BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 93209265ebf951268262013eebe67abd.SwissProt.fasta
16 sequences; 13,944 total letters
Query= ACIAD2652
Length=910
Score E
Sequences producing significant alignments: (Bits) Value
P37411 DNA gyrase subunit A [Salmonella typhimurium (strain LT2 /... 1051 0.0
P41513 DNA gyrase subunit A [Pectobacterium carotovorum] 1051 0.0
P0AES5 DNA gyrase subunit A [Shigella flexneri] 1047 0.0
P0AES4 DNA gyrase subunit A [Escherichia coli (strain K12)] 1047 0.0
P48372 DNA gyrase subunit A [Pseudomonas aeruginosa (strain ATCC ... 1030 0.0
P14829 DNA gyrase subunit A [Klebsiella oxytoca] 1027 0.0
P48369 DNA gyrase subunit A [Aeromonas salmonicida] 988 0.0
P43700 DNA gyrase subunit A [Haemophilus influenzae (strain ATCC ... 978 0.0
P57277 DNA gyrase subunit A [Buchnera aphidicola subsp. Acyrthosi... 905 0.0
P48371 DNA gyrase subunit A [Neisseria gonorrhoeae] 900 0.0
Q8K9W2 DNA gyrase subunit A [Buchnera aphidicola subsp. Schizaphi... 896 0.0
Q89AS3 DNA gyrase subunit A [Buchnera aphidicola subsp. Baizongia... 874 0.0
P05653 DNA gyrase subunit A [Bacillus subtilis (strain 168)] 822 0.0
P20831 DNA gyrase subunit A [Staphylococcus aureus] 798 0.0
Q2G2Q0 DNA gyrase subunit A [Staphylococcus aureus (strain NCTC 8... 798 0.0
Q8DPM2 DNA gyrase subunit A [Streptococcus pneumoniae (strain ATC... 754 0.0
>P37411 DNA gyrase subunit A [Salmonella typhimurium (strain LT2
/ SGSC1412 / ATCC 700720)]
Length=878
Score = 1051 bits (2719), Expect = 0.0
Identities = 536/902 (59%), Positives = 683/902 (76%), Gaps = 32/902 (4%)
Query 5 EIRPIAIEDELKHSYLDYAMSVIVSRALPDVRDGLKPVHRRVLYAMHELGNDYNKAYKKS 64
EI P+ IE+ELK SYLDYAMSVIV RALPDVRDGLKPVHRRVLYAM+ LGND+NKAYKKS
Sbjct 7 EITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWNKAYKKS 66
Query 65 ARVVGDVIGKYHPHGDTAVYDTIVRMAQDFSLRYLLVDGQGNFGSVDGDSAAAMRYTEVR 124
ARVVGDVIGKYHPHGD+AVYDTIVRMAQ FSLRY+LVDGQGNFGS+DGDSAAAMRYTE+R
Sbjct 67 ARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAMRYTEIR 126
Query 125 MTKLTHELLADLEKDTVDWVDNYDGSERIPDVLPTRIPNLLINGAAGIAVGMATNMAPHH 184
+ K+ HEL+ADLEK+TVD+VDNYDG+E+IPDV+PT+IPNLL+NG++GIAVGMATN+ PH+
Sbjct 127 LAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMATNIPPHN 186
Query 185 LNEVIHACLAYADNPNISIEGLMEHITGPDFPTGGIIYGKSGIVDAYRTGKGRLHIRGKY 244
L EVI+ CLAY DN +ISIEGLMEHI GPDFPT II G+ GI +AYRTG+G+++IR +
Sbjct 187 LTEVINGCLAYIDNEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKVYIRARA 246
Query 245 HFEEDEKTGRTTIVFTEIPYQVNKARVIERIAELVKEKKLEGISELRDESDKDGMRIAID 304
E D KTGR TI+ EIPYQVNKAR+IE+IAELVK+K++EGIS LRDESDKDGMRI I+
Sbjct 247 EVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKDKRVEGISALRDESDKDGMRIVIE 306
Query 305 LKRGENAEVIVNNLFLNTQLENSFSINMVCLDNGQPKLMNLKDIIAAFIRHRQEVVTRRT 364
+KR EV++NNL+ TQL+ SF INMV L +GQPK+MNLKDII+AF+RHR+EVVTRRT
Sbjct 307 VKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIISAFVRHRREVVTRRT 366
Query 365 MFELRKARERGHILEGLTVALANIDDIIETIKTSANPAEARERLQAGEWAGGGVIALLEK 424
+FELRKAR+R HILE L +ALANID IIE I+ + PAEA+ L + W G V A+LE+
Sbjct 367 IFELRKARDRAHILEALAIALANIDPIIELIRRAPTPAEAKAALISRPWDLGNVAAMLER 426
Query 425 AGSVSVRPDEIEGEDPARPFGLSEQVYRLSPTQVAAILELRLHRLTGLEQDKLHAEYTEI 484
AG + RP+ +E E FG+ + Y L+ Q AIL+LRL +LTGLE +KL EY E+
Sbjct 427 AGDDAARPEWLEPE-----FGVRDGQYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYKEL 481
Query 485 LGQIAELTAILNDFNLLMGVIREELSLILQQYGDERRTQIVESRIDFCREDLIPEEQVVL 544
L QIAEL IL + LM VIREE+ LI Q+GDERRT+I + D EDLI +E VV+
Sbjct 482 LEQIAELLHILGSADRLMEVIREEMELIRDQFGDERRTEITANSADINIEDLISQEDVVV 541
Query 545 TVSQTGYAKTQPLSDYQAQRRGGRGKSATSMKDDDIIQHLIVASNHATVLCFTNVGKVYR 604
T+S GY K QPL+DY+AQRRGG+GKSA +K++D I L+VA+ H T+LCF++ G++Y
Sbjct 542 TLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSSRGRLYW 601
Query 605 LKVFEVPQASRGAKGRPMVNLLPLDANESITAILPLTEFLENHYVFMATASGTVKRVELE 664
+KV+++P+ASRGA+GRP+VNLLPL+ANE ITAILP+ E+ E VFMATASGTVK+ L
Sbjct 602 MKVYQLPEASRGARGRPIVNLLPLEANERITAILPVREYEEGVNVFMATASGTVKKTALT 661
Query 665 QFANIRSNGLRAIELNEEDTLIGVAITDGQQQIMLFSNEGKAIRFAETDVRAMGRTAKGV 724
+F+ RS G+ A+ LN+ D LIGV +T G ++MLFS GK +RF E VRAMGRTA GV
Sbjct 662 EFSRPRSAGIIAVNLNDGDELIGVDLTSGSDEVMLFSAAGKVVRFKEDAVRAMGRTATGV 721
Query 725 RGMRVTLAAAVDSEDTELDHDELDDSEESTDSSVVSRIVSLVVVPETGEVLCASANGYGK 784
RG+++ +D ++VSL++ G +L + NGYGK
Sbjct 722 RGIKLA------GDD---------------------KVVSLIIPRGEGAILTVTQNGYGK 754
Query 785 RTPVNDFPTKKRGGKGVIAIKTSERNGELVGAVSIDGTKELMLISDGGTLVRTRAAEVAM 844
RT +++PTK R +GVI+IK +ERNG +VGAV +D ++M+I+D GTLVRTR +E+++
Sbjct 755 RTAADEYPTKSRATQGVISIKVTERNGSVVGAVQVDDCDQIMMITDAGTLVRTRVSEISV 814
Query 845 TGRNAQGVRLIRLSDAETLVGVVSIEAVEDDEFIEVVEEIATESEITEVDQPEIDSESSD 904
GRN QGV LIR ++ E +VG+ + DDE ++ ++ E + + E D + +D
Sbjct 815 VGRNTQGVILIRTAEDENVVGLQRVAEPVDDEELDAIDGSVAEGDEDIAPEAESDDDVAD 874
Query 905 SA 906
A
Sbjct 875 DA 876
Score = 49.7 bits (117), Expect = 9e-09
Identities = 55/241 (23%), Positives = 101/241 (42%), Gaps = 39/241 (16%)
Query 543 VLTVSQTGYAKTQPLSDYQAQRRGGRGKSATSMKDDDIIQHLIVASNHATVLCFTNVGKV 602
V + +G K L+++ R G A ++ D D + + + S V+ F+ GKV
Sbjct 646 VFMATASGTVKKTALTEFSRPRSAGI--IAVNLNDGDELIGVDLTSGSDEVMLFSAAGKV 703
Query 603 YRLKVFEVPQASRGAKGRPMVNLLPLDANESITAILPLTEFLENHYVFMATASGTVKRVE 662
R K V R A G + L D + ++ I+P E + T +G KR
Sbjct 704 VRFKEDAVRAMGRTATGVRGIKLAGDD--KVVSLIIPRGEGA----ILTVTQNGYGKRTA 757
Query 663 LEQFA--NIRSNGLRAIELNEED-TLIGVAITDGQQQIMLFSNEGKAIRFAETDVRAMGR 719
+++ + + G+ +I++ E + +++G D QIM+ ++ G +R +++ +GR
Sbjct 758 ADEYPTKSRATQGVISIKVTERNGSVVGAVQVDDCDQIMMITDAGTLVRTRVSEISVVGR 817
Query 720 TAKGVRGMRVT----------LAAAVDSED------------------TELDHDELDDSE 751
+GV +R +A VD E+ E D D DD++
Sbjct 818 NTQGVILIRTAEDENVVGLQRVAEPVDDEELDAIDGSVAEGDEDIAPEAESDDDVADDAD 877
Query 752 E 752
E
Sbjct 878 E 878
>P41513 DNA gyrase subunit A [Pectobacterium carotovorum]
Length=878
Score = 1051 bits (2717), Expect = 0.0
Identities = 542/906 (60%), Positives = 684/906 (75%), Gaps = 37/906 (4%)
Query 5 EIRPIAIEDELKHSYLDYAMSVIVSRALPDVRDGLKPVHRRVLYAMHELGNDYNKAYKKS 64
EI P+ IE+ELK SYLDYAMSVIV RALPDVRDGLKPVHRRVLYAM LGND+NK YKKS
Sbjct 7 EITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMSVLGNDWNKPYKKS 66
Query 65 ARVVGDVIGKYHPHGDTAVYDTIVRMAQDFSLRYLLVDGQGNFGSVDGDSAAAMRYTEVR 124
ARVVGDVIGKYHPHGD+AVY+TIVRMAQ FSLRY+LVDGQGNFGS+DGDSAAAMRYTE+R
Sbjct 67 ARVVGDVIGKYHPHGDSAVYETIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAMRYTEIR 126
Query 125 MTKLTHELLADLEKDTVDWVDNYDGSERIPDVLPTRIPNLLINGAAGIAVGMATNMAPHH 184
M+K+ HELLADLEK+TVD+V NYDG+E+IPDV+PTRIPNLL+NG++GIAVGMATN+ PH+
Sbjct 127 MSKIAHELLADLEKETVDFVPNYDGTEQIPDVMPTRIPNLLVNGSSGIAVGMATNIPPHN 186
Query 185 LNEVIHACLAYADNPNISIEGLMEHITGPDFPTGGIIYGKSGIVDAYRTGKGRLHIRGKY 244
L EV++ CLAY D+ NIS+EGLMEHI GPDFPT II G+ GI +AYRTG+G+++IR +
Sbjct 187 LTEVVNGCLAYIDDENISLEGLMEHIKGPDFPTAAIINGRRGIEEAYRTGRGKIYIRARA 246
Query 245 HFEEDEKTGRTTIVFTEIPYQVNKARVIERIAELVKEKKLEGISELRDESDKDGMRIAID 304
E D KTGR TI+ EIPYQVNKAR+IE+IAELVK+K++EGIS LRDESDKDGMRI I+
Sbjct 247 EVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKDKRIEGISALRDESDKDGMRIVIE 306
Query 305 LKRGENAEVIVNNLFLNTQLENSFSINMVCLDNGQPKLMNLKDIIAAFIRHRQEVVTRRT 364
+KR EV++NNL+ TQL+ SF INMV L GQPK+M LKDI+ AF+RHR+EVVTRRT
