BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 6555a887ec890a53aa5dae7c2c1823d8.SwissProt.fasta
13 sequences; 5,843 total letters
Query= ACIAD2510
Length=473
Score E
Sequences producing significant alignments: (Bits) Value
P42314 Uncharacterized transporter YxjC [Bacillus subtilis (strai... 642 0.0
P71364 Uncharacterized permease HI_1015 [Haemophilus influenzae (... 58.9 1e-12
P0AC95 High-affinity gluconate transporter [Escherichia coli O157... 51.6 3e-10
P0AC94 High-affinity gluconate transporter [Escherichia coli (str... 51.6 3e-10
Q57493 Uncharacterized transporter HI_0092 [Haemophilus influenza... 47.4 6e-09
P39344 Gnt-II system L-idonate transporter [Escherichia coli (str... 47.4 6e-09
P46832 Gluconate permease [Bacillus licheniformis] 45.4 2e-08
P12012 Gluconate permease [Bacillus subtilis (strain 168)] 45.1 3e-08
Q9ZIJ1 Gluconate permease [Pseudomonas aeruginosa (strain ATCC 15... 38.5 4e-06
O31862 Uncharacterized permease YojA [Bacillus subtilis (strain 1... 38.1 5e-06
A0A0H2VAP9 D-serine transporter DsdX [Escherichia coli O6:H1 (str... 38.1 5e-06
P08555 D-serine transporter DsdX [Escherichia coli (strain K12)] 37.7 6e-06
Q9Z670 Gluconate permease [Zymomonas mobilis subsp. mobilis (stra... 28.5 0.005
>P42314 Uncharacterized transporter YxjC [Bacillus subtilis (strain
168)]
Length=472
Score = 642 bits (1655), Expect = 0.0
Identities = 323/471 (69%), Positives = 388/471 (82%), Gaps = 1/471 (0%)
Query 3 ELFVILLSLSLLMYTAYRGFSVILMAPICALLAVLLINPANVLPFYSGVFMPKMVNFIKD 62
EL +ILL+L LLM+TAYRGFSVIL APICAL AVLL +P++VLPF+S +FM KM FIK
Sbjct 2 ELIIILLALGLLMFTAYRGFSVILFAPICALFAVLLTDPSHVLPFFSSIFMEKMAGFIKL 61
Query 63 YFLVFLLGAIFGKVVEMSGIAESIAKTIVNLIGAKKAILTVVLLGAILTYSGVSLFVAVF 122
YF VFLLGAIFGKVVEM+G+A SIAKTIV L+GAK+AIL +VL+GA+LTYSGVSLFV VF
Sbjct 62 YFPVFLLGAIFGKVVEMAGLAASIAKTIVRLVGAKRAILAIVLMGAVLTYSGVSLFVVVF 121
Query 123 AIYPFANQLFQQANIPKRLIPGTIALGAFTFTMDALPGTPQIQNVIPTTFFGTNIYAAPF 182
A+YPFA +FQ+ANIPKRLIPGTIALGAFTFTMDALPGTPQIQNVIPT+FF T+IYAAP+
Sbjct 122 AVYPFAKNMFQEANIPKRLIPGTIALGAFTFTMDALPGTPQIQNVIPTSFFKTDIYAAPW 181
Query 183 LGIIGAIFVLCMGLSYLEWRRRVAARAGEGYAGFDQAAFSDVQNTIVDANENRTFLRQCL 242
LG++GA+ VL G+ YLE RR+ A +GEGY GFD ++ A +++ +R L
Sbjct 182 LGLMGAVIVLAAGMLYLESRRKKAQASGEGYGGFDSQNAPAPESIESAAEPDKSPIRHAL 241
Query 243 AFVPLILVAVMNKYLSTAIKTWYPNGFDFNAIGLANY-TVDVAKTGAIWAVGLALIVGII 301
AFVPLILV +NKY + + WYPNGFDF++IGL + +D++ AIW+V +AL++GII
Sbjct 242 AFVPLILVGAVNKYFTIYLPKWYPNGFDFSSIGLKEFGRLDISSAAAIWSVEIALVIGII 301
Query 302 TAILFDYQRVMSQFKEGVNASIGGSLLAVMNTASEYGFGAIIAALPGFALISHALSHTFT 361
T ILFD++ V +Q KEG+N IGG+LLA MNT +EYGFG IIAALPGF +S +SHTFT
Sbjct 302 TTILFDWRSVFAQLKEGLNEGIGGALLASMNTGAEYGFGGIIAALPGFHKLSSGISHTFT 361
