BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 9e56a25b951d0e239f5668aa5957363c.SwissProt.fasta
22 sequences; 6,206 total letters
Query= ACIAD2659
Length=282
Score E
Sequences producing significant alignments: (Bits) Value
Q6F950 Diaminopimelate epimerase [Acinetobacter baylyi (strain AT... 572 0.0
B0VDN4 Diaminopimelate epimerase [Acinetobacter baumannii (strain... 512 0.0
B7I5Y5 Diaminopimelate epimerase [Acinetobacter baumannii (strain... 512 0.0
B7GY71 Diaminopimelate epimerase [Acinetobacter baumannii (strain... 512 0.0
B2HX82 Diaminopimelate epimerase [Acinetobacter baumannii (strain... 510 0.0
A3M804 Diaminopimelate epimerase [Acinetobacter baumannii (strain... 508 0.0
B0VT30 Diaminopimelate epimerase [Acinetobacter baumannii (strain... 507 0.0
Q82U84 Diaminopimelate epimerase [Nitrosomonas europaea (strain A... 344 2e-123
A4VGW5 Diaminopimelate epimerase [Stutzerimonas stutzeri (strain ... 330 1e-117
A4XNX4 Diaminopimelate epimerase [Pseudomonas mendocina (strain y... 329 2e-117
Q0AIP0 Diaminopimelate epimerase [Nitrosomonas eutropha (strain D... 329 3e-117
A1K306 Diaminopimelate epimerase [Azoarcus sp. (strain BH72)] 328 8e-117
Q51564 Diaminopimelate epimerase [Pseudomonas aeruginosa (strain ... 320 6e-114
P0A6K1 Diaminopimelate epimerase [Escherichia coli (strain K12)] 309 2e-109
O05322 Diaminopimelate epimerase [Pseudomonas fluorescens] 303 3e-107
P44859 Diaminopimelate epimerase [Haemophilus influenzae (strain ... 295 6e-104
P46357 Diaminopimelate epimerase [Yersinia pestis] 294 2e-103
Q9LFG2 Diaminopimelate epimerase, chloroplastic [Arabidopsis thal... 199 4e-65
D2Z026 O-ureido-serine racemase [Streptomyces lavendulae] 189 2e-62
Q46185 Diaminopimelate epimerase [Clostridium perfringens (strain... 164 1e-52
P54897 Diaminopimelate epimerase 2 [Nostoc sp. (strain PCC 7120 /... 156 1e-49
Q8NP73 Diaminopimelate epimerase [Corynebacterium glutamicum (str... 120 6e-36
>Q6F950 Diaminopimelate epimerase [Acinetobacter baylyi (strain
ATCC 33305 / BD413 / ADP1)]
Length=281
Score = 572 bits (1474), Expect = 0.0
Identities = 281/281 (100%), Positives = 281/281 (100%), Gaps = 0/281 (0%)
Query 1 MLLEFTKMHGLGNDFVVLDLISQRAYLDTTTIQRMADRHFGIGFDQLLIVEPPDYPNVDF 60
MLLEFTKMHGLGNDFVVLDLISQRAYLDTTTIQRMADRHFGIGFDQLLIVEPPDYPNVDF
Sbjct 1 MLLEFTKMHGLGNDFVVLDLISQRAYLDTTTIQRMADRHFGIGFDQLLIVEPPDYPNVDF 60
Query 61 KYRIFNADGSEVEQCGNGVRCFARFVHERQLTKKTKIKVQTKAGIVEPELGPNGWVRVNM 120
KYRIFNADGSEVEQCGNGVRCFARFVHERQLTKKTKIKVQTKAGIVEPELGPNGWVRVNM
Sbjct 61 KYRIFNADGSEVEQCGNGVRCFARFVHERQLTKKTKIKVQTKAGIVEPELGPNGWVRVNM 120
Query 121 GYPKFMPHEIPFVTEEFEALYTLELANEQSLKIDVVNMGNPHAVTIVPDVLTADVATMGP 180
GYPKFMPHEIPFVTEEFEALYTLELANEQSLKIDVVNMGNPHAVTIVPDVLTADVATMGP
Sbjct 121 GYPKFMPHEIPFVTEEFEALYTLELANEQSLKIDVVNMGNPHAVTIVPDVLTADVATMGP 180
Query 181 QVESHVRFPQRVNAGFMQIVDEKHIRLRVFERGVGETLACGTGACAAAVSGMRRGLLANE 240
QVESHVRFPQRVNAGFMQIVDEKHIRLRVFERGVGETLACGTGACAAAVSGMRRGLLANE
Sbjct 181 QVESHVRFPQRVNAGFMQIVDEKHIRLRVFERGVGETLACGTGACAAAVSGMRRGLLANE 240
Query 241 VEVELAGGKLQIAWQEGDVVWMTGPTANVYEGRLDLRYFQS 281
VEVELAGGKLQIAWQEGDVVWMTGPTANVYEGRLDLRYFQS
Sbjct 241 VEVELAGGKLQIAWQEGDVVWMTGPTANVYEGRLDLRYFQS 281
>B0VDN4 Diaminopimelate epimerase [Acinetobacter baumannii (strain
AYE)]
Length=281
Score = 512 bits (1318), Expect = 0.0
Identities = 245/280 (88%), Positives = 263/280 (94%), Gaps = 0/280 (0%)
Query 1 MLLEFTKMHGLGNDFVVLDLISQRAYLDTTTIQRMADRHFGIGFDQLLIVEPPDYPNVDF 60
MLLEFTKMHGLGNDF+V+DLISQRAYLDT TIQR+ADRHFG+GFDQLLIVEPPD P DF
Sbjct 1 MLLEFTKMHGLGNDFMVVDLISQRAYLDTATIQRLADRHFGVGFDQLLIVEPPDVPEADF 60