Sbjct 307 IKRDAVGEVVLNNLYSQTQLQTSFGINMVALHQGQPKIMPLKDILVAFVRHRREVVTRRT 366
Query 365 MFELRKARERGHILEGLTVALANIDDIIETIKTSANPAEARERLQAGEWAGGGVIALLEK 424
+FELRKAR+R HILEGL +ALANID IIE I+ +A+PAEA+ L A W G V +LE+
Sbjct 367 IFELRKARDRAHILEGLAIALANIDPIIELIRRAASPAEAKASLIAQAWELGSVATMLER 426
Query 425 AGSVSVRPDEIEGEDPARPFGLSEQVYRLSPTQVAAILELRLHRLTGLEQDKLHAEYTEI 484
AG + RP+ +E E FG+ + Y L+ Q AIL+LRL +LTG+E +KL EY E+
Sbjct 427 AGDDAARPEWLEPE-----FGIRDGRYYLTEQQAQAILDLRLQKLTGMEHEKLLDEYKEL 481
Query 485 LGQIAELTAILNDFNLLMGVIREELSLILQQYGDERRTQIVESRIDFCREDLIPEEQVVL 544
L +IAEL ILN LM VIREEL QY DERRT+I + D EDLI +E VV+
Sbjct 482 LAEIAELLYILNSPERLMEVIREELEAFKTQYSDERRTEITANTADINIEDLINQEDVVV 541
Query 545 TVSQTGYAKTQPLSDYQAQRRGGRGKSATSMKDDDIIQHLIVASNHATVLCFTNVGKVYR 604
T+S GY K QPLSDY+AQRRGG+GKSA +K++D I L+VA+ H T+LCF++ G++Y
Sbjct 542 TLSHQGYVKYQPLSDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSSRGRLYW 601
Query 605 LKVFEVPQASRGAKGRPMVNLLPLDANESITAILPLTEFLENHYVFMATASGTVKRVELE 664
+KV+++P+ASRGA+GRP+VNLLPL+A+E ITAILP+ E+ E ++FMATASGTVK+ L
Sbjct 602 MKVYQLPEASRGARGRPIVNLLPLEADERITAILPVREYEEGRHIFMATASGTVKKTALT 661
Query 665 QFANIRSNGLRAIELNEEDTLIGVAITDGQQQIMLFSNEGKAIRFAETDVRAMGRTAKGV 724
+F+ +G+ A+ LNE D LIGV +TDG + MLFS EGK +RF+E VR+MGRTA GV
Sbjct 662 EFSR-HVSGIIAVNLNEGDELIGVDLTDGSDEAMLFSAEGKVVRFSEQAVRSMGRTATGV 720
Query 725 RGMRVTLAAAVDSEDTELDHDELDDSEESTDSSVVSRIVSLVVVPETGEVLCASANGYGK 784
RG+ + ED R+VSL++ G++L + NG+GK
Sbjct 721 RGIN------LQGED---------------------RVVSLIIPRGEGDILTVTQNGFGK 753
Query 785 RTPVNDFPTKKRGGKGVIAIKTSERNGELVGAVSIDGTKELMLISDGGTLVRTRAAEVAM 844
RT V+++PTK R KGVI+IK SERNG++VGAV +D ++M+I+D GTLVRTR +EV++
Sbjct 754 RTAVSEYPTKSRATKGVISIKVSERNGKVVGAVQVDAADQIMMITDAGTLVRTRVSEVSI 813
Query 845 TGRNAQGVRLIRLSDAETLVGVVSI-EAVEDDEFIEVVEEIATESEITEVDQPEIDSESS 903
GRN QGV LIR ++ E +VG+ + E VED+E VV+ E E+ E D D +
Sbjct 814 VGRNTQGVTLIRTAEDEHVVGLQRVAEPVEDEELDGVVK---VEGEVAEDDDAIDDIDGD 870
Query 904 DSAATE 909
D A +
Sbjct 871 DDIAED 876
>P0AES5 DNA gyrase subunit A [Shigella flexneri]
Length=875
Score = 1047 bits (2707), Expect = 0.0
Identities = 535/900 (59%), Positives = 682/900 (76%), Gaps = 32/900 (4%)
Query 5 EIRPIAIEDELKHSYLDYAMSVIVSRALPDVRDGLKPVHRRVLYAMHELGNDYNKAYKKS 64
EI P+ IE+ELK SYLDYAMSVIV RALPDVRDGLKPVHRRVLYAM+ LGND+NKAYKKS
Sbjct 7 EITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWNKAYKKS 66
Query 65 ARVVGDVIGKYHPHGDTAVYDTIVRMAQDFSLRYLLVDGQGNFGSVDGDSAAAMRYTEVR 124
ARVVGDVIGKYHPHGD+AVYDTIVRMAQ FSLRY+LVDGQGNFGS+DGDSAAAMRYTE+R
Sbjct 67 ARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAMRYTEIR 126
Query 125 MTKLTHELLADLEKDTVDWVDNYDGSERIPDVLPTRIPNLLINGAAGIAVGMATNMAPHH 184
+ K+ HEL+ADLEK+TVD+VDNYDG+E+IPDV+PT+IPNLL+NG++GIAVGMATN+ PH+
Sbjct 127 LAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMATNIPPHN 186
Query 185 LNEVIHACLAYADNPNISIEGLMEHITGPDFPTGGIIYGKSGIVDAYRTGKGRLHIRGKY 244
L EVI+ CLAY D+ +ISIEGLMEHI GPDFPT II G+ GI +AYRTG+G+++IR +
Sbjct 187 LTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKVYIRARA 246
Query 245 HFEEDEKTGRTTIVFTEIPYQVNKARVIERIAELVKEKKLEGISELRDESDKDGMRIAID 304
E D KTGR TI+ EIPYQVNKAR+IE+IAELVKEK++EGIS LRDESDKDGMRI I+
Sbjct 247 EVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDGMRIVIE 306
Query 305 LKRGENAEVIVNNLFLNTQLENSFSINMVCLDNGQPKLMNLKDIIAAFIRHRQEVVTRRT 364
+KR EV++NNL+ TQL+ SF INMV L +GQPK+MNLKDIIAAF+RHR+EVVTRRT
Sbjct 307 VKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRREVVTRRT 366
Query 365 MFELRKARERGHILEGLTVALANIDDIIETIKTSANPAEARERLQAGEWAGGGVIALLEK 424
+FELRKAR+R HILE L VALANID IIE I+ + PAEA+ L A W G V A+LE+
Sbjct 367 IFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNVAAMLER 426
Query 425 AGSVSVRPDEIEGEDPARPFGLSEQVYRLSPTQVAAILELRLHRLTGLEQDKLHAEYTEI 484
AG + RP+ +E E FG+ + +Y L+ Q AIL+LRL +LTGLE +KL EY E+
Sbjct 427 AGDDAARPEWLEPE-----FGVRDGLYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYKEL 481
Query 485 LGQIAELTAILNDFNLLMGVIREELSLILQQYGDERRTQIVESRIDFCREDLIPEEQVVL 544
L QIAEL IL + LM VIREEL L+ +Q+GD+RRT+I + D EDLI +E VV+
Sbjct 482 LDQIAELLRILGSADRLMEVIREELELVREQFGDKRRTEITANSADINLEDLITQEDVVV 541
Query 545 TVSQTGYAKTQPLSDYQAQRRGGRGKSATSMKDDDIIQHLIVASNHATVLCFTNVGKVYR 604
T+S GY K QPLS+Y+AQRRGG+GKSA +K++D I L+VA+ H +LCF++ G+VY
Sbjct 542 TLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSSRGRVYS 601
Query 605 LKVFEVPQASRGAKGRPMVNLLPLDANESITAILPLTEFLENHYVFMATASGTVKRVELE 664
+KV+++P+A+RGA+GRP+VNLLPL+ +E ITAILP+TEF E VFMATA+GTVK+ L
Sbjct 602 MKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVTEFEEGVKVFMATANGTVKKTVLT 661
Query 665 QFANIRSNGLRAIELNEEDTLIGVAITDGQQQIMLFSNEGKAIRFAETDVRAMGRTAKGV 724
+F +R+ G AI+L + D LIGV +T G+ ++MLFS EGK +RF E+ VRAMG GV
Sbjct 662 EFNRLRTAGKVAIKLVDGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSVRAMGCNTTGV 721
Query 725 RGMRVTLAAAVDSEDTELDHDELDDSEESTDSSVVSRIVSLVVVPETGEVLCASANGYGK 784
RG+R+ ++VSL+V G +L A+ NGYGK
Sbjct 722 RGIRLGEG---------------------------DKVVSLIVPRGDGAILTATQNGYGK 754
Query 785 RTPVNDFPTKKRGGKGVIAIKTSERNGELVGAVSIDGTKELMLISDGGTLVRTRAAEVAM 844
RT V ++PTK R KGVI+IK +ERNG +VGAV +D ++M+I+D GTLVRTR +E+++
Sbjct 755 RTAVAEYPTKSRATKGVISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSEISI 814
Query 845 TGRNAQGVRLIRLSDAETLVGVVSIEAVEDDEFIEVVEEIATESEITEVDQPEIDSESSD 904
GRN QGV LIR ++ E +VG+ + D+E ++ ++ A E + + ++D E +
Sbjct 815 VGRNTQGVILIRTAEDENVVGLQRVAEPVDEEDLDTIDGSAAEGDDEIAPEVDVDDEPEE 874
>P0AES4 DNA gyrase subunit A [Escherichia coli (strain K12)]
Length=875
Score = 1047 bits (2707), Expect = 0.0
Identities = 535/900 (59%), Positives = 682/900 (76%), Gaps = 32/900 (4%)
Query 5 EIRPIAIEDELKHSYLDYAMSVIVSRALPDVRDGLKPVHRRVLYAMHELGNDYNKAYKKS 64
EI P+ IE+ELK SYLDYAMSVIV RALPDVRDGLKPVHRRVLYAM+ LGND+NKAYKKS
Sbjct 7 EITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWNKAYKKS 66
Query 65 ARVVGDVIGKYHPHGDTAVYDTIVRMAQDFSLRYLLVDGQGNFGSVDGDSAAAMRYTEVR 124
ARVVGDVIGKYHPHGD+AVYDTIVRMAQ FSLRY+LVDGQGNFGS+DGDSAAAMRYTE+R
Sbjct 67 ARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAMRYTEIR 126
Query 125 MTKLTHELLADLEKDTVDWVDNYDGSERIPDVLPTRIPNLLINGAAGIAVGMATNMAPHH 184
+ K+ HEL+ADLEK+TVD+VDNYDG+E+IPDV+PT+IPNLL+NG++GIAVGMATN+ PH+
Sbjct 127 LAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMATNIPPHN 186
Query 185 LNEVIHACLAYADNPNISIEGLMEHITGPDFPTGGIIYGKSGIVDAYRTGKGRLHIRGKY 244
L EVI+ CLAY D+ +ISIEGLMEHI GPDFPT II G+ GI +AYRTG+G+++IR +
Sbjct 187 LTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKVYIRARA 246
Query 245 HFEEDEKTGRTTIVFTEIPYQVNKARVIERIAELVKEKKLEGISELRDESDKDGMRIAID 304
E D KTGR TI+ EIPYQVNKAR+IE+IAELVKEK++EGIS LRDESDKDGMRI I+
Sbjct 247 EVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDGMRIVIE 306
Query 305 LKRGENAEVIVNNLFLNTQLENSFSINMVCLDNGQPKLMNLKDIIAAFIRHRQEVVTRRT 364
+KR EV++NNL+ TQL+ SF INMV L +GQPK+MNLKDIIAAF+RHR+EVVTRRT
Sbjct 307 VKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRREVVTRRT 366
Query 365 MFELRKARERGHILEGLTVALANIDDIIETIKTSANPAEARERLQAGEWAGGGVIALLEK 424
+FELRKAR+R HILE L VALANID IIE I+ + PAEA+ L A W G V A+LE+
Sbjct 367 IFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNVAAMLER 426
Query 425 AGSVSVRPDEIEGEDPARPFGLSEQVYRLSPTQVAAILELRLHRLTGLEQDKLHAEYTEI 484
AG + RP+ +E E FG+ + +Y L+ Q AIL+LRL +LTGLE +KL EY E+
