BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 7ce6fbbece93b17563bdf821cf054f22.SwissProt.fasta
18 sequences; 7,710 total letters
Query= ACIAD2660
Length=417
Score E
Sequences producing significant alignments: (Bits) Value
P19572 Diaminopimelate decarboxylase [Pseudomonas aeruginosa (str... 503 0.0
Q9KVL7 Diaminopimelate decarboxylase [Vibrio cholerae serotype O1... 501 0.0
O05321 Diaminopimelate decarboxylase [Pseudomonas fluorescens] 486 1e-174
P44316 Diaminopimelate decarboxylase [Haemophilus influenzae (str... 471 4e-169
Q9JXM2 Diaminopimelate decarboxylase [Neisseria meningitidis sero... 437 9e-156
Q9JWA6 Diaminopimelate decarboxylase [Neisseria meningitidis sero... 433 5e-154
O67262 Diaminopimelate decarboxylase [Aquifex aeolicus (strain VF5)] 358 2e-124
Q9Z661 Diaminopimelate decarboxylase [Zymomonas mobilis subsp. mo... 333 1e-114
Q9PII5 Diaminopimelate decarboxylase [Campylobacter jejuni subsp.... 332 2e-114
Q9ZME5 Diaminopimelate decarboxylase [Helicobacter pylori (strain... 319 3e-109
B4XMC6 Diaminopimelate decarboxylase [Helicobacter pylori] 317 1e-108
Q58497 Diaminopimelate decarboxylase [Methanocaldococcus jannasch... 281 4e-94
Q949X7 Diaminopimelate decarboxylase 1, chloroplastic [Arabidopsi... 231 4e-74
Q94A94 Diaminopimelate decarboxylase 2, chloroplastic [Arabidopsi... 228 5e-73
P41023 Diaminopimelate decarboxylase [Bacillus methanolicus] 221 4e-71
P23630 Diaminopimelate decarboxylase [Bacillus subtilis (strain 1... 220 2e-70
P09890 Diaminopimelate decarboxylase [Corynebacterium glutamicum ... 186 1e-57
P9WIU7 Diaminopimelate decarboxylase [Mycobacterium tuberculosis ... 184 6e-57
>P19572 Diaminopimelate decarboxylase [Pseudomonas aeruginosa
(strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG
12228 / 1C / PRS 101 / PAO1)]
Length=415
Score = 503 bits (1296), Expect = 0.0
Identities = 249/414 (60%), Positives = 320/414 (77%), Gaps = 1/414 (0%)
Query 2 SFSRINGVLHAEQCSLDQLAQQFGTPLYVYSKAAFEKHYKDMDRAFDFIDHQICFAVKSN 61
+FS + L AE +L ++A++FGTP YVYS+A E Y+ A + H +CFAVK+N
Sbjct 3 TFSYRDAELFAEGVALSRIAERFGTPTYVYSRAHIEAQYRAYADALAGMPHLVCFAVKAN 62
Query 62 SNLAVLNVLAKLGSGFDIVTGGELARVLAAGGDPSKIVFSGLGKSEADIQKALEVGIACF 121
SNL VLNVLA+LG+GFDIV+ GEL RVLAAGGDP+K+VFSG+GK+ D+++ALEVG+ CF
Sbjct 63 SNLGVLNVLARLGAGFDIVSRGELERVLAAGGDPAKVVFSGVGKTRDDMRRALEVGVHCF 122
Query 122 NVESYAELDRIQKVAVRLDQKAPVSLRVNPDVDAKTHPYISTGLKENKFGIPSDTVFETY 181
NVES EL+R+Q+VA L KAPVSLRVNPDVDA+THPYISTGLKENKFGI D Y
Sbjct 123 NVESGEELERLQRVAAELGVKAPVSLRVNPDVDAQTHPYISTGLKENKFGIAIDEAEAVY 182
Query 182 QYAASLSHLDVVGIDCHIGSQLTETKPFVDALDRVMVMIEQLNKLGINLKHIDIGGGLGV 241
AA L HL+V+G+DCHIGSQLT+ +PF+DAL+R++ ++++L GI ++H+D+GGGLGV
Sbjct 183 ARAAELDHLEVIGVDCHIGSQLTQLEPFLDALERLLGLVDRLAGKGIGIRHLDLGGGLGV 242
Query 242 CYKDETPPSVAEYANALKPALEKLGLKVYMEPGRSISANAGVLLTRVDLLKPTNHRNFAI 301
Y+DE PP +Y A++ L L + EPGRSI ANAGVLLTRV+ LK T H++FAI
Sbjct 243 RYRDEQPPLAGDYIRAIRERLHGRDLTLVFEPGRSIVANAGVLLTRVEYLKHTEHKDFAI 302
Query 302 IDAAMNDLIRPSLYEAWMDIQSVNESTSAEAKEWDVVGAICETGDFLGKARTLAIQENDI 361
+DAAMNDLIRP+LY+AWMD+Q+V +A + +D+VG ICETGDFL K R LA+ E D+
Sbjct 303 VDAAMNDLIRPALYQAWMDVQAVRPRDAA-PRRYDLVGPICETGDFLAKDRDLALAEGDL 361
Query 362 LAVLGAGAYGFVMSSNYNTRGRAAEVMVDDEKPHLIRERESIESLWERERLLPE 415
LAV AGAYGFVMSSNYNTRGRAAEV+VD E+ H +R RE+++ L+ E LLP+
Sbjct 362 LAVRSAGAYGFVMSSNYNTRGRAAEVLVDGEQTHEVRRRETVQELYAGESLLPQ 415
>Q9KVL7 Diaminopimelate decarboxylase [Vibrio cholerae serotype
O1 (strain ATCC 39315 / El Tor Inaba N16961)]
Length=417
Score = 501 bits (1291), Expect = 0.0
Identities = 250/410 (61%), Positives = 314/410 (77%), Gaps = 2/410 (0%)
Query 7 NGVLHAEQCSLDQLAQQFGTPLYVYSKAAFEKHYKDMDRAFDFIDHQICFAVKSNSNLAV 66
+G L AEQ L LA Q+GTPLYVYS+A E+H+ D++ H IC+AVK+NSNL V