Query 362 NPLVNGAVTTTTLAGITGSASGGMSIALSAMAEQYNAAILAAGIPPEVMHRVVAMASGGM 421
+PLVNGAVTTT LAGITGSASGGM IALSAM+EQY AI A IPPEVMHRV++MASGGM
Sbjct 362 DPLVNGAVTTTALAGITGSASGGMGIALSAMSEQYLQAIQAYNIPPEVMHRVISMASGGM 421
Query 422 DTLPHNGAVITLLAVTGLTHKQSYKDIFAVTIIKTMAVFVVIAAFTWFGIV 472
DTLPHNGAVITLLAVTGLTH+QSY+DIFA+T+IKT AVF VIA ++ G+V
Sbjct 422 DTLPHNGAVITLLAVTGLTHRQSYRDIFAITLIKTAAVFAVIAIYSLTGLV 472
>P71364 Uncharacterized permease HI_1015 [Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd)]
Length=488
Score = 58.9 bits (141), Expect = 1e-12
Identities = 78/383 (20%), Positives = 163/383 (43%), Gaps = 38/383 (10%)
Query 24 VILMAPICALLAVLLINPANVLPFYSGVFMPKMVNFIKDYF--------LVFLLGAIFGK 75
++L + A +A+L+ A++ G+ + +N I F +V LG + G
Sbjct 21 LVLRTRVHAFIAMLIA--ASIAGLVGGMSADETLNSITKGFGGTLGSIGIVIGLGVMMGS 78
Query 76 VVEMSGIAESIAKTIVNLIGAKKAILTVVLLGAILTYSGVSLFV--AVFAIYPFANQLFQ 133
V+E+SG AE +A + + ++G KK + + G +++ + +FV A +YP A L +
Sbjct 79 VLEVSGAAEKMAYSFIKMLGQKKEEWALAITGYVVS---IPIFVDSAFVILYPVAKALAK 135
Query 134 QANIPKRLIPGTIALGAFTFTMDALPGTPQIQNVIPTTFFGTNIYAAPFLGIIGAIFVLC 193
L G G T +P TP V FG +I A G+ A +
Sbjct 136 NGK-RSLLTLGVALAGGLAVTHHTVPPTPGPLGV--AGLFGVDIGAMLLTGMCMAFLPVV 192
Query 194 MGLSYLEWRRRVAARAGEGYAGFDQAAFSDVQ-----NTIVDANENRTFLRQCLAFVPLI 248
+ Y +W + Y F+Q F++ + ++ +++ E + L+ +P++
Sbjct 193 GIVLYAKW-------LDKKYPNFNQEVFTEEELKQKYDSYIESREKKELPSLGLSLLPIV 245
Query 249 LVAVMNKYLSTAIKTWYPNGFDFNAIGLANYTVDVAKTGAIWAVGLALIVGIITAI-LFD 307
L V+ ++ + + + + A+ Y + + + L++++ + T + D
Sbjct 246 LPIVL-IFIKAVVHLFVKDVPE--ALTSIPYQIVSFLGHPVIVLALSVLISVYTLLPKAD 302
Query 308 YQRVMSQFKEGVNASIGGSLLAVMNTASEYGFGAIIAALPGFALISHALSHTFTNPLVNG 367
+EGV + G +L V T + GA++ ++ +++ +P++
Sbjct 303 KNTTALHLEEGVKTA--GIILLV--TGAGGALGAVLRDSGAGKQLAEQIANLPISPILIP 358
Query 368 AVTTTTLAGITGSASGGMSIALS 390
+ +T + I GS + M A S
Sbjct 359 FIVSTLVRFIQGSGTVAMITAAS 381
Score = 23.5 bits (49), Expect = 0.18
Identities = 33/171 (19%), Positives = 69/171 (40%), Gaps = 9/171 (5%)
Query 241 CLAFVPLILVAVMNKYLSTAIKTWYPNGFDFNAIGLA-NYTVDVAKTGAIWAVGLALIVG 299
C+AF+P++ + + K+L + F + + ++ + + ++GL+L+
Sbjct 185 CMAFLPVVGIVLYAKWLDKKYPNFNQEVFTEEELKQKYDSYIESREKKELPSLGLSLLPI 244
Query 300 IITAILFDYQRVMSQFKEGVNASIGGSLLAVMNTASEYGFGAIIAAL----PGFALISHA 355
++ +L + V+ F + V ++ ++ S G I+ AL + L+ A
Sbjct 245 VLPIVLIFIKAVVHLFVKDVPEALTSIPYQIV---SFLGHPVIVLALSVLISVYTLLPKA 301
Query 356 LSHTFTNPLVNGAVTTTTLAGITGSASGGMSIALSAMAEQYNAAILAAGIP 406
+T L G T + +TG A G + L A A +P
Sbjct 302 DKNTTALHLEEGVKTAGIILLVTG-AGGALGAVLRDSGAGKQLAEQIANLP 351
>P0AC95 High-affinity gluconate transporter [Escherichia coli
O157:H7]
Length=447
Score = 51.6 bits (122), Expect = 3e-10
Identities = 100/390 (26%), Positives = 160/390 (41%), Gaps = 68/390 (17%)