Sbjct 427 AGDDAARPEWLEPE-----FGVRDGLYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYKEL 481
Query 485 LGQIAELTAILNDFNLLMGVIREELSLILQQYGDERRTQIVESRIDFCREDLIPEEQVVL 544
L QIAEL IL + LM VIREEL L+ +Q+GD+RRT+I + D EDLI +E VV+
Sbjct 482 LDQIAELLRILGSADRLMEVIREELELVREQFGDKRRTEITANSADINLEDLITQEDVVV 541
Query 545 TVSQTGYAKTQPLSDYQAQRRGGRGKSATSMKDDDIIQHLIVASNHATVLCFTNVGKVYR 604
T+S GY K QPLS+Y+AQRRGG+GKSA +K++D I L+VA+ H +LCF++ G+VY
Sbjct 542 TLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSSRGRVYS 601
Query 605 LKVFEVPQASRGAKGRPMVNLLPLDANESITAILPLTEFLENHYVFMATASGTVKRVELE 664
+KV+++P+A+RGA+GRP+VNLLPL+ +E ITAILP+TEF E VFMATA+GTVK+ L
Sbjct 602 MKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVTEFEEGVKVFMATANGTVKKTVLT 661
Query 665 QFANIRSNGLRAIELNEEDTLIGVAITDGQQQIMLFSNEGKAIRFAETDVRAMGRTAKGV 724
+F +R+ G AI+L + D LIGV +T G+ ++MLFS EGK +RF E+ VRAMG GV
Sbjct 662 EFNRLRTAGKVAIKLVDGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSVRAMGCNTTGV 721
Query 725 RGMRVTLAAAVDSEDTELDHDELDDSEESTDSSVVSRIVSLVVVPETGEVLCASANGYGK 784
RG+R+ ++VSL+V G +L A+ NGYGK
Sbjct 722 RGIRLGEG---------------------------DKVVSLIVPRGDGAILTATQNGYGK 754
Query 785 RTPVNDFPTKKRGGKGVIAIKTSERNGELVGAVSIDGTKELMLISDGGTLVRTRAAEVAM 844
RT V ++PTK R KGVI+IK +ERNG +VGAV +D ++M+I+D GTLVRTR +E+++
Sbjct 755 RTAVAEYPTKSRATKGVISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSEISI 814
Query 845 TGRNAQGVRLIRLSDAETLVGVVSIEAVEDDEFIEVVEEIATESEITEVDQPEIDSESSD 904
GRN QGV LIR ++ E +VG+ + D+E ++ ++ A E + + ++D E +
Sbjct 815 VGRNTQGVILIRTAEDENVVGLQRVAEPVDEEDLDTIDGSAAEGDDEIAPEVDVDDEPEE 874
>P48372 DNA gyrase subunit A [Pseudomonas aeruginosa (strain ATCC
15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 /
1C / PRS 101 / PAO1)]
Length=923
Score = 1030 bits (2663), Expect = 0.0
Identities = 546/949 (58%), Positives = 693/949 (73%), Gaps = 82/949 (9%)
Query 5 EIRPIAIEDELKHSYLDYAMSVIVSRALPDVRDGLKPVHRRVLYAMHELGNDYNKAYKKS 64
EI P+ IEDELK SYLDYAMSVIV RALPD RDGLKPVHRRVLYAM ELGND+NK YKKS
Sbjct 7 EILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLYAMSELGNDWNKPYKKS 66
Query 65 ARVVGDVIGKYHPHGDTAVYDTIVRMAQDFSLRYLLVDGQGNFGSVDGDSAAAMRYTEVR 124
ARVVGDVIGKYHPHGDTAVYDTIVRMAQ FSLRY+LVDGQGNFGSVDGD+AAAMRYTEVR
Sbjct 67 ARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDNAAAMRYTEVR 126
Query 125 MTKLTHELLADLEKDTVDWVDNYDGSERIPDVLPTRIPNLLINGAAGIAVGMATNMAPHH 184
M KL HELLADLEK+TVDWV NYDG+E+IP V+PT+IPNLL+NG++GIAVGMATN+ PH+
Sbjct 127 MAKLAHELLADLEKETVDWVPNYDGTEQIPAVMPTKIPNLLVNGSSGIAVGMATNIPPHN 186
Query 185 LNEVIHACLAYADNPNISIEGLMEHITGPDFPTGGIIYGKSGIVDAYRTGKGRLHIRGKY 244
L EVI CLA DNP+++++ LM++I GPDFPT GII G++GI++AYRTG+GR++IR +
Sbjct 187 LGEVIDGCLALMDNPDLTVDELMQYIPGPDFPTAGIINGRAGIIEAYRTGRGRIYIRARA 246
Query 245 HFEEDEK-TGRTTIVFTEIPYQVNKARVIERIAELVKEKKLEGISELRDESDKDGMRIAI 303
EE EK GR I+ TE+PYQ+NKAR+IE+IAELVKEKK+EGISELRDESDKDGMR+ I
Sbjct 247 VVEEMEKGGGREQIIITELPYQLNKARLIEKIAELVKEKKIEGISELRDESDKDGMRVVI 306
Query 304 DLKRGENAEVIVNNLFLNTQLENSFSINMVCLDNGQPKLMNLKDIIAAFIRHRQEVVTRR 363
+L+RGE EV++NNL+ TQL++ F IN+V L +GQP+ +NLKD++ F+RHR+EVVTRR
Sbjct 307 ELRRGEVGEVVLNNLYAQTQLQSVFGINVVALVDGQPRTLNLKDMLEVFVRHRREVVTRR 366
Query 364 TMFELRKARERGHILEGLTVALANIDDIIETIKTSANPAEARERLQAGEWAGGGVIALLE 423
T++ELRKARERGHILEG VAL+NID +IE IK+S PAEA+ERL A W V A++E
Sbjct 367 TVYELRKARERGHILEGQAVALSNIDPVIELIKSSPTPAEAKERLIATAWESSAVEAMVE 426
Query 424 KAGSVSVRPDEIEGEDPARPFGLSEQVYRLSPTQVAAILELRLHRLTGLEQDKLHAEYTE 483
+AG+ + RP++++ + +GL + Y LSP Q AILELRLHRLTGLE +KL +EY E
Sbjct 427 RAGADACRPEDLDPQ-----YGLRDGKYYLSPEQAQAILELRLHRLTGLEHEKLLSEYQE 481
Query 484 ILGQIAELTAILNDFNLLMGVIREELSLILQQYGDERRTQIVESRIDFCREDLIPEEQVV 543
IL I EL IL + LM VIREEL + ++GD RRT+IV S++D DLI EE V
Sbjct 482 ILNLIGELIRILTNPARLMEVIREELEAVKAEFGDARRTEIVASQVDLTIADLITEEDRV 541
Query 544 LTVSQTGYAKTQPLSDYQAQRRGGRGKSATSMKDDDIIQHLIVASNHATVLCFTNVGKVY 603
+T+S GYAK+QPL+ YQAQRRGG+GKSAT MKD+D I+HL+VA++HAT+L F++ GKVY
Sbjct 542 VTISHGGYAKSQPLAAYQAQRRGGKGKSATGMKDEDYIEHLLVANSHATLLLFSSKGKVY 601
Query 604 RLKVFEVPQASRGAKGRPMVNLLPLDANESITAILPL-TEFLENH--------------- 647
L+ FE+P+ASR A+GRP+VNLLPLD E ITA+L + E L+ +
Sbjct 602 WLRTFEIPEASRTARGRPLVNLLPLDEGERITAMLQIDLEALQQNGGADDDLDEAEGAVL 661
Query 648 ---------------------------YVFMATASGTVKRVELEQFANIRSNGLRAIELN 680
Y+FMATA GTVK+ L QF+ RS+GL A++L
Sbjct 662 EGEVVEAAEVEEVEGETAELVAEPTGAYIFMATAFGTVKKTPLVQFSRPRSSGLIALKLE 721
Query 681 EEDTLIGVAITDGQQQIMLFSNEGKAIRFAETDVRAMGRTAKGVRGMRVTLAAAVDSEDT 740
E DTLI AITDG +++MLFS+ GK IRFAE+ VR MGR A+GVRGMR+
Sbjct 722 EGDTLIAAAITDGAKEVMLFSSAGKVIRFAESVVRIMGRNARGVRGMRLGKG-------- 773
Query 741 ELDHDELDDSEESTDSSVVSRIVSLVVVPETGEVLCASANGYGKRTPVNDFPTKKRGGKG 800
+++S+++ ++L AS G+GKRTP++ FP + RGG+G
Sbjct 774 -------------------QQLISMLIPESGAQILTASERGFGKRTPLSKFPRRGRGGQG 814
Query 801 VIAIKTSERNGELVGAVSIDGTKELMLISDGGTLVRTRAAEVAMTGRNAQGVRLIRLSDA 860
VIA+ T+ERNG L+ AV + +E+MLISD GTLVRTR EV+++GRN QGV LI+L+
Sbjct 815 VIAMVTNERNGALIAAVQVQEGEEIMLISDQGTLVRTRVDEVSLSGRNTQGVTLIKLASD 874
Query 861 ETLVGVVSIEAVE--DDEFIEVVEEIAT---ESEITEVDQPEIDSESSD 904
E LVG+ ++ DDE + EE A ES +E +P ++E ++
Sbjct 875 EVLVGLERVQEPSGGDDEDLPEGEEAAESLGESAESE-SEPAAEAEGNE 922
Score = 47.4 bits (111), Expect = 4e-08
Identities = 44/184 (24%), Positives = 85/184 (46%), Gaps = 19/184 (10%)
Query 738 EDTELDHDELDDSEESTDSSVVSRIVSLVV---VPETGEVLCASANGYGKRTPVNDFPTK 794
E+ E E D+ + +V+ V L + + E V+ S GY K P+ + +
Sbjct 505 EELEAVKAEFGDARRT---EIVASQVDLTIADLITEEDRVVTISHGGYAKSQPLAAYQAQ 561
Query 795 KRGGKGVIAIKTSERNGELVGAVSI-DGTKELMLISDGGTLVRTRAAEVAMTGRNAQG-- 851
+RGGKG A T ++ + + + + + L+L S G + R E+ R A+G
Sbjct 562 RRGGKGKSA--TGMKDEDYIEHLLVANSHATLLLFSSKGKVYWLRTFEIPEASRTARGRP 619
Query 852 -VRLIRLSDAETLVGV--VSIEAVED----DEFIEVVEEIATESEITE-VDQPEIDSESS 903
V L+ L + E + + + +EA++ D+ ++ E E E+ E + E++ E++
Sbjct 620 LVNLLPLDEGERITAMLQIDLEALQQNGGADDDLDEAEGAVLEGEVVEAAEVEEVEGETA 679
Query 904 DSAA 907
+ A
Sbjct 680 ELVA 683
>P14829 DNA gyrase subunit A [Klebsiella oxytoca]
Length=876
Score = 1027 bits (2655), Expect = 0.0
Identities = 536/897 (60%), Positives = 675/897 (75%), Gaps = 35/897 (4%)
Query 5 EIRPIAIEDELKHSYLDYAMSVIVSRALPDVRDGLKPVHRRVLYAMHELGNDYNKAYKKS 64
EI P+ IE+ELK SYLDYAMSVIV RALPDVRDGLKPVHRRVLYAM+ LGND+NKAYKKS
Sbjct 7 EITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWNKAYKKS 66
Query 65 ARVVGDVIGKYHPHGDTAVYDTIVRMAQDFSLRYLLVDGQGNFGSVDGDSAAAMRYTEVR 124
ARVVGDVIGKYHPHGDTAVYDTIVRMAQ FSLRY+LVDGQGNFGSVDGDSAAAMRYTE+R
Sbjct 67 ARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAMRYTEIR 126
Query 125 MTKLTHELLADLEKDTVDWVDNYDGSERIPDVLPTRIPNLLINGAAGIAVGMATNMAPHH 184
M+K+ HEL+ADLEK+TVD+VDNYDG+E+IPDV+PT+IPNLL+NG+ GIAVGMATN+ PH+
Sbjct 127 MSKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSFGIAVGMATNIPPHN 186
Query 185 LNEVIHACLAYADNPNISIEGLMEHITGPDFPTGGIIYGKSGIVDAYRTGKGRLHIRGKY 244
L EVI+ LAY ++ ISIEGLMEHI GPDFPT II G+ GI +AYRTG+G+++I +
Sbjct 187 LTEVINGRLAYVEDEEISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKVYICARA 246
Query 245 HFEEDEKTGRTTIVFTEIPYQVNKARVIERIAELVKEKKLEGISELRDESDKDGMRIAID 304
E D KTGR TI+ EIPYQVNKAR+IE+IAELVKEK++EGIS LRDESDKDGMRI I+
Sbjct 247 EVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDGMRIVIE 306