Query 61 KYRIFNADGSEVEQCGNGVRCFARFVHERQLTKKTKIKVQTKAGIVEPELGPNGWVRVNM 120
KYRIFNADGSEVEQCGNGVRCFARFVHER LT KT I VQTKAGIV+PELG NGWVRVNM
Sbjct 61 KYRIFNADGSEVEQCGNGVRCFARFVHERHLTNKTNITVQTKAGIVKPELGQNGWVRVNM 120
Query 121 GYPKFMPHEIPFVTEEFEALYTLELANEQSLKIDVVNMGNPHAVTIVPDVLTADVATMGP 180
GYPKF+P+EIPFV EE EALYTLELAN+Q++ IDVVNMGNPHAVTIVPDVLTADVA +GP
Sbjct 121 GYPKFLPNEIPFVAEEPEALYTLELANDQNISIDVVNMGNPHAVTIVPDVLTADVAGIGP 180
Query 181 QVESHVRFPQRVNAGFMQIVDEKHIRLRVFERGVGETLACGTGACAAAVSGMRRGLLANE 240
QVESH RFP+RVNAGFMQ++D+KH+RLRVFERGVGETLACGTGACAAAVSGMRRGLLAN
Sbjct 181 QVESHKRFPERVNAGFMQVIDDKHVRLRVFERGVGETLACGTGACAAAVSGMRRGLLANS 240
Query 241 VEVELAGGKLQIAWQEGDVVWMTGPTANVYEGRLDLRYFQ 280
VEVELAGGKLQI WQEGDVVWMTGPT +VY+GRLDLRYFQ
Sbjct 241 VEVELAGGKLQIEWQEGDVVWMTGPTTHVYDGRLDLRYFQ 280
>B7I5Y5 Diaminopimelate epimerase [Acinetobacter baumannii (strain
AB0057)]
Length=281
Score = 512 bits (1318), Expect = 0.0
Identities = 245/280 (88%), Positives = 263/280 (94%), Gaps = 0/280 (0%)
Query 1 MLLEFTKMHGLGNDFVVLDLISQRAYLDTTTIQRMADRHFGIGFDQLLIVEPPDYPNVDF 60
MLLEFTKMHGLGNDF+V+DLISQRAYLDT TIQR+ADRHFG+GFDQLLIVEPPD P DF
Sbjct 1 MLLEFTKMHGLGNDFMVVDLISQRAYLDTATIQRLADRHFGVGFDQLLIVEPPDVPEADF 60
Query 61 KYRIFNADGSEVEQCGNGVRCFARFVHERQLTKKTKIKVQTKAGIVEPELGPNGWVRVNM 120
KYRIFNADGSEVEQCGNGVRCFARFVHER LT KT I VQTKAGIV+PELG NGWVRVNM
Sbjct 61 KYRIFNADGSEVEQCGNGVRCFARFVHERHLTNKTNITVQTKAGIVKPELGQNGWVRVNM 120
Query 121 GYPKFMPHEIPFVTEEFEALYTLELANEQSLKIDVVNMGNPHAVTIVPDVLTADVATMGP 180
GYPKF+P+EIPFV EE EALYTLELAN+Q++ IDVVNMGNPHAVTIVPDVLTADVA +GP
Sbjct 121 GYPKFLPNEIPFVAEEPEALYTLELANDQNISIDVVNMGNPHAVTIVPDVLTADVAGIGP 180
Query 181 QVESHVRFPQRVNAGFMQIVDEKHIRLRVFERGVGETLACGTGACAAAVSGMRRGLLANE 240
QVESH RFP+RVNAGFMQ++D+KH+RLRVFERGVGETLACGTGACAAAVSGMRRGLLAN
Sbjct 181 QVESHKRFPERVNAGFMQVIDDKHVRLRVFERGVGETLACGTGACAAAVSGMRRGLLANS 240
Query 241 VEVELAGGKLQIAWQEGDVVWMTGPTANVYEGRLDLRYFQ 280
VEVELAGGKLQI WQEGDVVWMTGPT +VY+GRLDLRYFQ
Sbjct 241 VEVELAGGKLQIEWQEGDVVWMTGPTTHVYDGRLDLRYFQ 280
>B7GY71 Diaminopimelate epimerase [Acinetobacter baumannii (strain
AB307-0294)]
Length=281
Score = 512 bits (1318), Expect = 0.0
Identities = 245/280 (88%), Positives = 263/280 (94%), Gaps = 0/280 (0%)
Query 1 MLLEFTKMHGLGNDFVVLDLISQRAYLDTTTIQRMADRHFGIGFDQLLIVEPPDYPNVDF 60
MLLEFTKMHGLGNDF+V+DLISQRAYLDT TIQR+ADRHFG+GFDQLLIVEPPD P DF
Sbjct 1 MLLEFTKMHGLGNDFMVVDLISQRAYLDTATIQRLADRHFGVGFDQLLIVEPPDVPEADF 60
Query 61 KYRIFNADGSEVEQCGNGVRCFARFVHERQLTKKTKIKVQTKAGIVEPELGPNGWVRVNM 120
KYRIFNADGSEVEQCGNGVRCFARFVHER LT KT I VQTKAGIV+PELG NGWVRVNM
Sbjct 61 KYRIFNADGSEVEQCGNGVRCFARFVHERHLTNKTNITVQTKAGIVKPELGQNGWVRVNM 120
Query 121 GYPKFMPHEIPFVTEEFEALYTLELANEQSLKIDVVNMGNPHAVTIVPDVLTADVATMGP 180
GYPKF+P+EIPFV EE EALYTLELAN+Q++ IDVVNMGNPHAVTIVPDVLTADVA +GP
Sbjct 121 GYPKFLPNEIPFVAEEPEALYTLELANDQNISIDVVNMGNPHAVTIVPDVLTADVAGIGP 180
Query 181 QVESHVRFPQRVNAGFMQIVDEKHIRLRVFERGVGETLACGTGACAAAVSGMRRGLLANE 240
QVESH RFP+RVNAGFMQ++D+KH+RLRVFERGVGETLACGTGACAAAVSGMRRGLLAN
Sbjct 181 QVESHKRFPERVNAGFMQVIDDKHVRLRVFERGVGETLACGTGACAAAVSGMRRGLLANS 240
Query 241 VEVELAGGKLQIAWQEGDVVWMTGPTANVYEGRLDLRYFQ 280
VEVELAGGKLQI WQEGDVVWMTGPT +VY+GRLDLRYFQ
Sbjct 241 VEVELAGGKLQIEWQEGDVVWMTGPTTHVYDGRLDLRYFQ 280
>B2HX82 Diaminopimelate epimerase [Acinetobacter baumannii (strain
ACICU)]
Length=281
Score = 510 bits (1314), Expect = 0.0
Identities = 244/280 (87%), Positives = 263/280 (94%), Gaps = 0/280 (0%)
Query 1 MLLEFTKMHGLGNDFVVLDLISQRAYLDTTTIQRMADRHFGIGFDQLLIVEPPDYPNVDF 60
MLLEFTKMHGLGNDF+V+DLISQRAYLDT TIQR+ADRHFG+GFDQLLIVEPPD P DF
