BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: 6da04a1405ffe3c2aa00def26249a5d4.SwissProt.fasta
           11 sequences; 6,074 total letters



Query= ACIAD2518

Length=533
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

P75745 5-oxoprolinase subunit C [Escherichia coli (strain K12)]       129     5e-37
Q7WY77 5-oxoprolinase subunit C [Bacillus subtilis (strain 168)]      129     9e-37
P60495 5-oxoprolinase subunit B [Bacillus subtilis (strain 168)]      115     1e-32
A5H0J2 Urea carboxylase / Allophanate hydrolase [Lachancea kluyveri]  119     3e-31
P32528 Urea carboxylase / Allophanate hydrolase [Saccharomyces ce...  115     5e-30
P0AAV5 5-oxoprolinase subunit B [Escherichia coli O157:H7]            102     4e-28
P0AAV4 5-oxoprolinase subunit B [Escherichia coli (strain K12)]       102     4e-28
P44298 5-oxoprolinase subunit C [Haemophilus influenzae (strain A...  102     2e-27
P44299 5-oxoprolinase subunit B [Haemophilus influenzae (strain A...  90.1    7e-24
Q9V0E1 3-methyl-2-oxobutanoate hydroxymethyltransferase [Pyrococc...  36.2    2e-05
Q5JCY6 3-methyl-2-oxobutanoate hydroxymethyltransferase [Thermoco...  36.2    2e-05


>P75745 5-oxoprolinase subunit C [Escherichia coli (strain K12)]
Length=310

 Score = 129 bits (325),  Expect = 5e-37
 Identities = 93/297 (31%), Positives = 142/297 (48%), Gaps = 18/297 (6%)

Query  231  VFELLQTGLQSLVQDQGRTHQAALGVGRSGAMDQTALSQANRIVGNPDHAAVIEILNGGL  290
            + ++++ G+ + VQD GR      G+   GA+D  AL  AN +VGN  +A  +EI  G L
Sbjct  1    MLKIIRAGMYTTVQDGGRHGFRQSGISHCGALDMPALRIANLLVGNDANAPALEITLGQL  60

Query  291  KLKVLQSTVVAVTGAASHIGVSYAGQAQVKVPDYSP-----IALDCGDLLYIDSPHAGLR  345
             ++       A+TGA            + ++ D +      + +  G  L +  P  G+R
Sbjct  61   TVEFETDGWFALTGAG----------CEARLDDNAVWTGWRLPMKAGQRLTLKRPQHGMR  110

Query  346  HYLAIRGGIKTEKILGSASFDTLAELGTPPLKPHDFIYSAELSVGSVLLHEKCAQQLPKI  405
             YLA+ GGI    ++GS S D   ++G   L+         L +G        AQ + ++
Sbjct  111  SYLAVAGGIDVPPVMGSCSTDL--KVGIGGLEGRLLKDGDRLPIGKSKRDSMEAQGVKQL  168

Query  406  GDVVEVDVILGPRTDWFEPESLTQFFQQQWLVTQESNRIGLRLSAGLPLKRQIHGELASE  465
                 +  + GP    F+  S   F++  W ++ +SNR+G RL  G  LKR    EL S 
Sbjct  169  LWGNRIRALPGPEYHEFDRASQDAFWRSPWQLSSQSNRMGYRLQ-GQILKRTTDRELLSH  227

Query  466  GTCTGALQIPPNGQPVLFMNDHPLTGGYPVLGAIAIDHLDRVAQIPPGCLIQFRQKS  522
            G   G +Q+P NGQP++ MND   TGGYP +  I    +  +AQIP G  I F Q S
Sbjct  228  GLLPGVVQVPHNGQPIVLMNDAQTTGGYPRIACIIEADMYHLAQIPLGQPIHFVQCS  284


>Q7WY77 5-oxoprolinase subunit C [Bacillus subtilis (strain 168)]
Length=335

 Score = 129 bits (325),  Expect = 9e-37
 Identities = 98/324 (30%), Positives = 159/324 (49%), Gaps = 32/324 (10%)

Query  233  ELLQTGLQSLVQDQGRTHQAALGVGRSGAMDQTALSQANRIVGNPDHAAVIEI--LNGGL  290
            ++L+ GL + VQD GRT     GV  SGAMD  +L  AN ++GN ++ A +EI  +  G 
Sbjct  2    KVLKPGLLTTVQDIGRTGYQKYGVLASGAMDTVSLRIANLLIGNGENEAGLEITMMGPGP  61