Query 305 LKRGENAEVIVNNLFLNTQLENSFSINMVCLDNGQPKLMNLKDIIAAFIRHRQEVVTRRT 364
+KR V++NNL+ TQL+ SF INMV L +GQPK+MNLK+IIAAF+RHR+EVVTRRT
Sbjct 307 VKRDAVGRVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKEIIAAFVRHRREVVTRRT 366
Query 365 MFELRKARERGHILEGLTVALANIDDIIETIKTSANPAEARERLQAGEWAGGGVIALLEK 424
+ LRKAR+R ILE L++ALANID IIE I+ + PAEA+ L A W G V A+LE
Sbjct 367 ILALRKARDRADILEALSIALANIDPIIELIRRAPTPAEAKAGLIARSWDLGNVSAMLE- 425
Query 425 AGSVSVRPDEIEGEDPARPFGLSEQVYRLSPTQVAAILELRLHRLTGLEQDKLHAEYTEI 484
AG + RP+ +E E FG+ + Y L+ Q AIL+LRL +LTGLE +KL EY E+
Sbjct 426 AGDDAARPEWLEPE-----FGVRDGQYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYKEL 480
Query 485 LGQIAELTAILNDFNLLMGVIREELSLILQQYGDERRTQIVESRIDFCREDLIPEEQVVL 544
L QIAEL IL + LM VIREEL L+ +Q+GD RRT I + +D EDLI +E VV+
Sbjct 481 LEQIAELLHILGSADRLMEVIREELELVREQFGDARRTDITANSVDINIEDLITQEDVVV 540
Query 545 TVSQTGYAKTQPLSDYQAQRRGGRGKSATSMKDDDIIQHLIVASNHATVLCFTNVGKVYR 604
T+S GY K QP++DY+AQRRGG+GKSA +K++D I L+VA+ H T+LCF++ G++Y
Sbjct 541 TLSHEGYVKYQPVNDYEAQRRGGKGKSAPRIKEEDFIDRLLVANTHDTILCFSSRGRLYW 600
Query 605 LKVFEVPQASRGAKGRPMVNLLPLDANESITAILPLTEFLENHYVFMATASGTVKRVELE 664
+KV++VP+ASRGA+GRP+VNLLPL+ANE TAILP+ E+ E VFMATASGTVK+ +
Sbjct 601 MKVYQVPEASRGARGRPIVNLLPLEANERYTAILPVREYEEGVNVFMATASGTVKKTPAD 660
Query 665 QFANIRSNGLRAIELNEEDTLIGVAITDGQQQIMLFSNEGKAIRFAETDVRAMGRTAKGV 724
+F+ RS G+ A+ LNE D LIGV +T GQ ++MLFS GK +RF E DVRAMGRTA GV
Sbjct 661 EFSRPRSAGIIAVNLNEGDELIGVDLTSGQDEVMLFSAAGKVVRFKEDDVRAMGRTATGV 720
Query 725 RGMRVTLAAAVDSEDTELDHDELDDSEESTDSSVVSRIVSLVVVPETGEVLCASANGYGK 784
RG+++ ED ++VSL+V G +L A+ NGY K
Sbjct 721 RGIKLA------GED---------------------KVVSLIVPRGEGRILTATENGYRK 753
Query 785 RTPVNDFPTKKRGGKGVIAIKTSERNGELVGAVSIDGTKELMLISDGGTLVRTRAAEVAM 844
RT V ++PTK R +GVI+IK +ERNG +VGAV +D ++M+I+D GTLVR R +EV++
Sbjct 754 RTAVAEYPTKSRATQGVISIKVTERNGSVVGAVQVDDCDQIMMITDAGTLVRIRVSEVSI 813
Query 845 TGRNAQGVRLIRLSDAETLVGVVSIEAVEDDEFIEVVEEIATESEITEVDQPEIDSE 901
GRN QGV LIR ++ E +V + + DDE ++ ++ A E + E PE D++
Sbjct 814 VGRNTQGVILIRTAEDENVVALQRVAEPVDDEELDAIDGSAAEGD--EDIAPEADTD 868
>P48369 DNA gyrase subunit A [Aeromonas salmonicida]
Length=922
Score = 988 bits (2553), Expect = 0.0
Identities = 523/914 (57%), Positives = 674/914 (74%), Gaps = 32/914 (4%)
Query 5 EIRPIAIEDELKHSYLDYAMSVIVSRALPDVRDGLKPVHRRVLYAMHELGNDYNKAYKKS 64
EI PI IE+ELK SYLDYAMSVIV RALPDVRDGLKPVHRRVL+AM+ELGND+NK YKKS
Sbjct 7 EITPINIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELGNDWNKPYKKS 66
Query 65 ARVVGDVIGKYHPHGDTAVYDTIVRMAQDFSLRYLLVDGQGNFGSVDGDSAAAMRYTEVR 124
ARVVGDVIGKYHPHGD+AVYDTIVR+AQDFS+RY+LVDGQGNFGSVDGDSAAAMRYTEVR
Sbjct 67 ARVVGDVIGKYHPHGDSAVYDTIVRLAQDFSMRYMLVDGQGNFGSVDGDSAAAMRYTEVR 126
Query 125 MTKLTHELLADLEKDTVDWVDNYDGSERIPDVLPTRIPNLLINGAAGIAVGMATNMAPHH 184
M +++HELLADL+K+TVDWV NYDG+E IP V+PT++PNLL+NG++GIAVGMA N+ PH+
Sbjct 127 MARISHELLADLDKETVDWVPNYDGTEMIPAVMPTKVPNLLVNGSSGIAVGMAWNIPPHN 186
Query 185 LNEVIHACLAYADNPNISIEGLMEHITGPDFPTGGIIYGKSGIVDAYRTGKGRLHIRGKY 244
L E+++ CLA +N N++I+ LM +ITGPDFPTG II G++GIV AYRTG+G +++R K
Sbjct 187 LTEIVNGCLALIENGNLTIDELMTYITGPDFPTGAIINGRAGIVQAYRTGRGSVYVRAKA 246
Query 245 HFEEDEKTGRTTIVFT-EIPYQVNKARVIERIAELVKEKKLEGISELRDESDKDGMRIAI 303
E D+KT R TI+ E+PYQVNKAR+IE+IAELVKEKK+EGIS LRDESDKD RI I
Sbjct 247 EVEVDDKTSRETIIIVHELPYQVNKARLIEKIAELVKEKKVEGISALRDESDKDACRIVI 306
Query 304 DLKRGENAEVIVNNLFLNTQLENSFSINMVCLDNGQPKLMNLKDIIAAFIRHRQEVVTRR 363
++KRGE+ E+++NNL+ +TQL+ +F INMV LDN QPK+MNLKDI+ AF+ HR+EVVTRR
Sbjct 307 EIKRGESGEIVLNNLYKHTQLQTTFGINMVALDNNQPKVMNLKDILDAFLLHRREVVTRR 366
Query 364 TMFELRKARERGHILEGLTVALANIDDIIETIKTSANPAEARERLQAGEWAGGGVIALLE 423
T+FELRKAR+R HILEGL VALANID IIE I+ S PA+A+ +L A W G V A+LE
Sbjct 367 TVFELRKARDRAHILEGLAVALANIDPIIELIRHSDTPADAKAKLVARGWELGNVAAMLE 426
Query 424 KAGSVSVRPDEIEGEDPARPFGLSEQVYRLSPTQVAAILELRLHRLTGLEQDKLHAEYTE 483
KAG + RP+ +E E FG+ E Y L+ Q AIL+LRLH+LTGLE K+ EY
Sbjct 427 KAGDDAARPEWLEPE-----FGIREGQYFLTEQQAQAILDLRLHKLTGLEHGKILEEYQS 481
Query 484 ILGQIAELTAILNDFNLLMGVIREELSLILQQYGDERRTQIVESRIDFCREDLIPEEQVV 543
+L IAEL IL LM VIR+EL + +QYGDER +I S + EDLI E VV
Sbjct 482 LLDLIAELLFILASPERLMEVIRDELLAVREQYGDERPPEISASSAEINIEDLITPEDVV 541
Query 544 LTVSQTGYAKTQPLSDYQAQRRGGRGKSATSMKDDDIIQHLIVASNHATVLCFTNVGKVY 603
+T+S GY K QP++DY+AQRRGGRGKSAT +K+++ ++ L+VA+ H T+LCF+ GKVY
Sbjct 542 VTLSHQGYVKYQPITDYEAQRRGGRGKSATRIKEENFVERLLVANTHDTILCFSTRGKVY 601
Query 604 RLKVFEVPQASRGAKGRPMVNLLPLDANESITAILPLTEFLENHYVFMATASGTVKRVEL 663
LKV+++P+ASRGA+GRP++NLLPL+ E ITAILP+ E+ ++ YVF ATA GTVK+ L
Sbjct 602 WLKVYQLPEASRGARGRPIINLLPLEEGERITAILPVKEYADDKYVFFATADGTVKKTSL 661
Query 664 EQFANIRSNGLRAIELNEEDTLIGVAITDGQQQIMLFSNEGKAIRFAE---TDVRAMGRT 720
F+ S+G+RAI L E D LIGV ITDG +IMLFS+ GK +RF E ++ M +
Sbjct 662 SAFSRPLSSGIRAINLKEGDELIGVDITDGSNEIMLFSDAGKVVRFNEGSAAPMQPMLMS 721
Query 721 AKGVRGMRVTLAAAVDSEDTELDHDELDDSEES------------TDSSV-------VSR 761
+ V G ++ A + +D D+ E +S ES T V +
Sbjct 722 SDDVDGDDESVIDAGNDDDGS-DNGEGSESTESKGTFKGVRPMGRTAGGVRGIRLLNGDK 780
Query 762 IVSLVVVPETGEVLCASANGYGKRTPVNDFPTKKRGGKGVIAIKTSERNGELVGAVSIDG 821
+VSL+V G +L A+ NGYGK T + ++PTK RG +GV +IK E +G+ V +D
Sbjct 781 VVSLIVPRGEGAILTATENGYGKGTALTEYPTKSRGTQGVRSIKVDE-DGK-VSIDQVDD 838
Query 822 TKELMLISDGGTLVRTRAAEVAMTGRNAQGVRLIRLSDAETLVGVVSI-EAVEDDEFIEV 880
T ++MLI++GGTLVRTR +EV++ GRN GVRLIR + ET+VG+ I E+ E++ +
Sbjct 839 TDQIMLITNGGTLVRTRVSEVSIIGRNTGGVRLIRTGEDETVVGLQRIAESYEEENDVMA 898
Query 881 VEEIATESEITEVD 894
++ +E T D
Sbjct 899 IDGEVSEGTDTAPD 912
>P43700 DNA gyrase subunit A [Haemophilus influenzae (strain ATCC
51907 / DSM 11121 / KW20 / Rd)]
Length=880
Score = 978 bits (2529), Expect = 0.0
Identities = 504/886 (57%), Positives = 670/886 (76%), Gaps = 15/886 (2%)
Query 4 SEIRPIAIEDELKHSYLDYAMSVIVSRALPDVRDGLKPVHRRVLYAMHELGNDYNKAYKK 63
S I P+ IE+ELK SYLDYAMSVIV RALPDVRDGLKPVHRRVL++M GN NK Y K
Sbjct 7 SSITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFSMDREGNTANKKYVK 66
Query 64 SARVVGDVIGKYHPHGDTAVYDTIVRMAQDFSLRYLLVDGQGNFGSVDGDSAAAMRYTEV 123
SARVVGDVIGKYHPHGD+AVYDTIVRMAQ FSLRY+LVDGQGNFGS+DGD+ AAMRYTEV
Sbjct 67 SARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDAPAAMRYTEV 126
Query 124 RMTKLTHELLADLEKDTVDWVDNYDGSERIPDVLPTRIPNLLINGAAGIAVGMATNMAPH 183
RM K+T LL DL+K+TV++ NYDG IPDVLPTRIP LL NG++GIAVGMATN+ PH
Sbjct 127 RMQKITQALLTDLDKETVNFSPNYDGELMIPDVLPTRIPALLANGSSGIAVGMATNIPPH 186
Query 184 HLNEVIHACLAYADNPNISIEGLMEHITGPDFPTGGIIYGKSGIVDAYRTGKGRLHIRGK 243
+LNEV++ CLAY D I+I+ LM+HI GPDFPT +I G+ GI +AYRTG+G++++R +
Sbjct 187 NLNEVLNGCLAYIDKNEITIDELMQHIPGPDFPTAALINGRKGIEEAYRTGRGKVYVRAR 246
Query 244 YHFEEDEKTGRTTIVFTEIPYQVNKARVIERIAELVKEKKLEGISELRDESDKDGMRIAI 303
E +EK GR I+ +E+PYQVNKA+++E+IAEL++EKK+EGIS + D S+K+G+RI I
Sbjct 247 ATVETNEK-GREQIIVSELPYQVNKAKLVEKIAELIREKKIEGISNITDLSNKEGIRIEI 305
Query 304 DLKRGENAEVIVNNLFLNTQLENSFSINMVCLDNGQPKLMNLKDIIAAFIRHRQEVVTRR 363
D+KR EV++N+L+ TQ++ +F INMV LD+GQP+L NLK+II AF+ HR+EVVTRR
Sbjct 306 DIKRDAVGEVVLNHLYSLTQMQVTFGINMVALDHGQPRLFNLKEIIEAFVLHRREVVTRR 365
Query 364 TMFELRKARERGHILEGLTVALANIDDIIETIKTSANPAEARERLQAGEWA-GGGVIALL 422
++FELRKARER HILEGL VA +NID++I I+ S N EA + + W +I LL
Sbjct 366 SIFELRKARERTHILEGLAVARSNIDEMIAIIRNSKNREEAATSISSRSWTLHSDIINLL 425
Query 423 EKAGSVSVRPDEIEGEDPARPFGLSEQVYRLSPTQVAAILELRLHRLTGLEQDKLHAEYT 482