Sbjct 1 MLLEFTKMHGLGNDFMVVDLISQRAYLDTATIQRLADRHFGVGFDQLLIVEPPDVPEADF 60
Query 61 KYRIFNADGSEVEQCGNGVRCFARFVHERQLTKKTKIKVQTKAGIVEPELGPNGWVRVNM 120
KYRIFNADGSEVEQCGNGVRCFARFVHER LT KT I VQTKAGIV+PELG NGWVRVNM
Sbjct 61 KYRIFNADGSEVEQCGNGVRCFARFVHERHLTNKTNITVQTKAGIVKPELGQNGWVRVNM 120
Query 121 GYPKFMPHEIPFVTEEFEALYTLELANEQSLKIDVVNMGNPHAVTIVPDVLTADVATMGP 180
GYPKF+P+EIPFV EE +ALYTLELAN+Q++ IDVVNMGNPHAVTIVPDVLTADVA +GP
Sbjct 121 GYPKFLPNEIPFVAEEPKALYTLELANDQNISIDVVNMGNPHAVTIVPDVLTADVAGIGP 180
Query 181 QVESHVRFPQRVNAGFMQIVDEKHIRLRVFERGVGETLACGTGACAAAVSGMRRGLLANE 240
QVESH RFP+RVNAGFMQ++D+KH+RLRVFERGVGETLACGTGACAAAVSGMRRGLLAN
Sbjct 181 QVESHKRFPERVNAGFMQVIDDKHVRLRVFERGVGETLACGTGACAAAVSGMRRGLLANS 240
Query 241 VEVELAGGKLQIAWQEGDVVWMTGPTANVYEGRLDLRYFQ 280
VEVELAGGKLQI WQEGDVVWMTGPT +VY+GRLDLRYFQ
Sbjct 241 VEVELAGGKLQIEWQEGDVVWMTGPTTHVYDGRLDLRYFQ 280
>A3M804 Diaminopimelate epimerase [Acinetobacter baumannii (strain
ATCC 17978 / CIP 53.77 / LMG 1025 / NCDC KC755 / 5377)]
Length=281
Score = 508 bits (1309), Expect = 0.0
Identities = 243/280 (87%), Positives = 262/280 (94%), Gaps = 0/280 (0%)
Query 1 MLLEFTKMHGLGNDFVVLDLISQRAYLDTTTIQRMADRHFGIGFDQLLIVEPPDYPNVDF 60
MLLEFTKMHGLGNDF+V+DLISQRAYLDT TIQR+ADRHFG+GFDQLLIVEPPD P DF
Sbjct 1 MLLEFTKMHGLGNDFMVVDLISQRAYLDTATIQRLADRHFGVGFDQLLIVEPPDVPEADF 60
Query 61 KYRIFNADGSEVEQCGNGVRCFARFVHERQLTKKTKIKVQTKAGIVEPELGPNGWVRVNM 120
KYRIFNADGSEVEQCGNGVRCFARFVHER LT KT I VQTKAGIV+PELG NGWVRVNM
Sbjct 61 KYRIFNADGSEVEQCGNGVRCFARFVHERHLTNKTNITVQTKAGIVKPELGQNGWVRVNM 120
Query 121 GYPKFMPHEIPFVTEEFEALYTLELANEQSLKIDVVNMGNPHAVTIVPDVLTADVATMGP 180
GYPKF+P+EIPFV +E EALYTLELAN+Q++ IDVVNMGNPHAVTIVPDVLTADVA +GP
Sbjct 121 GYPKFLPNEIPFVADEPEALYTLELANDQNISIDVVNMGNPHAVTIVPDVLTADVAGIGP 180
Query 181 QVESHVRFPQRVNAGFMQIVDEKHIRLRVFERGVGETLACGTGACAAAVSGMRRGLLANE 240
QVE H RFP+RVNAGFMQ++D+KH+RLRVFERGVGETLACGTGACAAAVSGMRRGLLAN
Sbjct 181 QVELHKRFPERVNAGFMQVIDDKHVRLRVFERGVGETLACGTGACAAAVSGMRRGLLANS 240
Query 241 VEVELAGGKLQIAWQEGDVVWMTGPTANVYEGRLDLRYFQ 280
VEVELAGGKLQI WQEGDVVWMTGPT +VY+GRLDLRYFQ
Sbjct 241 VEVELAGGKLQIEWQEGDVVWMTGPTTHVYDGRLDLRYFQ 280
>B0VT30 Diaminopimelate epimerase [Acinetobacter baumannii (strain
SDF)]
Length=281
Score = 507 bits (1305), Expect = 0.0
Identities = 242/280 (86%), Positives = 262/280 (94%), Gaps = 0/280 (0%)
Query 1 MLLEFTKMHGLGNDFVVLDLISQRAYLDTTTIQRMADRHFGIGFDQLLIVEPPDYPNVDF 60
MLLEFTKMHGLGNDF+V+DLISQRAYLDT TIQR+ADRHFG+GFDQLLIVEPPD P DF
Sbjct 1 MLLEFTKMHGLGNDFMVVDLISQRAYLDTATIQRLADRHFGVGFDQLLIVEPPDVPEADF 60
Query 61 KYRIFNADGSEVEQCGNGVRCFARFVHERQLTKKTKIKVQTKAGIVEPELGPNGWVRVNM 120
KYRIFNADGSEVEQCGNGVRCFARFVHER LT KT I VQTKAGIV+PELG NGWVRVNM
Sbjct 61 KYRIFNADGSEVEQCGNGVRCFARFVHERHLTNKTNITVQTKAGIVKPELGQNGWVRVNM 120
Query 121 GYPKFMPHEIPFVTEEFEALYTLELANEQSLKIDVVNMGNPHAVTIVPDVLTADVATMGP 180
GYPKF+P+EIPFV +E EALYTLELAN+Q++ IDVVNMGNPHAVTIVPDVLTADVA +GP
Sbjct 121 GYPKFLPNEIPFVADEPEALYTLELANDQNISIDVVNMGNPHAVTIVPDVLTADVAGIGP 180
Query 181 QVESHVRFPQRVNAGFMQIVDEKHIRLRVFERGVGETLACGTGACAAAVSGMRRGLLANE 240
QVESH RFP+R+NAGFMQ++D+KH+RLRVFER VGETLACGTGACAAAVSGMRRGLLAN
Sbjct 181 QVESHKRFPERINAGFMQVIDDKHVRLRVFERCVGETLACGTGACAAAVSGMRRGLLANS 240
Query 241 VEVELAGGKLQIAWQEGDVVWMTGPTANVYEGRLDLRYFQ 280
VEVELAGGKLQI WQEGDVVWMTGPT +VY+GRLDLRYFQ
Sbjct 241 VEVELAGGKLQIEWQEGDVVWMTGPTTHVYDGRLDLRYFQ 280
>Q82U84 Diaminopimelate epimerase [Nitrosomonas europaea (strain
ATCC 19718 / CIP 103999 / KCTC 2705 / NBRC 14298)]
Length=275
Score = 344 bits (883), Expect = 2e-123
