BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 664fbd45c8d68a5f8da3295e7356a3de.SwissProt.fasta
13 sequences; 3,873 total letters
Query= ACIAD2643
Length=311
Score E
Sequences producing significant alignments: (Bits) Value
O34416 Uncharacterized transporter YoaV [Bacillus subtilis (strai... 84.7 2e-22
P0AA71 Uncharacterized inner membrane transporter YedA [Escherich... 83.6 7e-22
P0AA72 Uncharacterized inner membrane transporter YedA [Escherich... 83.6 7e-22
P0AA70 Uncharacterized inner membrane transporter YedA [Escherich... 83.6 7e-22
P31125 Probable amino-acid metabolite efflux pump [Escherichia co... 78.6 4e-20
O29973 Uncharacterized transporter AF_0266 [Archaeoglobus fulgidu... 73.9 1e-18
P96680 Uncharacterized transporter YdfC [Bacillus subtilis (strai... 71.6 1e-17
P42194 Protein PecM [Dickeya dadantii (strain 3937)] 62.4 1e-14
F8JJ22 Probable terminal-alkyne amino-acid exporter [Streptantibi... 56.2 2e-12
O28739 Uncharacterized transporter AF_1533 [Archaeoglobus fulgidu... 41.6 9e-08
Q9KVF1 Uncharacterized transporter VC_0195 [Vibrio cholerae serot... 41.6 1e-07
P27844 Protein RarD [Escherichia coli (strain K12)] 40.8 2e-07
P42243 Uncharacterized transporter YcbK [Bacillus subtilis (strai... 35.4 1e-05
>O34416 Uncharacterized transporter YoaV [Bacillus subtilis (strain
168)]
Length=292
Score = 84.7 bits (208), Expect = 2e-22
Identities = 70/280 (25%), Positives = 130/280 (46%), Gaps = 4/280 (1%)
Query 11 IMLTYIVLVFIWASTPLAIVWSVSDLNVLWAMVLRFFIALPLAVIILFVLRVKFPTDKIA 70
+ML I + IW T +A+ + D+ L LR FI +ILF+ R K K
Sbjct 4 VMLGIISVTLIWGYTWVAMKVGIHDIPPLLFSGLRLFIGAVPLFLILFIQRKKLSIQKEH 63
Query 71 VHSYIAGSFSL-IGSQVFTYIATQYLSSGIIALMFGLAPIIAGLIGCFAFGQQLNRLQWL 129
+ SYI S + +G Q++ SG +++ PI +I F+ +++N + +
Sbjct 64 LKSYIIMSLLMGLGYMGILTYGMQFVDSGKTSVLVYTMPIFVTVISHFSLNEKMNVYKTM 123
Query 130 GMAIAITGLAVICVGGASQHIHPLGI-GLMLISVFTYCCSIYWV-KKVNADVQPIAQATG 187
G+ + GL I G +I + G + + V I V K+ I
Sbjct 124 GLVCGLFGLLFI-FGKEMLNIDQSALFGELCVLVAALSWGIANVFSKLQFKHIDIIHMNA 182
Query 188 SILISTLVSLCLLPFIWAHAPTHIPEIKSLMALLYTTIMASLIAMFCYFKLVKNIQPTTL 247
L+ V L + FI+ P+ +++ +LL+ ++++ +F ++ IQ +
Sbjct 183 WHLMMGAVMLLVFSFIFEAVPSAEWTYQAVWSLLFNGLLSTGFTFVVWFWVLNQIQASKA 242
Query 248 SLTNVMTPILALVIGALFNHERISLMVVIGAMIILSGLFL 287
S+ + P+LAL G L HE+I++ +++GA++I G+F+
Sbjct 243 SMALMFVPVLALFFGWLQLHEQITINIILGALLICCGIFM 282
