BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: bcce841aaea7ca4aab0c45fdbb668059.SwissProt.fasta
           1 sequences; 172 total letters



Query= ACIAD2653

Length=176
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

Q02886 Protein DinB [Bacillus subtilis (strain 168)]                  58.5    5e-16


>Q02886 Protein DinB [Bacillus subtilis (strain 168)]
Length=172

 Score = 58.5 bits (140),  Expect = 5e-16
 Identities = 40/139 (29%), Positives = 69/139 (50%), Gaps = 7/139 (5%)

Query  15   YNQWANQKLFAALSNLTEAQLNQDGGAYFRTVLHTANHLLIGDILWFERIRGLEPSN-YA  73
            YN WANQ++F  L  L +   +Q+  + F ++ H  +H+ + D+ W E   G   S+  A
Sbjct  11   YNVWANQQIFNRLKELPKEIYHQEIQSVFPSISHVLSHVYLSDLGWIEVFSGKTLSDALA  70

Query  74   LDDLI--YTELKQLKQAR---FELDVRLLDLIMQSEPIKFDHFIKYLRRGQFYTEPLHEI  128
            L + +   TE K++++       L  R +  + Q E +     I+    G   T  + E+
Sbjct  71   LAEQLKEQTEAKEIEEMEDLFLRLSERYILFLQQKEQLNKPLQIQNPSSGIMKT-TVSEL  129

Query  129  LAHIFNHQAHHRGQMHSML  147
            L H+ NH  +HRG + +ML
Sbjct  130  LPHVVNHGTYHRGNITAML  148



Lambda      K        H        a         alpha
   0.331    0.143    0.438    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 24021


  Database: bcce841aaea7ca4aab0c45fdbb668059.SwissProt.fasta
    Posted date:  May 29, 2024  11:51 PM
  Number of letters in database: 172
  Number of sequences in database:  1



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40