BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: d1ce4f6dd1f23052ba3e820178cf699b.SwissProt.fasta
2 sequences; 571 total letters
Query= ACIAD2712
Length=97
Score E
Sequences producing significant alignments: (Bits) Value
Q8K999 Uncharacterized transporter BUsg_450 [Buchnera aphidicola ... 33.5 5e-07
Q57719 Uncharacterized protein MJ0271 [Methanocaldococcus jannasc... 31.6 2e-06
>Q8K999 Uncharacterized transporter BUsg_450 [Buchnera aphidicola
subsp. Schizaphis graminum (strain Sg)]
Length=391
Score = 33.5 bits (75), Expect = 5e-07
Identities = 16/49 (33%), Positives = 27/49 (55%), Gaps = 7/49 (14%)
Query 7 ITFLFFLILLICAYTKYHYLYYNIVNLNMYEKEGLVTITFISILVFLFT 55
I F FF + LI Y K+H+ NI+ + ++ F+S+L+FL +
Sbjct 257 IVFSFFFLFLIVFYFKFHFFLKNIIEICIF-------FIFLSLLLFLLS 298
Score = 21.2 bits (43), Expect = 0.009
Identities = 24/99 (24%), Positives = 42/99 (42%), Gaps = 17/99 (17%)
Query 4 LFNITFLFFLILLICAYT--------KYHYLYYNIVNLNMYEKEGLVTITFISILVFLFT 55
+F + FL + LI Y YH++ Y + + F+ ++VF F
Sbjct 221 VFLLHFLLTMNFLIIPYEFELSGLALHYHWIVYFATIV--------FSFFFLFLIVFYFK 272
Query 56 IPFFLLTNKEGNLKKIKIILYIVYLITMSSFIYLYFPKQ 94
FFL E + I + L +++L++ + I L F Q
Sbjct 273 FHFFLKNIIEICIFFIFLSL-LLFLLSQHNLICLTFALQ 310
Score = 20.8 bits (42), Expect = 0.013
Identities = 16/52 (31%), Positives = 24/52 (46%), Gaps = 5/52 (10%)
Query 45 TFISILVFLFTIPFF---LLTNKEGNL--KKIKIILYIVYLITMSSFIYLYF 91
+ SIL+ F IP +L N + N+ KKIK I ++ L+F
Sbjct 175 SIFSILIVFFLIPSSQNEILKNYKKNIYQKKIKFIFNKIFFRFYLGVFLLHF 226
Score = 20.4 bits (41), Expect = 0.017
Identities = 9/28 (32%), Positives = 18/28 (64%), Gaps = 0/28 (0%)
Query 53 LFTIPFFLLTNKEGNLKKIKIILYIVYL 80
+F IPF +L+++ G + I L+I ++
Sbjct 63 VFQIPFGILSDRFGRKQIIIFGLFIFFI 90
Score = 17.3 bits (33), Expect = 0.20
Identities = 6/11 (55%), Positives = 9/11 (82%), Gaps = 0/11 (0%)
Query 4 LFNITFLFFLI 14
+F+I +FFLI
Sbjct 176 IFSILIVFFLI 186
Score = 15.0 bits (27), Expect = 1.2
Identities = 7/17 (41%), Positives = 10/17 (59%), Gaps = 0/17 (0%)
Query 40 GLVTITFISILVFLFTI 56
GL+ F + +FLF I
Sbjct 360 GLLCTFFNTNHIFLFEI 376
Score = 15.0 bits (27), Expect = 1.2
Identities = 4/10 (40%), Positives = 9/10 (90%), Gaps = 0/10 (0%)
Query 46 FISILVFLFT 55
FI+++ F+F+
Sbjct 377 FITLIWFIFS 386
Score = 14.6 bits (26), Expect = 1.6
Identities = 5/8 (63%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
Query 5 FNITFLFF 12
FNI +FF
Sbjct 316 FNILEIFF 323
>Q57719 Uncharacterized protein MJ0271 [Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 /
NBRC 100440)]
Length=180
Score = 31.6 bits (70), Expect = 2e-06
Identities = 24/84 (29%), Positives = 41/84 (49%), Gaps = 2/84 (2%)
Query 10 LFFLILLICAYTKYHYLYYNIVNLNMYEKEGLVTITFISILVFLFTIPFFLLT--NKEGN 67
+ LI++ + KY ++ + K+ +T ISI L TI FLL +KE
Sbjct 91 ILILIVMGILFPKYKLIFEVFDEFVEHLKQKSGFLTLISIFGMLLTIYVFLLILPSKEFC 150
Query 68 LKKIKIILYIVYLITMSSFIYLYF 91
+ + II I+ +IT + FI ++
Sbjct 151 INAVDIIRTIMLVITANMFIIEFY 174
Score = 15.0 bits (27), Expect = 1.1
Identities = 9/38 (24%), Positives = 19/38 (50%), Gaps = 7/38 (18%)
Query 26 LYYNIVNLNMYEKEGLVTI-------TFISILVFLFTI 56
LY N++ +++ EG++ F+ I + +F I
Sbjct 54 LYENLLAMSVGFIEGILIFLGIIYNEVFLDITLGIFAI 91
Lambda K H a alpha
0.344 0.158 0.481 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 39525
Database: d1ce4f6dd1f23052ba3e820178cf699b.SwissProt.fasta
Posted date: May 8, 2024 12:50 PM
Number of letters in database: 571
Number of sequences in database: 2
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