+ S RPDE+E G+ + Y LSP QV AILELRLHRLTG+ +++ EY
Sbjct 426 D----ASARPDELE-----ENLGIQGEQYYLSPAQVNAILELRLHRLTGIAFEEVIKEYE 476
Query 483 EILGQIAELTAILNDFNLLMGVIREELSLILQQYGDERRTQIVESRIDFCREDLIPEEQV 542
E+L +IA+L IL+ LM VIREEL + Q+GD+R T+I + D EDLI +E V
Sbjct 477 ELLVKIADLLHILSSAERLMEVIREELEEVKAQFGDDRLTEITAASGDIDLEDLIAQEDV 536
Query 543 VLTVSQTGYAKTQPLSDYQAQRRGGRGKSATSMKDDDIIQHLIVASNHATVLCFTNVGKV 602
V+T+S GY K QPL+DY+AQRRGG+GKSAT MK++D I+ L+VA+ H T+LCF++ G++
Sbjct 537 VVTLSHEGYVKYQPLTDYEAQRRGGKGKSATKMKEEDFIEKLLVANTHDTILCFSSRGRL 596
Query 603 YRLKVFEVPQASRGAKGRPMVNLLPLDANESITAILPLTEFLENHYVFMATASGTVKRVE 662
Y LKV+++PQASRGA+GRP+VN+LPL NE ITAILP++ + E+ +V MATA G VK++
Sbjct 597 YWLKVYQLPQASRGARGRPIVNILPLQENERITAILPVSAYEEDKFVVMATAGGIVKKIA 656
Query 663 LEQFANIRSNGLRAIELNEEDTLIGVAITDGQQQIMLFSNEGKAIRFAETDVRAMGRTAK 722
L +F+ RSNG+ A+ L +ED LIGV ITDG +IMLFS++G+ +RFAE VRAMGR A
Sbjct 657 LTEFSRPRSNGIIALNLRDEDELIGVDITDGSNEIMLFSSQGRVVRFAENAVRAMGRLAT 716
Query 723 GVRGMRVTLAAAVDSEDTELDHDEL-DDSEESTDSSVVSRIVSLVVVPETGEVLCASANG 781
GVRG+++ L + +++ ++ +++ DD+ E++ + ++VSLVV G +L A+ NG
Sbjct 717 GVRGIKLALTNDISDDESAVEIEDISDDNAEASLDLNIDKVVSLVVPKGEGAILTATQNG 776
Query 782 YGKRTPVNDFPTKKRGGKGVIAIKTSERNGELVGAVSIDGTKELMLISDGGTLVRTRAAE 841
YGKRT ++++PTK R KGVI+IK SERNG++V A ++ T ++MLI+D GTLVRTR +E
Sbjct 777 YGKRTQLSEYPTKSRNTKGVISIKVSERNGKVVAATQVEETDQIMLITDAGTLVRTRVSE 836
Query 842 VAMTGRNAQGVRLIRLSDAETLVGVVSIEAVEDDEFIEVVEEIATE 887
V++ GRN QGVRLIR +D E VVS+E V D + + +EE ++E
Sbjct 837 VSIVGRNTQGVRLIRTADDE---HVVSLERVCDADEDDSLEESSSE 879
Score = 56.6 bits (135), Expect = 6e-11
Identities = 52/222 (23%), Positives = 94/222 (42%), Gaps = 33/222 (15%)
Query 673 GLRAIELNEEDTLIGVAITDGQQQIMLFSNEGKAIRFAETDVRAMGRTAKGVRGMRVTLA 732
G A ++ EED + + + + I+ FS+ G R V + + ++G RG +
Sbjct 563 GKSATKMKEEDFIEKLLVANTHDTILCFSSRG---RLYWLKVYQLPQASRGARGRPIVNI 619
Query 733 AAVDSEDTELDHDELDDSEESTDSSVVSRIVSLVVVPETGEVLCASANGYGKRTPVNDFP 792
+ + ++ I+ + E V+ A+A G K+ + +F
Sbjct 620 LPLQENER------------------ITAILPVSAYEEDKFVVMATAGGIVKKIALTEFS 661
Query 793 TKKRGGKGVIAIKTSERNGELVGAVSIDGTKELMLISDGGTLVRTRAAEVAMTGRNAQGV 852
+ G+IA+ + + EL+G DG+ E+ML S G +VR V GR A GV
Sbjct 662 RPR--SNGIIALNLRDED-ELIGVDITDGSNEIMLFSSQGRVVRFAENAVRAMGRLATGV 718
Query 853 RLIRLSDAETLVGVVSIEAVEDDEFIEVVEEIATESEITEVD 894
R I+L+ + DDE +E+I+ ++ +D
Sbjct 719 RGIKLALTND---------ISDDESAVEIEDISDDNAEASLD 751
>P57277 DNA gyrase subunit A [Buchnera aphidicola subsp. Acyrthosiphon
pisum (strain APS)]
Length=830
Score = 905 bits (2338), Expect = 0.0
Identities = 465/865 (54%), Positives = 618/865 (71%), Gaps = 51/865 (6%)
Query 5 EIRPIAIEDELKHSYLDYAMSVIVSRALPDVRDGLKPVHRRVLYAMHELGNDYNKAYKKS 64
EI + IE+ELK SYLDY+MSVIV RALPDVRDGLKPVHRR+L+AM+ L ND+NKAYKKS
Sbjct 7 EIIQVNIEEELKSSYLDYSMSVIVGRALPDVRDGLKPVHRRILFAMYILNNDWNKAYKKS 66
Query 65 ARVVGDVIGKYHPHGDTAVYDTIVRMAQDFSLRYLLVDGQGNFGSVDGDSAAAMRYTEVR 124
AR+VGDVIGKYHPHGD+AVYD IVRMAQ FSLRY+L+DGQGNFGSVDGDSAAAMRYTEVR
Sbjct 67 ARIVGDVIGKYHPHGDSAVYDAIVRMAQKFSLRYMLIDGQGNFGSVDGDSAAAMRYTEVR 126
Query 125 MTKLTHELLADLEKDTVDWVDNYDGSERIPDVLPTRIPNLLINGAAGIAVGMATNMAPHH 184
M+K+ HELL DLEK+TV+++ NYDG+E IP++LP +IPNLLING++GIAVGMATN+ PH+
Sbjct 127 MSKIAHELLNDLEKNTVEFLPNYDGTEYIPEILPAKIPNLLINGSSGIAVGMATNIPPHN 186
Query 185 LNEVIHACLAYADNPNISIEGLMEHITGPDFPTGGIIYGKSGIVDAYRTGKGRLHIRGKY 244
LNEVI+ CLAY DN +I++E L++HI GPDFPT II GKSGI +AYRTGKG+++IR +
Sbjct 187 LNEVINGCLAYIDNNDITLEELIKHIPGPDFPTAAIINGKSGIEEAYRTGKGKIYIRAQN 246
Query 245 HFEEDEKTGRTTIVFTEIPYQVNKARVIERIAELVKEKKLEGISELRDESDKDGMRIAID 304
E+++K + +IVF EIPYQVNK+R+IE+IAELVKEK+++GI+ LRDESDKDGMRI I+
Sbjct 247 QIEKNKKNKKESIVFNEIPYQVNKSRLIEKIAELVKEKRIDGITALRDESDKDGMRIVIE 306
Query 305 LKRGENAEVIVNNLFLNTQLENSFSINMVCLDNGQPKLMNLKDIIAAFIRHRQEVVTRRT 364
+KR AEVI+N L+ TQL+ SF INMV L GQPK ++LK+I+ F+ HRQE++ RR+
Sbjct 307 IKREAIAEVILNQLYSLTQLQISFGINMVALCQGQPKTLSLKEILKNFLSHRQEIIIRRS 366
Query 365 MFELRKARERGHILEGLTVALANIDDIIETIKTSANPAEARERLQAGEWAGGGVIALLEK 424
+FEL K R R HILEGL +AL NI+ IIE IK S N +A++ + W + L +K
Sbjct 367 LFELNKVRNRIHILEGLNMALININAIIEIIKNSVNSIDAKKIIIQKNWKSEKINYLAKK 426
Query 425 AGSVSVRPDEIEGEDPARPFGLSEQVYRLSPTQVAAILELRLHRLTGLEQDKLHAEYTEI 484
Y S Q AIL+LRLH++T LEQ+K+ E+ ++
Sbjct 427 ------------------------HEYYFSEKQAQAILDLRLHKITNLEQEKIIMEHNDL 462
Query 485 LGQIAELTAILNDFNLLMGVIREELSLILQQYGDERRTQIVESRIDFCREDLIPEEQVVL 544
+ + EL IL + + VI+ EL I + D+RRT+I E+ D EDLI +E VV+
Sbjct 463 IKKTKELKEILENPKKMFEVIKSELLSIQNNFSDKRRTKITENHSDINMEDLINQEDVVV 522
Query 545 TVSQTGYAKTQPLSDYQAQRRGGRGKSATSMKDDDIIQHLIVASNHATVLCFTNVGKVYR 604
T+S +GY K QPLSDY AQRRGG+GKSA +K++D I+ L++A+ H T+LCF++ G +Y
Sbjct 523 TLSHSGYVKYQPLSDYNAQRRGGKGKSAAKIKEEDFIESLVIANTHDTILCFSSRGILYW 582
Query 605 LKVFEVPQASRGAKGRPMVNLLPLDANESITAILPLTEFLENHYVFMATASGTVKRVELE 664
+KV+++P++SR A+GRP+VNLLPL E ITAILP+ ++ +N +FM TA G VK+ L
Sbjct 583 MKVYQLPESSRHARGRPIVNLLPLSPKERITAILPVHKYQDNLNIFMTTAHGIVKKSSLS 642
Query 665 QFANIRSNGLRAIELNEEDTLIGVAITDGQQQIMLFSNEGKAIRFAETDVRAMGRTAKGV 724
QF R G+ AI L+ D LIGVA+TDG IMLF+ GK ++F E VR MGRTA GV
Sbjct 643 QFKKPRFAGIIAINLHANDELIGVALTDGNNNIMLFTQNGKVVQFLENSVRTMGRTASGV 702
Query 725 RGMRVTLAAAVDSEDTELDHDELDDSEESTDSSVVSRIVSLVVVPETGEVLCASANGYGK 784
+G+++ + D ++VSL+V G +L A+ NGYGK
Sbjct 703 KGIKI----------------------KKND-----KVVSLIVPKNKGSILIATKNGYGK 735
Query 785 RTPVNDFPTKKRGGKGVIAIKTSERNGELVGAVSIDGTKELMLISDGGTLVRTRAAEVAM 844
RT ++DFP K R +GVI+IK +++NG+++GA+ + ++M+I+D GTLVR R +EV +
Sbjct 736 RTKISDFPIKSRATQGVISIKITKKNGKIIGAIQVIEKDQIMMITDAGTLVRIRVSEVGV 795
Query 845 TGRNAQGVRLIRLSDAETLVGVVSI 869
RN QGV LIR S E +V + I
Sbjct 796 LKRNTQGVILIRTSKNEKVVALQKI 820
>P48371 DNA gyrase subunit A [Neisseria gonorrhoeae]
Length=916
Score = 900 bits (2326), Expect = 0.0
Identities = 479/922 (52%), Positives = 639/922 (69%), Gaps = 46/922 (5%)
Query 5 EIRPIAIEDELKHSYLDYAMSVIVSRALPDVRDGLKPVHRRVLYAMHELGNDYNKAYKKS 64
E P+++EDE++ SYLDYAMSVIV RALPDVRDGLKPVHRRVLYAMHEL N++N AYKKS
Sbjct 15 ETLPVSLEDEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELKNNWNAAYKKS 74
Query 65 ARVVGDVIGKYHPHGDTAVYDTIVRMAQDFSLRYLLVDGQGNFGSVDGDSAAAMRYTEVR 124
AR+VGDVIGKYHPHGD+AVYDTIVRMAQ+F++RY+L+DGQGNFGSVDG +AAAMRYTE+R
Sbjct 75 ARIVGDVIGKYHPHGDSAVYDTIVRMAQNFAMRYVLIDGQGNFGSVDGLAAAAMRYTEIR 134
Query 125 MTKLTHELLADLEKDTVDWVDNYDGSERIPDVLPTRIPNLLINGAAGIAVGMATNMAPHH 184
M K++HE+LAD+E++TV++ NYDGSE P VLPTR P LL+NG++GIAVGMATN+ PH+
Sbjct 135 MAKISHEMLADIEEETVNFGPNYDGSEHEPLVLPTRFPTLLVNGSSGIAVGMATNIPPHN 194
Query 185 LNEVIHACLAYADNPNISIEGLMEHITGPDFPTGGIIYGKSGIVDAYRTGKGRLHIRGKY 244
L + I+ACL D P I+ L++ I PDFPTG IYG G+ + Y+TG+GR+ +RGK
Sbjct 195 LTDTINACLRLLDEPKTEIDELIDIIQAPDFPTGATIYGLGGVREGYKTGRGRVVMRGKT 254
Query 245 HFEEDEKTG-RTTIVFTEIPYQVNKARVIERIAELVKEKKLEGISELRDESDKDGMRIAI 303
H E K G R IV EIPYQVNKA+++E+I +LV+EK LEGISELRDESDK GMR+ I
Sbjct 255 HIEPIGKNGERERIVIDEIPYQVNKAKLVEKIGDLVREKTLEGISELRDESDKSGMRVVI 314
Query 304 DLKRGENAEVIVNNLFLNTQLENSFSINMVCLDNGQPKLMNLKDIIAAFIRHRQEVVTRR 363
+LKR ENAEV++N L+ T L++SF INMV L +GQP+L+NLK I++ F+RHR+EVVTRR
Sbjct 315 ELKRNENAEVVLNQLYKLTPLQDSFGINMVVLVDGQPRLLNLKQILSEFLRHRREVVTRR 374
Query 364 TMFELRKARERGHILEGLTVALANIDDIIETIKTSANPAEARERLQAGEWAGGGVIALLE 423
T+F L+KAR GHI E VAL+NID+II+ IK S N AEA+E+L A WA V +L