>P0AA71 Uncharacterized inner membrane transporter YedA [Escherichia
coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)]
Length=306
Score = 83.6 bits (205), Expect = 7e-22
Identities = 67/282 (24%), Positives = 130/282 (46%), Gaps = 18/282 (6%)
Query 18 LVFIWASTPLAIVWSVSDLNVLWAMVLRFFIALPLAVIILFVLRVKFPTDKIAVHSYIAG 77
L IW ST I V L +RF A L + L + K P + +++ + G
Sbjct 16 LYIIWGSTYFVIRIGVESWPPLMMAGVRFLAAGILLLAFLLLRGHKLPPLRPLLNAALIG 75
Query 78 SFSL-IGSQVFTYIATQYLSSGIIALMFGLAPIIAGLIGCFA--FGQQLNRLQWLGMAIA 134
L +G+ + T Q + SGI A++ P+ CF+ FG + +L+W+G+AI
Sbjct 76 LLLLAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTL---CFSRLFGIKTRKLEWVGIAIG 132
Query 135 ITGLAVICVGGASQHIHPLGIGLMLISVFTYCCSIYWVKKVNADVQPIAQATGSI-LIST 193
+ G+ ++ GG +P G L+LI ++ + ++ P+ G+I +++
Sbjct 133 LAGIIMLNSGGNLSG-NPWGAILILIGSISWAFGSVYGSRITL---PVGMMAGAIEMLAA 188
Query 194 LVSLCLLPFIWAHAPTHIPEIKSLMALLYTTIMASLIAMFCYFKLVKNIQPTTLSLTNVM 253
V L + I T +P + +A+ Y + S+IA+ Y L++N+ P + +
Sbjct 189 GVVLMIASMIAGEKLTALPSLSGFLAVGYLALFGSIIAINAYMYLIRNVSPALATSYAYV 248
Query 254 TPILALVIGALFNHERISL-------MVVIGAMIILSGLFLY 288
P++A+++G E +S ++V +++ G +L+
Sbjct 249 NPVVAVLLGTGLGGETLSKIEWLALGVIVFAVVLVTLGKYLF 290
>P0AA72 Uncharacterized inner membrane transporter YedA [Escherichia
coli O157:H7]
Length=306
Score = 83.6 bits (205), Expect = 7e-22
Identities = 67/282 (24%), Positives = 130/282 (46%), Gaps = 18/282 (6%)
Query 18 LVFIWASTPLAIVWSVSDLNVLWAMVLRFFIALPLAVIILFVLRVKFPTDKIAVHSYIAG 77
L IW ST I V L +RF A L + L + K P + +++ + G
Sbjct 16 LYIIWGSTYFVIRIGVESWPPLMMAGVRFLAAGILLLAFLLLRGHKLPPLRPLLNAALIG 75
Query 78 SFSL-IGSQVFTYIATQYLSSGIIALMFGLAPIIAGLIGCFA--FGQQLNRLQWLGMAIA 134
L +G+ + T Q + SGI A++ P+ CF+ FG + +L+W+G+AI
Sbjct 76 LLLLAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTL---CFSRLFGIKTRKLEWVGIAIG 132
Query 135 ITGLAVICVGGASQHIHPLGIGLMLISVFTYCCSIYWVKKVNADVQPIAQATGSI-LIST 193
+ G+ ++ GG +P G L+LI ++ + ++ P+ G+I +++
Sbjct 133 LAGIIMLNSGGNLSG-NPWGAILILIGSISWAFGSVYGSRITL---PVGMMAGAIEMLAA 188
Query 194 LVSLCLLPFIWAHAPTHIPEIKSLMALLYTTIMASLIAMFCYFKLVKNIQPTTLSLTNVM 253
V L + I T +P + +A+ Y + S+IA+ Y L++N+ P + +
Sbjct 189 GVVLMIASMIAGEKLTALPSLSGFLAVGYLALFGSIIAINAYMYLIRNVSPALATSYAYV 248
Query 254 TPILALVIGALFNHERISL-------MVVIGAMIILSGLFLY 288
P++A+++G E +S ++V +++ G +L+
Sbjct 249 NPVVAVLLGTGLGGETLSKIEWLALGVIVFAVVLVTLGKYLF 290