Identities = 170/277 (61%), Positives = 208/277 (75%), Gaps = 3/277 (1%)
Query 1 MLLEFTKMHGLGNDFVVLDLISQRAYLDTTTIQRMADRHFGIGFDQLLIVEPPDYPNVDF 60
M L+FTKMHGLGNDF+V+D I+Q LD TI+R ADRHFGIGFDQLL+VE P DF
Sbjct 1 MKLKFTKMHGLGNDFIVIDAINQSVSLDPATIRRWADRHFGIGFDQLLVVEKPGESG-DF 59
Query 61 KYRIFNADGSEVEQCGNGVRCFARFVHERQLTKKTKIKVQTKAGIVEPELGPNGWVRVNM 120
+YRIFNADG EVEQCGNG RCFARFV + LT+K I+V+T GI+ P + NG V V+M
Sbjct 60 RYRIFNADGGEVEQCGNGARCFARFVRDHDLTRKNTIRVETACGIIMPTVEENGEVSVDM 119
Query 121 GYPKFMPHEIPFVTEEFEALYTLELANEQSLKIDVVNMGNPHAVTIVPDVLTADVATMGP 180
G P+F P IPF+T+E Y L + N++ ++I V+MGNPHAV IVPD+ A V + GP
Sbjct 120 GIPRFDPARIPFITQERALTYPLNV-NDREIEISAVSMGNPHAVQIVPDIDLAPVTSEGP 178
Query 181 QVESHVRFPQRVNAGFMQIVDEKHIRLRVFERGVGETLACGTGACAAAVSGMRRGLLANE 240
+ESH FP++VNAG+MQIVD HIRLRVFERG GETLACGTGACAA VSG+ RGLL +E
Sbjct 179 AIESHPFFPEKVNAGYMQIVDRTHIRLRVFERGTGETLACGTGACAAVVSGISRGLLDSE 238
Query 241 VEVELAGGKLQIAWQ-EGDVVWMTGPTANVYEGRLDL 276
V+V + GG L+I W+ E VWMTGP +V+EG +DL
Sbjct 239 VQVTMRGGNLRIRWEGEDQPVWMTGPAVSVFEGTIDL 275
>A4VGW5 Diaminopimelate epimerase [Stutzerimonas stutzeri (strain
A1501)]
Length=276
Score = 330 bits (845), Expect = 1e-117
Identities = 160/277 (58%), Positives = 208/277 (75%), Gaps = 2/277 (1%)
Query 1 MLLEFTKMHGLGNDFVVLDLISQRAYLDTTTIQRMADRHFGIGFDQLLIVEPPDYPNVDF 60
MLL FTKMHGLGNDF+V+DL+SQ A++ ++ DRH G+GFDQLLIVEPP P+VDF
Sbjct 1 MLLRFTKMHGLGNDFMVIDLVSQHAHIQPKHAKQWGDRHTGVGFDQLLIVEPPQNPDVDF 60
Query 61 KYRIFNADGSEVEQCGNGVRCFARFVHERQLTKKTKIKVQTKAGIVEPELGPNGWVRVNM 120
+YRIFN+DGSEVEQCGNG RCFARFV +++LT K KIKV+TK GI+E ++ P+G +RV+M
Sbjct 61 RYRIFNSDGSEVEQCGNGARCFARFVVDKRLTVKRKIKVETKGGIIELDIRPDGQIRVDM 120
Query 121 GYPKFMPHEIPFVTEEFEALYTLELANEQSLKIDVVNMGNPHAVTIVPDVLTADVATMGP 180
G P+ +P EIPF E Y+LE+ +Q +++ +MGNPHAV V V A V +GP
Sbjct 121 GPPRLVPAEIPFQAEREALSYSLEVDGQQ-VELAAASMGNPHAVLRVDSVERAPVHELGP 179
Query 181 QVESHVRFPQRVNAGFMQIVDEKHIRLRVFERGVGETLACGTGACAAAVSGMRRGLLANE 240
++E H RFPQRVN GF+Q+VD +H RLRV+ERG GET ACGTGACAAAV+ +R+G + +
Sbjct 180 KIEHHPRFPQRVNVGFLQVVDRRHARLRVWERGAGETQACGTGACAAAVAAIRQGWMDSP 239
Query 241 VEVELAGGKLQIAWQ-EGDVVWMTGPTANVYEGRLDL 276
V++EL GG+L I W G V MTGP V+EG++ L
Sbjct 240 VQIELPGGRLSIEWAGPGQPVMMTGPAVRVFEGQVRL 276
>A4XNX4 Diaminopimelate epimerase [Pseudomonas mendocina (strain
ymp)]
Length=276
Score = 329 bits (844), Expect = 2e-117
Identities = 161/277 (58%), Positives = 211/277 (76%), Gaps = 2/277 (1%)
Query 1 MLLEFTKMHGLGNDFVVLDLISQRAYLDTTTIQRMADRHFGIGFDQLLIVEPPDYPNVDF 60
MLL FTKMHGLGNDF+VLDLISQ A++ ++ DRH G+GFDQLLIVEPP +P+VDF
Sbjct 1 MLLRFTKMHGLGNDFMVLDLISQHAHVQPKHAKQWGDRHTGVGFDQLLIVEPPSHPDVDF 60
Query 61 KYRIFNADGSEVEQCGNGVRCFARFVHERQLTKKTKIKVQTKAGIVEPELGPNGWVRVNM 120
+YRIFN+DGSEVEQCGNG RCFARFV +++LT K I+V+TK+G++E + +G V VNM
Sbjct 61 RYRIFNSDGSEVEQCGNGARCFARFVLDKRLTTKKTIRVETKSGVIELRVQNDGQVCVNM 120
Query 121 GYPKFMPHEIPFVTEEFEALYTLELANEQSLKIDVVNMGNPHAVTIVPDVLTADVATMGP 180
G P+ P ++PF E+ Y +++ QS+++ ++MGNPHAV V +V +A V T+GP
Sbjct 121 GAPRLEPAQVPFQAEQAALTYRVDVEG-QSVELAALSMGNPHAVLRVDNVDSAPVHTLGP 179
Query 181 QVESHVRFPQRVNAGFMQIVDEKHIRLRVFERGVGETLACGTGACAAAVSGMRRGLLANE 240
++E H RFPQRVN GF+Q++D KH RLRV+ERG GET ACGTGACAAAV+ +R+G + +
Sbjct 180 KLEHHPRFPQRVNVGFLQVLDRKHARLRVWERGAGETQACGTGACAAAVAAIRQGWMDSP 239
Query 241 VEVELAGGKLQIAWQ-EGDVVWMTGPTANVYEGRLDL 276
V++EL GGKL I W EG V MTGP A VYEG++ L
Sbjct 240 VQLELPGGKLSIEWAGEGQPVMMTGPAARVYEGQVRL 276
>Q0AIP0 Diaminopimelate epimerase [Nitrosomonas eutropha (strain
DSM 101675 / C91 / Nm57)]
Length=278
Score = 329 bits (843), Expect = 3e-117
Identities = 167/280 (60%), Positives = 205/280 (73%), Gaps = 6/280 (2%)