Sbjct 375 TLFRLKKARHEGHIAERKAVALSNIDEIIKLIKESPNAAEAKEKLLARPWASSLVEEMLT 434
Query 424 KAGSVSVRPDEIEGEDPARPFGLSEQVYRLSPTQVAAILELRLHRLTGLEQDKLHAEYTE 483
++G + + + E GL +Q Y LS Q AIL + L LTGL+Q ++ Y
Sbjct 435 RSG---LDLEMMRPEGLVANIGLKKQGYYLSEIQADAILRMSLRNLTGLDQKEIIESYKN 491
Query 484 ILGQIAELTAILNDFNLLMGVIREELSLILQQYGDERRTQIVESRIDFCREDLIPEEQVV 543
++G+I + IL+ + +IR+EL I YGDERR++I D EDLIP+ ++V
Sbjct 492 LMGKIIDFVDILSKPERITQIIRDELEEIKTNYGDERRSEINPFGGDIADEDLIPQREMV 551
Query 544 LTVSQTGYAKTQPLSDYQAQRRGGRGKSATSMKDDDIIQHLIVASNHATVLCFTNVGKVY 603
+T++ GY KTQP +DYQAQRRGGRGK A + KD+D I+ L VA+ H ++CFTN+GK +
Sbjct 552 VTLTHGGYIKTQPTTDYQAQRRGGRGKQAAATKDEDFIETLFVANTHDYLMCFTNLGKCH 611
Query 604 RLKVFEVPQASRGAKGRPMVNLLPLDANESITAILPLTEFLENHYVFMATASGTVKRVEL 663
+KV+++P+ R ++GRP+ N++ L+ E ++AIL + EF E+ YVF ATA G VK+V+L
Sbjct 612 WIKVYKLPEGGRNSRGRPINNVIQLEEGEKVSAILAVREFPEDQYVFFATAQGMVKKVQL 671
Query 664 EQFANIRSNGLRAIELNEEDTLIGVAITDGQQQIMLFSNEGKAIRFAETDVRAMGRTAKG 723
F N+R+ G++AI L E D L+G A T G IMLFSN GKAIRF E ++ A+
Sbjct 672 SAFKNVRAQGIKAIALKEGDYLVGAAQTGGADDIMLFSNLGKAIRFNEYWEKSGNDEAED 731
Query 724 VRGMRVTLAAAVDSEDTELDHDELDDSEESTDSS--------------------VVSRIV 763
A +++E ++ DE D+E + S +IV
Sbjct 732 ---------ADIETEISDDLEDETADNENTLPSGKNGVRPSGRGSGGLRGMRLPADGKIV 782
Query 764 SLVV-VPETGE----VLCASANGYGKRTPVNDFPTKKRGGKGVIAIKTSERNGELVGAVS 818
SL+ PET E VL A+ANGYGKRTP+ D+ K +GG+G IAI T ERNG+LV A
Sbjct 783 SLITFAPETEESGLQVLTATANGYGKRTPIADYSRKNKGGQGSIAINTGERNGDLVAATL 842
Query 819 IDGTKELMLISDGGTLVRTRAAEVAMTGRNAQGVRLIRLSDAETLVGVVSIEAVEDDEFI 878
+ T +LMLI+ GG L+RT+ ++ TGR A GV+LI L + ETL VS+E V +DE
Sbjct 843 VGETDDLMLITSGGVLIRTKVEQIRETGRAAAGVKLINLDEGETL---VSLERVAEDE-- 897
Query 879 EVVEEIATESEITEVDQPEIDS 900
E++ S I+ V +PE ++
Sbjct 898 ---SELSGASVISNVTEPEAEN 916
>Q8K9W2 DNA gyrase subunit A [Buchnera aphidicola subsp. Schizaphis
graminum (strain Sg)]
Length=825
Score = 896 bits (2316), Expect = 0.0
Identities = 461/865 (53%), Positives = 623/865 (72%), Gaps = 50/865 (6%)
Query 5 EIRPIAIEDELKHSYLDYAMSVIVSRALPDVRDGLKPVHRRVLYAMHELGNDYNKAYKKS 64
EI + IE ELK SYLDYAMSVIV RALPDVRDGLKPVHRR+L+AMH L N +NKAYKKS
Sbjct 7 EIVQVDIEKELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRILFAMHVLSNYWNKAYKKS 66
Query 65 ARVVGDVIGKYHPHGDTAVYDTIVRMAQDFSLRYLLVDGQGNFGSVDGDSAAAMRYTEVR 124
ARVVGDVIGKYHPHGD+AVYD+IVRMAQ+FSLRY+L+DGQGNFGS+DGD+AAAMRYTEVR
Sbjct 67 ARVVGDVIGKYHPHGDSAVYDSIVRMAQNFSLRYMLIDGQGNFGSIDGDAAAAMRYTEVR 126
Query 125 MTKLTHELLADLEKDTVDWVDNYDGSERIPDVLPTRIPNLLINGAAGIAVGMATNMAPHH 184
M+K++ ELLADLEK+TV+++ NYDG+E IP++LP++IPNLLING++GIAVGMATN+ PH+
Sbjct 127 MSKISQELLADLEKNTVEFIPNYDGTEHIPEILPSKIPNLLINGSSGIAVGMATNIPPHN 186
Query 185 LNEVIHACLAYADNPNISIEGLMEHITGPDFPTGGIIYGKSGIVDAYRTGKGRLHIRGKY 244
LNEVI CLAY + NI++ L++HI GPDFPT GII GK GI +AYRTGKG+++IR +
Sbjct 187 LNEVIDGCLAYIKDDNITLRELIQHIPGPDFPTAGIINGKKGIEEAYRTGKGKIYIRARN 246
Query 245 HFEEDEKTGRTTIVFTEIPYQVNKARVIERIAELVKEKKLEGISELRDESDKDGMRIAID 304
E+++K + +I+F EIPYQVNK+R+IE+IAELVKEK+++GI+ LRDESDKDGMRI ++
Sbjct 247 KIEKNKKNKKESIIFYEIPYQVNKSRLIEKIAELVKEKRIDGITALRDESDKDGMRIVVE 306
Query 305 LKRGENAEVIVNNLFLNTQLENSFSINMVCLDNGQPKLMNLKDIIAAFIRHRQEVVTRRT 364
+K+ +E+I+N L+ TQL+ SF INMV L GQPK ++LK+I+ F+ HR+E+VTRR+
Sbjct 307 IKKEAMSEIILNQLYSLTQLQISFGINMVALCQGQPKTLSLKEILKHFLSHREEIVTRRS 366
Query 365 MFELRKARERGHILEGLTVALANIDDIIETIKTSANPAEARERLQAGEWAGGGVIALLEK 424
+FEL K +R HILEGL++AL NI+ II+ IK + + EA+E + W
Sbjct 367 IFELDKTCKRSHILEGLSIALININCIIDLIKKAKSSLEAKELIIKKTW----------- 415
Query 425 AGSVSVRPDEIEGEDPARPFGLSEQVYRLSPTQVAAILELRLHRLTGLEQDKLHAEYTEI 484
+ ++I +D Y + QV AIL+LRLH+LT LE++KL EY +
Sbjct 416 ---IYKNSEKINQKD---------HDYHFTEEQVQAILDLRLHKLTSLEKNKLVLEYDCL 463
Query 485 LGQIAELTAILNDFNLLMGVIREELSLILQQYGDERRTQIVESRIDFCREDLIPEEQVVL 544
+I EL IL + + VIR+EL I +GD+RRT+I E+ D EDLI +E VV+
Sbjct 464 TKKIKELKKILKSRDRMREVIRDELVSIKNNFGDQRRTEITENNPDISIEDLINQEDVVV 523
Query 545 TVSQTGYAKTQPLSDYQAQRRGGRGKSATSMKDDDIIQHLIVASNHATVLCFTNVGKVYR 604
T+S +GY K QPLSDY AQ+RGG+GKSA +K++D I+ L+V + H T+LCF++ G +Y
Sbjct 524 TLSHSGYVKYQPLSDYNAQKRGGKGKSAAKIKEEDFIESLVVTNTHDTILCFSSRGILYW 583
Query 605 LKVFEVPQASRGAKGRPMVNLLPLDANESITAILPLTEFLENHYVFMATASGTVKRVELE 664
+KV+++P++SR AKGRP+VNLLPL E ITAILP+ EF +N +FMATA G VK+ L+
Sbjct 584 MKVYQLPESSRHAKGRPIVNLLPLSNKERITAILPIHEFKDNLNIFMATAQGIVKKSSLK 643
Query 665 QFANIRSNGLRAIELNEEDTLIGVAITDGQQQIMLFSNEGKAIRFAETDVRAMGRTAKGV 724
+F R G+ AI L D LIGV++T+G+ IMLF+ GK ++F E VR MGRTA GV
Sbjct 644 EFKKPRIAGIIAINLRANDELIGVSLTNGKNNIMLFTQNGKVVQFLENSVRTMGRTASGV 703
Query 725 RGMRVTLAAAVDSEDTELDHDELDDSEESTDSSVVSRIVSLVVVPETGEVLCASANGYGK 784
RG+++ S ++VSL+V + +L A+ NGYGK
Sbjct 704 RGIKI---------------------------SKNDKVVSLIVPYKKESILIATNNGYGK 736
Query 785 RTPVNDFPTKKRGGKGVIAIKTSERNGELVGAVSIDGTKELMLISDGGTLVRTRAAEVAM 844
RT + DFP K R +GVI+IK +++NG+++GA+ + ++M+I++ GTLVR RA+E+ +
Sbjct 737 RTKITDFPIKSRATQGVISIKITKKNGKIIGAIQVVEKDQIMMITNAGTLVRIRASEIGV 796
Query 845 TGRNAQGVRLIRLSDAETLVGVVSI 869
RN QGV LIR S E +V + I
Sbjct 797 LKRNTQGVILIRTSKNEKVVALQRI 821
>Q89AS3 DNA gyrase subunit A [Buchnera aphidicola subsp. Baizongia
pistaciae (strain Bp)]
Length=847
Score = 874 bits (2257), Expect = 0.0
Identities = 451/869 (52%), Positives = 622/869 (72%), Gaps = 34/869 (4%)
Query 5 EIRPIAIEDELKHSYLDYAMSVIVSRALPDVRDGLKPVHRRVLYAMHELGNDYNKAYKKS 64
EI I IEDELK+SYLDYAMSVI+ RALPDVRDGLKPVHRR+L+AM L ND+NK YKKS
Sbjct 7 EIIKIDIEDELKNSYLDYAMSVIIGRALPDVRDGLKPVHRRILFAMKVLNNDWNKTYKKS 66
Query 65 ARVVGDVIGKYHPHGDTAVYDTIVRMAQDFSLRYLLVDGQGNFGSVDGDSAAAMRYTEVR 124
AR+VGDVIGKYHPHGDTAVYD IVRMAQ FSLRY+L+DGQGNFGS+DGDSAAAMRYTE+R
Sbjct 67 ARIVGDVIGKYHPHGDTAVYDAIVRMAQPFSLRYVLIDGQGNFGSIDGDSAAAMRYTEIR 126
Query 125 MTKLTHELLADLEKDTVDWVDNYDGSERIPDVLPTRIPNLLINGAAGIAVGMATNMAPHH 184
M+K+ +ELL DL+K+TV + NYDG+E+IP+VLP +IPNLLING++GIAVGMATN+ PH+
Sbjct 127 MSKIAYELLNDLDKNTVSFFSNYDGTEKIPEVLPAKIPNLLINGSSGIAVGMATNIPPHN 186
Query 185 LNEVIHACLAYADNPNISIEGLMEHITGPDFPTGGIIYGKSGIVDAYRTGKGRLHIRGKY 244
+ EVI+ CLA+ D+ NI+++ LMEHI GPDFPT G+I GK GI AY+TGKG+++IR K
Sbjct 187 IKEVINGCLAFIDDQNITLKKLMEHIPGPDFPTAGLINGKRGIEKAYKTGKGKIYIRAKS 246
Query 245 HFEEDEKTGRTTIVFTEIPYQVNKARVIERIAELVKEKKLEGISELRDESDKDGMRIAID 304
E +KT + +I+ E+PYQVNKARVI+ IA LVKEKK+EGI+ LRDESDK+GMRI I+
Sbjct 247 IIEIQKKTKKKSIIIYELPYQVNKARVIKGIANLVKEKKIEGITTLRDESDKEGMRIVIE 306
Query 305 LKRGENAEVIVNNLFLNTQLENSFSINMVCLDNGQPKLMNLKDIIAAFIRHRQEVVTRRT 364
+K+ AE+I+N L+ TQLE SF INMV L +GQPK+M LK+I+ AFI HR++++ RR+
Sbjct 307 IKKETKAEIILNQLYSLTQLEISFGINMVALIHGQPKVMTLKEILNAFINHRRKIIMRRS 366
Query 365 MFELRKARERGHILEGLTVALANIDDIIETIKTSANPAEARERLQAGEW-AGGGVIALLE 423
+FEL K R++ HILEGL ++L NID II IK S+ EA+ +L+ W + +
Sbjct 367 LFELNKIRKKIHILEGLIISLDNIDLIINLIKKSSTLEEAKNKLKTYHWYSKHAQYTQIL 426
Query 424 KAGSVSVRPDEIEGEDPARPFGLSEQVYRLSPTQVAAILELRLHRLTGLEQDKLHAEYTE 483
K + S+ P + RP + Q + L+P Q+ AILELRL +LT LE KL +EY +
Sbjct 427 KKNAHSLTP----YDKKLRP--IDTQKFFLTPEQIQAILELRLQKLTHLEHKKLISEYKQ 480
Query 484 ILGQIAELTAILNDFNLLMGVIREELSLILQQYGDERRTQIVESRIDFCREDLIPEEQVV 543
+ L IL + N+L ++++EL I +GD+RRT+I + D DLI +E VV
Sbjct 481 LFKTSNNLENILKNNNILTKIMKDELIKIRDNFGDKRRTKINVNYSDINTSDLINKENVV 540
Query 544 LTVSQTGYAKTQPLSDYQAQRRGGRGKSATSMKDDDIIQHLIVASNHATVLCFTNVGKVY 603
