIQGWVANRFYYQTTIPLKD  61

Query  65   AAIMANCPDPATRRKWVQRILDHDGQHDDHGGIEAWLRLGEAVGLDRETILSQKMVLPSV  124
            AAIMANCPD  TRRKWVQRILDHDG H + GGIEAWLRLGEAVGL R+ +LS++ VLP V
Sbjct  62   AAIMANCPDAQTRRKWVQRILDHDGSHGEDGGIEAWLRLGEAVGLSRDDLLSERHVLPGV  121

Query  125  RFAVDAYVNFARRACWQEAACSSLTELFAPAIHQSRLDTWPTHYPWIDAEGYAYFRGRLS  184
            RFAVDAY+NFARRACWQEAACSSLTELFAP IHQSRLD+WP HYPWI  EGY YFR RLS
Sbjct  122  RFAVDAYLNFARRACWQEAACSSLTELFAPQIHQSRLDSWPQHYPWIKEEGYFYFRSRLS  181

Query  185  QANRDVEHGLELALEYCNTVDRQQRMLNILQFKLDILWTILDGMSMAYVLERAPYHTVTQ  244
            QANRDVEHGL LA  YC++ ++Q RML ILQFKLDILW++LD M+MAY L+R PYHTVT 
Sbjct  182  QANRDVEHGLALAKAYCDSAEKQNRMLEILQFKLDILWSMLDAMTMAYALQRPPYHTVTD  241

Query  245  EAVWHQKGLL  254
            +A WH   L+
Sbjct  242  KAAWHTTRLV  251


>B5XX60 Pyrroloquinoline-quinone synthase [Klebsiella pneumoniae 
(strain 342)]
Length=251

 Score = 402 bits (1034),  Expect = 2e-147
 Identities = 185/250 (74%), Positives = 209/250 (84%), Gaps = 0/250 (0%)

Query  5    MTTTLFSPAEFEQALRDKGRYYHIHHPYHIMMNDGHATKQQIQGWVANRFYYQVNIPLKD  64
            + T   SP  FE+ALR KG +YHIHHPYHI M++G AT++QIQGWVANRFYYQ  IPLKD
Sbjct  2    LITDTLSPQAFEEALRAKGAFYHIHHPYHIAMHNGEATREQIQGWVANRFYYQTTIPLKD  61

Query  65   AAIMANCPDPATRRKWVQRILDHDGQHDDHGGIEAWLRLGEAVGLDRETILSQKMVLPSV  124
            AAIMANCPD  TRRKWVQRILDHDG H + GGIEAWLRLGEAVGL R+ +LS++ VLP V
Sbjct  62   AAIMANCPDAQTRRKWVQRILDHDGSHGEDGGIEAWLRLGEAVGLSRDDLLSERHVLPGV  121

Query  125  RFAVDAYVNFARRACWQEAACSSLTELFAPAIHQSRLDTWPTHYPWIDAEGYAYFRGRLS  184
            RFAVDAY+NFARRACWQEAACSSLTELFAP IHQSRLD+WP HYPWI  EGY YFR RLS
Sbjct  122  RFAVDAYLNFARRACWQEAACSSLTELFAPQIHQSRLDSWPQHYPWIKEEGYFYFRSRLS  181

Query  185  QANRDVEHGLELALEYCNTVDRQQRMLNILQFKLDILWTILDGMSMAYVLERAPYHTVTQ  244
            QANRDVEHGL LA  YC++ ++Q RML ILQFKLDILW++LD M+MAY L+R PYHTVT 
Sbjct  182  QANRDVEHGLALAKTYCDSAEKQNRMLEILQFKLDILWSMLDAMTMAYALQRPPYHTVTD  241

Query  245  EAVWHQKGLL  254
            +A WH   L+
Sbjct  242  KAAWHTTRLV  251


>P27505 Pyrroloquinoline-quinone synthase [Klebsiella pneumoniae]
Length=251

 Score = 402 bits (1032),  Expect = 5e-147
 Identities = 185/250 (74%), Positives = 209/250 (84%), Gaps = 0/250 (0%)

