BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 07712a0eeac01f606bfab82b4c222d6a.SwissProt.fasta
5 sequences; 2,149 total letters
Query= ACIAD2589
Length=358
Score E
Sequences producing significant alignments: (Bits) Value
P28306 Endolytic murein transglycosylase [Escherichia coli (strai... 239 2e-80
P44720 Endolytic murein transglycosylase [Haemophilus influenzae ... 232 2e-77
O34758 Endolytic murein transglycosylase [Bacillus subtilis (stra... 141 1e-42
A0A0H2ZLQ1 Endolytic murein transglycosylase [Streptococcus pneum... 97.4 6e-26
Q8CYJ8 Endolytic murein transglycosylase [Streptococcus pneumonia... 96.7 1e-25
>P28306 Endolytic murein transglycosylase [Escherichia coli (strain
K12)]
Length=340
Score = 239 bits (610), Expect = 2e-80
Identities = 133/341 (39%), Positives = 206/341 (60%), Gaps = 17/341 (5%)
Query 29 KWLMAALVLLCVVGIVLWANLFKPYPIDGKRQML------AIAPGDTYTRFIDRMEKDGK 82
K L+ L+LL V+GI ++K + + ++ + PG +++ D
Sbjct 3 KVLLIILLLLVVLGIAAGVGVWKVRHLADSKLLIKEETIFTLKPGTGRLALGEQLYADKI 62
Query 83 ISLPIVLKIYQKF---LIHDSLKAGVYEIRQGMSIRQVMVMLSNAENAQMNRILVIEGTT 139
I+ P V + + L H KAG Y M++R+++ +L + + AQ + ++EG
Sbjct 63 INRPRVFQWLLRIEPDLSH--FKAGTYRFTPQMTVREMLKLLESGKEAQFP-LRLVEGMR 119
Query 140 FKQLIENLKKDPLVTKTVVNLPYSEMLKALDIPYQHPE---GLFEPNTYFFAKGETDKKI 196
++ L++ P + T+ + Y+ + +AL++ ++PE G F P+T+ + TD +
Sbjct 120 LSDYLKQLREAPYIKHTLSDDKYATVAQALEL--ENPEWIEGWFWPDTWMYTANTTDVAL 177
Query 197 LTDLYRYQMKTLNEEWQKRARDLPYKNKYEALIMASIIEKETSIDSELEQVSGVFVRRLR 256
L ++ +K ++ W+ RA LPYK+K + + MASIIEKET++ SE ++V+ VF+ RLR
Sbjct 178 LKRAHKKMVKAVDSAWEGRADGLPYKDKNQLVTMASIIEKETAVASERDKVASVFINRLR 237
Query 257 LGMRLQTDPTVIYGMGDRYQGKISREDLRTATAYNTYTMAGLPPTPIALPGKKAIAAAMH 316
+GMRLQTDPTVIYGMG+RY GK+SR DL T TAYNTYT+ GLPP IA PG ++ AA H
Sbjct 238 IGMRLQTDPTVIYGMGERYNGKLSRADLETPTAYNTYTITGLPPGAIATPGADSLKAAAH 297
Query 317 PDQSDNIYFVATGNGGHKFSANLQDHNQAVQQYLSVLRSKN 357
P ++ +YFVA G GGH F+ NL HN++VQ YL VL+ KN
Sbjct 298 PAKTPYLYFVADGKGGHTFNTNLASHNKSVQDYLKVLKEKN 338
Score = 17.7 bits (34), Expect = 2.9
Identities = 5/13 (38%), Positives = 7/13 (54%), Gaps = 0/13 (0%)
Query 22 ESWFKTNKWLMAA 34
E WF + W+ A
Sbjct 158 EGWFWPDTWMYTA 170
