BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: f74df727ada92976867ac4b1da5e1672.SwissProt.fasta
1 sequences; 1,026 total letters
Query= ACIAD2709
Length=66
Score E
Sequences producing significant alignments: (Bits) Value
Q0RD23 UPF0182 protein FRAAL6027 [Frankia alni (strain DSM 45986 ... 30.8 3e-06
>Q0RD23 UPF0182 protein FRAAL6027 [Frankia alni (strain DSM 45986
/ CECT 9034 / ACN14a)]
Length=1026
Score = 30.8 bits (68), Expect = 3e-06
Identities = 21/66 (32%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query 1 LIGEYNADGVPLVKYICLGDKPV-AATYGAGTTAKTYWITTD-AQNTPRRLINAADGTTT 58
L G +DG P LGD + T +G A+ + +N+ + ++A DGT T
Sbjct 584 LDGYTTSDGYPYSARRTLGDVTADSVTAQSGNRARQAANQVNYIRNSVKATVDAYDGTVT 643
Query 59 VWAWDE 64
++AWDE
Sbjct 644 LYAWDE 649
Lambda K H a alpha
0.323 0.137 0.459 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 43129
Database: f74df727ada92976867ac4b1da5e1672.SwissProt.fasta
Posted date: May 9, 2024 3:26 AM
Number of letters in database: 1,026
Number of sequences in database: 1
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
Loading
Data ...