Query 1 MLLEFTKMHGLGNDFVVLDLISQRA---YLDTTTIQRMADRHFGIGFDQLLIVEPPDYPN 57
M L+FTKMHGLGNDF+V++ I+Q A +LD TI+R+ADRHFGIGFDQLLIVE
Sbjct 1 MKLQFTKMHGLGNDFIVINAINQPASLTFLDPATIRRLADRHFGIGFDQLLIVEQAREGG 60
Query 58 VDFKYRIFNADGSEVEQCGNGVRCFARFVHERQLTKKTKIKVQTKAGIVEPELGPNGWVR 117
DF+YRIFNADG EVEQCGNG RCFARFV + LT K I+V+T GI+ P + NG V
Sbjct 61 -DFRYRIFNADGGEVEQCGNGARCFARFVRDYNLTDKNTIRVETARGIITPTIENNGEVS 119
Query 118 VNMGYPKFMPHEIPFVTEEFEALYTLELANEQSLKIDVVNMGNPHAVTIVPDVLTADVAT 177
VNMG P+F P EIPF + +Y L++ +++++I V++GNPHAV I+PD+ A V T
Sbjct 120 VNMGVPQFEPAEIPFQAAQRMPVYPLQIG-DKTIEISAVSIGNPHAVQIIPDIDLAPVTT 178
Query 178 MGPQVESHVRFPQRVNAGFMQIVDEKHIRLRVFERGVGETLACGTGACAAAVSGMRRGLL 237
GP++E+H FP+RVNAGFMQI+D HIRLRVFERG GETLACGTGACAA V G+ RGLL
Sbjct 179 EGPKIEAHPLFPERVNAGFMQIIDRAHIRLRVFERGTGETLACGTGACAAVVCGILRGLL 238
Query 238 ANEVEVELAGGKLQIAWQEGD-VVWMTGPTANVYEGRLDL 276
V+V + GG LQI W D VWMTGP V+EG +DL
Sbjct 239 DTTVQVAMHGGNLQIRWDGKDKPVWMTGPAITVFEGTIDL 278
>A1K306 Diaminopimelate epimerase [Azoarcus sp. (strain BH72)]
Length=277
Score = 328 bits (840), Expect = 8e-117
Identities = 164/277 (59%), Positives = 201/277 (73%), Gaps = 2/277 (1%)
Query 1 MLLEFTKMHGLGNDFVVLDLISQRAYLDTTTIQRMADRHFGIGFDQLLIVEPPDYPNVDF 60
M + FTKMHGLGNDFVV+D L ++ +ADRHFG+G DQLL+VEPP VDF
Sbjct 1 MHIRFTKMHGLGNDFVVIDATRTPVDLTPARVKAIADRHFGVGCDQLLVVEPPGSDEVDF 60
Query 61 KYRIFNADGSEVEQCGNGVRCFARFVHERQLTKKTKIKVQTKAGIVEPELGPNGWVRVNM 120
+YRIFNADG EVEQCGNG RCF RFVH++ LT K +I+V+T+AG++ P L P+G V V+M
Sbjct 61 RYRIFNADGGEVEQCGNGARCFVRFVHDKGLTDKREIRVETRAGVIAPALRPDGLVSVDM 120
Query 121 GYPKFMPHEIPFVTEEFEALYTLELANEQSLKIDVVNMGNPHAVTIVPDVLTADVATMGP 180
G P+ P IPFV++ + L+LA E ++ I V+MGNPHAV +V DV TA VA G
Sbjct 121 GVPELSPARIPFVSDSDAWVQPLQLA-EDTVAITAVSMGNPHAVQVVADVDTAPVARQGA 179
Query 181 QVESHVRFPQRVNAGFMQIVDEKHIRLRVFERGVGETLACGTGACAAAVSGMRRGLLANE 240
++E H RFP RVNAGFMQ+VD HIRLRVFERG GETLACGTGACAA V+G+ RGLL +
Sbjct 180 EIECHPRFPARVNAGFMQVVDAGHIRLRVFERGAGETLACGTGACAAVVAGIGRGLLVSP 239
Query 241 VEVELAGGKLQIAWQ-EGDVVWMTGPTANVYEGRLDL 276
V VE GG+L+IAW G V MTGP V+EG L+L
Sbjct 240 VRVETRGGELEIAWAGPGTPVVMTGPAVTVFEGELEL 276
>Q51564 Diaminopimelate epimerase [Pseudomonas aeruginosa (strain
ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228
/ 1C / PRS 101 / PAO1)]
Length=276
Score = 320 bits (821), Expect = 6e-114
Identities = 159/277 (57%), Positives = 205/277 (74%), Gaps = 2/277 (1%)
Query 1 MLLEFTKMHGLGNDFVVLDLISQRAYLDTTTIQRMADRHFGIGFDQLLIVEPPDYPNVDF 60
MLL FTKMHGLGNDF+VLDL+SQ A++ ++ DR+ GIGFDQLLIVE P P+VDF
Sbjct 1 MLLRFTKMHGLGNDFMVLDLVSQHAHVQPKHVKLWGDRNTGIGFDQLLIVEAPSSPDVDF 60
Query 61 KYRIFNADGSEVEQCGNGVRCFARFVHERQLTKKTKIKVQTKAGIVEPELGPNGWVRVNM 120
+YRIFNADGSEVEQCGNG RCFARFV +++LT K I+V+TK GI+E + P+G V V+M
Sbjct 61 RYRIFNADGSEVEQCGNGARCFARFVQDKRLTVKKSIRVETKGGIIELNIRPDGQVTVDM 120
Query 121 GYPKFMPHEIPFVTEEFEALYTLELANEQSLKIDVVNMGNPHAVTIVPDVLTADVATMGP 180
G P+ P EIPF E Y +E+ N Q +++ V+MGNPH V V +V +A V ++GP
Sbjct 121 GPPRLAPAEIPFQAEREALSYEIEV-NGQRVELAAVSMGNPHGVLRVENVDSAPVHSLGP 179
Query 181 QVESHVRFPQRVNAGFMQIVDEKHIRLRVFERGVGETLACGTGACAAAVSGMRRGLLANE 240
Q+E H RFP++ N GF+Q++D H RLRV+ERGVGET ACGTGACAAAV+G+R+G L +
Sbjct 180 QLEVHPRFPKKANIGFLQVLDPHHARLRVWERGVGETQACGTGACAAAVAGIRQGWLQSP 239
Query 241 VEVELAGGKLQIAWQ-EGDVVWMTGPTANVYEGRLDL 276
V+++L GG+L I W G V MTGP VYEG++ L
Sbjct 240 VQIDLPGGRLHIEWAGPGQPVMMTGPAVRVYEGQVRL 276
>P0A6K1 Diaminopimelate epimerase [Escherichia coli (strain K12)]
Length=274
Score = 309 bits (791), Expect = 2e-109