>P44720 Endolytic murein transglycosylase [Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd)]
Length=347
Score = 232 bits (591), Expect = 2e-77
Identities = 132/346 (38%), Positives = 208/346 (60%), Gaps = 23/346 (7%)
Query 29 KWLMAALVLLCVVGIVLWANLFK-----PYPIDGKR-QMLAIAPGDTYTRFIDRMEK--- 79
K+L+A L+L+ ++ V + +K P++ + ++L I G T ++ E+
Sbjct 3 KFLIAILLLILILAGVASFSYYKMTEFVKTPVNVQADELLTIERGTTSSKLATLFEQEKL 62
Query 80 --DGKISLPIVLKIYQKFLIHDSLKAGVYEIRQGMSIRQVMVMLSNAENAQMNRILVIEG 137
DGK+ LP +LK+ + + +KAG Y + +++ ++ +L++ + Q N + IEG
Sbjct 63 IADGKL-LPYLLKLKPEL---NKIKAGTYSLENVKTVQDLLDLLNSGKEVQFN-VKWIEG 117
Query 138 TTFKQLIENLKKDPLVTKTVVNLPYSEMLKALDIP-------YQHPEGLFEPNTYFFAKG 190
TFK ++L+ P + +T+ + E+ LD+P ++ EG P+TY +
Sbjct 118 KTFKDWRKDLENAPHLVQTLKDKSNEEIFALLDLPDIGQNLELKNVEGWLYPDTYNYTPK 177
Query 191 ETDKKILTDLYRYQMKTLNEEWQKRARDLPYKNKYEALIMASIIEKETSIDSELEQVSGV 250
TD ++L K LN+ W +R DLP N YE LI+ASI+EKET I +E +V+ V
Sbjct 178 STDLELLKRSAERMKKALNKAWNERDEDLPLANPYEMLILASIVEKETGIANERAKVASV 237
Query 251 FVRRLRLGMRLQTDPTVIYGMGDRYQGKISREDLRTATAYNTYTMAGLPPTPIALPGKKA 310
F+ RL+ M+LQTDPTVIYGMG+ Y G I ++DL T T YNTY + GLPPTPIA+P + +
Sbjct 238 FINRLKAKMKLQTDPTVIYGMGENYNGNIRKKDLETKTPYNTYVIDGLPPTPIAMPSESS 297
Query 311 IAAAMHPDQSDNIYFVATGNGGHKFSANLQDHNQAVQQYLSVLRSK 356
+ A +P+++D YFVA G+GGHKF+ NL +HN+AVQ+YL RS+
Sbjct 298 LQAVANPEKTDFYYFVADGSGGHKFTRNLNEHNKAVQEYLRWYRSQ 343
>O34758 Endolytic murein transglycosylase [Bacillus subtilis (strain
168)]
Length=360
Score = 141 bits (356), Expect = 1e-42
Identities = 101/360 (28%), Positives = 179/360 (50%), Gaps = 28/360 (8%)
Query 20 QTESWFKTNKWLMAALVLLCVV--GIVLWA-NLFKPYPIDGKRQM-LAIAPGDTYTRFID 75
Q +S+F + +++++V+L ++ G L+ +L +P D K + + I G + +
Sbjct 6 QKKSFFNKKRIILSSIVVLFLIIGGAFLYGKSLLEPVEKDSKTTVNINIPSGSSVSAIAS 65
Query 76 RMEKDGKISLPIVLKIYQKFLIHDSLKAGVYEIRQGMSIRQVMVMLSNAENAQMNRILVI 135
++K+ I + Y K+ +AG Y + +GM + ++ L++ +I V
Sbjct 66 ILKKNDVIKSEKAFQYYVKYKGASGFQAGFYHLNKGMDLDAIIQKLTSGATGYAFQITVT 125
Query 136 EGTTF---------------KQLIENLKKDPLVTKTVVNLPYSEMLKALDIPYQHP-EGL 179
EG KQ+I L + + + P + + +HP EG
Sbjct 126 EGAQLTQIAAAIADETKYSKKQVIAKLDDETFINQLKKEFPDTVTNDVFNKNIKHPLEGY 185