>P0AA70 Uncharacterized inner membrane transporter YedA [Escherichia
coli (strain K12)]
Length=306
Score = 83.6 bits (205), Expect = 7e-22
Identities = 67/282 (24%), Positives = 130/282 (46%), Gaps = 18/282 (6%)
Query 18 LVFIWASTPLAIVWSVSDLNVLWAMVLRFFIALPLAVIILFVLRVKFPTDKIAVHSYIAG 77
L IW ST I V L +RF A L + L + K P + +++ + G
Sbjct 16 LYIIWGSTYFVIRIGVESWPPLMMAGVRFLAAGILLLAFLLLRGHKLPPLRPLLNAALIG 75
Query 78 SFSL-IGSQVFTYIATQYLSSGIIALMFGLAPIIAGLIGCFA--FGQQLNRLQWLGMAIA 134
L +G+ + T Q + SGI A++ P+ CF+ FG + +L+W+G+AI
Sbjct 76 LLLLAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTL---CFSRLFGIKTRKLEWVGIAIG 132
Query 135 ITGLAVICVGGASQHIHPLGIGLMLISVFTYCCSIYWVKKVNADVQPIAQATGSI-LIST 193
+ G+ ++ GG +P G L+LI ++ + ++ P+ G+I +++
Sbjct 133 LAGIIMLNSGGNLSG-NPWGAILILIGSISWAFGSVYGSRITL---PVGMMAGAIEMLAA 188
Query 194 LVSLCLLPFIWAHAPTHIPEIKSLMALLYTTIMASLIAMFCYFKLVKNIQPTTLSLTNVM 253
V L + I T +P + +A+ Y + S+IA+ Y L++N+ P + +
Sbjct 189 GVVLMIASMIAGEKLTALPSLSGFLAVGYLALFGSIIAINAYMYLIRNVSPALATSYAYV 248
Query 254 TPILALVIGALFNHERISL-------MVVIGAMIILSGLFLY 288
P++A+++G E +S ++V +++ G +L+
Sbjct 249 NPVVAVLLGTGLGGETLSKIEWLALGVIVFAVVLVTLGKYLF 290
>P31125 Probable amino-acid metabolite efflux pump [Escherichia
coli (strain K12)]
Length=299
Score = 78.6 bits (192), Expect = 4e-20
Identities = 65/289 (22%), Positives = 142/289 (49%), Gaps = 31/289 (11%)
Query 16 IVLVFIWASTPLAIVWSVSDLNVLWAMVLRFF-IALPLAVIILFVLRVKFPTDKIAVHSY 74
+++V +W + I + ++ L LRF +A P I FV R K P + + +
Sbjct 10 LLVVVVWGLNFVVIKVGLHNMPPLMLAGLRFMLVAFPA---IFFVARPKVPLNLLLGYG- 65
Query 75 IAGSFSLIGSQVFTYIATQY-LSSGIIALMFGLAPIIAGLIGCFAFGQQLNRLQWLGMAI 133
+ SF+ F + A + + +G+ +L+ ++G F FG++L+ Q G+A+
Sbjct 66 LTISFAQFA---FLFCAINFGMPAGLASLVLQAQAFFTIMLGAFTFGERLHGKQLAGIAL 122
Query 134 AITGLAVICVGGAS-QHIHPLGIGLMLISVFTYCCSIYWVKKVNADVQPIAQATGSILIS 192
AI G+ V+ + QH+ LG L L + F++ C + KK+ ++ +T ++S
Sbjct 123 AIFGVLVLIEDSLNGQHVAMLGFMLTLAAAFSWACGNIFNKKI------MSHSTRPAVMS 176
Query 193 TLVSLCLLPFI--------------WAHAPTHIPEIKSLMALLYTTIMASLIAMFCYFKL 238
++ L+P I H+ I ++ ++++L+Y +A+++ + L
Sbjct 177 LVIWSALIPIIPFFVASLILDGSATMIHSLVTI-DMTTILSLMYLAFVATIVGYGIWGTL 235
Query 239 VKNIQPTTLSLTNVMTPILALVIGALFNHERISLMVVIGAMIILSGLFL 287
+ + ++ +++ P++ L AL ER++ + +GA++I++GL++
Sbjct 236 LGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMTGLYI 284