+T+S +GY K Q LS Y+AQ+RGG+GK A K++D I++L+VA+ H +LCF++ G +Y
Sbjct 541 ITLSYSGYVKYQLLSSYEAQKRGGKGKLAVKTKEEDFIENLLVANTHDIILCFSSKGILY 600
Query 604 RLKVFEVPQASRGAKGRPMVNLLPLDANESITAILPLTEFLENHYVFMATASGTVKRVEL 663
+KV+++P+ASR A+GRP+VNLLPL +NE ITAILP++E+ ++ +FMAT+ G VK+ L
Sbjct 601 WMKVYQLPEASRHARGRPIVNLLPLSSNERITAILPISEYKDSINIFMATSKGMVKKTSL 660
Query 664 EQFANIRSNGLRAIELNEEDTLIGVAITDGQQQIMLFSNEGKAIRFAETDVRAMGRTAKG 723
+F R+ G+ AI L +D LIGV++T+G IMLF+ +GKA+ F+E VR GRTA G
Sbjct 661 YEFKKPRTKGIIAINLKADDELIGVSLTNGNNTIMLFTAQGKAVHFSEILVRKTGRTAIG 720
Query 724 VRGMRVTLAAAVDSEDTELDHDELDDSEESTDSSVVSRIVSLVVVPETGEVLCASANGYG 783
V+G+++ + ++VSLVV + G +L + +GYG
Sbjct 721 VQGIKIKKS---------------------------DKVVSLVVPKKHGNILLITEHGYG 753
Query 784 KRTPVNDFPTKKRGGKGVIAIKTSERNGELVGAVSIDGTKELMLISDGGTLVRTRAAEVA 843
KRT +++FP K R +G IA+K +++NG ++G + + ++++I++ GTLVRTR E+
Sbjct 754 KRTEIHEFPIKSRATQGTIAMKITKKNGIVIGTMQVVNQDQIIIITNAGTLVRTRVLEIG 813
Query 844 MTGRNAQGVRLIRLSDAETLVGVVSIEAV 872
+ GRN QGV +IR S E +V + A+
Sbjct 814 ILGRNTQGVIIIRTSKKEKVVALQKANAL 842
>P05653 DNA gyrase subunit A [Bacillus subtilis (strain 168)]
Length=821
Score = 822 bits (2124), Expect = 0.0
Identities = 435/881 (49%), Positives = 591/881 (67%), Gaps = 68/881 (8%)
Query 5 EIRPIAIEDELKHSYLDYAMSVIVSRALPDVRDGLKPVHRRVLYAMHELGNDYNKAYKKS 64
++R I I E++ S+LDYAMSVIVSRALPDVRDGLKPVHRR+LYAM++LG +K YKKS
Sbjct 8 QVREINISQEMRTSFLDYAMSVIVSRALPDVRDGLKPVHRRILYAMNDLGMTSDKPYKKS 67
Query 65 ARVVGDVIGKYHPHGDTAVYDTIVRMAQDFSLRYLLVDGQGNFGSVDGDSAAAMRYTEVR 124
AR+VG+VIGKYHPHGD+AVY+++VRMAQDF+ RY+LVDG GNFGSVDGDSAAAMRYTE R
Sbjct 68 ARIVGEVIGKYHPHGDSAVYESMVRMAQDFNYRYMLVDGHGNFGSVDGDSAAAMRYTEAR 127
Query 125 MTKLTHELLADLEKDTVDWVDNYDGSERIPDVLPTRIPNLLINGAAGIAVGMATNMAPHH 184
M+K++ E+L D+ KDT+D+ DNYDGSER P V+P+R PNLL+NGAAGIAVGMATN+ PH
Sbjct 128 MSKISMEILRDITKDTIDYQDNYDGSEREPVVMPSRFPNLLVNGAAGIAVGMATNIPPHQ 187
Query 185 LNEVIHACLAYADNPNISIEGLMEHITGPDFPTGGIIYGKSGIVDAYRTGKGRLHIRGKY 244
L E+I LA ++NP+I+I LME I GPDFPT G I G+SGI AY +G+G + IR K
Sbjct 188 LGEIIDGVLAVSENPDITIPELMEVIPGPDFPTAGQILGRSGIRKAYESGRGSITIRAKA 247
Query 245 HFEEDEKTGRTTIVFTEIPYQVNKARVIERIAELVKEKKLEGISELRDESDKDGMRIAID 304
E+ +G+ I+ TE+PYQVNKA++IE+IA+LV++KK+EGI++LRDESD+ GMRI I+
Sbjct 248 EIEQ-TSSGKERIIVTELPYQVNKAKLIEKIADLVRDKKIEGITDLRDESDRTGMRIVIE 306
Query 305 LKRGENAEVIVNNLFLNTQLENSFSINMVCLDNGQPKLMNLKDIIAAFIRHRQEVVTRRT 364
++R NA VI+NNL+ T L+ SF IN++ L +GQPK++ LK + ++ H++ V+ RRT
Sbjct 307 IRRDANANVILNNLYKQTALQTSFGINLLALVDGQPKVLTLKQCLEHYLDHQKVVIRRRT 366
Query 365 MFELRKARERGHILEGLTVALANIDDIIETIKTSANPAEARERLQAGEWAGGGVIALLEK 424
+ELRKA R HILEGL VAL ++D +I I+ S AR
Sbjct 367 AYELRKAEARAHILEGLRVALDHLDAVISLIRNSQTAEIART------------------ 408
Query 425 AGSVSVRPDEIEGEDPARPFGLSEQVYRLSPTQVAAILELRLHRLTGLEQDKLHAEYTEI 484
GL EQ + L+ Q AIL++RL RLTGLE++K+ EY +
Sbjct 409 --------------------GLIEQ-FSLTEKQAQAILDMRLQRLTGLEREKIEEEYQSL 447
Query 485 LGQIAELTAILNDFNLLMGVIREELSLILQQYGDERRTQIVESRIDFCR-EDLIPEEQVV 543
+ IAEL IL + ++ +IREEL+ I +++ DERRT+IV S ++ EDLI E +V
Sbjct 448 VKLIAELKDILANEYKVLEIIREELTEIKERFNDERRTEIVTSGLETIEDEDLIERENIV 507
Query 544 LTVSQTGYAKTQPLSDYQAQRRGGRGKSATSMKDDDIIQHLIVASNHATVLCFTNVGKVY 603
+T++ GY K P S Y++Q+RGG+G +DD ++HLI S H T+L F+N GKVY
Sbjct 508 VTLTHNGYVKRLPASTYRSQKRGGKGVQGMGTNEDDFVEHLISTSTHDTILFFSNKGKVY 567
Query 604 RLKVFEVPQASRGAKGRPMVNLLPLDANESITAILPLTEFLENHYVFMATASGTVKRVEL 663
R K +E+P+ R AKG P++NLL ++ E I AI+P+TEF Y+F T G KR L
Sbjct 568 RAKGYEIPEYGRTAKGIPIINLLEVEKGEWINAIIPVTEFNAELYLFFTTKHGVSKRTSL 627
Query 664 EQFANIRSNGLRAIELNEEDTLIGVAITDGQQQIMLFSNEGKAIRFAETDVRAMGRTAKG 723
QFANIR+NGL A+ L E+D L+GV +TDG +QI++ + G IRF ETDVR MGRTA G
Sbjct 628 SQFANIRNNGLIALSLREDDELMGVRLTDGTKQIIIGTKNGLLIRFPETDVREMGRTAAG 687
Query 724 VRGMRVTLAAAVDSEDTELDHDELDDSEESTDSSVVSRIVSLVVVPETGEVLCASANGYG 783
V+G+ + TD VV V + ++ E VL + GYG
Sbjct 688 VKGITL------------------------TDDDVV---VGMEILEEESHVLIVTEKGYG 720
Query 784 KRTPVNDFPTKKRGGKGVIAIKTSERNGELVGAVSIDGTKELMLISDGGTLVRTRAAEVA 843
KRTP ++ T+ RGGKG+ K +E NG+LV + G ++LM+I+ G L+R +++
Sbjct 721 KRTPAEEYRTQSRGGKGLKTAKITENNGQLVAVKATKGEEDLMIITASGVLIRMDINDIS 780
Query 844 MTGRNAQGVRLIRLSDAETLVGVVSIEAVEDDEFIEVVEEI 884
+TGR QGVRLIR+++ E + V +E E+DE E EE+
Sbjct 781 ITGRVTQGVRLIRMAEEEHVATVALVEKNEEDENEEEQEEV 821
>P20831 DNA gyrase subunit A [Staphylococcus aureus]
Length=889
Score = 798 bits (2061), Expect = 0.0
Identities = 435/920 (47%), Positives = 597/920 (65%), Gaps = 84/920 (9%)
Query 4 SEIRPIAIEDELKHSYLDYAMSVIVSRALPDVRDGLKPVHRRVLYAMHELGNDYNKAYKK 63
S I I E++ S+LDYAMSVIV+RALPDVRDGLKPVHRR+LY ++E G +K+YKK
Sbjct 7 SRINERNITSEMRESFLDYAMSVIVARALPDVRDGLKPVHRRILYGLNEQGMTPDKSYKK 66
Query 64 SARVVGDVIGKYHPHGDTAVYDTIVRMAQDFSLRYLLVDGQGNFGSVDGDSAAAMRYTEV 123
SAR+VGDV+GKYHPHGD+++Y+ +VRMAQDFS RY LVDGQGNFGS+DGD AAAMRYTE
Sbjct 67 SARIVGDVMGKYHPHGDSSIYEAMVRMAQDFSYRYPLVDGQGNFGSMDGDGAAAMRYTEA 126
Query 124 RMTKLTHELLADLEKDTVDWVDNYDGSERIPDVLPTRIPNLLINGAAGIAVGMATNMAPH 183
RMTK+T ELL D+ KDT+D++DNYDG+ER P VLP R PNLL NGA+GIAVGMATN+ PH
Sbjct 127 RMTKITLELLRDINKDTIDFIDNYDGNEREPSVLPARFPNLLANGASGIAVGMATNIPPH 186
Query 184 HLNEVIHACLAYADNPNISIEGLMEHITGPDFPTGGIIYGKSGIVDAYRTGKGRLHIRGK 243
+L E+I+ L+ + NP+ISI LME I GPDFPT G+I GKSGI AY TG+G + +R +
Sbjct 187 NLTELINGVLSLSKNPDISIAELMEDIEGPDFPTAGLILGKSGIRRAYETGRGSIQMRSR 246
Query 244 YHFEEDEKTGRTTIVFTEIPYQVNKARVIERIAELVKEKKLEGISELRDESD-KDGMRIA 302
EE GR IV TEIP+QVNKAR+IE+IAELV++KK++GI++LRDE+ + G+R+
Sbjct 247 AVIEE-RGGGRQRIVVTEIPFQVNKARMIEKIAELVRDKKIDGITDLRDETSLRTGVRVV 305
Query 303 IDLKRGENAEVIVNNLFLNTQLENSFSINMVCLDNGQPKLMNLKDIIAAFIRHRQEVVTR 362
ID+++ NA VI+NNL+ T L+ SF +NM+ L NG+PKL+NLK+ + ++ H++ VV R
Sbjct 306 IDVRKDANASVILNNLYKQTPLQTSFGVNMIALVNGRPKLINLKEALVHYLEHQKTVVRR 365
Query 363 RTMFELRKARERGHILEGLTVALANIDDIIETIKTSANPAEARERLQAGEWAGGGVIALL 422
RT + LRKA++R HILEGL +AL +ID+II TI+ S A E LQ
Sbjct 366 RTQYNLRKAKDRAHILEGLRIALDHIDEIISTIRESDTDKVAMESLQ------------- 412
Query 423 EKAGSVSVRPDEIEGEDPARPFGLSEQVYRLSPTQVAAILELRLHRLTGLEQDKLHAEYT 482
Q ++LS Q AIL++RL RLTGLE+DK+ AEY
Sbjct 413 --------------------------QRFKLSEKQAQAILDMRLRRLTGLERDKIEAEYN 446
Query 483 EILGQIAELTAILNDFNLLMGVIREELSLILQQYGDERRTQI-VESRIDFCREDLIPEEQ 541
E+L I+EL AIL D +L+ ++R+EL+ I ++GD+RRT+I + D EDLIPEEQ
Sbjct 447 ELLNYISELEAILADEEVLLQLVRDELTEIRDRFGDDRRTEIQLGGFEDLEDEDLIPEEQ 506
Query 542 VVLTVSQTGYAKTQPLSDYQAQRRGGRGKSATSMKDDDIIQHLIVASNHATVLCFTNVGK 601
+V+T+S Y K P+S Y+AQ RGGRG + ++D + L+ S H VL FTN G+
Sbjct 507 IVITLSHNNYIKRLPVSTYRAQNRGGRGVQGMNTLEEDFVSQLVTLSTHDHVLFFTNKGR 566
Query 602 VYRLKVFEVPQASRGAKGRPMVNLLPLDANESITAILPLTEF-LENHYVFMATASGTVKR 660
VY+LK +EVP+ SR +KG P+VN + L+ +E I+ ++ + + E++++ AT G VKR
Sbjct 567 VYKLKGYEVPELSRQSKGIPVVNAIELENDEVISTMIAVKDLESEDNFLVFATKRGVVKR 626
Query 661 VELEQFANIRSNGLRAIELNEEDTLIGVAITDGQQQIMLFSNEGKAIRFAETDVRAMGRT 720
L F+ I NG AI E+D LI V +T GQ+ I++ ++ IRF E+ +R +GRT
Sbjct 627 SALSNFSRINRNGKIAISFREDDELIAVRLTSGQEDILIGTSHASLIRFPESTLRPLGRT 686
Query 721 AKGVRGMRVTLAAAVDSEDTELDHDELDDSEESTDSSVVSRIVSLVVVPETGEVLCASAN 780
A GV+G+ T + DE+ + + +SV EVL + N
Sbjct 687 ATGVKGI------------TLREGDEVVGLDVAHANSV-------------DEVLVVTEN 721
Query 781 GYGKRTPVNDFPTKKRGGKGVIAIKTSERNGELVGAVSIDGTKELMLISDGGTLVRTRAA 840
GYGKRTPVND+ RGGKG+ +ERNG +V ++ G ++LM++++ G ++R A