Query 58 NFIKDYFLVFLLGAIFGKVVEMSGIAESIAKTIVNLIGAKKAILTVVLLGAILTYSGVSL 117
N + + ++ + GA+ GK++ SG A IA T++ +G + L+V+++G I G+++
Sbjct 59 NTLGELAIIVVFGAVIGKLMVDSGAAHQIAHTLLARLGLRYVQLSVIIIGLIF---GLAM 115
Query 118 F--VAVFAIYPFANQLFQQANIP--KRLIPGTIALGAFTFTMDALPGTPQIQNVIPTTFF 173
F VA + P + +A IP K IP A+ A T P PQ V +
Sbjct 116 FYEVAFIMLAPLVIVIAAEAKIPFLKLAIP---AVAAATTAHSLFP--PQPGPVALVNAY 170
Query 174 GTNIYAAPFLGIIGAI-FVLCMGLSYLEWRRRVAARAGEGYAGFDQAAFSDVQNTIVDAN 232
G ++ G++ I V+C GL ++ + R + DQ VD N
Sbjct 171 GADMGMVYIYGVLVTIPSVICAGLILPKFLGNL-ERPTPSFLKADQP---------VDMN 220
Query 233 ENRTFLRQCLAFVPLILVAVMNKYLSTAIKTWY-----PNGFDFNAIGLANYTVDVAKTG 287
+F L VPLI +M +ST I + P N IG + + +A
Sbjct 221 NLPSFGVSIL--VPLIPAIIM---ISTTIANIWLVKDTPAWEVVNFIGSSPIAMFIAMVV 275
Query 288 AIWAVGLALIVGIITAILFDYQRVMSQFKEGVNA-----SIGGSLLAVMNTASEYGFGAI 342
A G TA D Q VM+ F+ V + I G+ + T + G G
Sbjct 276 AFVLFG--------TARGHDMQWVMNAFESAVKSIAMVILIIGAGGVLKQTIIDTGIGDT 327
Query 343 IAALPGFALISHALSHTFTNPLVNGAVTTTTLAGITGSASGGMSIALSAMAEQYNAAIL- 401
I L +SH +P + + T + TG G+ A++A A +AAIL
Sbjct 328 IGML---------MSHGNISPYIMAWLITVLIRLATGQ---GVVSAMTA-AGIISAAILD 374
Query 402 -----AAGIPPEVMHRVVAMASGGMDTLPH 426
G+ P ++ V + G +TL H
Sbjct 375 PATGQLVGVNPALL---VLATAAGSNTLTH 401
>P0AC94 High-affinity gluconate transporter [Escherichia coli
(strain K12)]
Length=447
Score = 51.6 bits (122), Expect = 3e-10
Identities = 100/390 (26%), Positives = 160/390 (41%), Gaps = 68/390 (17%)
Query 58 NFIKDYFLVFLLGAIFGKVVEMSGIAESIAKTIVNLIGAKKAILTVVLLGAILTYSGVSL 117
N + + ++ + GA+ GK++ SG A IA T++ +G + L+V+++G I G+++
Sbjct 59 NTLGELAIIVVFGAVIGKLMVDSGAAHQIAHTLLARLGLRYVQLSVIIIGLIF---GLAM 115
Query 118 F--VAVFAIYPFANQLFQQANIP--KRLIPGTIALGAFTFTMDALPGTPQIQNVIPTTFF 173
F VA + P + +A IP K IP A+ A T P PQ V +
Sbjct 116 FYEVAFIMLAPLVIVIAAEAKIPFLKLAIP---AVAAATTAHSLFP--PQPGPVALVNAY 170
Query 174 GTNIYAAPFLGIIGAI-FVLCMGLSYLEWRRRVAARAGEGYAGFDQAAFSDVQNTIVDAN 232
G ++ G++ I V+C GL ++ + R + DQ VD N
Sbjct 171 GADMGMVYIYGVLVTIPSVICAGLILPKFLGNL-ERPTPSFLKADQP---------VDMN 220
Query 233 ENRTFLRQCLAFVPLILVAVMNKYLSTAIKTWY-----PNGFDFNAIGLANYTVDVAKTG 287
+F L VPLI +M +ST I + P N IG + + +A
Sbjct 221 NLPSFGVSIL--VPLIPAIIM---ISTTIANIWLVKDTPAWEVVNFIGSSPIAMFIAMVV 275
Query 288 AIWAVGLALIVGIITAILFDYQRVMSQFKEGVNA-----SIGGSLLAVMNTASEYGFGAI 342
A G TA D Q VM+ F+ V + I G+ + T + G G
Sbjct 276 AFVLFG--------TARGHDMQWVMNAFESAVKSIAMVILIIGAGGVLKQTIIDTGIGDT 327
Query 343 IAALPGFALISHALSHTFTNPLVNGAVTTTTLAGITGSASGGMSIALSAMAEQYNAAIL- 401
I L +SH +P + + T + TG G+ A++A A +AAIL
Sbjct 328 IGML---------MSHGNISPYIMAWLITVLIRLATGQ---GVVSAMTA-AGIISAAILD 374
Query 402 -----AAGIPPEVMHRVVAMASGGMDTLPH 426
G+ P ++ V + G +TL H