Score = 27.7 bits (60), Expect = 0.003
Identities = 21/105 (20%), Positives = 39/105 (37%), Gaps = 12/105 (11%)
Query 52 LAVIILFVLRVKFPTDKIAVHSYIAGSFSLIGSQVFTYIATQYLSSGIIALMFG------ 105
+ +I FV + +HS + + I S ++ + GI + G
Sbjct 184 IPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLAFVATIVGYGIWGTLLGRYETWR 243
Query 106 ------LAPIIAGLIGCFAFGQQLNRLQWLGMAIAITGLAVICVG 144
L P++ ++L LQ+LG + +TGL + G
Sbjct 244 VAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMTGLYINVFG 288
>O29973 Uncharacterized transporter AF_0266 [Archaeoglobus fulgidus
(strain ATCC 49558 / DSM 4304 / JCM 9628 / NBRC 100126
/ VC-16)]
Length=276
Score = 73.9 bits (180), Expect = 1e-18
Identities = 64/280 (23%), Positives = 134/280 (48%), Gaps = 13/280 (5%)
Query 12 MLTYIVL---VFIWASTPLAIVWSVSDLNVLWAMVLRFFIALPL-AVIILFVLRVKFPTD 67
M +IVL V W AI +SV L+ + LRF IA L AVII+ R+K+
Sbjct 1 MKKWIVLALTVTFWGLAFTAIKYSVRFLSPIAIASLRFAIANTLFAVIIILGKRIKW--- 57
Query 68 KIAVHSYIAGSFSLIGSQVFTYIATQYLSSGIIALMFGLAPIIAGLIGCFAFGQQLNRLQ 127
K + G F + VF + Y+SSG+ +++ LAPI ++ +++ +
Sbjct 58 KDLPKVFALGIFGVSVYHVFLNLGEVYISSGVASVVISLAPIFVLILSAIFLRERITYSK 117
Query 128 WLGMAIAITGLAVICVGGASQHIHPLGIGLMLISVFTYCCSIYWVKKVNADVQPIAQATG 187
+G+ IA G+ VI + + GI L+++S + K + + PI +
Sbjct 118 VVGIIIAFLGVVVI---SEPSYANIYGIALVMVSTVAAAIYTTFGKSLLSKYNPITLTSN 174
Query 188 SILISTLVSLCLLPFIWAHAPTHIPEIKSLMALLYTTIMASLIAMFCYFKLVKNIQPTTL 247
++++ S+ L PF+ + ++ + ++++ I ++ ++ ++ + +
Sbjct 175 AMVLG---SIPLYPFLPDSIRSLGGDLNLIGSIVFLGIFSTFFGYLGWYYFLEKEEASRA 231
Query 248 SLTNVMTPILALVIGALFNHERISLMVVIGAMIILSGLFL 287
S+ + P+++L+ G + E ++L V G+ ++L G+++
Sbjct 232 SVFLLAIPVVSLLAGNILLAEPLTLRTVAGSGLVLLGIYI 271
>P96680 Uncharacterized transporter YdfC [Bacillus subtilis (strain
168)]
Length=306
Score = 71.6 bits (174), Expect = 1e-17
Identities = 60/302 (20%), Positives = 135/302 (45%), Gaps = 6/302 (2%)
Query 11 IMLTYIVLVFIWASTPLAIVWSVSDLNVLWAMVLRFFIALPLAVIILFVLRVKFPTDKIA 70
IM+++ +++ +WAS I + + R I ++ + +++ P K
Sbjct 8 IMISHSLMIGLWASAFPGIRAGLEGYTPEHLALFRLLIGSMALLLFAVLTQMRLPDLKDI 67
Query 71 VHSYIAGSFSLIGSQVFTYIATQYLSSGIIALMFGLAPIIAGLIGCFAFGQQLNRLQWLG 130
++ G + I + +S+G+ +L+ API + ++ + + +WLG
Sbjct 68 PAIFLLGFLGFAFYHILLNIGEKTVSAGVASLLVTTAPIFSAMLSRLFYKEHFGFTKWLG 127
Query 131 MAIAITGLAVICVGGASQHIHPLGIGLMLISVFTYCCSIYWVKKVN--ADVQPIAQATGS 188
I++ G+ +I G GI ++L++ F+ SIY+V + I T +