Sbjct 9 DGQLWAEQVPLADLANQYGTPLYVYSRATLERHWHAFDKSVGDYPHLICYAVKANSNLGV 68
Query 67 LNVLAKLGSGFDIVTGGELARVLAAGGDPSKIVFSGLGKSEADIQKALEVGIACFNVESY 126
LN LA+LGSGFDIV+ GEL RVLAAGGDPSK+VFSG+GK+EA++++AL++ I CFNVES
Sbjct 69 LNTLARLGSGFDIVSVGELERVLAAGGDPSKVVFSGVGKTEAEMKRALQLKIKCFNVESE 128
Query 127 AELDRIQKVAVRLDQKAPVSLRVNPDVDAKTHPYISTGLKENKFGIPSDTVFETYQYAAS 186
EL R+ KVA L KAP+SLR+NPDVDAKTHPYISTGL++NKFGI D + Y+ A S
Sbjct 129 PELQRLNKVAGELGVKAPISLRINPDVDAKTHPYISTGLRDNKFGITFDRAAQVYRLAHS 188
Query 187 LSHLDVVGIDCHIGSQLTETKPFVDALDRVMVMIEQLNKLGINLKHIDIGGGLGVCYKDE 246
L +LDV GIDCHIGSQLT PF+DA DR++ +I+ L GI+++H+D+GGGLGV Y+DE
Sbjct 189 LPNLDVHGIDCHIGSQLTALAPFIDATDRLLALIDSLKAEGIHIRHLDVGGGLGVVYRDE 248
Query 247 TPPSVAEYANALKPALEK-LGLKVYMEPGRSISANAGVLLTRVDLLKPTNHRNFAIIDAA 305
PP +EYA AL LE+ L++ EPGR+I+ANAGVL+T+V+ LK T H+NFAIIDAA
Sbjct 249 LPPQPSEYAKALLDRLERHRDLELIFEPGRAIAANAGVLVTKVEFLKHTEHKNFAIIDAA 308
Query 306 MNDLIRPSLYEAWMDIQSVNESTSAEAKEWDVVGAICETGDFLGKARTLAIQENDILAVL 365
MNDLIRP+LY+AW DI + EA+ +D+VG +CET DFLGK R L +QE D+LAV
Sbjct 309 MNDLIRPALYQAWQDIIPL-RPRQGEAQTYDLVGPVCETSDFLGKDRDLVLQEGDLLAVR 367
Query 366 GAGAYGFVMSSNYNTRGRAAEVMVDDEKPHLIRERESIESLWERERLLPE 415
+GAYGF MSSNYNTR R AEVMVD K +L+R+RE + SLW E +LPE
Sbjct 368 SSGAYGFTMSSNYNTRPRVAEVMVDGNKTYLVRQREELSSLWALESVLPE 417
>O05321 Diaminopimelate decarboxylase [Pseudomonas fluorescens]
Length=416
Score = 486 bits (1250), Expect = 1e-174
Identities = 244/415 (59%), Positives = 314/415 (76%), Gaps = 2/415 (0%)
Query 2 SFSRINGVLHAEQCSLDQLAQQFGTPLYVYSKAAFEKHYKDMDRAFDFIDHQICFAVKSN 61
+F+ G L AE +L +A++FGTP YVYS+A E Y+ A + + H +CFAVK+N
Sbjct 3 AFNYRGGELFAEGVALSAIAERFGTPTYVYSRAHIEAQYRTFADALEGMPHLVCFAVKAN 62
Query 62 SNLAVLNVLAKLGSGFDIVTGGELARVLAAGGDPSKIVFSGLGKSEADIQKALEVGIACF 121
SNL VLNVLA+LG+GFDIV+GGEL RVLAAGG KIVFSG+GK+ D+++ALEVG+ CF
Sbjct 63 SNLGVLNVLARLGAGFDIVSGGELERVLAAGGSADKIVFSGVGKTREDMRRALEVGVHCF 122
Query 122 NVESYAEL-DRIQKVAVRLDQKAPVSLRVNPDVDAKTHPYISTGLKENKFGIPSDTVFET 180
N+ES EL R+Q VA L +AP+SLRVNPDVDA THPYISTGLKENKFGI +
Sbjct 123 NIESTDELGSRLQIVAAELGVRAPISLRVNPDVDAGTHPYISTGLKENKFGIAIADAEDV 182
Query 181 YQYAASLSHLDVVGIDCHIGSQLTETKPFVDALDRVMVMIEQLNKLGINLKHIDIGGGLG 240
Y AA L +L+V+G+DCHIGSQLT +PF+DALDR++ ++++L GI L+HID+GGG+G
Sbjct 183 YVRAAQLPNLEVLGVDCHIGSQLTTLEPFIDALDRLLALVDRLGDCGIYLRHIDLGGGVG 242
Query 241 VCYKDETPPSVAEYANALKPALEKLGLKVYMEPGRSISANAGVLLTRVDLLKPTNHRNFA 300
V Y+DE PP VA+Y A++ L+ L + EPGR I ANAGVLLT+V+ LK T H++FA
Sbjct 243 VRYRDEEPPLVADYIKAVRERLDGRDLALMFEPGRYIVANAGVLLTQVEYLKHTEHKDFA 302
Query 301 IIDAAMNDLIRPSLYEAWMDIQSVNESTSAEAKEWDVVGAICETGDFLGKARTLAIQEND 360
I+DAAMNDLIRP+LY+AWMD+ +V +A A+ +D+VG ICETGDFL K R LA++E D
Sbjct 303 IVDAAMNDLIRPALYQAWMDVTAVRPRDTA-ARSYDIVGPICETGDFLAKGRELALEEGD 361
Query 361 ILAVLGAGAYGFVMSSNYNTRGRAAEVMVDDEKPHLIRERESIESLWERERLLPE 415
+LAV AGAYGFVMSSNYNTRGR AEV+VD ++ +R RE++ L+ E LLPE
Sbjct 362 LLAVHSAGAYGFVMSSNYNTRGRCAEVLVDGDQAFEVRRRETVAELFAGESLLPE 416
>P44316 Diaminopimelate decarboxylase [Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd)]
Length=415
Score = 471 bits (1213), Expect = 4e-169
Identities = 237/405 (59%), Positives = 303/405 (75%), Gaps = 7/405 (2%)
Query 10 LHAEQCSLDQLAQQFGTPLYVYSKAAFEKHYKDMDRAFDFIDHQICFAVKSNSNLAVLNV 69
L+AE + QLA+QFGTPLYVYS+A E+H+ D AF H ICFAVKS SN+ VLN+
Sbjct 11 LYAEDMPVQQLAEQFGTPLYVYSRATLERHWHAFDSAFGNRPHLICFAVKSCSNIGVLNI 70
Query 70 LAKLGSGFDIVTGGELARVLAAGGDPSKIVFSGLGKSEADIQKALEVGIACFNVESYAEL 129
+AKLGSGFDIV+ GEL RVLAAGGD SK+VFSG+ KS +I +ALEV I CFNVES +EL
Sbjct 71 MAKLGSGFDIVSQGELERVLAAGGDASKVVFSGVAKSREEIMRALEVRIRCFNVESVSEL 130
Query 130 DRIQKVAVRLDQKAPVSLRVNPDVDAKTHPYISTGLKENKFGIPSDTVFETYQYAASLSH 189
I ++A + + AP+SLRVNPDVDA THPYISTGLKENKFG+ + E Y+ A++L +