Sbjct 375 PATGQLVGVNPALL---VLATAAGSNTLTH 401
>Q57493 Uncharacterized transporter HI_0092 [Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd)]
Length=419
Score = 47.4 bits (111), Expect = 6e-09
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query 66 VFLLGAIFGKVVEMSGIAESIAKTIVNLIGAKKAILTVVLLGAILTYSGVSLFVAVFAIY 125
+ G + G ++E SG A SI +TI N +G +A+L + L ILT GV + VAV +
Sbjct 66 ILAAGVLAGVLIE-SGAANSITETITNKLGETRALLALALATMILTAVGVFVDVAVITVS 124
Query 126 PFANQLFQQANIPKRLI 142
P A L +++++ K I
Sbjct 125 PIALALSRRSDLSKAAI 141
Score = 18.9 bits (37), Expect = 4.7
Identities = 38/140 (27%), Positives = 59/140 (42%), Gaps = 28/140 (20%)
Query 294 LALIVGIITAILFDYQRVMSQFKEGVNASIGGSL--LAVMNTASEYGFGA---------I 342
+ +V +I AI ++V + V A +GG + + T S GA I
Sbjct 7 IGALVALIVAIFLILKKVSPAYGMLVGALVGGLIGGADLSQTVSLMIGGAQGITTAVMRI 66
Query 343 IAA--LPGFALISHA---LSHTFTNPL-VNGAVTTTTLAGITGSASG-----------GM 385
+AA L G + S A ++ T TN L A+ LA + +A G +
Sbjct 67 LAAGVLAGVLIESGAANSITETITNKLGETRALLALALATMILTAVGVFVDVAVITVSPI 126
Query 386 SIALSAMAEQYNAAILAAGI 405
++ALS ++ AAIL A I
Sbjct 127 ALALSRRSDLSKAAILLAMI 146
>P39344 Gnt-II system L-idonate transporter [Escherichia coli
(strain K12)]
Length=439
Score = 47.4 bits (111), Expect = 6e-09
Identities = 92/420 (22%), Positives = 166/420 (40%), Gaps = 56/420 (13%)
Query 24 VILMAPICALLAVLLIN-----------PANVLPFYSGVFMPKMVNFIKDYF-------- 64
+I++A ALL +L+I A V+ F G+ +++ I++
Sbjct 3 LIIIAAGVALLLILMIGFKVNGFIALVLVAAVVGFAEGMDAQAVLHSIQNGIGSTLGGLA 62
Query 65 LVFLLGAIFGKVVEMSGIAESIAKTIVNLIGAKKAILTVVLLGAILTYSGVSLF--VAVF 122
++ GA+ GK++ +G A+ IA T++ G K+ +V+ G ++ G+++F V
Sbjct 63 MILGFGAMLGKLISDTGAAQRIATTLIATFGKKRVQWALVITGLVV---GLAMFFEVGFV 119
Query 123 AIYPFANQLFQQANIPKRLIPGTIALGAFTFTMDALPGTPQIQNVIPTTFFGTNIYAAPF 182
+ P + + +P L G + A + T LP P + T F N+
Sbjct 120 LLLPLVFTIVASSGLP-LLYVGVPMVAALSVTHCFLPPHPGPTAI--ATIFEANLGTTLL 176
Query 183 LGIIGAI-FVLCMGLSYLEWRRRVAARAGEGYAGFDQAAFSDVQNTIVDANENRTFLRQC 241
G I I V+ G + + R EG F+ FS+ + + + N F
Sbjct 177 YGFIITIPTVIVAGPLFSKLLTRFEKAPPEGL--FNPHLFSEEE---MPSFWNSIF---- 227
Query 242 LAFVPLILVAVMNKYLSTAIKTWYPNGFDFNAIGLANYTVDVAKTGAIWAVGLALIVGII 301
A +P+IL+A+ T KT F F +G + +A AI+ +G
Sbjct 228 AAVIPVILMAIAAVCEITLPKTNTVRLF-FEFVGNPAVALFIAIVIAIFTLGRR------ 280
Query 302 TAILFDYQRVMSQFKEGVNASIGGSLLAVMNTASEYGFGAIIAALPGFALISHALSHTFT 361
R + Q + + SIG + V A F ++ + + H +SH T
Sbjct 281 ------NGRTIEQIMDIIGDSIGAIAMIVFIIAGGGAFKQVLVD----SGVGHYISHLMT 330
Query 362 NPLVNGAVTTTTLAGITGSASGGMSIALSAMAEQYNAAILAAGIPPEVMHRVVAMASGGM 421
++ + T+A + A G ++A A I P +M V+A +G +
Sbjct 331 GTTLSPLLMCWTVAALLRIALGSATVAAITTAGVVLPIINVTHADPALM--VLATGAGSV 388
>P46832 Gluconate permease [Bacillus licheniformis]
Length=448