Identities = 154/275 (56%), Positives = 195/275 (71%), Gaps = 2/275 (1%)
Query 3 LEFTKMHGLGNDFVVLDLISQRAYLDTTTIQRMADRHFGIGFDQLLIVEPPDYPNVDFKY 62
++F+KMHGLGNDF+V+D ++Q + I+R+ADRH G+GFDQLL+VEPP P +DF Y
Sbjct 1 MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60
Query 63 RIFNADGSEVEQCGNGVRCFARFVHERQLTKKTKIKVQTKAGIVEPELGPNGWVRVNMGY 122
RIFNADGSEV QCGNG RCFARFV + LT K I+V T G + + + VRVNMG
Sbjct 61 RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMGE 120
Query 123 PKFMPHEIPFVTEEFEALYTLELANEQSLKIDVVNMGNPHAVTIVPDVLTADVATMGPQV 182
P F P +PF + E Y + A EQ++ VV+MGNPH V V DV TA V T+GP +
Sbjct 121 PNFEPSAVPFRANKAEKTYIMRAA-EQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVL 179
Query 183 ESHVRFPQRVNAGFMQIVDEKHIRLRVFERGVGETLACGTGACAAAVSGMRRGLLANEVE 242
ESH RFP+R N GFMQ+V +HIRLRV+ERG GET ACG+GACAA G+++GLLA EV
Sbjct 180 ESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVR 239
Query 243 VELAGGKLQIAWQ-EGDVVWMTGPTANVYEGRLDL 276
VEL GG+L IAW+ G ++MTGP +VY+G + L
Sbjct 240 VELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274
>O05322 Diaminopimelate epimerase [Pseudomonas fluorescens]
Length=276
Score = 303 bits (777), Expect = 3e-107
Identities = 149/277 (54%), Positives = 203/277 (73%), Gaps = 2/277 (1%)
Query 1 MLLEFTKMHGLGNDFVVLDLISQRAYLDTTTIQRMADRHFGIGFDQLLIVEPPDYPNVDF 60
MLL FTKMHGLGNDF+VLDL+SQ A++ ++ DRH GIGFDQLLIVE P+ P+VDF
Sbjct 1 MLLRFTKMHGLGNDFMVLDLVSQHAHILPKHAKQWGDRHTGIGFDQLLIVEAPNNPDVDF 60
Query 61 KYRIFNADGSEVEQCGNGVRCFARFVHERQLTKKTKIKVQTKAGIVEPELGPNGWVRVNM 120
+YRIFNADGSEVEQCGNG RCFARFV +++LT K +I+V+TK+GI+E ++ +G + VNM
Sbjct 61 RYRIFNADGSEVEQCGNGARCFARFVLDKRLTAKRQIRVETKSGIIELDVRSDGQIGVNM 120
Query 121 GYPKFMPHEIPFVTEEFEALYTLELANEQSLKIDVVNMGNPHAVTIVPDVLTADVATMGP 180
G P+ +P +IPF Y +++ + ++++ V+MGNPHAV V D+ +A V +GP
Sbjct 121 GAPRLVPADIPFQAPAQALSYQVDV-DGATVELAAVSMGNPHAVLRVADINSAPVHELGP 179
Query 181 QVESHVRFPQRVNAGFMQIVDEKHIRLRVFERGVGETLACGTGACAAAVSGMRRGLLANE 240
++E H RFP RVN GF+Q++D +LRV+ERG GET ACGTGACAAAV+ + +G + +
Sbjct 180 KIEHHPRFPARVNVGFLQVIDRHRAQLRVWERGAGETQACGTGACAAAVAAISQGWMDSP 239
Query 241 VEVELAGGKLQIAWQ-EGDVVWMTGPTANVYEGRLDL 276
+ ++L GG+L I W G V MTGP VYEG++ L
Sbjct 240 LLIDLPGGRLSIEWAGPGQPVMMTGPAVRVYEGQVRL 276
>P44859 Diaminopimelate epimerase [Haemophilus influenzae (strain
ATCC 51907 / DSM 11121 / KW20 / Rd)]
Length=274
Score = 295 bits (755), Expect = 6e-104
Identities = 148/275 (54%), Positives = 194/275 (71%), Gaps = 2/275 (1%)
Query 3 LEFTKMHGLGNDFVVLDLISQRAYLDTTTIQRMADRHFGIGFDQLLIVEPPDYPNVDFKY 62
++F+KMHGLGNDFVV+D ++Q + TI+R+A+RH GIGFDQLLIVE P P +DF Y
Sbjct 1 MQFSKMHGLGNDFVVVDGVTQNVFFTPETIRRLANRHCGIGFDQLLIVEAPYDPELDFHY 60
Query 63 RIFNADGSEVEQCGNGVRCFARFVHERQLTKKTKIKVQTKAGIVEPELGPNGWVRVNMGY 122
RIFNADGSEV QCGNG RCFARFV + LT K I V T+ G + + + +RVNMG
Sbjct 61 RIFNADGSEVSQCGNGARCFARFVTLKGLTNKKDISVSTQKGNMVLTVKDDNQIRVNMGE 120
Query 123 PKFMPHEIPFVTEEFEALYTLELANEQSLKIDVVNMGNPHAVTIVPDVLTADVATMGPQV 182
P + P +IPF +FE Y L + Q++ V+MGNPH V V D+ TA+V +GP +
Sbjct 121 PIWEPAKIPFTANKFEKNYILR-TDIQTVLCGAVSMGNPHCVVQVDDIQTANVEQLGPLL 179
Query 183 ESHVRFPQRVNAGFMQIVDEKHIRLRVFERGVGETLACGTGACAAAVSGMRRGLLANEVE 242
ESH RFP+RVNAGFMQI++++HI+LRV+ERG GET ACG+GACAA G+ +GLL N V+
Sbjct 180 ESHERFPERVNAGFMQIINKEHIKLRVYERGAGETQACGSGACAAVAVGIMQGLLNNNVQ 239
Query 243 VELAGGKLQIAWQ-EGDVVWMTGPTANVYEGRLDL 276
V+L GG L I W G ++MTG ++Y+G + L
Sbjct 240 VDLPGGSLMIEWNGVGHPLYMTGEATHIYDGFITL 274
>P46357 Diaminopimelate epimerase [Yersinia pestis]
Length=274
Score = 294 bits (752), Expect = 2e-103
Identities = 148/275 (54%), Positives = 187/275 (68%), Gaps = 2/275 (1%)