Sbjct 131 KHINQIAGEMGKIAPISLRVNPDVDAHTHPYISTGLKENKFGVSVNEAREVYKLASTLPN 190
Query 190 LDVVGIDCHIGSQLTETKPFVDALDRVMVMIEQLNKLGINLKHIDIGGGLGVCYKDETPP 249
+ + G+DCHIGSQLTE +PF+DA DR++V++EQL + GI LKH+D+GGGLGV Y DETPP
Sbjct 191 IKITGMDCHIGSQLTELQPFLDATDRLIVLMEQLKEDGITLKHLDLGGGLGVTYTDETPP 250
Query 250 SVAEYANALKPALEKL----GLKVYMEPGRSISANAGVLLTRVDLLKPTNHRNFAIIDAA 305
++YANAL LEKL L++ +EPGR+ISANAG+L+ +V LK RNFAI D
Sbjct 251 HPSDYANAL---LEKLKNYPELEIILEPGRAISANAGILVAKVQYLKSNESRNFAITDTG 307
Query 306 MNDLIRPSLYEAWMDIQSVNESTSAEAKEWDVVGAICETGDFLGKARTLAIQENDILAVL 365
MND+IRP+LYEA+M+I ++ + E +DVVG +CET DFLGK R L+I E D +A
Sbjct 308 MNDMIRPALYEAYMNIVEIDRTLEREKAIYDVVGPVCETSDFLGKQRELSIAEGDYIAQC 367
Query 366 GAGAYGFVMSSNYNTRGRAAEVMVDDEKPHLIRERESIESLWERE 410
AGAYG MSSNYN+R R AEV+VD ++ +LIR RE+++ LW E
Sbjct 368 SAGAYGASMSSNYNSRARTAEVLVDGDQSYLIRRRETLQELWALE 412
>Q9JXM2 Diaminopimelate decarboxylase [Neisseria meningitidis
serogroup B (strain MC58)]
Length=414
Score = 437 bits (1125), Expect = 9e-156
Identities = 216/401 (54%), Positives = 290/401 (72%), Gaps = 1/401 (0%)
Query 10 LHAEQCSLDQLAQQFGTPLYVYSKAAFEKHYKDMDRAFDFIDHQICFAVKSNSNLAVLNV 69
L EQ +LA+ FGTPLYVYS++A + ++ AF ++ +C+AVK+N NL+++
Sbjct 3 LFCEQVPYPRLAEAFGTPLYVYSQSALTEAFEHYQTAFAALNPLVCYAVKANGNLSIIKH 62
Query 70 LAKLGSGFDIVTGGELARVLAAGGDPSKIVFSGLGKSEADIQKALEVGIACFNVESYAEL 129
A LGSGFDIV+GGELARVLAAGGD +K +FSG+GKSEA+I+ AL G+ CFN+ES E+
Sbjct 63 FASLGSGFDIVSGGELARVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFNMESIPEI 122
Query 130 DRIQKVAVRLDQKAPVSLRVNPDVDAKTHPYISTGLKENKFGIPSDTVFETYQYAASLSH 189
DRIQKVA RL + APVSLR+NPDVDAKTHPYISTGLK NKFGI E Y YAA +
Sbjct 123 DRIQKVAARLGKTAPVSLRINPDVDAKTHPYISTGLKANKFGIAYADALEAYHYAAQQPN 182
Query 190 LDVVGIDCHIGSQLTETKPFVDALDRVMVMIEQLNKLGINLKHIDIGGGLGVCYKDETPP 249
L ++GIDCHIGSQLT+ P V+A +R++++++ L GI L+H+D+GGG+G+ Y+DE P
Sbjct 183 LKIIGIDCHIGSQLTDLSPLVEACERILILVDALAAEGIVLEHLDLGGGVGIVYQDENVP 242
Query 250 SVAEYANALKPALEKLGLKVYMEPGRSISANAGVLLTRVDLLKPTNHRNFAIIDAAMNDL 309
+ YA A++ + LK+ +EPGRS+ NAG LLTRV+ +K +NF ++DAAMNDL
Sbjct 243 DLGAYAQAVQKLIGTRRLKLILEPGRSLVGNAGSLLTRVEFVKYGEEKNFVMVDAAMNDL 302
Query 310 IRPSLYEAWMDIQSVNESTSAEAKEWDVVGAICETGDFLGKARTLAIQENDILAVLGAGA 369
+RP+LY+A+ I++V E+ ++VG ICETGDFLGK RT+A +E D+L + AGA
Sbjct 303 MRPALYDAYHHIEAV-ETKDIATLTANIVGPICETGDFLGKDRTIACEEGDLLLIRSAGA 361
Query 370 YGFVMSSNYNTRGRAAEVMVDDEKPHLIRERESIESLWERE 410
YG M+SNYN R RAAEV+VD + LIR RE++E E
Sbjct 362 YGASMASNYNARNRAAEVLVDGNEYRLIRRRETLEQQMANE 402
>Q9JWA6 Diaminopimelate decarboxylase [Neisseria meningitidis
serogroup A / serotype 4A (strain DSM 15465 / Z2491)]
Length=406
Score = 433 bits (1113), Expect = 5e-154
Identities = 215/401 (54%), Positives = 288/401 (72%), Gaps = 1/401 (0%)
Query 10 LHAEQCSLDQLAQQFGTPLYVYSKAAFEKHYKDMDRAFDFIDHQICFAVKSNSNLAVLNV 69
L EQ +LA+ FGTPLYVYS++A + ++ AF + +C+AVK+N NL+++
Sbjct 3 LFCEQVPYPRLAEAFGTPLYVYSQSALTEAFEHYQTAFAELSPLVCYAVKANGNLSIIKH 62
Query 70 LAKLGSGFDIVTGGELARVLAAGGDPSKIVFSGLGKSEADIQKALEVGIACFNVESYAEL 129
A LGSGFDIV+GGELARVLAAGGD +K +FSG+GKSEA+I+ AL G+ CFN+ES E+
Sbjct 63 FASLGSGFDIVSGGELARVLAAGGDAAKTIFSGVGKSEAEIEFALNAGVKCFNMESIPEI 122
Query 130 DRIQKVAVRLDQKAPVSLRVNPDVDAKTHPYISTGLKENKFGIPSDTVFETYQYAASLSH 189
DRIQKVA RL + A VSLRVNPDVDAKTHPYISTGLK NKFGI E Y++AA +
Sbjct 123 DRIQKVAARLGKTASVSLRVNPDVDAKTHPYISTGLKANKFGIAYADALEAYRHAAQQPN 182
Query 190 LDVVGIDCHIGSQLTETKPFVDALDRVMVMIEQLNKLGINLKHIDIGGGLGVCYKDETPP 249
L ++GIDCHIGSQLT+ P V+A +R++++++ L GI L+H+D+GGG+G+ Y+DE P
Sbjct 183 LKIIGIDCHIGSQLTDLSPLVEACERILILVDALAAEGIVLEHLDLGGGVGIVYQDEDVP 242
Query 250 SVAEYANALKPALEKLGLKVYMEPGRSISANAGVLLTRVDLLKPTNHRNFAIIDAAMNDL 309
+ YA A++ + LK+ +EPGRS+ NAG LLTRV+ +K +NF ++DAAMNDL