Score = 45.4 bits (106), Expect = 2e-08
Identities = 48/152 (32%), Positives = 72/152 (47%), Gaps = 13/152 (9%)
Query 65 LVFLLGAIFGKVVEMSGIAESIAKTIVNLIGAKKAILTVVLLGAILTYSGVSLF--VAVF 122
L+F LGA+ G+++ SG A+ IA T+VN G + VV+ I+ GV+LF VA+
Sbjct 63 LIFGLGAMLGRLIADSGGAQRIAMTLVNKFGEENIQWAVVIASFII---GVALFFEVALV 119
Query 123 AIYP--FANQLFQQANIPKRLIPGTIALGAFTFTMDALPGTPQIQNVIPTTFFGTNIYAA 180
+ P FA + +I IP T AL + PG I + G NI
Sbjct 120 LLIPIVFAISKELEISISYLGIPMTAALSVTHGFLPPHPGPTAIAGEL-----GANIGEV 174
Query 181 PFLGIIGAI-FVLCMGLSYLEWRRRVAARAGE 211
GII AI VL G + + +++ ++ E
Sbjct 175 LLYGIIVAIPTVLLAGPLFTKLAKKIVPQSFE 206
Score = 23.9 bits (50), Expect = 0.13
Identities = 12/47 (26%), Positives = 22/47 (47%), Gaps = 0/47 (0%)
Query 65 LVFLLGAIFGKVVEMSGIAESIAKTIVNLIGAKKAILTVVLLGAILT 111
++ + + + E G+A++ V LIG + + LL AI T
Sbjct 240 IIMSISTVITLIQETMGLADNSLLAAVRLIGNASTSMVISLLVAIYT 286
Score = 18.1 bits (35), Expect = 8.3
Identities = 13/42 (31%), Positives = 22/42 (52%), Gaps = 6/42 (14%)
Query 89 TIVNLIG-----AKKAILTVV-LLGAILTYSGVSLFVAVFAI 124
T++ LI A ++L V L+G T +SL VA++ +
Sbjct 246 TVITLIQETMGLADNSLLAAVRLIGNASTSMVISLLVAIYTM 287
>P12012 Gluconate permease [Bacillus subtilis (strain 168)]
Length=448
Score = 45.1 bits (105), Expect = 3e-08
Identities = 44/147 (30%), Positives = 69/147 (47%), Gaps = 15/147 (10%)
Query 65 LVFLLGAIFGKVVEMSGIAESIAKTIVNLIGAKKAILTVVLLGAILTYSGVSLF--VAVF 122
L+F LGA+ GK++ SG A+ IA T+VN G K VV+ I+ G++LF V +
Sbjct 63 LIFGLGAMLGKLIADSGGAQRIAMTLVNKFGEKNIQWAVVIASFII---GIALFFEVGLV 119
Query 123 AIYPFANQLFQQANIPKRLIPGTIALGAFTFTMDALPGTPQIQNVIPTTF---FGTNIYA 179
+ P + ++ I L G + A + T LP P PT +G NI
Sbjct 120 LLIPIVFAISRELKI-SILFLGIPMVAALSVTHGFLPPHPG-----PTAIAGEYGANIGE 173
Query 180 APFLGIIGAI-FVLCMGLSYLEWRRRV 205
G I A+ VL G + ++ +++
Sbjct 174 VLLYGFIVAVPTVLIAGPLFTKFAKKI 200
Score = 18.5 bits (36), Expect = 6.3
Identities = 20/67 (30%), Positives = 27/67 (40%), Gaps = 2/67 (3%)
Query 282 DVAKTGAIWAVGLALIVGIITAILFDYQRVMSQF-KEGVNASIGGSLLAVMNTASEYGFG 340
+V G I AV LI G + F + V + F K G AS+G + +G
Sbjct 173 EVLLYGFIVAVPTVLIAGPLFT-KFAKKIVPASFAKNGNIASLGTQKTFNLEETPGFGIS 231
Query 341 AIIAALP 347
A LP
Sbjct 232 VFTAMLP 238
>Q9ZIJ1 Gluconate permease [Pseudomonas aeruginosa (strain ATCC
15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C
/ PRS 101 / PAO1)]
Length=450
Score = 38.5 bits (88), Expect = 4e-06
Identities = 79/366 (22%), Positives = 145/366 (40%), Gaps = 52/366 (14%)
Query 36 VLLINPANVLPFYSGVFMPKMVNFIKDYF--------LVFLLGAIFGKVVEMSGIAESIA 87
+ LI A L SG+ + K+V +D F ++ LG + GK++ SG A+ IA
Sbjct 34 IALIIAAGFLGLTSGMPVEKIVKSFQDGFGGVLGFVGVILALGTMLGKLMADSGGADQIA 93
Query 88 KTIVNLIGAKKAILTVVLLGAILTYSGVSLF--VAVFAIYPFANQLFQQANIP--KRLIP 143