Query 3 LEFTKMHGLGNDFVVLDLISQRAYLDTTTIQRMADRHFGIGFDQLLIVEPPDYPNVDFKY 62
++F+KMHGLGNDF+V+D ++Q Y I+R+ADRH G+GFDQ+L+VEPP P +DF Y
Sbjct 1 MQFSKMHGLGNDFMVVDAVTQNVYFSPELIRRLADRHTGVGFDQMLVVEPPYDPELDFHY 60
Query 63 RIFNADGSEVEQCGNGVRCFARFVHERQLTKKTKIKVQTKAGIVEPELGPNGWVRVNMGY 122
RIFNADGSEV QCGNG RCFARFV + LT K +I V T+ G + + + V VNMG
Sbjct 61 RIFNADGSEVSQCGNGARCFARFVRLKGLTNKREISVSTQTGRMILSVTEDEQVCVNMGE 120
Query 123 PKFMPHEIPFVTEEFEALYTLELANEQSLKIDVVNMGNPHAVTIVPDVLTADVATMGPQV 182
P F P +PF + E Y L A E ++ VV+MGNPH V V DV A+VA +GP +
Sbjct 121 PDFEPQTVPFRAAKAEKTYILRAA-EHTVLCGVVSMGNPHCVMQVDDVSVANVALLGPVL 179
Query 183 ESHVRFPQRVNAGFMQIVDEKHIRLRVFERGVGETLACGTGACAAAVSGMRRGLLANEVE 242
E+H RFP+R N GFMQ+V HIRLRV+ERG GET ACG+GACAA G+ + LL V
Sbjct 180 ENHERFPERANIGFMQVVSRDHIRLRVYERGAGETQACGSGACAAVAVGVVQDLLNENVH 239
Query 243 VELAGGKLQIAWQ-EGDVVWMTGPTANVYEGRLDL 276
VEL GG L I WQ G ++MTGP +VY+G + L
Sbjct 240 VELPGGSLHIRWQGPGHPLYMTGPATHVYDGFIHL 274
>Q9LFG2 Diaminopimelate epimerase, chloroplastic [Arabidopsis
thaliana]
Length=362
Score = 199 bits (505), Expect = 4e-65
Identities = 112/283 (40%), Positives = 164/283 (58%), Gaps = 13/283 (5%)
Query 2 LLEFTKMHGLGNDFVVLD-LISQRAYLDTTTIQRMADRHFGIGFDQLLIVEPPDYPNVDF 60
+L F K HGLGNDF+++D S + ++ DR+FG+G D ++ P D+
Sbjct 77 VLHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGVIFAMP-GVNGTDY 135
Query 61 KYRIFNADGSEVEQCGNGVRCFARFVHERQ-LTKKTKIKVQTKAGIVEPELGPNGWVRVN 119
RIFN+DGSE E CGNGVRCFARF+ E + L K + T AG++ PE+ +G V+V+
Sbjct 136 AMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGKHSFTIHTGAGLIVPEIQDDGQVKVD 195
Query 120 MGYPKFMPHEIP--FVTEEFEALYTLELANEQ-SLKIDVVNMGNPHAVTIV----PDVLT 172
MG P ++P + EA+ EL + S + V+MGNPH +T P++
Sbjct 196 MGTPILKAQDVPTKLSGNKGEAVVEAELVVDGVSWNVTCVSMGNPHCITFGKKGGPNLKV 255
Query 173 ADV--ATMGPQVESHVRFPQRVNAGFMQIVDEKHIRLRVFERGVGETLACGTGACAAAVS 230
D+ +GP+ E H FP R N F++++ H+++RV+ERG G TLACGTGACA V+
Sbjct 256 DDLNLPEIGPKFEHHEMFPARTNTEFVEVLSRSHLKMRVWERGAGATLACGTGACALVVA 315
Query 231 GMRRGLLANEVEVELAGGKLQIAW-QEGDVVWMTGPTANVYEG 272
+ G + V+L GG L+I W QE + ++MTGP V+ G
Sbjct 316 AVLEGRADRKCTVDLPGGPLEIEWKQEDNHIYMTGPAEAVFYG 358
>D2Z026 O-ureido-serine racemase [Streptomyces lavendulae]
Length=287
Score = 189 bits (481), Expect = 2e-62
Identities = 115/274 (42%), Positives = 151/274 (55%), Gaps = 7/274 (3%)
Query 3 LEFTKMHGLGNDFVVLDLISQRAYLDTTT--IQRMADRHFGIGFDQLLIVEPPDYPNVDF 60
L FTKMHG GNDFVVLDL R D + + +ADRH G+G D +L + P
Sbjct 10 LPFTKMHGAGNDFVVLDL---RDGPDPSPELCRALADRHKGVGCDLVLGIREPRSARAVA 66
Query 61 KYRIFNADGSEVEQCGNGVRCFARFVHERQLTKKTKIKVQTKAGIVEPELGPNGWVRVNM 120
+ I+ ADGS QCGNG RC A + L + + + + +G E ++ RV +
Sbjct 67 AFDIWTADGSRSAQCGNGARCVAAWAVRAGLARGPRFALDSPSGTHEVDVLDADTFRVAL 126
Query 121 GYPKFMPHEIPFVTEEFEA-LYTLELANEQSLKIDVVNMGNPHAVTIVPDVLTADVATMG 179
P+F P IP + E LY +L + ++ V+MGNPHAV V D TA VA +G
Sbjct 127 AVPRFAPESIPLFGHDGEQDLYEADLGDGTRVRFAAVSMGNPHAVIEVDDTATAPVARVG 186
Query 180 PQVESHVRFPQRVNAGFMQIVDEKHIRLRVFERGVGETLACGTGACAAAVSGMRRGLLAN 239
V++ F VN GF ++ + LRV E G GETLACG+GACAAA MRRG +
Sbjct 187 RAVQASGLFLPTVNVGFARVESRDRVHLRVHEYGAGETLACGSGACAAAAVLMRRGRVDR 246
Query 240 EVEVELAGGKLQIAWQEGDV-VWMTGPTANVYEG 272
V V L GG+L+I+W + V MTGP A VYEG
Sbjct 247 NVSVVLPGGELRISWPDDAADVLMTGPAAFVYEG 280
>Q46185 Diaminopimelate epimerase [Clostridium perfringens (strain
13 / Type A)]
Length=272
Score = 164 bits (414), Expect = 1e-52
Identities = 98/275 (36%), Positives = 152/275 (55%), Gaps = 12/275 (4%)
Query 3 LEFTKMHGLGNDFVVL-DLISQRAYLDTTTIQRMADRHFGIGFDQLLIVEPPDYPNVDFK 61