Sbjct 243 DLGAYAQAVQKLIGTRRLKLILEPGRSLVGNAGALLTRVEFVKYGEEKNFVMVDAAMNDL 302
Query 310 IRPSLYEAWMDIQSVNESTSAEAKEWDVVGAICETGDFLGKARTLAIQENDILAVLGAGA 369
+RP+LY+A+ I++V A ++VG ICETGDFLGK RT+A +E D+L + AGA
Sbjct 303 MRPALYDAYHHIEAVEPKNIAPLTA-NIVGPICETGDFLGKDRTIACEEGDLLLIRSAGA 361
Query 370 YGFVMSSNYNTRGRAAEVMVDDEKPHLIRERESIESLWERE 410
YG M+SNYN R RAAEV+VD + LIR RE++E E
Sbjct 362 YGASMASNYNARNRAAEVLVDGNEYRLIRRRETLEQQMANE 402
>O67262 Diaminopimelate decarboxylase [Aquifex aeolicus (strain
VF5)]
Length=420
Score = 358 bits (919), Expect = 2e-124
Identities = 188/404 (47%), Positives = 277/404 (69%), Gaps = 5/404 (1%)
Query 7 NGVLHAEQCSLDQLAQQFGTPLYVYSKAAFEKHYKDMDRAFDFIDHQICFAVKSNSNLAV 66
+G L E SL +LAQ FGTPLYVYS ++ ++ +AF D IC+AVK+N N +
Sbjct 15 DGELFIEGVSLKELAQTFGTPLYVYSSNFIKERFEAYRKAFP--DALICYAVKANFNPHL 72
Query 67 LNVLAKLGSGFDIVTGGELARVLAAGGDPSKIVFSGLGKSEADIQKALEVGIACFNVESY 126
+ +L +LG+G DIV+GGEL AG P +IV++G+GK+E ++ A++ I FNVES
Sbjct 73 VKLLGELGAGADIVSGGELYLAKKAGIPPERIVYAGVGKTEKELTDAVDSEILMFNVESR 132
Query 127 AELDRIQKVAVRLDQKAPVSLRVNPDVDAKTHPYISTGLKENKFGIPSDTVFETYQYAAS 186
ELD + ++A +L +KA +++RVNPDVD KTHPYI+TG++++KFG+ + Y+YA+
Sbjct 133 QELDVLNEIAGKLGKKARIAIRVNPDVDPKTHPYIATGMQKSKFGVDIREAQKEYEYASK 192
Query 187 LSHLDVVGIDCHIGSQLTETKPFVDALDRVMVMIEQLNKLGINLKHIDIGGGLGVCYK-D 245
L +L++VGI CHIGSQ+ + P+ +A+++V+ + E L + G ++K++DIGGGLG+ YK +
Sbjct 193 LENLEIVGIHCHIGSQILDISPYREAVEKVVSLYESLTQKGFDIKYLDIGGGLGIKYKPE 252
Query 246 ETPPSVAEYANALKPALEKLGLKVYMEPGRSISANAGVLLTRVDLLKPTNHRNFAIIDAA 305
+ P+ + A+ LK LE + K+ +EPGRSI NAG+L+T+V LK ++F I+DA
Sbjct 253 DKEPAPQDLADLLKDLLENVKAKIILEPGRSIMGNAGILITQVQFLKDKGSKHFIIVDAG 312
Query 306 MNDLIRPSLYEAWMDIQSVNESTSAEAKEWDVVGAICETGDFLGKARTL-AIQENDILAV 364
MNDLIRPS+Y A+ I V E+ + D+VG ICETGDFL R + +Q + LAV
Sbjct 313 MNDLIRPSIYNAYHHIIPV-ETKERKKVVADIVGPICETGDFLALDREIEEVQRGEYLAV 371
Query 365 LGAGAYGFVMSSNYNTRGRAAEVMVDDEKPHLIRERESIESLWE 408
L AGAYGF MSS+YN R RAAEV+V++ LIR+RE+ + + E
Sbjct 372 LSAGAYGFAMSSHYNMRPRAAEVLVENGSVKLIRKRENYDYIVE 415
>Q9Z661 Diaminopimelate decarboxylase [Zymomonas mobilis subsp.
mobilis (strain ATCC 31821 / ZM4 / CP4)]
Length=421
Score = 333 bits (854), Expect = 1e-114
Identities = 180/415 (43%), Positives = 264/415 (64%), Gaps = 8/415 (2%)
Query 3 FSRINGVLHAEQCSLDQLAQQFGTPLYVYSKAAFEKHYKDMDRAFDFIDHQ---ICFAVK 59
FS NG L E L ++A Q+GTP YVYS + + + +A D + FAVK
Sbjct 4 FSLKNGTLCVEDIPLPEIAAQYGTPCYVYSHSYLTERARRFTKALDGAGKGKSLVAFAVK 63
Query 60 SNSNLAVLNVLAKLGSGFDIVTGGELARVLAAGGDPSKIVFSGLGKSEADIQKALEVGIA 119
+N + A+L AK G G D+V+ GE+ R + AG P +IVFSG+GK+ +++ ALE+GI
Sbjct 64 ANPSQAILASFAKEGLGADVVSAGEIRRAVHAGIPPERIVFSGVGKTAEEMRYALEIGIG 123
Query 120 CFNVESYAELDRIQKVAVRLDQKAPVSLRVNPDVDAKTHPYISTGLKENKFGIPSDTVFE 179
FN+ES +E++ + +VA L +KA V+LR+NPDVD TH I+TG + KFGI ++
Sbjct 124 QFNIESVSEIEMLAEVATSLGKKAAVALRINPDVDPHTHAKIATGKADTKFGIAAEDALS 183
Query 180 TYQYAASLSHLDVVGIDCHIGSQLTETKPFVDALDRVMVMIEQLNKLGINLKHIDIGGGL 239
Y+ AS L + GI HIGSQ+T+ PF A +R+ +I L K G ++ D+GGGL
Sbjct 184 AYEKLASYPSLKIQGIASHIGSQITDLAPFEAAAERIYEIITALEKAGHAIETADLGGGL 243
Query 240 GVCYKDE--TPPSVAEYANALKPALEKLGLKVYMEPGRSISANAGVLLTRVDLLKPTNHR 297
GV YKD+ PPSV Y +K + ++ EPGRS+ ANAGVLL++V +K +
Sbjct 244 GVRYKDDQPEPPSVEAYGEMIKRVTKGWNCRLIFEPGRSLIANAGVLLSKVIRIKESKTA 303
Query 298 NFAIIDAAMNDLIRPSLYEAWMDIQSVNESTSAEAKEWDVVGAICETGDFLGKARTL-AI 356
F I+DAAMNDL+RP+LY+A+ +I++V + SA+ + D+VG +CETGD + R++ A+
Sbjct 304 RFVILDAAMNDLVRPTLYDAYHEIKAV--TPSAQTYQADIVGPVCETGDIFARNRSISAV 361
Query 357 QENDILAVLGAGAYGFVMSSNYNTRGRAAEVMVDDEKPHLIRERESIESLWERER 411
+ +D++A++ AGAYG M+S YN+R AEVMV K LIR+R+S+E L E+
Sbjct 362 KADDLMAIMSAGAYGATMASAYNSRPLVAEVMVSGNKSALIRKRQSVEDLMRDEQ 416
>Q9PII5 Diaminopimelate decarboxylase [Campylobacter jejuni subsp.