Query 180 FEPNTYFFAKGETDKKILTDLYRYQMKTLNEEWQKRARDLPYKNK---YEALIMASIIEK 236
P TY F +T L D+ + +K N + ++ KNK ++ L MAS+IE+
Sbjct 186 LFPATYPFNDPDTS---LEDIIKAMIKQTNSYVETYKSEMK-KNKVSVHKLLTMASLIEE 241
Query 237 ETSIDSELEQVSGVFVRRLRLGMRLQTDPTVIYGMGDRYQGKISREDLRTATAYNTYTMA 296
E + ++ +++ VF RL+ M LQTDPTV+Y G +++ ++ +DL + YNTY
Sbjct 242 EATEKADRHKIASVFYNRLKKKMPLQTDPTVLYAAG-KHKDRVLYKDLEIDSPYNTYKNT 300
Query 297 GLPPTPIALPGKKAIAAAMHPDQSDNIYFVATGNGGHKFSANLQDHNQAVQQYLSVLRSK 356
GL P PIA G + AA+HPD++D +YF+A NG F+ L++HN+A ++Y+S K
Sbjct 301 GLTPGPIANAGMSSWEAALHPDKTDYLYFLAKSNGEVVFTKTLKEHNKAKEKYISSKNEK 360
>A0A0H2ZLQ1 Endolytic murein transglycosylase [Streptococcus pneumoniae
serotype 2 (strain D39 / NCTC 7466)]
Length=551
Score = 97.4 bits (241), Expect = 6e-26
Identities = 90/385 (23%), Positives = 168/385 (44%), Gaps = 51/385 (13%)
Query 7 QPTKPKMKKKPQPQTESWFKTNKWLMAALVLLCVV------GIVLWANLFKPYPIDGKRQ 60
+P KPK +KK + ++++ LV L ++ G + P + K+
Sbjct 174 KPAKPKKEKKSHVKA--------FVISFLVFLALLSAGGYFGYQYVLDSLLPIDANSKKY 225
Query 61 M-LAIAPGDTYTRFIDRMEKDGKISLPIVLKIYQKFLIHDSLKAGVYEIRQGMSIRQVMV 119
+ + I G +EK G + ++ Y K+ + LKAG Y +++ MS ++
Sbjct 226 VTVGIPEGSNVQEIGTTLEKAGLVKHGLIFSFYAKYKNYTDLKAGYYNLQKSMSTEDLLK 285
Query 120 MLSNA-----ENAQMNRILVIEGTTFKQLIENL--------------------KKDPLVT 154
L + + + + EG T Q+ + + + + ++
Sbjct 286 ELQKGGTDEPQEPVLATLTIPEGYTLDQIAQTVGQLQGDFKESLTAEAFLAKVQDETFIS 345
Query 155 KTVVNLP-YSEMLKALDIPYQHP-EGLFEPNTYFFAKGETDKKILTDLYRYQMKTLNEEW 212
+ V P E L D ++ EG P TY + T + ++ ++ K L+ +
Sbjct 346 QAVAKYPTLLESLPVKDSGARYRLEGYLFPATYSIKESTTIESLIDEMLAAMDKNLSPYY 405
Query 213 QK-RARDLPYKNKYEALIMASIIEKETSIDSELEQVSGVFVRRLRLGMRLQTDPTVIYGM 271
++++L E L +AS++EKE + + + ++GVF RL M LQ++ ++Y
Sbjct 406 STIKSKNLTVN---ELLTIASLVEKEGAKTEDRKLIAGVFYNRLNRDMPLQSNIAILYAQ 462
Query 272 GDRYQGKISREDLRTAT----AYNTYTMAGLPPTPIALPGKKAIAAAMHPDQSDNIYFVA 327
G Q ED+ T YN Y GL P P+ P AI ++++ +SDN+YFVA
Sbjct 463 GKLGQNISLAEDVAIDTNIDSPYNVYKNVGLMPGPVDSPSLDAIESSINQTKSDNLYFVA 522
Query 328 TGNGGHKFSANLQ-DHNQAVQQYLS 351
G + AN Q DH++ V ++++
Sbjct 523 DVTEGKVYYANNQEDHDRNVAEHVN 547
Score = 20.0 bits (40), Expect = 0.57
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 0/38 (0%)