Query  291  KLKVLQSTVVAVTGAASHIGVSYAGQAQVKVPDYSPIALDCGDLLYIDSPHAGLRHYLAI  350
                 + T++AVTGA   + ++       + P + P+ +     +       G R YLA 
Sbjct  62   SFHFSKQTLIAVTGADFTLRIN-----DEEAPLWKPVLIKENSTVSFGPCKLGSRAYLAA  116

Query  351  RGGIKTEKILGSASFDTLAELGT---PPLKPHDFIYSAELSVGSVLLHEKCAQQLPKIGD  407
             GGI+   ++ S S      +G      L+  D +   E+S  S  +  + + QL K G 
Sbjct  117  AGGIEVPAVMESKSTYVRGSIGGLHGRALQKEDELNIGEMSALSQTILSRLSSQLGKQGF  176

Query  408  VVE-----------------VDVILGPRTDWFEPESLTQFFQQQWLVTQESNRIGLRLSA  450
                                + V+ G +  +F  ES T+F+++ + VT +S+R+G RL  
Sbjct  177  AAPKWSVSRGRFLPLKKNPVIRVLEGKQFAFFTEESKTRFYEEAFRVTPQSDRMGYRLK-  235

Query  451  GLPLKRQIHGELASEGTCTGALQIPPNGQPVLFMNDHPLTGGYPVLGAIAIDHLDRVAQI  510
            G PL+ +   E+ SE    G +Q+PP+G P++ + D   TGGYP +  I    L  V+QI
Sbjct  236  GEPLELKAPLEMVSEAVSFGTVQVPPDGNPIILLADRQTTGGYPRIAHIISADLPIVSQI  295

Query  511  PPGCLIQFR----QKSEILDLDKE  530
             PG  +QF     Q++E L +++E
Sbjct  296  MPGEHVQFEPVSLQEAEALAVERE  319


>P60495 5-oxoprolinase subunit B [Bacillus subtilis (strain 168)]
Length=240

 Score = 115 bits (289),  Expect = 1e-32
 Identities = 73/216 (34%), Positives = 114/216 (53%), Gaps = 18/216 (8%)

Query  17   ELNDPEHTVALFRHLETIKHPHIVEMIPAATTILVYFDR----------LNTEVSALIRY  66
            ++N   H  A +  +E    P  +E IPA T++ V++D           +++   ++ R 
Sbjct  26   QVNGIVHAAAAY--IEEQPFPGFIECIPAFTSLTVFYDMYEVYKHLPQGISSPFESVKRD  83

Query  67   IKSQRIERQQRHSVAKVVIDVTYD-----GPDLHHVAELLGVTVSEVIYRHSNTCWNVAF  121
            ++ +  E  + + V + ++++        GPDL  VA++  ++  EVI  H+N  + V  
Sbjct  84   VEERLAEIAEDYEVNRRIVEIPVCYGGEFGPDLEEVAKINQLSPEEVIDIHTNGEYVVYM  143

Query  122  IGFAPGFGYLNSPDHPFGSIPRLSSPRKKIQAGSVALAGEYTGIYPKDSPGGWQLIGSTP  181
            +GFAPGF +L        + PR SSPR  I AGSV +AG  TG+YP  +PGGWQLIG TP
Sbjct  144  LGFAPGFPFLGGMSKRIAA-PRKSSPRPSIPAGSVGIAGLQTGVYPISTPGGWQLIGKTP  202

Query  182  QQMWDIHRDPPALLRAGAQVIFRDITRQPSHVVVPE  217
              ++    +PP LLRAG  V F  I+ +  H    E
Sbjct  203  LALFRPQENPPTLLRAGDIVKFVRISEKDYHAYKEE  238


>A5H0J2 Urea carboxylase / Allophanate hydrolase [Lachancea kluyveri]
Length=1830

 Score = 119 bits (297),  Expect = 3e-31
 Identities = 101/310 (33%), Positives = 142/310 (46%), Gaps = 29/310 (9%)

Query  232   FELLQTGLQSLVQDQ-GRTHQAALGVGRSGAMDQTALSQANRIVGNPDHAAVIEILNGGL  290
             FE+   G  + VQD  GR     +GV  SG MD  +   ANRIVGN   A  IE+   G 
Sbjct  1073  FEVTSPGAYTTVQDYPGRVGYWRIGVPPSGPMDAYSFRLANRIVGNHYKAPAIELTLNGP  1132