Sbjct 128 SMISLLGVLLIAFGAGDFTYSMSGILVILLAAFSE--SIYFVFQARYIKKYGFIPFVTFT 185
Query 189 ILISTLVSLCLLPFIWAHAPTHIPEIKSLMALLYTTIMASLIAMFCYFKLVKNIQPTTLS 248
I T+ L LP + I + ++++Y ++ ++I F + + + +
Sbjct 186 IWGGTIPMLVFLPGLGEEMMN--ASISATLSIVYLGLLPTVIPYFALAYVTSFVGASEAT 243
Query 249 LTNVMTPILALVIGALFNHERISLMVVIGAMIILSGLFLYFYRDIQANRRFSQHMKQQLR 308
L+ +TP LAL+I L+ E +L+ ++G ++ + G+ + + + N+ F H +
Sbjct 244 LSLYVTPALALIISWLWIGEIPTLLSLLGGVVTVGGVCFTYLKVNKMNKIFITHFSAKRV 303
Query 309 QK 310
+K
Sbjct 304 KK 305
>P42194 Protein PecM [Dickeya dadantii (strain 3937)]
Length=297
Score = 62.4 bits (150), Expect = 1e-14
Identities = 62/271 (23%), Positives = 117/271 (43%), Gaps = 14/271 (5%)
Query 21 IWASTPLAIVWSVSDLNVLWAMVLRFFIALPLAVIILFVLRVKFPTDKIAVHSYIAGSFS 80
+W +T + L A ++R ALP +I+ +L P ++ G+ +
Sbjct 13 VWGTTYFVTTQFLPADKPLLAALIR---ALPAGIIL--ILGKNLPPVGWLWRLFVLGALN 67
Query 81 LIGSQVFTYIATQYLSSGIIALMFGLAPIIAGLIGCFAFGQQLNRLQWLGMAIAITGLAV 140
+ V + A L G++AL+ L P+I L+ Q + + Q + G+ V
Sbjct 68 IGVFFVMLFFAAYRLPGGVVALVGSLQPLIVILLSFLLLTQPVLKKQMVAAVAGGIGI-V 126
Query 141 ICVGGASQHIHPLGIGLMLISVFTYCCSIYWVKKVNADV-QPIAQATGSILISTLVSLCL 199
+ + ++P G+ ++ + + KK + TG L L +
Sbjct 127 LLISLPKAPLNPAGLVASALATMSMASGLVLTKKWGRPAGMTMLTFTGWQLFCG--GLVI 184
Query 200 LPFIWAHAPTHIPEIKSLMAL---LYTTIMASLIAMFCYFKLVKNIQPTTLSLTNVMTPI 256
LP P +P++ +L L LY I SL+A F +F ++ P +SL ++P+
Sbjct 185 LPVQMLTEP--LPDLVTLTNLAGYLYLAIPGSLLAYFMWFSGLEANSPVIMSLLGFLSPL 242
Query 257 LALVIGALFNHERISLMVVIGAMIILSGLFL 287
+AL++G LF + +S ++G + I S L +
Sbjct 243 VALLLGFLFLQQGLSGAQLVGVVFIFSALII 273
Score = 26.2 bits (56), Expect = 0.009
Identities = 19/74 (26%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query 69 IAVHSYIAGSFSLIGSQVFTYIATQYLSSGIIALMFG-LAPIIAGLIGCFAFGQQLNRLQ 127
+A + Y+A SL+ F + + +S +I + G L+P++A L+G Q L+ Q
Sbjct 203 LAGYLYLAIPGSLLA--YFMWFSGLEANSPVIMSLLGFLSPLVALLLGFLFLQQGLSGAQ 260
Query 128 WLGMAIAITGLAVI 141
+G+ + L ++
Sbjct 261 LVGVVFIFSALIIV 274
>F8JJ22 Probable terminal-alkyne amino-acid exporter [Streptantibioticus
cattleyicolor (strain ATCC 35852 / DSM 46488 / JCM
4925 / NBRC 14057 / NRRL 8057)]
Length=297
Score = 56.2 bits (134), Expect = 2e-12
Identities = 60/288 (21%), Positives = 120/288 (42%), Gaps = 9/288 (3%)
Query 16 IVLVFIWASTPLAIVWSVSDLNVLWAMVLRFFIALPLAVIILFVLRVKFPTDKIAVHSYI 75
++ V WAS AI + V + R +A I L V+ P + +