Query  5    MTTTLFSPAEFEQALRDKGRYYHIHHPYHIMMNDGHATKQQIQGWVANRFYYQVNIPLKD  64
            + T   SP  FE+ALR KG +YHIHHPYHI M++G AT++QIQGWVANRFYYQ  IPLKD
Sbjct  2    LITDTLSPQAFEEALRAKGAFYHIHHPYHIAMHNGDATRKQIQGWVANRFYYQTTIPLKD  61

Query  65   AAIMANCPDPATRRKWVQRILDHDGQHDDHGGIEAWLRLGEAVGLDRETILSQKMVLPSV  124
            AAIMANCPD  TRRKWVQRILDHDG H + GGIEAWLRLGEAVGL R+ +LS++ VLP V
Sbjct  62   AAIMANCPDAQTRRKWVQRILDHDGSHGEDGGIEAWLRLGEAVGLSRDDLLSERHVLPGV  121

Query  125  RFAVDAYVNFARRACWQEAACSSLTELFAPAIHQSRLDTWPTHYPWIDAEGYAYFRGRLS  184
            RFAVDAY+NFARRACWQEAACSSLTELFAP IHQSRLD+WP HYPWI  EGY YFR RLS
Sbjct  122  RFAVDAYLNFARRACWQEAACSSLTELFAPQIHQSRLDSWPQHYPWIKEEGYFYFRSRLS  181

Query  185  QANRDVEHGLELALEYCNTVDRQQRMLNILQFKLDILWTILDGMSMAYVLERAPYHTVTQ  244
            QANRDVEHGL LA  YC++ ++Q RML ILQFKLDILW++LD M+MAY L+R PYHTVT 
Sbjct  182  QANRDVEHGLALAKAYCDSAEKQNRMLEILQFKLDILWSMLDAMTMAYALQRPPYHTVTD  241

Query  245  EAVWHQKGLL  254
            +A WH   L+
Sbjct  242  KAAWHTTRLV  251


>A4XTR2 Pyrroloquinoline-quinone synthase [Pseudomonas mendocina 
(strain ymp)]
Length=250

 Score = 393 bits (1009),  Expect = 2e-143
 Identities = 184/246 (75%), Positives = 205/246 (83%), Gaps = 0/246 (0%)

Query  5    MTTTLFSPAEFEQALRDKGRYYHIHHPYHIMMNDGHATKQQIQGWVANRFYYQVNIPLKD  64
            M+    +PAEFEQALR KG  YHIHHP+H  M +G AT++QIQGWVANRFYYQVNIPLKD
Sbjct  1    MSQAAMTPAEFEQALRAKGALYHIHHPFHRAMYEGRATREQIQGWVANRFYYQVNIPLKD  60

Query  65   AAIMANCPDPATRRKWVQRILDHDGQHDDHGGIEAWLRLGEAVGLDRETILSQKMVLPSV  124
            AAI+ANCPD  TRR+W+QRILDHDG   + GGIEAWLRL E+VGLDRE +LSQ++VLP V
Sbjct  61   AAILANCPDRETRREWIQRILDHDGAPGEEGGIEAWLRLAESVGLDREQVLSQELVLPGV  120

Query  125  RFAVDAYVNFARRACWQEAACSSLTELFAPAIHQSRLDTWPTHYPWIDAEGYAYFRGRLS  184
            RFAVDAYVNFARRA WQEAA SSLTELFAP IHQSRLD WP HYPWIDA GY YFR RLS
Sbjct  121  RFAVDAYVNFARRASWQEAASSSLTELFAPTIHQSRLDAWPQHYPWIDAAGYDYFRNRLS  180

Query  185  QANRDVEHGLELALEYCNTVDRQQRMLNILQFKLDILWTILDGMSMAYVLERAPYHTVTQ  244
            QA RDVEHGL + LE+  T D Q+ MLNILQFKLD+LW++LD MSMAY LER PYHTVT 
Sbjct  181  QARRDVEHGLRITLEHYRTRDAQEHMLNILQFKLDVLWSMLDAMSMAYELERPPYHTVTA  240

Query  245  EAVWHQ  250
            E VWH+
Sbjct  241  ERVWHK  246


>Q9I2C2 Pyrroloquinoline-quinone synthase [Pseudomonas aeruginosa 
(strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 
/ LMG 12228 / 1C / PRS 101 / PAO1)]
Length=250