+T++ G K+ + ++L A L G+ LF + + P + +++ + K IP
Sbjct 94 RTLIRAFG-KERVHWSMMLAAFLV--GIPLFFEIGFILLIPLVFIVARRSGVSLIKIGIP 150
Query 144 GTIALGAFTFTMDALPGTPQIQNVIPTTFFGTNIYAAPFLGIIGAIFVLCMGLSYLEWRR 203
L A + PG ++ FG +I G+I A+
Sbjct 151 LLAGLSAVHGLVPPHPGP-----LLAIGVFGADIGKTILYGLIVAL-------------- 191
Query 204 RVAARAGEGYAGFDQAAFSDVQNT-IVDANENRTFLRQCLAF---VPLILVAVMNKYLST 259
AA AG + + +V+ + + +F + +L+ V L T
Sbjct 192 PTAAIAGPLFGALVSRYIPGTPSAELVEQIAHEPETQDLPSFGVTLATVLLPVFLMLLKT 251
Query 260 AIKTWYPNGFDFNA-IGLANYTVDVAKTGAIWAVGLALIVGIITAILFDYQRVMSQFK-- 316
+P+G F A + + + + A+ LAL+V + T F Y R K
Sbjct 252 FADVAFPDGHAFRAWMDMIGHPIS--------ALLLALLVALYT---FGYARGFDSKKIL 300
Query 317 EGVNASIGGSLLAVMNTASEYGFGAIIAALPGFALISHALSHTFTNPLVNGAVTTTTLAG 376
++ S+ + VM + GF ++ A +I H + +P++ + +
Sbjct 301 RLLDQSLAPTAAIVMIIGAGGGFKQMLVASGVGDVIGHLAVNAQISPILLAWLVAAVIRI 360
Query 377 ITGSAS 382
TGSA+
Sbjct 361 ATGSAT 366
Score = 26.9 bits (58), Expect = 0.014
Identities = 47/196 (24%), Positives = 79/196 (40%), Gaps = 26/196 (13%)
Query 18 AYRGFSVILMAPICALLAVLLINPANVLPFYSGVFMPKMVNFIKDYFL------VFLLGA 71
A+R + ++ PI ALL LL+ A Y+ F K + + D L V ++GA
Sbjct 262 AFRAWMDMIGHPISALLLALLV--ALYTFGYARGFDSKKILRLLDQSLAPTAAIVMIIGA 319
Query 72 --IFGKVVEMSGIAESIAKTIVN------LIGAKKAILTVVLLGA--ILTYSGVSLFVAV 121
F +++ SG+ + I VN L+ A + + G+ + T +G + V V
Sbjct 320 GGGFKQMLVASGVGDVIGHLAVNAQISPILLAWLVAAVIRIATGSATVATITGAGIVVPV 379
Query 122 FAIYPFAN-QLFQQANIPKRLIPGTIALGAFTFTMDALPGTPQIQNVIPTTFFGTNIYAA 180
+ P N +L A LI + F Q N+ + F T
Sbjct 380 IDLIPGVNRELLVLATGAGSLILSHVNDAGFWL-------VKQYFNMSVSETFKTWTAME 432
Query 181 PFLGIIGAIFVLCMGL 196
L ++G +F+L + L
Sbjct 433 TILSVVGLVFILLLSL 448
>O31862 Uncharacterized permease YojA [Bacillus subtilis (strain
168)]
Length=444
Score = 38.1 bits (87), Expect = 5e-06
Identities = 36/127 (28%), Positives = 59/127 (46%), Gaps = 8/127 (6%)
Query 65 LVFLLGAIFGKVVEMSGIAESIAKTIVNLIGAKKAILTVVLLGAILTYSGVSLF--VAVF 122
LVF LGA+ G++V +G IA T+++ G K+ VV+ I+ G++LF V +
Sbjct 63 LVFGLGAMLGRLVSDAGGGYRIAITLIDKFGRKRIQAAVVVASFII---GIALFFEVGLV 119
Query 123 AIYPFANQLFQQANIPKRLIPGTIALGAFTFTMDALPGTPQIQNVIPTTFFGTNIYAAPF 182
+ P + ++ +P L G A T LP P + + +G +I
Sbjct 120 LLIPIVYAIAKELKMP-FLYLGIPMAAALNVTHGFLPPHPAPTAI--SVAYGAHIGQVLL 176
Query 183 LGIIGAI 189
GII A+
Sbjct 177 FGIIIAV 183
Score = 23.1 bits (48), Expect = 0.23
Identities = 29/131 (22%), Positives = 55/131 (42%), Gaps = 22/131 (17%)
Query 22 FSVILMAPICALLAVLLINPANVLPFYSGVFMPKMVNFIKDYFLVFLLGAIFGKVVEMSG 81
F VI MA + + ++LL + + P I ++ +G + + + M
Sbjct 237 FPVIFMA-MATIFSLLLSEHSKGKDIIEFIGTPGTAMLISLLLALYTMG--YARKISMQE 293
Query 82 IAESIAKTIVNLIGAKKAILTVVLLGA-----ILTYSGVSLFVAVFAIYPFANQLFQQAN 136
I SI+++I + A++ +++ G +L GV +VA F F+Q N