Sbjct 11 VLTVVTWASAFPAIRVGLDGYGVAGLSLSRLTVASVALAIAAGPLGVRRPRARDLPMIAL 70
Query 76 AGSFSLIGSQVFTYIATQYLSSGIIALMFGLAPIIAGLIGCFAFGQQLNRLQWLGMAIAI 135
G+ + QV ++ +G +L+ +AP+ + L+ G+++ Q G A+AI
Sbjct 71 CGATGMSAYQVLLNWGEVHVPAGTASLLIAIAPVFSVLLAAVFLGERMTWAQIAGSAVAI 130
Query 136 TGLAVICVGGASQHIHPLGIGLMLISVFTYCCSIYWVKKVNADVQPIAQATGSILISTLV 195
+G AVI V G + ++L + + K + A + A ++ T+
Sbjct 131 SGAAVIAVAGGHAR-YTTSAWVVLAAAVVQGVYHFATKPLLARYTGLEVACYAMWAGTVF 189
Query 196 SLCLLPFI---WAHAPTHIPEIKSLMALLYTTIMASLIAMFCYFKLVKNIQPTTLSLTNV 252
L LLP + +A AP + + + +Y ++ S I + V + + + +
Sbjct 190 LLPLLPAMVHGFATAP-----VAATASTVYLGLLPSAIGFVSWGYAVARLSVASSTASLY 244
Query 253 MTPILALVIGALFNHERISLMVVIGAMIILSGLFLYFYRDIQANRRFS 300
+ P +ALV+ ++ E + ++G + ++G+ L R + R S
Sbjct 245 LVPPVALVVAFVWLGEVPPPLALVGGALGIAGVMLINRRTLGRRREAS 292
>O28739 Uncharacterized transporter AF_1533 [Archaeoglobus fulgidus
(strain ATCC 49558 / DSM 4304 / JCM 9628 / NBRC 100126
/ VC-16)]
Length=278
Score = 41.6 bits (96), Expect = 9e-08
Identities = 64/290 (22%), Positives = 120/290 (41%), Gaps = 22/290 (8%)
Query 12 MLTYIVLVFIWASTPLAIVWSVSDLNVLWAMVLRFFIA----LPLAVIILFVLRVKFPTD 67
+L + WA +A V D++ A R A LPLA+ + + T
Sbjct 4 ILMSLTAAICWAFNGIAYRKGVKDVSAFTANFHRTLFATVYFLPLALRDFPGVVIDLQTA 63
Query 68 KIAVHSYIAGSFSLIGSQVFTYIATQYLSSGIIALMFGLA-PIIAGLIGCFAFGQQLNRL 126
+ V S + + IG +Y A+ S IAL P+ L+ +G +L+ L
Sbjct 64 LVLVISAMLSFY--IGD--LSYFASLKRSPVSIALPASSTYPVYVVLLSTVIYGAELS-L 118
Query 127 QWLGMAIAITGLAVICVGGASQHIHPLGIGLMLISVFTYCCSIYWVKKVNADVQPIAQAT 186
L AI + +AV + G+ + G+ L++ F++ +I + + D P++
Sbjct 119 NALISAILVF-VAVYIIYGSGEKGETSGLFYALLAAFSWALAILTLDFLT-DRLPVSIVA 176
Query 187 GSILISTLVSLCLLPFIWAHAPTHIPEIKSLMALLYTTIMAS--LIAMFCYFKLVKNIQP 244
+ L+ L LL F E+ + + L + ++ L+ + + +K
Sbjct 177 ---FVRLLLCLILLSFT-----AKKDELSTEIRLFFRSVRGIFLLLGIMLFITAIKVSSS 228
Query 245 TTLSLTNVMTPILALVIGALFNHERISLMVVIGAMIILSGLFLYFYRDIQ 294
+ + +P+ A + GA+F ERIS +V G +I+ + L +Q
Sbjct 229 WNVVQPSSTSPVFAAIFGAIFLKERISFRLVAGIFVIILAILLLLLPPLQ 278
>Q9KVF1 Uncharacterized transporter VC_0195 [Vibrio cholerae serotype
O1 (strain ATCC 39315 / El Tor Inaba N16961)]
Length=302
Score = 41.6 bits (96), Expect = 1e-07
Identities = 46/200 (23%), Positives = 86/200 (43%), Gaps = 17/200 (9%)
Query 101 ALMFGLAPIIAGLIGCFAFGQQLNRLQWLGMAIAITGLAVICVGGASQHIHPLGIGLMLI 160
+L + + P++ L+G G++L +LQW +A+A G+ + V S I + + L