 Score = 388 bits (997),  Expect = 1e-141
 Identities = 179/246 (73%), Positives = 208/246 (85%), Gaps = 0/246 (0%)

Query  5    MTTTLFSPAEFEQALRDKGRYYHIHHPYHIMMNDGHATKQQIQGWVANRFYYQVNIPLKD  64
            M+      AEFE+ALRDKGRYYHIHHP+H+ M +G A+++QIQGWVANRFYYQVNIPLKD
Sbjct  1    MSRAAMDRAEFERALRDKGRYYHIHHPFHVAMYEGRASREQIQGWVANRFYYQVNIPLKD  60

Query  65   AAIMANCPDPATRRKWVQRILDHDGQHDDHGGIEAWLRLGEAVGLDRETILSQKMVLPSV  124
            AAI+ANCPD   RR+W+QRILDHDG   + GGIEAWLRL EAVGL+RE +LS++ VLP V
Sbjct  61   AAILANCPDREVRREWIQRILDHDGAPGEAGGIEAWLRLAEAVGLEREQVLSEERVLPGV  120

Query  125  RFAVDAYVNFARRACWQEAACSSLTELFAPAIHQSRLDTWPTHYPWIDAEGYAYFRGRLS  184
            RFAVDAYVNFARRA WQEAA SSLTELFAP IHQSRLD+WP HYPWI+A GY YFR RL+
Sbjct  121  RFAVDAYVNFARRASWQEAASSSLTELFAPQIHQSRLDSWPRHYPWIEAAGYEYFRSRLA  180

Query  185  QANRDVEHGLELALEYCNTVDRQQRMLNILQFKLDILWTILDGMSMAYVLERAPYHTVTQ  244
            QA RDVEHGL + LE+  T + Q+RML+ILQFKLD+LW++LD MSMAY LER PYHTVT+
Sbjct  181  QARRDVEHGLRITLEHYRTREAQERMLDILQFKLDVLWSMLDAMSMAYELERPPYHTVTR  240

Query  245  EAVWHQ  250
            E VWH+
Sbjct  241  ERVWHR  246


>Q02LD4 Pyrroloquinoline-quinone synthase [Pseudomonas aeruginosa 
(strain UCBPP-PA14)]
Length=250

 Score = 388 bits (997),  Expect = 1e-141
 Identities = 179/246 (73%), Positives = 208/246 (85%), Gaps = 0/246 (0%)

Query  5    MTTTLFSPAEFEQALRDKGRYYHIHHPYHIMMNDGHATKQQIQGWVANRFYYQVNIPLKD  64
            M+      AEFE+ALRDKGRYYHIHHP+H+ M +G A+++QIQGWVANRFYYQVNIPLKD
Sbjct  1    MSRAAMDRAEFERALRDKGRYYHIHHPFHVAMYEGRASREQIQGWVANRFYYQVNIPLKD  60

Query  65   AAIMANCPDPATRRKWVQRILDHDGQHDDHGGIEAWLRLGEAVGLDRETILSQKMVLPSV  124
            AAI+ANCPD   RR+W+QRILDHDG   + GGIEAWLRL EAVGL+RE +LS++ VLP V
Sbjct  61   AAILANCPDREVRREWIQRILDHDGAPGEAGGIEAWLRLAEAVGLEREQVLSEERVLPGV  120

Query  125  RFAVDAYVNFARRACWQEAACSSLTELFAPAIHQSRLDTWPTHYPWIDAEGYAYFRGRLS  184
            RFAVDAYVNFARRA WQEAA SSLTELFAP IHQSRLD+WP HYPWI+A GY YFR RL+
Sbjct  121  RFAVDAYVNFARRASWQEAASSSLTELFAPQIHQSRLDSWPRHYPWIEAAGYEYFRSRLA  180

Query  185  QANRDVEHGLELALEYCNTVDRQQRMLNILQFKLDILWTILDGMSMAYVLERAPYHTVTQ  244
            QA RDVEHGL + LE+  T + Q+RML+ILQFKLD+LW++LD MSMAY LER PYHTVT+
Sbjct  181  QARRDVEHGLRITLEHYRTREAQERMLDILQFKLDVLWSMLDAMSMAYELERPPYHTVTR  240