++F+KMHG GNDF+V+ DL ++ + Q+M R FGIG D +LIV + N D +
Sbjct 1 MKFSKMHGNGNDFIVIEDLNNEYLGKEGEIAQKMCHRRFGIGADGILIVRKNE--NCDIE 58
Query 62 YRIFNADGSEVEQCGNGVRCFARFVHERQLTKKTKIKVQTKAGI----VEPELGPNGWVR 117
I N+DGS CGNG+RCFA++V+E+ + KK + V T G+ +E E +
Sbjct 59 MVIINSDGSYAAMCGNGIRCFAKYVYEKGIVKKDVLDVLTGDGVKRIFLEIENDKVKTIN 118
Query 118 VNMGYPKFMPHEIPFVTEEFEALYTLELANEQSLKIDVVNMGNPHAVTIVPDVLTADVAT 177
VNMG+ F P IP + +E E + + +I + MG PH + + +
Sbjct 119 VNMGFGDFKPKNIPALCDE-EIIEKKVSVGNGNFEITSLLMGVPHTIIFEEEKYPIEC-- 175
Query 178 MGPQVESHVRFPQRVNAGFMQIVDEKHIRLRVFERGVGETLACGTGACAAAVSGMRRGLL 237
G +E + FPQ N F +++D + +R +ERG G TLACGTG CA+ ++ + GL+
Sbjct 176 -GRDIEKYELFPQGTNVNFCKVIDRNTMEVRTWERGAGPTLACGTGNCASVIAANKLGLV 234
Query 238 ANEVEVELAGGKLQIAWQEGDVVWMTGPTANVYEG 272
EV+V + GG+L++ E D V M G + + +G
Sbjct 235 DKEVKVIVPGGELKVN-IEDDGVKMIGNASFICDG 268
>P54897 Diaminopimelate epimerase 2 [Nostoc sp. (strain PCC 7120
/ SAG 25.82 / UTEX 2576)]
Length=285
Score = 156 bits (395), Expect = 1e-49
Identities = 89/278 (32%), Positives = 146/278 (53%), Gaps = 2/278 (1%)
Query 3 LEFTKMHGLGNDFVVLDLISQRAYLDTTTIQRMADRHFGIGFDQLLIVEPPDYPNVDFKY 62
++F K H LGND++V++ + L I+ + R+FGIG D +L+ P F
Sbjct 1 MKFYKYHALGNDYLVINPQDLKFPLTPEKIKIICHRNFGIGSDGILL-GPLASTKAQFAL 59
Query 63 RIFNADGSEVEQCGNGVRCFARFVHERQLTKKTKIKVQTKAGIVEPELGPNG-WVRVNMG 121
RIFN DGSE E+ GNG+R F+R++ + L + ++T GIVE + G V+V MG
Sbjct 60 RIFNPDGSEAEKSGNGLRIFSRYLWDMGLVDEKPFSIETAGGIVESAIKDAGKTVQVEMG 119
Query 122 YPKFMPHEIPFVTEEFEALYTLELANEQSLKIDVVNMGNPHAVTIVPDVLTADVATMGPQ 181
F +IP + ++ E + +E +GNPH V ++ D+ + GP
Sbjct 120 KVSFWSRDIPVIGDDREVIQEKIFLDEGIFTFCAATIGNPHCVILLDDINSEVARNFGPI 179
Query 182 VESHVRFPQRVNAGFMQIVDEKHIRLRVFERGVGETLACGTGACAAAVSGMRRGLLANEV 241
E + FP R N FM+++D I++ ++ERG G TLA G+ + AAA + + GL +++
Sbjct 180 FEGYPLFPNRTNVQFMKVLDRSTIQIEIWERGAGYTLASGSSSSAAAATAHKLGLCDSKI 239
Query 242 EVELAGGKLQIAWQEGDVVWMTGPTANVYEGRLDLRYF 279
V++ GG + I ++ + MT + +G L F
Sbjct 240 IVKMPGGDILIQIKDDFHISMTDSVTKLAQGELSTEIF 277
>Q8NP73 Diaminopimelate epimerase [Corynebacterium glutamicum
(strain ATCC 13032 / DSM 20300 / BCRC 11384 / JCM 1318 / LMG
3730 / NCIMB 10025)]
Length=277
Score = 120 bits (302), Expect = 6e-36
Identities = 94/293 (32%), Positives = 147/293 (50%), Gaps = 35/293 (12%)
Query 1 MLLEFTKMHGLGNDFVVLDLISQRAYLDTTTIQRMADRHFGIGFDQLL-IVEPPDY---- 55
+ + F K H NDF+++ R L + + DR GIG D +L +V+ D
Sbjct 3 LTIPFAKGHATENDFIIIPDEDARLDLTPEMVVTLCDRRAGIGADGILRVVKAADVEGST 62
Query 56 --PNVDFK-YRIFNADGSEVEQCGNGVRCFARFVHERQLTKKTKIKVQTKAGIVEPEL-- 110
P++ F YR NADGS E CGNGVR FA +++ R L T + T+AG+ ++
Sbjct 63 VDPSLWFMDYR--NADGSLAEMCGNGVRLFAHWLYSRGLVDNTSFDIGTRAGVRHVDILQ 120
Query 111 --GPNGWVRVNMGYPKFMPHEIPFVTEEFEALYTLELANEQSLKIDVVNMGNPHAVTIVP 168
+ VRV+MG P + L T ++ N Q V+MGNPH +VP
Sbjct 121 ADQHSAQVRVDMGIP------------DVTGLSTCDI-NGQVFAGLGVDMGNPHLACVVP 167
Query 169 DV---LTADVATMGPQVESHVRFPQRVNAGFMQIVDEKHIRLRVFERGVGETLACGTGAC 225
+ AD+ P + FP VN + +++ + +RV+ERGVGET +CGTG
Sbjct 168 GLSASALADMELRAPTFDQEF-FPHGVNVEIVTELEDDAVSMRVWERGVGETRSCGTGTV 226
Query 226 AAAVSGMR-RGLLANEVEVELAGGKLQI-AWQEGDVVWMTGPTANVYEGRLDL 276
AAA + + GL V+V + GG++++ + +G +TGP+A + G + +
Sbjct 227 AAACAALADAGLGEGTVKVCVPGGEVEVQIFDDGST--LTGPSAIIALGEVQI 277
Lambda K H a alpha
0.324 0.140 0.427 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 1225784
Database: 9e56a25b951d0e239f5668aa5957363c.SwissProt.fasta
Posted date: May 18, 2024 9:38 PM
Number of letters in database: 6,206
Number of sequences in database: 22
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