Query  291   KLKVLQSTVVAVTGAASHIGVSYAGQAQVKVPDYSPIALDCGDLLYIDSPHAGLRHYLAI  350
             K+     T++A++G     G++        +    PI ++ GD L I     G R YLAI
Sbjct  1133  KILFHTETIIAISG-----GIAACSLNDKPIEQNKPIQVNRGDHLAIGKLSVGCRAYLAI  1187

Query  351   RGGIKTEKILGSASFDTLAELG---TPPLKPHDFIYSAELSVGSVLL-------HEKCAQ  400
             RGGI   + LGS S   L  +G      LK  D ++  +  + S  L           A 
Sbjct  1188  RGGIDVPEYLGSRSTFALGNMGGYNGRVLKLGDVLFLNQPELASSSLPGPAYEPQAPPAN  1247

Query  401   QLPKIGDVVE--VDVILGPR--TDWFEPESLTQFFQQQWLVTQESNRIGLRLSAGLPL--  454
              LPKI D  E  + V  GP    D+F+PES+ +FF ++W V   SNR G+RL    P   
Sbjct  1248  LLPKISDDKEWTIGVTCGPHGSPDFFKPESVEEFFSEKWKVHYNSNRFGVRLIGPKPKWA  1307

Query  455   -----KRQIHGELASEGTCT-GALQIPPNGQPVLFMNDHPLTGGYPVLGAIAIDHLDRVA  508
                  +  +H   A +   + GA+      +PV+  +D P  GG+     +    L +V 
Sbjct  1308  RKDGGEGGLHPSNAHDYVYSLGAINF-TGDEPVIITSDGPSLGGFVCQAVVPEAELWKVG  1366

Query  509   QIPPGCLIQF  518
             Q+ PG  IQF
Sbjct  1367  QVKPGDSIQF  1376


 Score = 39.7 bits (91),  Expect = 2e-06
 Identities = 42/151 (28%), Positives = 67/151 (44%), Gaps = 21/151 (14%)

Query  97    VAELLGVTVSEVIYRHSNTCWNVAFIGFAPGFGYLNSP-------DHPF-GSIPRLSSPR  148
             VAE+  +T  +V     N  ++  F+    G  +L +P        H F GS  + +  R
Sbjct  1559  VAEVNDITHKDV----ENMLYSARFLVLGLGDVFLGAPCAVPLDPRHRFLGS--KYNPSR  1612

Query  149   KKIQAGSVALAGEYTGIYPKDSPGGWQLIGSTPQQMWD------IHRDPPALLRAGAQVI  202
                + G V + G Y  IY  DSPGG+QL+G T   +WD        ++ P LL    QV 
Sbjct  1613  TYTKNGVVGIGGMYMCIYAMDSPGGYQLVGRT-IPIWDKLKLGSHSQEHPWLLTPFDQVE  1671

Query  203   FRDITRQPSHVVVPEIKIPRQPEQHLQPVFE  233
             F  ++ +       + +  + P Q  + VF+
Sbjct  1672  FYPVSEEELDRFTEDCENGKFPVQVEESVFD  1702


>P32528 Urea carboxylase / Allophanate hydrolase [Saccharomyces 
cerevisiae (strain ATCC 204508 / S288c)]
Length=1835

 Score = 115 bits (287),  Expect = 5e-30
 Identities = 103/312 (33%), Positives = 143/312 (46%), Gaps = 25/312 (8%)

Query  226   QHLQPVFELLQTGLQSLVQDQ-GRTHQAALGVGRSGAMDQTALSQANRIVGNPDHAAVIE  284
             Q+     E+   G  + +QD  GR     +GV  SG MD  +   ANRIVGN      IE
Sbjct  1074  QYEPTAIEITLPGAHTSIQDYPGRVGYWRIGVPPSGPMDAYSFRLANRIVGNDYRTPAIE  1133

Query  285   ILNGGLKLKVLQSTVVAVTGAASHIGVSYAGQAQVKVPDYSPIALDCGDLLYIDSPHAGL  344
             +   G  +     TV+A+TG  +   +   GQ   ++P + P+ +  G  L I    +G 
Sbjct  1134  VTLTGPSIVFHCETVIAITGGTALCTLD--GQ---EIPQHKPVEVKRGSTLSIGKLTSGC  1188