Query  245  EAVWHQ  250
            E VWH+
Sbjct  241  ERVWHR  246


>B7VAB8 Pyrroloquinoline-quinone synthase [Pseudomonas aeruginosa 
(strain LESB58)]
Length=250

 Score = 388 bits (997),  Expect = 1e-141
 Identities = 179/246 (73%), Positives = 208/246 (85%), Gaps = 0/246 (0%)

Query  5    MTTTLFSPAEFEQALRDKGRYYHIHHPYHIMMNDGHATKQQIQGWVANRFYYQVNIPLKD  64
            M+      AEFE+ALRDKGRYYHIHHP+H+ M +G A+++QIQGWVANRFYYQVNIPLKD
Sbjct  1    MSRAAMDRAEFERALRDKGRYYHIHHPFHVAMYEGRASREQIQGWVANRFYYQVNIPLKD  60

Query  65   AAIMANCPDPATRRKWVQRILDHDGQHDDHGGIEAWLRLGEAVGLDRETILSQKMVLPSV  124
            AAI+ANCPD   RR+W+QRILDHDG   + GGIEAWLRL EAVGL+RE +LS++ VLP V
Sbjct  61   AAILANCPDREVRREWIQRILDHDGAPGEAGGIEAWLRLAEAVGLEREQVLSEERVLPGV  120

Query  125  RFAVDAYVNFARRACWQEAACSSLTELFAPAIHQSRLDTWPTHYPWIDAEGYAYFRGRLS  184
            RFAVDAYVNFARRA WQEAA SSLTELFAP IHQSRLD+WP HYPWI+A GY YFR RL+
Sbjct  121  RFAVDAYVNFARRASWQEAASSSLTELFAPQIHQSRLDSWPRHYPWIEAAGYEYFRSRLA  180

Query  185  QANRDVEHGLELALEYCNTVDRQQRMLNILQFKLDILWTILDGMSMAYVLERAPYHTVTQ  244
            QA RDVEHGL + LE+  T + Q+RML+ILQFKLD+LW++LD MSMAY LER PYHTVT+
Sbjct  181  QARRDVEHGLRITLEHYRTREAQERMLDILQFKLDVLWSMLDAMSMAYELERPPYHTVTR  240

Query  245  EAVWHQ  250
            E VWH+
Sbjct  241  ERVWHR  246


>C1DEW7 Pyrroloquinoline-quinone synthase [Azotobacter vinelandii 
(strain DJ / ATCC BAA-1303)]
Length=250

 Score = 387 bits (993),  Expect = 4e-141
 Identities = 183/250 (73%), Positives = 207/250 (83%), Gaps = 0/250 (0%)

Query  5    MTTTLFSPAEFEQALRDKGRYYHIHHPYHIMMNDGHATKQQIQGWVANRFYYQVNIPLKD  64
            MT T  SPAEFE+ALR KG YYHIHHP+ + M +G +T++QI+GWVANRFYYQVNIPLKD
Sbjct  1    MTQTAMSPAEFERALRAKGAYYHIHHPFQVAMYEGRSTREQIRGWVANRFYYQVNIPLKD  60

Query  65   AAIMANCPDPATRRKWVQRILDHDGQHDDHGGIEAWLRLGEAVGLDRETILSQKMVLPSV  124
            AAI+ANCPD   RR+WVQRILDHDG   + GGIEAWLRLGEAVGLDRE +LSQ++VLP V
Sbjct  61   AAILANCPDREVRREWVQRILDHDGGPGEEGGIEAWLRLGEAVGLDREQLLSQELVLPGV  120

Query  125  RFAVDAYVNFARRACWQEAACSSLTELFAPAIHQSRLDTWPTHYPWIDAEGYAYFRGRLS  184
            RFAVDAYVNFARRA WQEAA SSLTELFAP IHQSRLDTWP HYPWI+A GY YFR RL 
Sbjct  121  RFAVDAYVNFARRASWQEAAGSSLTELFAPTIHQSRLDTWPRHYPWIEAGGYDYFRRRLK  180