Sbjct 294 IGRSISESISQI-----AMMLLIIGGGGAFKQVLIDGGVGDYVADF---------FRQTN 339
Query 137 IPKRLIPGTIA 147
+ + TIA
Sbjct 340 MSPLFVAWTIA 350
Score = 20.4 bits (41), Expect = 1.6
Identities = 22/98 (22%), Positives = 40/98 (41%), Gaps = 7/98 (7%)
Query 273 AIGLANYTVDVAKTGAIWAVGLALIVGIITAILFDYQRVMSQF----KEGVNASIGGSLL 328
A+ +A++ + +A + VGL L++ I+ AI + + +N + G
Sbjct 100 AVVVASFIIGIA---LFFEVGLVLLIPIVYAIAKELKMPFLYLGIPMAAALNVTHGFLPP 156
Query 329 AVMNTASEYGFGAIIAALPGFALISHALSHTFTNPLVN 366
TA +GA I + F +I + PL N
Sbjct 157 HPAPTAISVAYGAHIGQVLLFGIIIAVPTTVIAGPLFN 194
>A0A0H2VAP9 D-serine transporter DsdX [Escherichia coli O6:H1
(strain CFT073 / ATCC 700928 / UPEC)]
Length=445
Score = 38.1 bits (87), Expect = 5e-06
Identities = 57/217 (26%), Positives = 94/217 (43%), Gaps = 37/217 (17%)
Query 1 MWELFVILLSLSLLMYTAYRGFSVILMAPICALLAVLLINPANVLPFYSGVFMPK----M 56
+W + +L+S+ L++ T I+ LA+LL + F+ G M M
Sbjct 5 IWVVSTLLISIVLIVLT-------IVKFKFHPFLALLLAS------FFVGTMMGMGPLDM 51
Query 57 VNFIKDYF---LVFL-----LGAIFGKVVEMSGIAESIAKTIVNLIGAKKAILTVVLLGA 108
VN I+ L FL LG I GK++E+SG AE I T+ ++ +VL+G
Sbjct 52 VNAIESGIGGTLGFLAAVIGLGTILGKMMEVSGAAERIGLTLQRCRWLSADVI-MVLVGL 110
Query 109 ILTYSGVSLF--VAVFAIYPFANQLFQQAN--IPKRLIPGTIALGAFTFTMDALPGTPQI 164
I G++LF V V + P A + ++ N + K IP AL A + P +
Sbjct 111 I---CGITLFVEVGVVLLIPLAFSIAKKTNTSLLKLAIPLCTALMAVHCVVPPHPAALYV 167
Query 165 QNVIPTTFFGTNIYAAPFLGIIGAIFVLCMGLSYLEW 201
N + +Y ++G + L G +L++
Sbjct 168 ANKLGADIGSVIVYGL----LVGLMASLIGGPLFLKF 200
>P08555 D-serine transporter DsdX [Escherichia coli (strain K12)]
Length=445
Score = 37.7 bits (86), Expect = 6e-06
Identities = 57/217 (26%), Positives = 94/217 (43%), Gaps = 37/217 (17%)
Query 1 MWELFVILLSLSLLMYTAYRGFSVILMAPICALLAVLLINPANVLPFYSGVFMPK----M 56
+W + +L+S+ L++ T I+ LA+LL + F+ G M M
Sbjct 5 IWVVSTLLISIVLIVLT-------IVKFKFHPFLALLLAS------FFVGTMMGMGPLDM 51
Query 57 VNFIKDYF---LVFL-----LGAIFGKVVEMSGIAESIAKTIVNLIGAKKAILTVVLLGA 108
VN I+ L FL LG I GK++E+SG AE I T+ ++ +VL+G
Sbjct 52 VNAIESGIGGTLGFLAAVIGLGTILGKMMEVSGAAERIGLTLQRCRWLSVDVI-MVLVGL 110
Query 109 ILTYSGVSLF--VAVFAIYPFANQLFQQAN--IPKRLIPGTIALGAFTFTMDALPGTPQI 164
I G++LF V V + P A + ++ N + K IP AL A + P +
Sbjct 111 I---CGITLFVEVGVVLLIPLAFSIAKKTNTSLLKLAIPLCTALMAVHCVVPPHPAALYV 167
Query 165 QNVIPTTFFGTNIYAAPFLGIIGAIFVLCMGLSYLEW 201
N + +Y ++G + L G +L++
Sbjct 168 ANKLGADIGSVIVYGL----LVGLMASLIGGPLFLKF 200
Score = 21.2 bits (43), Expect = 0.91
Identities = 15/46 (33%), Positives = 27/46 (59%), Gaps = 6/46 (13%)
Query 82 IAESIAKTIVNLIGAKKAILTVVL--LGAILTYSGVSLFVAVFAIY 125
IA + KTI L A+++ L +++ +G +T ++F+AVF Y
Sbjct 239 IALMLVKTIAELNMARESGLYILVEFIGNPIT----AMFIAVFVAY 280
>Q9Z670 Gluconate permease [Zymomonas mobilis subsp. mobilis (strain