Query  345   RHYLAIRGGIKTEKILGSASFDTLAELG---TPPLKPHD--FIYSAELSVGSVLLHEKCA  399
             R YL IRGGI   K LGS S  TL  +G      LK  D  F+ S E +     L +   
Sbjct  1189  RAYLGIRGGIDVPKYLGSYSTFTLGNVGGYNGRVLKLGDVLFLPSNEENKSVECLPQNIP  1248

Query  400   QQL-PKIGDVVE--VDVILGPR--TDWFEPESLTQFFQQQWLVTQESNRIGLRLSAGLP-  453
             Q L P+I +  E  + V  GP    D+F+PES+ +FF ++W V   SNR G+RL    P 
Sbjct  1249  QSLIPQISETKEWRIGVTCGPHGSPDFFKPESIEEFFSEKWKVHYNSNRFGVRLIGPKPK  1308

Query  454   LKRQIHGELASEGTCT-------GALQIPPNGQPVLFMNDHPLTGGYPVLGAIAIDHLDR  506
               R   GE     + T       GA+      +PV+   D P  GG+     +    L +
Sbjct  1309  WARSNGGEGGMHPSNTHDYVYSLGAINF-TGDEPVIITCDGPSLGGFVCQAVVPEAELWK  1367

Query  507   VAQIPPGCLIQF  518
             V Q+ PG  IQF
Sbjct  1368  VGQVKPGDSIQF  1379


 Score = 37.0 bits (84),  Expect = 2e-05
 Identities = 30/98 (31%), Positives = 49/98 (50%), Gaps = 15/98 (15%)

Query  97    VAELLGVTVSEVIYRHSNTCWNVAFIGFAPGFGYLNSP-------DHPF-GSIPRLSSPR  148
             +A + G++ +EV     +  ++  F+    G  +L SP        H F GS  + +  R
Sbjct  1562  IANVNGISRNEVY----DMLYSARFMVLGLGDVFLGSPCAVPLDPRHRFLGS--KYNPSR  1615

Query  149   KKIQAGSVALAGEYTGIYPKDSPGGWQLIGSTPQQMWD  186
                + G+V + G Y  IY  +SPGG+QL+G T   +WD
Sbjct  1616  TYTERGAVGIGGMYMCIYAANSPGGYQLVGRT-IPIWD  1652


>P0AAV5 5-oxoprolinase subunit B [Escherichia coli O157:H7]
Length=218

 Score = 102 bits (254),  Expect = 4e-28
 Identities = 77/218 (35%), Positives = 108/218 (50%), Gaps = 23/218 (11%)

Query  1    LQNMRFLAVNLDSFLIELNDPEHTVALFRHL-----ETIKHPHIVEMIPAATTILVYFDR  55
            +Q  R   +   + ++EL +P  T+A  + +       +  P++VE IP    I V    
Sbjct  1    MQRARCYLIGETAVVLEL-EPPVTLASQKRIWRLAQRLVDMPNVVEAIPGMNNITVILR-  58

Query  56   LNTEVSALIRYIKSQR-------IERQQRHSVAKVVIDVTYDG---PDLHHVAELLGVTV  105
             N E  AL    + QR       +E + R     + I V Y G   PDL  VA   G++ 
Sbjct  59   -NPESLALDAIERLQRWWEESEALEPESRF----IEIPVVYGGAGGPDLAVVAAHCGLSE  113

Query  106  SEVIYRHSNTCWNVAFIGFAPGFGYLNSPDHPFGSIPRLSSPRKKIQAGSVALAGEYTGI  165
             +V+  HS+  + V F+GF PGF YL S      + PR + PR  + AGSV + G  TG+
Sbjct  114  KQVVELHSSVEYVVWFLGFQPGFPYLGSLPEQLHT-PRRAEPRLLVPAGSVGIGGPQTGV  172

Query  166  YPKDSPGGWQLIGSTPQQMWDIHRDPPALLRAGAQVIF  203
            YP  +PGGWQLIG T   ++D  RD P LLR G  V F
Sbjct  173  YPLATPGGWQLIGHTSLSLFDPARDEPILLRPGDSVRF  210


>P0AAV4 5-oxoprolinase subunit B [Escherichia coli (strain K12)]
Length=218

 Score = 102 bits (254),  Expect = 4e-28
 Identities = 77/218 (35%), Positives = 108/218 (50%), Gaps = 23/218 (11%)