Query  185  QANRDVEHGLELALEYCNTVDRQQRMLNILQFKLDILWTILDGMSMAYVLERAPYHTVTQ  244
            +A RDVEHGL + L +  T + Q RML ILQFKLDILW++LD MSMAY L+R PYHTVT 
Sbjct  181  EARRDVEHGLRITLAHFATREAQARMLEILQFKLDILWSMLDAMSMAYELDRPPYHTVTH  240

Query  245  EAVWHQKGLL  254
            E VWH+  +L
Sbjct  241  ERVWHRGTIL  250


>B1JDZ8 Pyrroloquinoline-quinone synthase [Pseudomonas putida 
(strain W619)]
Length=251

 Score = 382 bits (981),  Expect = 3e-139
 Identities = 177/240 (74%), Positives = 201/240 (84%), Gaps = 0/240 (0%)

Query  11   SPAEFEQALRDKGRYYHIHHPYHIMMNDGHATKQQIQGWVANRFYYQVNIPLKDAAIMAN  70
            SPAEFEQALR KG YYHIHHPYH+ M +G AT++QIQGWVANRFYYQVNIP+KDAAI+AN
Sbjct  8    SPAEFEQALRAKGAYYHIHHPYHVAMYEGRATREQIQGWVANRFYYQVNIPMKDAAILAN  67

Query  71   CPDPATRRKWVQRILDHDGQHDDHGGIEAWLRLGEAVGLDRETILSQKMVLPSVRFAVDA  130
            CPD   RR+W+QR+LDHDG   + GGIEAWLRLG+AVGLD + + SQ++VLP VRFAVDA
Sbjct  68   CPDREVRREWIQRLLDHDGAPGEDGGIEAWLRLGQAVGLDPDQLRSQELVLPGVRFAVDA  127

Query  131  YVNFARRACWQEAACSSLTELFAPAIHQSRLDTWPTHYPWIDAEGYAYFRGRLSQANRDV  190
            YVNFARRA WQEAA SSLTELFAP IHQSRLD+WP HYPWID  GY YFR RL QA RDV
Sbjct  128  YVNFARRASWQEAASSSLTELFAPQIHQSRLDSWPQHYPWIDPAGYEYFRTRLGQARRDV  187

Query  191  EHGLELALEYCNTVDRQQRMLNILQFKLDILWTILDGMSMAYVLERAPYHTVTQEAVWHQ  250
            EHGL + L++  T   Q+RML ILQFKLDILW++LD MSMAY L R PYHTVTQ+ VWH+
Sbjct  188  EHGLTITLQHYTTRAAQERMLEILQFKLDILWSMLDAMSMAYELHRPPYHTVTQQRVWHK  247


>Q88QV6 Pyrroloquinoline-quinone synthase [Pseudomonas putida 
(strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440)]
Length=251

 Score = 380 bits (977),  Expect = 1e-138
 Identities = 177/240 (74%), Positives = 200/240 (83%), Gaps = 0/240 (0%)

Query  11   SPAEFEQALRDKGRYYHIHHPYHIMMNDGHATKQQIQGWVANRFYYQVNIPLKDAAIMAN  70
            SPAEFEQALR KG YYHIHHPYH+ M  G AT++QIQGWVANRFYYQVNIP+KDAAI+AN
Sbjct  8    SPAEFEQALRAKGAYYHIHHPYHVAMYQGRATREQIQGWVANRFYYQVNIPMKDAAILAN  67

Query  71   CPDPATRRKWVQRILDHDGQHDDHGGIEAWLRLGEAVGLDRETILSQKMVLPSVRFAVDA  130
            CPD   RR+W+QR+LDHDG   + GGIEAWLRLG+AVGLD + + SQ++VLP VRFAVDA
Sbjct  68   CPDREVRREWIQRLLDHDGAPGEDGGIEAWLRLGQAVGLDPDQLRSQELVLPGVRFAVDA  127

Query  131  YVNFARRACWQEAACSSLTELFAPAIHQSRLDTWPTHYPWIDAEGYAYFRGRLSQANRDV  190
            YVNFARRA WQEAA SSLTELFAP IHQSRLD+WP HYPWID  GY YFR RL QA RDV
Sbjct  128  YVNFARRASWQEAASSSLTELFAPQIHQSRLDSWPQHYPWIDPAGYEYFRTRLGQARRDV  187