ATCC 31821 / ZM4 / CP4)]
Length=451
Score = 28.5 bits (62), Expect = 0.005
Identities = 99/487 (20%), Positives = 187/487 (38%), Gaps = 76/487 (16%)
Query 21 GFSVILMAPICALLAVLLINPANVLPFYS------------GVFMPKMVNFIKDYFLVFL 68
G ++L A ++ +L+I + PF S G+ + K+++ +D
Sbjct 5 GTMLLLYALASIIILILMIAKWRLNPFVSLILVSIGMGAVTGMPLTKVLSAFQDG----- 59
Query 69 LGAIFG-------------KVVEMSGIAESIAKTIVNLIGAKKAILTVVLLGAILTYSGV 115
LG+ G K++ SG AE IA T + + G K ++++ I+ G+
Sbjct 60 LGSGIGSTASVIALGTMLGKILAESGGAERIATTTIKIFGPKLIHWAMLVIAFIV---GI 116
Query 116 SLF--VAVFAIYPFANQLFQQANIPKRLIPGTIALGAFTFTMDAL----PGTPQIQNVIP 169
+F V + P L + + I L+ TI L A T+ L PG+ Q ++
Sbjct 117 PIFYQVGFILLIPLVFTLGRASGI--SLVKLTIPLCAGLATVHGLLPPHPGSMQCVEMLH 174
Query 170 TTFFGTNIYAAPFLGIIGAIFVLCMGLSYLEW-RRRVAARAGEGYAGFDQAAFSDVQNTI 228
T +Y I+G + G Y W R+ A +A ++
Sbjct 175 ADVGKTILYGF----IVGFPAAILAGPLYGNWITPRIQLPAHNPFA-----------ESL 219
Query 229 VDANENRTFLRQCLAFVPLILVAVMNKYLSTAIKTWYPNGFDFNAIGLANYTVDVAKTGA 288
+++ L + IL+ V+ S+ + P+G + A N+ D
Sbjct 220 EGSSDQDKNLPGFWLTIFSILLPVLLMVFSSGANIFLPHGNNIRA--FMNFMGD-----P 272
Query 289 IWAVGLALIVGIITAILFDYQRVMSQFKEGVNASIGGSLLAVMNTASEYGFGAIIAALPG 348
+ ++ +AL+V ++T + F + + N +G + ++ + GF I+ G
Sbjct 273 VVSLLIALLVSMVT-LGFWRGFSSADLLKFTNDCLGPTAGILLLIGAGGGFSEILYR-AG 330
Query 349 FALISHALSHTF-TNPLVNGAVTTTTLAGITGSASGGMSIALSAMAEQYNAAILAAGI-P 406
+ LSH +P++ G + + TGS + MS++ +A G
Sbjct 331 VSNAMADLSHVMHLSPIMLGFIIAAVIRVATGSQTVAMSMSGGMLAP---IIFSTPGFHS 387
Query 407 PEVMHRVVAMASGGMDTLPH--NGAVITLLAVTGLTHKQSYKDIFAVTIIKTMAVFVVIA 464
PE++ V G L H +GA L +T Q++K I ++A ++
Sbjct 388 PELL---VLSIGAGSSILSHVNDGAFWLLKEYLNMTVSQTFKTWTVSVTIASIAALILTF 444
Query 465 AFTWFGI 471
G+
Sbjct 445 GLQALGL 451
Score = 26.2 bits (56), Expect = 0.025
Identities = 23/102 (23%), Positives = 49/102 (48%), Gaps = 19/102 (19%)
Query 4 LFVILLSLSLLMYTA-----------YRGFSVILMAPICALLAVLLINPANVLPFYSGVF 52
+F ILL + L+++++ R F + P+ +LL LL++ L F+ G
Sbjct 236 IFSILLPVLLMVFSSGANIFLPHGNNIRAFMNFMGDPVVSLLIALLVSMV-TLGFWRGFS 294
Query 53 MPKMVNFIKDYF-----LVFLLGA--IFGKVVEMSGIAESIA 87
++ F D ++ L+GA F +++ +G++ ++A
Sbjct 295 SADLLKFTNDCLGPTAGILLLIGAGGGFSEILYRAGVSNAMA 336
Score = 18.9 bits (37), Expect = 4.8
Identities = 11/33 (33%), Positives = 17/33 (52%), Gaps = 0/33 (0%)
Query 5 FVILLSLSLLMYTAYRGFSVILMAPICALLAVL 37
F++L+ L + A V L P+CA LA +
Sbjct 124 FILLIPLVFTLGRASGISLVKLTIPLCAGLATV 156
Lambda K H a alpha
0.328 0.141 0.416 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 2185960
Database: 6555a887ec890a53aa5dae7c2c1823d8.SwissProt.fasta
Posted date: May 29, 2024 2:45 PM
Number of letters in database: 5,843
Number of sequences in database: 13
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