jejuni serotype O:2 (strain ATCC 700819 / NCTC 11168)]
Length=402
Score = 332 bits (851), Expect = 2e-114
Identities = 180/388 (46%), Positives = 250/388 (64%), Gaps = 4/388 (1%)
Query 19 QLAQQFGTPLYVYSKAAFEKHYKDMDRAFDFIDHQICFAVKSNSNLAVLNVLAKLGSGFD 78
QL Q+F TP Y+Y+ ++ + ++ AF QI +AVK+NSNL++L +LA L SGFD
Sbjct 5 QLKQEFNTPFYIYNFDFIKERFLNLKEAFKARKSQIFYAVKANSNLSLLQMLANLDSGFD 64
Query 79 IVTGGELARVLAAGGDPSKIVFSGLGKSEADIQKALEVGIACFNVESYAELDRIQKVAVR 138
V+ GE+ R L AG KI+FSG+GK++ ++++ALE I N+ES AE+ ++ VA
Sbjct 65 CVSIGEVKRALKAGAKAYKIIFSGVGKTKEELRQALEYDILYINLESEAEMMLLESVAKE 124
Query 139 LDQKAPVSLRVNPDVDAKTHPYISTGLKENKFGIPSDTVFETYQYAASLSHLDVVGIDCH 198
L+ KA +S+RVNP+VDAKTHPYISTGL ENKFG+ D + Y YA + S L+ VG+ H
Sbjct 125 LNLKARISIRVNPNVDAKTHPYISTGLNENKFGVEIDIARKMYLYAKNSSFLEPVGVHFH 184
Query 199 IGSQLTETKPFVDALDRVMVMIEQLNKLGINLKHIDIGGGLGVCY-KDETPPSVAEYANA 257
IGSQL + P +A V ++ +L L I+LK DIGGGLGV Y K+E P + +YA
Sbjct 185 IGSQLLDISPIHEAAAIVAKLVRELKALQIDLKFFDIGGGLGVAYEKNECEPDLYDYAQG 244
Query 258 LKPALEKLGLKVYMEPGRSISANAGVLLTRVDLLKPTNHRNFAIIDAAMNDLIRPSLYEA 317
+ L L L + MEPGR + A +G + V K + F ++D AMNDLIRPSLYEA
Sbjct 245 ILAQLHGLDLTIGMEPGRYLVAKSGEFVCSVLYEKQNKTKRFVVVDGAMNDLIRPSLYEA 304
Query 318 WMDIQSVNESTSAEAKEWDVVGAICETGDFLGKARTL-AIQENDILAVLGAGAYGFVMSS 376
+ +I + E DVVG ICE+GDF KAR+L + Q +DI+ + GAYGF MSS
Sbjct 305 YHEI--ILPYNQGEESLCDVVGGICESGDFFAKARSLPSTQSDDIMVIKNTGAYGFSMSS 362
Query 377 NYNTRGRAAEVMVDDEKPHLIRERESIE 404
NYNTR + E+ +++ + LIR+RE+ E
Sbjct 363 NYNTRNKVCELALEEGQVRLIRQRENFE 390
>Q9ZME5 Diaminopimelate decarboxylase [Helicobacter pylori (strain
J99 / ATCC 700824)]
Length=405
Score = 319 bits (817), Expect = 3e-109
Identities = 169/394 (43%), Positives = 247/394 (63%), Gaps = 1/394 (0%)
Query 18 DQLAQQFGTPLYVYSKAAFEKHYKDMDRAFDFIDHQICFAVKSNSNLAVLNVLAKLGSGF 77
++L Q + TP Y+Y ++ + + AF IC+A+K+NSNL++L++LA LGSG
Sbjct 5 EELFQTYKTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLANLGSGA 64
Query 78 DIVTGGELARVLAAGGDPSKIVFSGLGKSEADIQKALEVGIACFNVESYAELDRIQKVAV 137
D V+ GE+ R L AG P KIVFSG+GKS +I++AL++ I NVES+ EL I+ +A
Sbjct 65 DCVSIGEIQRALKAGIKPYKIVFSGVGKSAFEIEQALKLNILFLNVESFMELKTIETIAQ 124
Query 138 RLDQKAPVSLRVNPDVDAKTHPYISTGLKENKFGIPSDTVFETYQYAASLSHLDVVGIDC 197
L KA +S+R+NP++DAKTHPYISTGLKENKFG+ E + +A + L+ V +
Sbjct 125 SLGIKARISIRINPNIDAKTHPYISTGLKENKFGVEEKEALEMFLWAKKSAFLEPVSVHF 184
Query 198 HIGSQLTETKPFVDALDRVMVMIEQLNKLGINLKHIDIGGGLGVCYKDETPPSVAEYANA 257
HIGSQL + P +A +V + + L LGI+L+ D+GGG+GV Y++E + +YA
Sbjct 185 HIGSQLLDLDPITEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSYENEETIKLYDYAQG 244
Query 258 LKPALEKLGLKVYMEPGRSISANAGVLLTRVDLLKPTNHRNFAIIDAAMNDLIRPSLYEA 317
+ +L+ L L + EPGRSI A +G L+T+V K ++ F I+DA MND +RPSLY A
Sbjct 245 ILNSLQGLDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVIVDAGMNDFLRPSLYHA 304
Query 318 WMDIQSVNESTSAEAKEWDVVGAICETGD-FLGKARTLAIQENDILAVLGAGAYGFVMSS 376
I+ + E DVVG +CE+ D FL A ++ D LA+ GAYG M+S
Sbjct 305 KHAIRVITPCGGREISPCDVVGPVCESSDTFLKDANLPELEPGDKLAIEKVGAYGSSMAS 364
Query 377 NYNTRGRAAEVMVDDEKPHLIRERESIESLWERE 410
YN+R + E+ ++D K +IR+RE++E LW E
Sbjct 365 QYNSRPKLLELALEDHKIRVIRKREALEDLWRLE 398
>B4XMC6 Diaminopimelate decarboxylase [Helicobacter pylori]
Length=405
Score = 317 bits (812), Expect = 1e-108
Identities = 168/394 (43%), Positives = 248/394 (63%), Gaps = 1/394 (0%)
Query 18 DQLAQQFGTPLYVYSKAAFEKHYKDMDRAFDFIDHQICFAVKSNSNLAVLNVLAKLGSGF 77
++L Q TP Y+Y ++ + + AF IC+A+K+NSNL++L++LA L SG
Sbjct 5 EELFQTHKTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLAHLESGA 64
Query 78 DIVTGGELARVLAAGGDPSKIVFSGLGKSEADIQKALEVGIACFNVESYAELDRIQKVAV 137
D V+ GE+ R L AG P +IVFSG+GKS +I++AL++ I NVES+ EL I+ +A
Sbjct 65 DCVSIGEIQRALKAGIKPYRIVFSGVGKSAFEIEQALKLNILFLNVESFMELKTIETIAQ 124
Query 138 RLDQKAPVSLRVNPDVDAKTHPYISTGLKENKFGIPSDTVFETYQYAASLSHLDVVGIDC 197
L KA +S+R+NP++DAKTHPYISTGLKENKFG+ E + +A + L+ V +
Sbjct 125 SLGIKARISIRINPNIDAKTHPYISTGLKENKFGVGEKEALEMFLWAKKSAFLEPVSVHF 184
Query 198 HIGSQLTETKPFVDALDRVMVMIEQLNKLGINLKHIDIGGGLGVCYKDETPPSVAEYANA 257
HIGSQL + +P ++A +V + + L LGI+L+ D+GGG+GV Y++E + +YA