Query 282 EDLRTATAYNTYTMAGLPPTPIALPGKKAIAAAMHPDQ 319
E +R A T+ G+P +P ++ HP Q
Sbjct 60 EIMRKAPTVPTHPSQGVPASPADEIQRETPGVPSHPSQ 97
>Q8CYJ8 Endolytic murein transglycosylase [Streptococcus pneumoniae
(strain ATCC BAA-255 / R6)]
Length=551
Score = 96.7 bits (239), Expect = 1e-25
Identities = 90/385 (23%), Positives = 168/385 (44%), Gaps = 51/385 (13%)
Query 7 QPTKPKMKKKPQPQTESWFKTNKWLMAALVLLCVV------GIVLWANLFKPYPIDGKRQ 60
+P KPK +KK + ++++ LV L ++ G + P + K+
Sbjct 174 KPAKPKKEKKSHVKA--------FVISFLVFLALLSAGGYFGYQYVLDSLLPIDANSKKY 225
Query 61 M-LAIAPGDTYTRFIDRMEKDGKISLPIVLKIYQKFLIHDSLKAGVYEIRQGMSIRQVMV 119
+ + I G +EK G + ++ Y K+ + LKAG Y +++ MS ++
Sbjct 226 VTVGIPEGSNVQEIGTTLEKAGLVKHGLIFSFYAKYKNYTDLKAGYYNLQKSMSTEDLLK 285
Query 120 MLSNA-----ENAQMNRILVIEGTTFKQLIENL--------------------KKDPLVT 154
L + + + + EG T Q+ + + + + ++
Sbjct 286 ELQKGGTDEPQEPVLATLTIPEGYTLDQIAQTVGQLQGDFKESLTAEAFLAKVQDETFIS 345
Query 155 KTVVNLP-YSEMLKALDIPYQHP-EGLFEPNTYFFAKGETDKKILTDLYRYQMKTLNEEW 212
+ V P E L D ++ EG P TY + T + ++ ++ K L+ +
Sbjct 346 QAVAKYPTLLESLPVKDSGARYRLEGYLFPATYSIKESTTIESLIDEMLAAMDKNLSLYY 405
Query 213 QK-RARDLPYKNKYEALIMASIIEKETSIDSELEQVSGVFVRRLRLGMRLQTDPTVIYGM 271
++++L E L +AS++EKE + + + ++GVF RL M LQ++ ++Y
Sbjct 406 STIKSKNLTVN---ELLTIASLVEKEGAKTEDRKLIAGVFYNRLNRDMPLQSNIAILYAQ 462
Query 272 GDRYQGKISREDLRTAT----AYNTYTMAGLPPTPIALPGKKAIAAAMHPDQSDNIYFVA 327
G Q ED+ T YN Y GL P P+ P AI ++++ +SDN+YFVA
Sbjct 463 GKLGQNISLAEDVAIDTNIDSPYNVYKNVGLMPGPVDSPSLDAIESSINQTKSDNLYFVA 522
Query 328 TGNGGHKFSANLQ-DHNQAVQQYLS 351
G + AN Q DH++ V ++++
Sbjct 523 DVTEGKVYYANNQEDHDRNVAEHVN 547
Score = 20.0 bits (40), Expect = 0.57
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 0/38 (0%)
Query 282 EDLRTATAYNTYTMAGLPPTPIALPGKKAIAAAMHPDQ 319
E +R A T+ G+P +P ++ HP Q
Sbjct 60 EIMRKAPTVPTHPSQGVPASPADEIQRETPGVPSHPSQ 97
Lambda K H a alpha
0.321 0.136 0.399 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 612724
Database: 07712a0eeac01f606bfab82b4c222d6a.SwissProt.fasta
Posted date: May 8, 2024 5:35 AM
Number of letters in database: 2,149
Number of sequences in database: 5
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