Sbjct 107 SLGYYINPLLNVLLGMLFLGERLRKLQWFAVALAAIGVGIQLVVFGSVPI----VAIALA 162
Query 161 SVFTYCCSIYWVKKVNADVQPIAQATGSILISTLVSL--CLLPFIW-AHAPTHIPEIKS- 216
+ F + + KK+ D Q TG + + TL L + IW A PT + +
Sbjct 163 TSFGFYGLLR--KKIQVDAQ-----TG-LFLETLFMLPAAAIYLIWLADTPTSDMALNTW 214
Query 217 -LMALLYTTIMASLIAMFCYFKLVKNIQPTTLSLTNVMTPILALVIGALFNHERISLMVV 275
L LL + + + + C+ ++ +TL + P L ++ L E +
Sbjct 215 QLNLLLVCAGVVTTLPLLCFTGAAARLKLSTLGFFQYIGPSLMFLLAVLVYGEAFTSDKA 274
Query 276 IGAMIILSGLFLYFYRDIQA 295
I I S L ++ ++A
Sbjct 275 ITFAFIWSALVIFSVDGLKA 294
Score = 20.4 bits (41), Expect = 0.61
Identities = 27/106 (25%), Positives = 49/106 (46%), Gaps = 21/106 (20%)
Query 6 PTKTNIMLTYIVLVFIWASTPLAIVWSVSDLNVLWAMVLRFFIALPLAVIILFVLRVKFP 65
P K ++L +LV L +WS++ ++L A L ++I PL ++L +L F
Sbjct 74 PRKFWLLLVTALLV---GGNWLIFIWSINANHMLDAS-LGYYIN-PLLNVLLGML---FL 125
Query 66 TDKIAVHSYIAGSFSLIGSQVFTYIATQYLSSGIIALMFGLAPIIA 111
+++ + A + + IG GI ++FG PI+A
Sbjct 126 GERLRKLQWFAVALAAIGV-------------GIQLVVFGSVPIVA 158
Score = 18.5 bits (36), Expect = 2.5
Identities = 10/34 (29%), Positives = 20/34 (59%), Gaps = 1/34 (3%)
Query 103 MFGLAPIIAGLIGCFAFGQQL-NRLQWLGMAIAI 135
M+G+API +G + + L +R+ W + +A+
Sbjct 23 MWGIAPIYFKALGAVSALEILSHRVVWSFVLLAV 56
>P27844 Protein RarD [Escherichia coli (strain K12)]
Length=296
Score = 40.8 bits (94), Expect = 2e-07
Identities = 46/206 (22%), Positives = 88/206 (43%), Gaps = 17/206 (8%)
Query 101 ALMFGLAPIIAGLIGCFAFGQQLNRLQWLGMAIAITGLAVICVGGASQHIHPLGIGLMLI 160
+L + + P++ ++G G++ R+QWL + +AI G+ V S I LG+
Sbjct 103 SLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFGSLPIIALGL----- 157
Query 161 SVFTYCCSIYWVKKVNADVQPIAQATGSILISTL----VSLCLLPFIWAHAPTHIPE-IK 215
F++ KK+ + Q TG +LI T+ V+ L I + +H+ +
Sbjct 158 -AFSFAFYGLVRKKIAVEAQ-----TG-MLIETMWLLPVAAIYLFAIADSSTSHMGQNPM 210
Query 216 SLMALLYTTIMASLIAMFCYFKLVKNIQPTTLSLTNVMTPILALVIGALFNHERISLMVV 275
SL LL + + + + C+ ++ +TL + P L ++ F E+ +
Sbjct 211 SLNLLLIAAGIVTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKM 270
Query 276 IGAMIILSGLFLYFYRDIQANRRFSQ 301
+ I L ++ I RR S+
Sbjct 271 VTFAFIWVALAIFVMDAIYTQRRTSK 296
Score = 22.7 bits (47), Expect = 0.11
Identities = 35/146 (24%), Positives = 66/146 (45%), Gaps = 17/146 (12%)
Query 18 LVFIWASTPLAIVWSVSDLNVLWAMVLRFFIALPLAVIILFVLRVKFPTDKIAVHSYIAG 77
L+FIWA V++ ++L A L +FI PL I+L ++ F ++ ++A