Sbjct 185 HIGSQLLDLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSYENEETIKLYDYAQG 244
Query 258 LKPALEKLGLKVYMEPGRSISANAGVLLTRVDLLKPTNHRNFAIIDAAMNDLIRPSLYEA 317
+ AL+ L L + EPGRSI A +G L+T+V K ++ F I+DA MND +RPSLY A
Sbjct 245 ILNALQGLDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVIVDAGMNDFLRPSLYHA 304
Query 318 WMDIQSVNESTSAEAKEWDVVGAICETGD-FLGKARTLAIQENDILAVLGAGAYGFVMSS 376
I+ + S E DVVG +CE+ D FL A ++ D +A+ GAYG M+S
Sbjct 305 KHAIRVITPSKGREISPCDVVGPVCESSDTFLKDAHLPELEPGDKIAIEKVGAYGSSMAS 364
Query 377 NYNTRGRAAEVMVDDEKPHLIRERESIESLWERE 410
YN+R + E+ ++D K +IR+RE++E LW E
Sbjct 365 QYNSRPKLLELALEDHKIRVIRKREALEDLWRLE 398
>Q58497 Diaminopimelate decarboxylase [Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440)]
Length=438
Score = 281 bits (719), Expect = 4e-94
Identities = 161/411 (39%), Positives = 247/411 (60%), Gaps = 17/411 (4%)
Query 19 QLAQQFGTPLYVYSKAAFEKHYKDMDRAFDFIDHQ------ICFAVKSNSNLAVLNVLAK 72
+LA++FGTPLYV S+ + +Y AF + + + +A K+N+NLA+ +LAK
Sbjct 27 ELAEKFGTPLYVMSEEQIKINYNRYIEAFKRWEEETGKEFIVAYAYKANANLAITRLLAK 86
Query 73 LGSGFDIVTGGELARVLAAGGDPSKIVFSGLGKSEADIQKALEVGIACFNVESYAELDRI 132
LG G D+V+GGEL + KIVF+G K++ +I +E I FNV+S +EL I
Sbjct 87 LGCGADVVSGGELYIAKLSNVPSKKIVFNGNCKTKEEIIMGIEANIRAFNVDSISELILI 146
Query 133 QKVAVRLDQKAPVSLRVNPDVDAKTHPYISTGLKENKFG--IPSDTVFETYQYAASLSHL 190
+ A L + A V+ R+NP+V+ KTHP ISTGLK+NKFG + S + + A + ++
Sbjct 147 NETAKELGETANVAFRINPNVNPKTHPKISTGLKKNKFGLDVESGIAMKAIKMALEMEYV 206
Query 191 DVVGIDCHIGSQLTETKPFVDALDRVMVMIEQLNKLGINLKHIDIGGGLGV-CYKDETPP 249
+VVG+ CHIGSQLT+ PF++ +VM + +L + GI ++ +++GGGLG+ YKD+ P
Sbjct 207 NVVGVHCHIGSQLTDISPFIEETRKVMDFVVELKEEGIEIEDVNLGGGLGIPYYKDKQIP 266
Query 250 SVAEYANALKPALEKLGLKVYM-----EPGRSISANAGVLLTRVDLLKPTNHRNFAIIDA 304
+ + A+A+ + K KV M EPGRS+ A AG LL +V +K T + +IDA
Sbjct 267 TQKDLADAIINTMLKYKDKVEMPNLILEPGRSLVATAGYLLGKVHHIKETPVTKWVMIDA 326
Query 305 AMNDLIRPSLYEAWMDIQSVNESTSAEAKEWDVVGAICETGDFLGKARTL-AIQENDILA 363
MND++RP++YEA+ I +N E + + G +CE+ D G+ R L ++ D+LA
Sbjct 327 GMNDMMRPAMYEAYHHI--INCKVKNEKEVVSIAGGLCESSDVFGRDRELDKVEVGDVLA 384
Query 364 VLGAGAYGFVMSSNYNTRGRAAEVMVDDEKPHLIRERESIESLWERERLLP 414
+ GAYG M++NYN RGR V+ + LIRERE+ L ++ + P
Sbjct 385 IFDVGAYGISMANNYNARGRPRMVLTSKKGVFLIRERETYADLIAKDIVPP 435
>Q949X7 Diaminopimelate decarboxylase 1, chloroplastic [Arabidopsis
thaliana]
Length=484
Score = 231 bits (588), Expect = 4e-74
Identities = 138/392 (35%), Positives = 221/392 (56%), Gaps = 7/392 (2%)
Query 7 NGVLHAEQCSLDQLAQQFGT-PLYVYSKAAFEKHYKDMDRAFDFIDHQICFAVKSNSNLA 65
+G L+ E ++ + + P Y+YSK ++ + A + + I +A+K+N+NL
Sbjct 72 DGFLYCEGTKVEDIMESVERRPFYLYSKPQITRNLEAYKEALEGVSSVIGYAIKANNNLK 131
Query 66 VLNVLAKLGSGFDIVTGGELARVLAAGGDPSKIVFSGLGKSEADIQKALEVGIACFNVES 125
+L L LG G +V+G EL L AG DP+K +F+G GKS D+ A + G+ NV+S
Sbjct 132 ILEHLRSLGCGAVLVSGNELRLALRAGFDPTKCIFNGNGKSLEDLVLAAQEGV-FVNVDS 190
Query 126 YAELDRIQKVAVRLDQKAPVSLRVNPDVDAKTHPYISTGLKENKFGIPSDTV-FETYQYA 184
+L+ I + + ++ V LR+NPDVD + HPY++TG K +KFGI ++ + + Q
Sbjct 191 EFDLNNIVEASRISGKQVNVLLRINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDQVK 250
Query 185 ASLSHLDVVGIDCHIGSQLTETKPFVDALDRVMVMIEQLNKLGINLKHIDIGGGLGVCY- 243
A L +VG CH+GS +T+ F DA ++ I+++ + G + +++IGGGLG+ Y
Sbjct 251 AHPKELKLVGAHCHLGSTITKVDIFRDAAVLMIEYIDEIRRQGFEVSYLNIGGGLGIDYY 310
Query 244 -KDETPPSVAEYANALKPALEKLGLKVYMEPGRSISANAGVLLTRVDLLKPTNHRNFAII 302
P+ + N ++ + L + +EPGRS+ AN + V +K +NF +I
Sbjct 311 HAGAVLPTPMDLINTVRELVLSRDLNLIIEPGRSLIANTCCFVNHVTGVKTNGTKNFIVI 370
Query 303 DAAMNDLIRPSLYEAWMDIQSVN-ESTSAEAKEWDVVGAICETGDFLGKARTLAIQENDI 361
D +M +LIRPSLY+A+ I+ V+ AE ++DVVG +CE+ DFLGK R L
Sbjct 371 DGSMAELIRPSLYDAYQHIELVSPPPAEAEVTKFDVVGPVCESADFLGKDRELPTPPQGA 430
Query 362 -LAVLGAGAYGFVMSSNYNTRGRAAEVMVDDE 392
L V AGAY M+S YN + R E V+++
Sbjct 431 GLVVHDAGAYCMSMASTYNLKMRPPEYWVEED 462
>Q94A94 Diaminopimelate decarboxylase 2, chloroplastic [Arabidopsis
thaliana]
Length=489
Score = 228 bits (581), Expect = 5e-73
Identities = 137/392 (35%), Positives = 221/392 (56%), Gaps = 7/392 (2%)
Query 7 NGVLHAEQCSLDQLAQQFGT-PLYVYSKAAFEKHYKDMDRAFDFIDHQICFAVKSNSNLA 65