Query  1    LQNMRFLAVNLDSFLIELNDPEHTVALFRHL-----ETIKHPHIVEMIPAATTILVYFDR  55
            +Q  R   +   + ++EL +P  T+A  + +       +  P++VE IP    I V    
Sbjct  1    MQRARCYLIGETAVVLEL-EPPVTLASQKRIWRLAQRLVDMPNVVEAIPGMNNITVILR-  58

Query  56   LNTEVSALIRYIKSQR-------IERQQRHSVAKVVIDVTYDG---PDLHHVAELLGVTV  105
             N E  AL    + QR       +E + R     + I V Y G   PDL  VA   G++ 
Sbjct  59   -NPESLALDAIERLQRWWEESEALEPESRF----IEIPVVYGGAGGPDLAVVAAHCGLSE  113

Query  106  SEVIYRHSNTCWNVAFIGFAPGFGYLNSPDHPFGSIPRLSSPRKKIQAGSVALAGEYTGI  165
             +V+  HS+  + V F+GF PGF YL S      + PR + PR  + AGSV + G  TG+
Sbjct  114  KQVVELHSSVEYVVWFLGFQPGFPYLGSLPEQLHT-PRRAEPRLLVPAGSVGIGGPQTGV  172

Query  166  YPKDSPGGWQLIGSTPQQMWDIHRDPPALLRAGAQVIF  203
            YP  +PGGWQLIG T   ++D  RD P LLR G  V F
Sbjct  173  YPLATPGGWQLIGHTSLSLFDPARDEPILLRPGDSVRF  210


>P44298 5-oxoprolinase subunit C [Haemophilus influenzae (strain 
ATCC 51907 / DSM 11121 / KW20 / Rd)]
Length=309

 Score = 102 bits (254),  Expect = 2e-27
 Identities = 81/296 (27%), Positives = 138/296 (47%), Gaps = 17/296 (6%)

Query  231  VFELLQTGLQSLVQDQGRTHQAALGVGRSGAMDQTALSQANRIVGNPDHAAVIEILNGGL  290
            + ++L    ++ +QD GR      G+   GAMD+ AL   N ++GN ++   IE+  GG+
Sbjct  1    MIDILDVKSRATIQDLGRFGLRRFGISHCGAMDKLALRAGNILLGNAENVPAIEVPLGGI  60

Query  291  KLKVLQSTVVAVTGAASHIGVSYAGQAQVKVPDYSPIALDCGDLLYIDSPHAGLRHYLAI  350
             L+  Q     VTGA   + +         V  Y    +  G +L +     G+  YL +
Sbjct  61   TLQFQQDMNFCVTGAFYEMMLD-----DKPVFAYWRYQVRAGQILKMARAKIGMYGYLCV  115

Query  351  RGGIKTEKILGSASFDTLAELGTPP---LKPHDFIYSAELSVGSVLLHEKCAQQLPKIGD  407
            +GG    + L S S D  A++G      L+  D + +A      +L  E     +P + D
Sbjct  116  QGGFVLPQALNSCSTDLRAQIGGIEGRCLQAGDQLQTAN---DHILRSEIGIAPIP-LRD  171

Query  408  VVEVDVILGPRTDWFEPESLTQFFQQQWLVTQESNRIGLRLSA-GLPLKRQIHGELASEG  466
            V+    +       F+ +S   +++ +W +   S+R+G R     L LK+ +  E+ S  
Sbjct  172  VIR--ALPSSEYQAFKRKSQYYWWRNEWTLQSNSDRMGYRFQGQTLELKQPL--EMLSHA  227

Query  467  TCTGALQIPPNGQPVLFMNDHPLTGGYPVLGAIAIDHLDRVAQIPPGCLIQFRQKS  522
               G++Q+PP+GQP++ M D   TGGYP +  +    L  +AQ+  G  I+F   S
Sbjct  228  IQFGSVQVPPSGQPIILMADAQTTGGYPKIANVIDADLGALAQVRLGSTIKFEAVS  283


>P44299 5-oxoprolinase subunit B [Haemophilus influenzae (strain 
ATCC 51907 / DSM 11121 / KW20 / Rd)]
Length=213

 Score = 90.1 bits (222),  Expect = 7e-24
 Identities = 50/113 (44%), Positives = 63/113 (56%), Gaps = 1/113 (1%)