Sbjct 88 LLFIWA---------VNNHHMLEAS-LGYFIN-PLVNIVLGMI---FLGERFRRMQWLAV 133
Query 78 SFSLIG--SQVFTYIATQYLSSGIIALMFGLAPIIAGLIGCFAFGQQLNRLQWLGMAIAI 135
++ G Q++T+ + ++ G +A F ++ I A L WL AI
Sbjct 134 ILAICGVLVQLWTFGSLPIIALG-LAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAI 192
Query 136 TGLAVICVGGASQHIHPLGIGLMLIS 161
A+ + +P+ + L+LI+
Sbjct 193 YLFAIADSSTSHMGQNPMSLNLLLIA 218
Score = 21.6 bits (44), Expect = 0.26
Identities = 21/128 (16%), Positives = 43/128 (34%), Gaps = 39/128 (30%)
Query 202 FIWAHAPTHIPEI-----------KSLMALLYTTIMASLIAMFCYFK------------- 237
FIW AP + I + + + + ++ S+ + Y K
Sbjct 18 FIWGIAPAYFKLIYYVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFMLA 77
Query 238 ---------------LVKNIQPTTLSLTNVMTPILALVIGALFNHERISLMVVIGAMIIL 282
V N SL + P++ +V+G +F ER M + ++ +
Sbjct 78 VSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAI 137
Query 283 SGLFLYFY 290
G+ + +
Sbjct 138 CGVLVQLW 145
>P42243 Uncharacterized transporter YcbK [Bacillus subtilis (strain
168)]
Length=312
Score = 35.4 bits (80), Expect = 1e-05
Identities = 52/272 (19%), Positives = 118/272 (43%), Gaps = 22/272 (8%)
Query 42 MVLRFFIALPLAVIILFVLRVKFPTDKIAVHSYIA---GSFSLIGSQVFTYIATQYLSSG 98
++ R +A+PL +I + R P K + A G F S + +I ++S+
Sbjct 47 LLYRQLLAVPLFWLIFLIYRPPMPDGKKKGDLWKACGAGVFCFFLSPLLDFIGLNHVSAM 106
Query 99 IIALMFGLAPI-IAGLIGCFAFGQQLNRLQWLGMAIAITGLAVICVGGASQHI---HPLG 154
+ ++ P+ + G C ++++ +Q L +A+ + +GG + + + +G
Sbjct 107 VERILLMSYPLFVFGFTACR--DRKMSSIQDLFAVLAVMFGLFLALGGWNAELFQANMIG 164
Query 155 IGLMLISVFTYCCS-------IYWVKKVNADVQPIAQATGSILIST-LVSLCLLPFIWAH 206
+L+S Y ++ + + + + A ++++ T + S + A
Sbjct 165 AVFILLSSAVYAGYLVLSGHLVHQIGGIRLNAYGMTAAGAAMMLYTGIKSAAGMNTPMAA 224
Query 207 APTHIPEIKSLMALLYTTIMASLIAMFCYFKLVKNIQPTTLSLTNVMTPILALVIGALFN 266
P + + +++A++ T I L+ + +K I + ++ PIL + GALF
Sbjct 225 YPLSMYGLFAVIAVVTTVIPFVLM-----LEGIKRIGAQRAAAISMAGPILTIFYGALFL 279
Query 267 HERISLMVVIGAMIILSGLFLYFYRDIQANRR 298
ER+ L+ VIG + + YR ++ ++
Sbjct 280 GERLGLIQVIGCGGVFFVITGMEYRKLKTGKK 311
Lambda K H a alpha
0.334 0.143 0.443 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 881367
Database: 664fbd45c8d68a5f8da3295e7356a3de.SwissProt.fasta
Posted date: May 8, 2024 11:30 PM
Number of letters in database: 3,873
Number of sequences in database: 13
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