+G L+ E + + + P Y+YSK ++ + A + + I +A+K+N+NL
Sbjct 77 DGFLYCEGTKVQDIMETVEKRPFYLYSKPQITRNLEAYKEALEGVRSVIGYAIKANNNLK 136
Query 66 VLNVLAKLGSGFDIVTGGELARVLAAGGDPSKIVFSGLGKSEADIQKALEVGIACFNVES 125
+L L LG G +V+G EL L AG DP+K +F+G GKS D+ A + G+ NV+S
Sbjct 137 ILEHLRSLGCGAVLVSGNELRLALLAGFDPTKCIFNGNGKSLEDLVLAAQEGV-FVNVDS 195
Query 126 YAELDRIQKVAVRLDQKAPVSLRVNPDVDAKTHPYISTGLKENKFGIPSDTV-FETYQYA 184
+L+ I + + ++ V LR+NPDVD + HPY++TG K +KFGI ++ + + +
Sbjct 196 EFDLNNIVEASRISGKQVNVLLRINPDVDPQVHPYVATGNKNSKFGIRNEKLQWFLDEVK 255
Query 185 ASLSHLDVVGIDCHIGSQLTETKPFVDALDRVMVMIEQLNKLGINLKHIDIGGGLGVCY- 243
A L +VG CH+GS +T+ F DA ++ I+++ + G + +++IGGGLG+ Y
Sbjct 256 AHPKELKLVGAHCHLGSTITKVDIFRDAAVLMIEYIDEIRRQGFEVSYLNIGGGLGIDYY 315
Query 244 -KDETPPSVAEYANALKPALEKLGLKVYMEPGRSISANAGVLLTRVDLLKPTNHRNFAII 302
P+ + N ++ + L + +EPGRS+ AN + V +K +NF +I
Sbjct 316 HAGAVLPTPMDLINTVRELVLSRDLNLIIEPGRSLIANTCCFVNHVTGVKTNGTKNFIVI 375
Query 303 DAAMNDLIRPSLYEAWMDIQSVNES-TSAEAKEWDVVGAICETGDFLGKARTLAIQENDI 361
D +M +LIRPSLY+A+ I+ V+ + AE ++DVVG +CE+ DFLGK R L
Sbjct 376 DGSMAELIRPSLYDAYQHIELVSPTPPEAEVTKFDVVGPVCESADFLGKDRELPTPPQGA 435
Query 362 -LAVLGAGAYGFVMSSNYNTRGRAAEVMVDDE 392
L V AGAY M+S YN + R E V+++
Sbjct 436 GLVVHDAGAYCMSMASTYNLKMRPPEYWVEED 467
>P41023 Diaminopimelate decarboxylase [Bacillus methanolicus]
Length=432
Score = 221 bits (564), Expect = 4e-71
Identities = 141/419 (34%), Positives = 228/419 (54%), Gaps = 17/419 (4%)
Query 4 SRINGVLHAEQCSLD--QLAQQFGTPLYVYSKAAFEKHYKDMDRAFDF--IDHQICFAVK 59
+++N H E +D +LAQ++GTPLYVY A + + FD I Q+ +A K
Sbjct 7 TKVNEKGHLEIGGVDTIELAQKYGTPLYVYDVALIRERARGFKNTFDELGIKAQVAYASK 66
Query 60 SNSNLAVLNVLAKLGSGFDIVTGGELARVLAAGGDPSKIVFSGLGKSEADIQKALEVGIA 119
+ S +A++ + + G D+V+GGEL L AG KI F G KS A+++ ALE I
Sbjct 67 AFSTVAMIQLAEEEGLSLDVVSGGELYTALVAGFPVHKIHFHGNNKSRAELEMALEHQIG 126
Query 120 CFNVESYAELDRIQKVAVRLDQKAPVSLRVNPDVDAKTHPYISTGLKENKFG--IPSDTV 177
C V+++ ELD I + + K + LRV P ++A TH YI TG +++KFG + +
Sbjct 127 CIVVDNFHELDLIDSICSEKNVKTNILLRVTPGIEAHTHDYILTGQEDSKFGFDLQNGQA 186
Query 178 FETYQYAASLSHLDVVGIDCHIGSQLTETKPFVDALDRVMVMI-EQLNKLGINLKHIDIG 236
+ Q A + + ++V+G+ CHIGSQ+ +T FV A ++ + E ++L K +++G
Sbjct 187 EKALQIALNSNFVEVLGVHCHIGSQIFDTTGFVLAARKIFEKLKEWKDRLSYEPKVLNLG 246
Query 237 GGLGVCYKDETPP-----SVAEYANALKPALEKLGLK---VYMEPGRSISANAGVLLTRV 288
GG G+ Y +E P V E N +K + +K +++EPGRS+ +AG L ++
Sbjct 247 GGFGIRYTEEDDPIPASQYVKEIINEVKKQVSAYSMKMPEIWIEPGRSLVGDAGTTLYQI 306
Query 289 DLLKPT-NHRNFAIIDAAMNDLIRPSLYEAWMDIQSVNESTSAEAKEWDVVGAICETGDF 347
K N R++ +D M+D IRP+LY A + N+ + + + G CE+GD
Sbjct 307 GSRKDVPNVRHYVAVDGGMSDNIRPALYNAKYEAVLANKPLAKADETVSIAGKCCESGDM 366
Query 348 LGKARTL-AIQENDILAVLGAGAYGFVMSSNYNTRGRAAEVMVDDEKPHLIRERESIES 405
L L +DILAV GAYG+ M++NYN R A V V++ + L+ +R+ + +
Sbjct 367 LIWDLPLPKADSDDILAVFCTGAYGYSMANNYNRIPRPAVVFVENGESMLVVKRKHMRT 425
>P23630 Diaminopimelate decarboxylase [Bacillus subtilis (strain
168)]
Length=439
Score = 220 bits (560), Expect = 2e-70
Identities = 139/420 (33%), Positives = 226/420 (54%), Gaps = 17/420 (4%)
Query 4 SRINGVLHAEQCSLDQL--AQQFGTPLYVYSKAAFEKHYKDMDRAFDF--IDHQICFAVK 59
SR N H E +D L A+++GTPLYVY A + K +AF + Q+ +A K
Sbjct 7 SRQNQHGHLEIGGVDALYLAEKYGTPLYVYDVALIRERAKSFKQAFISAGLKAQVAYASK 66
Query 60 SNSNLAVLNVLAKLGSGFDIVTGGELARVLAAGGDPSKIVFSGLGKSEADIQKALEVGIA 119
+ S++A++ + + G D+V+GGEL +AAG +I F G KS +++ ALE I
Sbjct 67 AFSSVAMIQLAEEEGLSLDVVSGGELYTAVAAGFPAERIHFHGNNKSREELRMALEHRIG 126
Query 120 CFNVESYAELDRIQKVAVRLDQKAPVSLRVNPDVDAKTHPYISTGLKENKFG--IPSDTV 177
C V+++ E+ ++ + V LR+ P V+A TH YI+TG +++KFG + +
Sbjct 127 CIVVDNFYEIALLEDLCKETGHSIDVLLRITPGVEAHTHDYITTGQEDSKFGFDLHNGQT 186
Query 178 FETYQYAASLSHLDVVGIDCHIGSQLTETKPFVDALDRVMVMIEQ-LNKLGINLKHIDIG 236
+ H+ ++G+ CHIGSQ+ +T FV A +++ +++ + K +++G
Sbjct 187 ERAIEQVLQSEHIQLLGVHCHIGSQIFDTAGFVLAAEKIFKKLDEWRDSYSFVSKVLNLG 246
Query 237 GGLGVCY-KDETPPSVAEYA----NALKPALEKLGL---KVYMEPGRSISANAGVLLTRV 288
GG G+ Y +D+ P EY A+K + G ++++EPGRS+ +AG L V
Sbjct 247 GGFGIRYTEDDEPLHATEYVEKIIEAVKENASRYGFDIPEIWIEPGRSLVGDAGTTLYTV 306