Query  191  EHGLELALEYCNTVDRQQRMLNILQFKLDILWTILDGMSMAYVLERAPYHTVTQEAVWHQ  250
            EHGL + L++  T   Q+RML ILQFKLDILW++LD MSMAY L R PYH+VTQE VWH+
Sbjct  188  EHGLAITLQHYTTRAGQERMLEILQFKLDILWSMLDAMSMAYELNRPPYHSVTQERVWHK  247


>P07780 Pyrroloquinoline-quinone synthase [Acinetobacter calcoaceticus]
Length=252

 Score = 363 bits (931),  Expect = 1e-131
 Identities = 166/248 (67%), Positives = 204/248 (82%), Gaps = 1/248 (0%)

Query  6    TTTLFSPAEFEQALRDKGRYYHIHHPYHIMMNDGHATKQQIQGWVANRFYYQVNIPLKDA  65
            T    +  +F+QA+ DKG+YYHI+HP+H+MM +G AT+QQIQ WVANR+YYQ+NIPLKDA
Sbjct  4    TPEALTTEQFKQAIIDKGQYYHIYHPFHVMMYEGKATQQQIQAWVANRYYYQINIPLKDA  63

Query  66   AIMANCPDPATRRKWVQRILDHDGQHDDHGGIEAWLRLGEAVGLDRETILSQKMVLPSVR  125
            AIMANCPD   R++W+QR++D DG++ D GG EAWLRL EAVGL RE ++S+++VLP VR
Sbjct  64   AIMANCPDQRVRQEWIQRMIDQDGEYPDGGGREAWLRLAEAVGLSREQVISEELVLPGVR  123

Query  126  FAVDAYVNFARRACWQEAACSSLTELFAPAIHQSRLDTWPTHYPWIDAEGYAYFRGRLSQ  185
            FAVDAYVNF RRA W+EAA SSLTELFAP IHQSRLD+WP HYPWID +GY YFR RLSQ
Sbjct  124  FAVDAYVNFRRRASWREAASSSLTELFAPQIHQSRLDSWPQHYPWIDDKGYEYFRSRLSQ  183

Query  186  ANRDVEHGLELALEYCNTVDRQQRMLNILQFKLDILWTILDGMSMAYVLERAPYHTVTQE  245
            A RDVEHGL + L+   T ++Q+RML ILQFKLDILW+ILD +++AYV   APYH+VT +
Sbjct  184  ARRDVEHGLTITLDSFTTFEQQERMLEILQFKLDILWSILDALTLAYVHNEAPYHSVTSK  243

Query  246  AVWHQKGL  253
             VWH KGL
Sbjct  244  RVWH-KGL  250


 Score = 16.5 bits (31),  Expect = 8.6
 Identities = 6/19 (32%), Positives = 10/19 (53%), Gaps = 0/19 (0%)

Query  68  MANCPDPATRRKWVQRILD  86
           M   P+  T  ++ Q I+D
Sbjct  1   MTQTPEALTTEQFKQAIID  19


>Q49150 Pyrroloquinoline-quinone synthase / PqqA binding protein 
[Methylorubrum extorquens (strain ATCC 14718 / DSM 1338 / 
JCM 2805 / NCIMB 9133 / AM1)]
Length=372

 Score = 207 bits (527),  Expect = 8e-69
 Identities = 104/226 (46%), Positives = 141/226 (62%), Gaps = 1/226 (0%)

Query  9    LFSPAEFEQALRDKG-RYYHIHHPYHIMMNDGHATKQQIQGWVANRFYYQVNIPLKDAAI  67
            L S  E E ALRD G R YH  HP+H +++DG  +K Q++ W  NR+YYQ  IP+KDAA+
Sbjct  16   LLSHEELEAALRDIGARRYHNLHPFHRLLHDGKLSKDQVRAWALNRYYYQAMIPVKDAAL  75

Query  68   MANCPDPATRRKWVQRILDHDGQHDDHGGIEAWLRLGEAVGLDRETILSQKMVLPSVRFA  127
            +A  PD   RR W QRI+DHDG H+  GGIE WL+L E VG  R+ +LS K +L + RF+
Sbjct  76   LARLPDAQLRRIWRQRIVDHDGDHEGDGGIERWLKLAEGVGFTRDYVLSTKGILSATRFS  135