Query  91   GPDLHHVAELLGVTVSEVIYRHSNTCWNVAFIGFAPGFGYLNSPDHPFGSIPRLSSPRKK  150
            G DL  VA+    T   +I  HS   + V  IGF  GF YL        + PR ++PR  
Sbjct  95   GQDLSDVAKFHQTTPERIIQMHSEPIYTVYMIGFQAGFPYLGGLPENLHT-PRRATPRTV  153

Query  151  IQAGSVALAGEYTGIYPKDSPGGWQLIGSTPQQMWDIHRDPPALLRAGAQVIF  203
            + AGSV + G  TGIYP  SPGGWQLIG T Q ++D ++  P LL+AG  V F
Sbjct  154  VPAGSVGIGGAQTGIYPFSSPGGWQLIGYTKQALFDKNQAQPTLLQAGDTVKF  206


 Score = 21.2 bits (43),  Expect = 0.92
 Identities = 28/112 (25%), Positives = 49/112 (44%), Gaps = 15/112 (13%)

Query  399  AQQLPKIGDVVEVDVILGPR-----TDWF-EPESLTQFFQQQWLVTQESNRIGLRLSAGL  452
            A+QL    D+VEV  +LG       TD+F + + L Q  +Q W   + S+  G  +   +
Sbjct  31   ARQLQSEQDIVEV--VLGMNNLTVFTDFFVDFKPLVQRLEQLWAELKVSDFQGRHIE--I  86

Query  453  PL-----KRQIHGELASEGTCTGALQIPPNGQPVLFMNDHPLTGGYPVLGAI  499
            P+     + Q   ++A     T    I  + +P+  +       G+P LG +
Sbjct  87   PVIYGGERGQDLSDVAKFHQTTPERIIQMHSEPIYTVYMIGFQAGFPYLGGL  138


 Score = 18.1 bits (35),  Expect = 8.8
 Identities = 8/30 (27%), Positives = 14/30 (47%), Gaps = 4/30 (13%)

Query  212  HVVVPEIKIPRQPEQHLQPVFELLQTGLQS  241
            H   PE    R  + H +P++ +   G Q+
Sbjct  105  HQTTPE----RIIQMHSEPIYTVYMIGFQA  130


>Q9V0E1 3-methyl-2-oxobutanoate hydroxymethyltransferase [Pyrococcus 
abyssi (strain GE5 / Orsay)]
Length=282

 Score = 36.2 bits (82),  Expect = 2e-05
 Identities = 21/63 (33%), Positives = 38/63 (60%), Gaps = 3/63 (5%)

Query  162  YTGIYPKD--SPGGWQLIGSTPQQMWDIHRDPPALLRAGA-QVIFRDITRQPSHVVVPEI  218
            +TG+ P+     GG++++GST +++ +I RD  AL +AGA  V+   +    + +V  E+
Sbjct  136  HTGLTPQRYLRLGGYRIMGSTEEEVEEIIRDAKALEKAGAFAVVLEFVLADVAKLVTEEV  195

Query  219  KIP  221
             IP
Sbjct  196  SIP  198


>Q5JCY6 3-methyl-2-oxobutanoate hydroxymethyltransferase [Thermococcus 
kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1)]
Length=284

 Score = 36.2 bits (82),  Expect = 2e-05
 Identities = 24/76 (32%), Positives = 43/76 (57%), Gaps = 4/76 (5%)

Query  149  KKIQAGSVALAGEYTGIYPKD--SPGGWQLIGSTPQQMWDIHRDPPALLRAGA-QVIFRD  205
            KK+    + + G +TG+ P+     GG++L+G T +++ +I RD  AL +AGA  V+   
Sbjct  124  KKLVRMGIPVMG-HTGLTPQRYLRLGGYRLMGETEEEIEEILRDAKALEKAGAFAVVLEF  182

Query  206  ITRQPSHVVVPEIKIP  221
            +    + +V  E+ IP
Sbjct  183  VLADVAKLVTEEVSIP  198



Lambda      K        H        a         alpha
   0.321    0.139    0.417    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 2646462


  Database: 6da04a1405ffe3c2aa00def26249a5d4.SwissProt.fasta
    Posted date:  May 8, 2024  3:54 PM
  Number of letters in database: 6,074
  Number of sequences in database:  11



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40