Query 289 DLLKPT-NHRNFAIIDAAMNDLIRPSLYEAWMDIQSVNESTSAEAKEWDVVGAICETGDF 347
K R + +D MND IRP+LY+A + + N A K + G CE+GD
Sbjct 307 GSQKEVPGVRQYVAVDGGMNDNIRPALYQAKYEAAAANRIGEAHDKTVSIAGKCCESGDM 366
Query 348 LGKARTL-AIQENDILAVLGAGAYGFVMSSNYNTRGRAAEVMVDDEKPHLIRERESIESL 406
L L ++E D+LAV GAYG+ M++NYN R A V V++ + HL+ +RE+ E +
Sbjct 367 LIWDIDLPEVKEGDLLAVFCTGAYGYSMANNYNRIPRPAVVFVENGEAHLVVKRETYEDI 426
>P09890 Diaminopimelate decarboxylase [Corynebacterium glutamicum
(strain ATCC 13032 / DSM 20300 / BCRC 11384 / JCM 1318 /
LMG 3730 / NCIMB 10025)]
Length=445
Score = 186 bits (473), Expect = 1e-57
Identities = 130/422 (31%), Positives = 216/422 (51%), Gaps = 19/422 (5%)
Query 7 NGVLHAEQCSLDQLAQQFGTPLYVYSKAAFEKHYKDMDRAFDFIDHQICFAVKSNSNLAV 66
+GV+ L LA+++GTPL+V + F +DM AF + + +A K+ +
Sbjct 24 DGVVTVAGVPLPDLAEEYGTPLFVVDEDDFRSRCRDMATAFGGPGN-VHYASKAFLTKTI 82
Query 67 LNVLAKLGSGFDIVTGGELARVLAAGGDPSKIVFSGLGKSEADIQKALEVGIACFNVESY 126
+ + G DI + EL LAAG S+I G K ++ ++ G+ ++S
Sbjct 83 ARWVDEEGLALDIASINELGIALAAGFPASRITAHGNNKGVEFLRALVQNGVGHVVLDSA 142
Query 127 AELDRIQKVAVRLDQKAPVSLRVNPDVDAKTHPYISTGLKENKFG--IPSDTVFETYQYA 184
EL+ + VA + V +RV P ++A TH +I+T ++ KFG + S + FE + A
Sbjct 143 QELELLDYVAAGEGKIQDVLIRVKPGIEAHTHEFIATSHEDQKFGFSLASGSAFEAAKAA 202
Query 185 ASLSHLDVVGIDCHIGSQLTETKPFVDALDRVMVMIEQL-NKLGINLKHIDIGGGLGVCY 243
+ +L++VG+ CH+GSQ+ + + F A +RV+ + Q+ ++LG+ L +D+GGG G+ Y
Sbjct 203 NNAENLNLVGLHCHVGSQVFDAEGFKLAAERVLGLYSQIHSELGVALPELDLGGGYGIAY 262
Query 244 -KDETPPSVAEYANALKPALEKLGLK-------VYMEPGRSISANAGVLLTRVDLLKPTN 295
E P +VAE A+ L A+ K+ + V +EPGR+I+ + V + V K +
Sbjct 263 TAAEEPLNVAEVASDLLTAVGKMAAELGIDAPTVLVEPGRAIAGPSTVTIYEVGTTKDVH 322
Query 296 -----HRNFAIIDAAMNDLIRPSLYEAWMDIQSVNESTSAEAKEWDVVGAICETGDFL-- 348
R + +D M+D IRP+LY + D + V+ + +VG+ CE+GD L
Sbjct 323 VDDDKTRRYIAVDGGMSDNIRPALYGSEYDARVVSRFAEGDPVSTRIVGSHCESGDILIN 382
Query 349 GKARTLAIQENDILAVLGAGAYGFVMSSNYNTRGRAAEVMVDDEKPHLIRERESIESLWE 408
+ I D LA+ GAY + MSS YN R A V V L+ RE+++ +
Sbjct 383 DEIYPSDITSGDFLALAATGAYCYAMSSRYNAFTRPAVVSVRAGSSRLMLRRETLDDILS 442
Query 409 RE 410
E
Sbjct 443 LE 444
>P9WIU7 Diaminopimelate decarboxylase [Mycobacterium tuberculosis
(strain ATCC 25618 / H37Rv)]
Length=447
Score = 184 bits (468), Expect = 6e-57
Identities = 132/425 (31%), Positives = 213/425 (50%), Gaps = 23/425 (5%)
Query 8 GVLHAEQCSLDQLAQQFGTPLYVYSKAAFEKHYKDMDRAFDFIDHQICFAVKSNSNLAVL 67
GV+ L QLAQ++GTPL+V + F ++ AF + +A K+ V
Sbjct 22 GVVCIAGIPLTQLAQEYGTPLFVIDEDDFRSRCRETAAAFGS-GANVHYAAKAFLCSEVA 80
Query 68 NVLAKLGSGFDIVTGGELARVLAAGGDPSKIVFSGLGKSEADIQKALEVGIACFNVESYA 127
+++ G D+ TGGELA L A P +I G KS +++ A++ G+ V+S
Sbjct 81 RWISEEGLCLDVCTGGELAVALHASFPPERITLHGNNKSVSELTAAVKAGVGHIVVDSMT 140
Query 128 ELDRIQKVAVRLDQKAPVSLRVNPDVDAKTHPYISTGLKENKFG--IPSDTVFETYQYAA 185
E++R+ +A V +R+ V+A TH +IST ++ KFG + S +
Sbjct 141 EIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHEDQKFGLSVASGAAMAAVRRVF 200
Query 186 SLSHLDVVGIDCHIGSQLTETKPFVDALDRVMVMI-EQLNKLG----INLKHIDIGGGLG 240
+ HL +VG+ HIGSQ+ + F A RV+ ++ + + + G + +D+GGGLG
Sbjct 201 ATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVGEFGPEKTAQIATVDLGGGLG 260
Query 241 VCY-KDETPPSVAEYANALKPALE----KLGL---KVYMEPGRSISANAGVLLTRVDLLK 292
+ Y + PP +AE A L + +GL K+ +EPGR+I+ + L V +K
Sbjct 261 ISYLPSDDPPPIAELAAKLGTIVSDESTAVGLPTPKLVVEPGRAIAGPGTITLYEVGTVK 320
Query 293 -----PTNHRNFAIIDAAMNDLIRPSLYEAWMDIQSVNESTSAEAKEWDVVGAICETGDF 347
T HR + +D M+D IR +LY A D++ V+ + A +VG CE+GD
Sbjct 321 DVDVSATAHRRYVSVDGGMSDNIRTALYGAQYDVRLVSRVSDAPPVPARLVGKHCESGDI 380
Query 348 LGKARTLA--IQENDILAVLGAGAYGFVMSSNYNTRGRAAEVMVDDEKPHLIRERESIES 405
+ + + I+ D++AV GAY + +SS YN GR A V V L+ RE+++
Sbjct 381 IVRDTWVPDDIRPGDLVAVAATGAYCYSLSSRYNMVGRPAVVAVHAGNARLVLRRETVDD 440
Query 406 LWERE 410
L E
Sbjct 441 LLSLE 445
Lambda K H a alpha
0.319 0.136 0.393 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 2472510
Database: 7ce6fbbece93b17563bdf821cf054f22.SwissProt.fasta
Posted date: May 19, 2024 12:47 AM
Number of letters in database: 7,710
Number of sequences in database: 18
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