Sbjct 722 GYGKRTPVNDYRLSNRGGKGIKTATITERNGNVVCITTVTGEEDLMIVTNAGVIIRLDVA 781
Query 841 EVAMTGRNAQGVRLIRLSDAETLVGVVSI------EAVEDDEFIEVVEEIATESEITEVD 894
+++ GR AQGVRLIRL D + + V + E ED++ V E TE + V
Sbjct 782 DISQNGRAAQGVRLIRLGDDQFVSTVAKVKEDAEDETNEDEQSTSTVSEDGTEQQREAVV 841
Query 895 QPE----------IDSESSD 904
E IDSE +D
Sbjct 842 NDETPGNAIHTEVIDSEEND 861
>Q2G2Q0 DNA gyrase subunit A [Staphylococcus aureus (strain NCTC
8325 / PS 47)]
Length=887
Score = 798 bits (2061), Expect = 0.0
Identities = 435/920 (47%), Positives = 597/920 (65%), Gaps = 84/920 (9%)
Query 4 SEIRPIAIEDELKHSYLDYAMSVIVSRALPDVRDGLKPVHRRVLYAMHELGNDYNKAYKK 63
S I I E++ S+LDYAMSVIV+RALPDVRDGLKPVHRR+LY ++E G +K+YKK
Sbjct 7 SRINERNITSEMRESFLDYAMSVIVARALPDVRDGLKPVHRRILYGLNEQGMTPDKSYKK 66
Query 64 SARVVGDVIGKYHPHGDTAVYDTIVRMAQDFSLRYLLVDGQGNFGSVDGDSAAAMRYTEV 123
SAR+VGDV+GKYHPHGD+++Y+ +VRMAQDFS RY LVDGQGNFGS+DGD AAAMRYTE
Sbjct 67 SARIVGDVMGKYHPHGDSSIYEAMVRMAQDFSYRYPLVDGQGNFGSMDGDGAAAMRYTEA 126
Query 124 RMTKLTHELLADLEKDTVDWVDNYDGSERIPDVLPTRIPNLLINGAAGIAVGMATNMAPH 183
RMTK+T ELL D+ KDT+D++DNYDG+ER P VLP R PNLL NGA+GIAVGMATN+ PH
Sbjct 127 RMTKITLELLRDINKDTIDFIDNYDGNEREPSVLPARFPNLLANGASGIAVGMATNIPPH 186
Query 184 HLNEVIHACLAYADNPNISIEGLMEHITGPDFPTGGIIYGKSGIVDAYRTGKGRLHIRGK 243
+L E+I+ L+ + NP+ISI LME I GPDFPT G+I GKSGI AY TG+G + +R +
Sbjct 187 NLTELINGVLSLSKNPDISIAELMEDIEGPDFPTAGLILGKSGIRRAYETGRGSIQMRSR 246
Query 244 YHFEEDEKTGRTTIVFTEIPYQVNKARVIERIAELVKEKKLEGISELRDESD-KDGMRIA 302
EE GR IV TEIP+QVNKAR+IE+IAELV++KK++GI++LRDE+ + G+R+
Sbjct 247 AVIEE-RGGGRQRIVVTEIPFQVNKARMIEKIAELVRDKKIDGITDLRDETSLRTGVRVV 305
Query 303 IDLKRGENAEVIVNNLFLNTQLENSFSINMVCLDNGQPKLMNLKDIIAAFIRHRQEVVTR 362
ID+++ NA VI+NNL+ T L+ SF +NM+ L NG+PKL+NLK+ + ++ H++ VV R
Sbjct 306 IDVRKDANASVILNNLYKQTPLQTSFGVNMIALVNGRPKLINLKEALVHYLEHQKTVVRR 365
Query 363 RTMFELRKARERGHILEGLTVALANIDDIIETIKTSANPAEARERLQAGEWAGGGVIALL 422
RT + LRKA++R HILEGL +AL +ID+II TI+ S A E LQ
Sbjct 366 RTQYNLRKAKDRAHILEGLRIALDHIDEIISTIRESDTDKVAMESLQ------------- 412
Query 423 EKAGSVSVRPDEIEGEDPARPFGLSEQVYRLSPTQVAAILELRLHRLTGLEQDKLHAEYT 482
Q ++LS Q AIL++RL RLTGLE+DK+ AEY
Sbjct 413 --------------------------QRFKLSEKQAQAILDMRLRRLTGLERDKIEAEYN 446
Query 483 EILGQIAELTAILNDFNLLMGVIREELSLILQQYGDERRTQI-VESRIDFCREDLIPEEQ 541
E+L I+EL AIL D +L+ ++R+EL+ I ++GD+RRT+I + D EDLIPEEQ
Sbjct 447 ELLNYISELEAILADEEVLLQLVRDELTEIRDRFGDDRRTEIQLGGFEDLEDEDLIPEEQ 506
Query 542 VVLTVSQTGYAKTQPLSDYQAQRRGGRGKSATSMKDDDIIQHLIVASNHATVLCFTNVGK 601
+V+T+S Y K P+S Y+AQ RGGRG + ++D + L+ S H VL FTN G+
Sbjct 507 IVITLSHNNYIKRLPVSTYRAQNRGGRGVQGMNTLEEDFVSQLVTLSTHDHVLFFTNKGR 566
Query 602 VYRLKVFEVPQASRGAKGRPMVNLLPLDANESITAILPLTEF-LENHYVFMATASGTVKR 660
VY+LK +EVP+ SR +KG P+VN + L+ +E I+ ++ + + E++++ AT G VKR
Sbjct 567 VYKLKGYEVPELSRQSKGIPVVNAIELENDEVISTMIAVKDLESEDNFLVFATKRGVVKR 626
Query 661 VELEQFANIRSNGLRAIELNEEDTLIGVAITDGQQQIMLFSNEGKAIRFAETDVRAMGRT 720
L F+ I NG AI E+D LI V +T GQ+ I++ ++ IRF E+ +R +GRT
Sbjct 627 SALSNFSRINRNGKIAISFREDDELIAVRLTSGQEDILIGTSHASLIRFPESTLRPLGRT 686
Query 721 AKGVRGMRVTLAAAVDSEDTELDHDELDDSEESTDSSVVSRIVSLVVVPETGEVLCASAN 780
A GV+G+ T + DE+ + + +SV EVL + N
Sbjct 687 ATGVKGI------------TLREGDEVVGLDVAHANSV-------------DEVLVVTEN 721
Query 781 GYGKRTPVNDFPTKKRGGKGVIAIKTSERNGELVGAVSIDGTKELMLISDGGTLVRTRAA 840
GYGKRTPVND+ RGGKG+ +ERNG +V ++ G ++LM++++ G ++R A
Sbjct 722 GYGKRTPVNDYRLSNRGGKGIKTATITERNGNVVCITTVTGEEDLMIVTNAGVIIRLDVA 781
Query 841 EVAMTGRNAQGVRLIRLSDAETLVGVVSI------EAVEDDEFIEVVEEIATESEITEVD 894
+++ GR AQGVRLIRL D + + V + E ED++ V E TE + V
Sbjct 782 DISQNGRAAQGVRLIRLGDDQFVSTVAKVKEDAEDETNEDEQSTSTVSEDGTEQQREAVV 841
Query 895 QPE----------IDSESSD 904
E IDSE +D
Sbjct 842 NDETPGNAIHTEVIDSEEND 861
>Q8DPM2 DNA gyrase subunit A [Streptococcus pneumoniae (strain
ATCC BAA-255 / R6)]
Length=822
Score = 754 bits (1946), Expect = 0.0
Identities = 397/883 (45%), Positives = 566/883 (64%), Gaps = 76/883 (9%)
Query 9 IAIEDELKHSYLDYAMSVIVSRALPDVRDGLKPVHRRVLYAMHELGNDYNKAYKKSARVV 68
+ + E+K S++DYAMSVIV+RALPDVRDGLKPVHRR+LY M+ELG +K +KKSAR+
Sbjct 9 VNLTKEMKASFIDYAMSVIVARALPDVRDGLKPVHRRILYGMNELGVTPDKPHKKSARIT 68
Query 69 GDVIGKYHPHGDTAVYDTIVRMAQDFSLRYLLVDGQGNFGSVDGDSAAAMRYTEVRMTKL 128
GDV+GKYHPHGD+++Y+ +VRMAQ +S RY+LVDG GNFGS+DGDSAAA RYTE RM+K+
Sbjct 69 GDVMGKYHPHGDSSIYEAMVRMAQWWSYRYMLVDGHGNFGSMDGDSAAAQRYTEARMSKI 128
Query 129 THELLADLEKDTVDWVDNYDGSERIPDVLPTRIPNLLINGAAGIAVGMATNMAPHHLNEV 188
E+L D+ K+TVD+VDNYD +ER P VLP R PNLL+NGA GIAVGMATN+ PH+L E
Sbjct 129 ALEMLRDINKNTVDFVDNYDANEREPLVLPARFPNLLVNGATGIAVGMATNIPPHNLGET 188
Query 189 IHACLAYADNPNISIEGLMEHITGPDFPTGGIIYGKSGIVDAYRTGKGRLHIRGKYHFEE 248
I A DNP ++ + LME + GPDFPTG ++ GKSGI AY TGKG + +R + E
Sbjct 189 IDAVKLVMDNPEVTTKDLMEVLPGPDFPTGALVMGKSGIHKAYETGKGSIVLRSRTEI-E 247
Query 249 DEKTGRTTIVFTEIPYQVNKARVIERIAELVKEKKLEGISELRDESDKDGMRIAIDLKRG 308
KTGR IV TE PY VNK +V E I LV+EK++EGI+ +RDES+++G+R I++KR
Sbjct 248 TTKTGRERIVVTEFPYMVNKTKVHEHIVRLVQEKRIEGITAVRDESNREGVRFVIEVKRD 307
Query 309 ENAEVIVNNLFLNTQLENSFSINMVCLDNGQPKLMNLKDIIAAFIRHRQEVVTRRTMFEL 368
+A VI+NNLF TQ++ +F NM+ + NG PK+++L+ I+ A+I H++EVV RRT F+
Sbjct 308 ASANVILNNLFKMTQMQTNFGFNMLAIQNGIPKILSLRQILDAYIEHQKEVVVRRTRFDK 367
Query 369 RKARERGHILEGLTVALANIDDIIETIKTSANPAEARERLQAGEWAGGGVIALLEKAGSV 428
KA R HILEGL +AL +ID++I I+ S AEA+ L +
Sbjct 368 EKAEARAHILEGLLIALDHIDEVIRIIRASETDAEAQAELMS------------------ 409
Query 429 SVRPDEIEGEDPARPFGLSEQVYRLSPTQVAAILELRLHRLTGLEQDKLHAEYTEILGQI 488
++LS Q AIL++RL RLTGLE+DK+ +EY ++L I
Sbjct 410 ---------------------KFKLSERQSQAILDMRLRRLTGLERDKIQSEYDDLLALI 448
Query 489 AELTAILNDFNLLMGVIREELSLILQQYGDERRTQIVESRI-DFCREDLIPEEQVVLTVS 547
A+L IL + +I++EL + +++ D+RRT+++ ++ EDLI E V++T+S
Sbjct 449 ADLADILAKPERVSQIIKDELDEVKRKFSDKRRTELMVGQVLSLEDEDLIEESDVLITLS 508
Query 548 QTGYAKTQPLSDYQAQRRGGRGKSATSMKDDDIIQHLIVASNHATVLCFTNVGKVYRLKV 607
GY K ++ AQ+RGGRG T +KDDD ++ L+ S H +L FTN G+VYRLK
Sbjct 509 NRGYIKRLDQDEFTAQKRGGRGVQGTGVKDDDFVRELVSTSTHDHLLFFTNKGRVYRLKG 568
Query 608 FEVPQASRGAKGRPMVNLLPLDANESITAILPL-TEFLENHYVFMATASGTVKRVELEQF 666
+E+P+ R AKG P+VNLL LD +ESI ++ + ++ ++ Y+F T G VKR +++F
Sbjct 569 YEIPEYGRTAKGLPVVNLLKLDEDESIQTVINVESDRSDDAYLFFTTRHGIVKRTSVKEF 628
Query 667 ANIRSNGLRAIELNEEDTLIGVAITDGQQQIMLFSNEGKAIRFAETDVRAMGRTAKGVRG 726
ANIR NGL+A+ L +ED LI V + +G I++ + G A+RF ++ VR M R A GV+G
Sbjct 629 ANIRQNGLKALNLKDEDELINVLLAEGDMDIIIGTKFGYAVRFNQSAVRGMSRIATGVKG 688
Query 727 MRVTLAAAVDSEDTELDHDELDDSEESTDSSVVSRIVSLVVVPETGEVLCASANGYGKRT 786
+ + DT +V ++ + EVL + GYGKRT
Sbjct 689 VNLR------EGDT---------------------VVGASLITDQDEVLIITEKGYGKRT 721
Query 787 PVNDFPTKKRGGKGVIAIKTSERNGELVGAVSIDGTKELMLISDGGTLVRTRAAEVAMTG 846
++PTK RGGKG+ K +E+NG L G +++ G ++LM+I+D G ++RT A ++ TG
Sbjct 722 VATEYPTKGRGGKGMQTAKITEKNGLLAGLMTVQGDEDLMIITDTGVMIRTNLANISQTG 781
Query 847 RNAQGVRLIRLSDAETLVGVVSIEAVEDDEFIEVVEEIATESE 889
R GV+++RL +V ++ E EE+ TE+E
Sbjct 782 RATMGVKVMRLDQDAQIVTFTTVAVAEK-------EEVGTENE 817
Lambda K H a alpha
0.317 0.135 0.373 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 10983296
Database: 93209265ebf951268262013eebe67abd.SwissProt.fasta
Posted date: May 20, 2024 8:46 AM
Number of letters in database: 13,944
Number of sequences in database: 16
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