Query  128  VDAYVNFARRACWQEAACSSLTELFAPAIHQSRLDTWPTHYPWIDAEGYAYFRGRLSQAN  187
            VDAYV+F       EA  SSLTE+F+P I   R+     +Y +I  +  AYF  RL+QA 
Sbjct  136  VDAYVHFVSERSLLEAIASSLTEMFSPTIISERVAGMLKNYDFITKDTLAYFDKRLTQAP  195

Query  188  RDVEHGLELALEYCNTVDRQQRMLNILQFKLDILWTILDGMSMAYV  233
            RD +  L+    +  T + Q+  ++ L FK ++LWT LD +  AYV
Sbjct  196  RDADFALDYVKRHATTPEMQRAAIDALTFKCNVLWTQLDALYFAYV  241


>Q9L3B2 Pyrroloquinoline-quinone synthase [Gluconobacter oxydans 
(strain 621H)]
Length=239

 Score = 196 bits (499),  Expect = 3e-66
 Identities = 100/232 (43%), Positives = 134/232 (58%), Gaps = 1/232 (0%)

Query  8    TLFSPAEFEQALRDKG-RYYHIHHPYHIMMNDGHATKQQIQGWVANRFYYQVNIPLKDAA  66
            TL +P + E  LR  G   YH  HP+H  ++DG   K Q+Q W  NR+YYQ  IP KDA 
Sbjct  2    TLLTPDQLEAQLRQIGAERYHNRHPFHRKLHDGKLDKAQVQAWALNRYYYQARIPAKDAT  61

Query  67   IMANCPDPATRRKWVQRILDHDGQHDDHGGIEAWLRLGEAVGLDRETILSQKMVLPSVRF  126
            ++A  P    RR+W +RI DHDG     GG+  WL L + +GLDR+ + S   +LP+ RF
Sbjct  62   LLARLPTAELRREWRRRIEDHDGTEPGTGGVARWLMLTDGLGLDRDYVESLDGLLPATRF  121

Query  127  AVDAYVNFARRACWQEAACSSLTELFAPAIHQSRLDTWPTHYPWIDAEGYAYFRGRLSQA  186
            +VDAYVNF R      A  SSLTELF+P I   R+     HY ++  +  AYF  RL+QA
Sbjct  122  SVDAYVNFVRDQSILAAIASSLTELFSPTIISERVSGMLRHYDFVSEKTLAYFTPRLTQA  181

Query  187  NRDVEHGLELALEYCNTVDRQQRMLNILQFKLDILWTILDGMSMAYVLERAP  238
             RD +  L    E   T ++Q+ +L  L+FK  +LWT+LD +  AYV    P
Sbjct  182  PRDSDFALAYVREKARTPEQQKEVLGALEFKCSVLWTMLDALDYAYVEGHIP  233


 Score = 16.5 bits (31),  Expect = 8.5
 Identities = 7/20 (35%), Positives = 10/20 (50%), Gaps = 0/20 (0%)

Query  7    TTLFSPAEFEQALRDKGRYY  26
            T LFSP    + +    R+Y
Sbjct  144  TELFSPTIISERVSGMLRHY  163


>Q50438 Pyrroloquinoline-quinone synthase [Methylobacillus flagellatus]
Length=52

 Score = 62.0 bits (149),  Expect = 2e-16
 Identities = 25/38 (66%), Positives = 32/38 (84%), Gaps = 0/38 (0%)

Query  14  EFEQALRDKGRYYHIHHPYHIMMNDGHATKQQIQGWVA  51
           EFEQ LRDKGR YHI+HP+H+MM +G  T++Q+Q WVA
Sbjct  15  EFEQKLRDKGRGYHIYHPFHVMMYEGKLTREQLQCWVA  52



Lambda      K        H        a         alpha
   0.326    0.138    0.452    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 733998


  Database: 7ea756d3c27fd50c4b4950552477784a.SwissProt.fasta
    Posted date:  May 8, 2024  2:43 PM
  Number of letters in database: 4,177
  Number of sequences in database:  17



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40