BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 46402a3e1d5a68341ae751e79129773b.SwissProt.fasta
6 sequences; 1,395 total letters
Query= ACIAD2766
Length=276
Score E
Sequences producing significant alignments: (Bits) Value
Q56064 Enterobactin synthase component D [Salmonella typhimurium ... 61.6 4e-15
Q8Z8L9 Enterobactin synthase component D [Salmonella typhi] 57.0 1e-13
Q53636 Enterobactin synthase component D [Salmonella austin] 55.8 4e-13
Q9F0Q6 4'-phosphopantetheinyl transferase Svp [Streptomyces mobar... 50.1 4e-11
O33336 4'-phosphopantetheinyl transferase PptT [Mycobacterium tub... 42.4 1e-08
A1YCA5 4'-phosphopantetheinyl transferase Npt [Nocardia iowensis] 39.3 1e-07
>Q56064 Enterobactin synthase component D [Salmonella typhimurium
(strain LT2 / SGSC1412 / ATCC 700720)]
Length=234
Score = 61.6 bits (148), Expect = 4e-15
Identities = 56/182 (31%), Positives = 88/182 (48%), Gaps = 42/182 (23%)
Query 39 HQINLLDIDAQKIYNLYNKYNI-FLPKH--VTKASIKRKCEFFLGRLAAKYALNDLGNYS 95
H+++++D DA + ++++ +LP H + A KRK E GR+AA +AL ++G +
Sbjct 13 HRLHIVDFDASS----FREHDLLWLPHHDRLRSAGRKRKAEHLAGRIAAVHALREVGVRT 68
Query 96 SFIIERGKQGEPLWPDQITGSISHSMLDCTQGIAIAATSRLSKNMNDLKELSKIYNQTAS 155
+ G + +PLWPD + GSISH AT+ L A
Sbjct 69 --VPGMGDKRQPLWPDGLFGSISH-----------CATTAL-----------------AV 98
Query 156 LSGQFLGIDIE-IKKNSEIFDRNPSILTNIFSSQEIKLISPFLKQRPVLHLIIFSAKESL 214
+S Q +GIDIE I + PSI+ S E +++ L P+ + FSAKES+
Sbjct 99 ISRQRIGIDIEKIMSQHTATELAPSII----DSDERQILQASLLPFPLALTLAFSAKESV 154
Query 215 IK 216
K
Sbjct 155 YK 156
>Q8Z8L9 Enterobactin synthase component D [Salmonella typhi]
Length=234
Score = 57.0 bits (136), Expect = 1e-13
Identities = 53/181 (29%), Positives = 85/181 (47%), Gaps = 40/181 (22%)
Query 39 HQINLLDIDAQKIYNLYNKYNIFLPKH--VTKASIKRKCEFFLGRLAAKYALNDLGNYSS 96
H+++++D DA + + ++LP H + A KRK E GR+AA +AL ++G +
Sbjct 13 HRLHIVDFDAS---SFHEHDLLWLPHHDRLRSAGRKRKAEHLAGRIAAVHALREVGVRA- 68
Query 97 FIIERGKQGEPLWPDQITGSISHSMLDCTQGIAIAATSRLSKNMNDLKELSKIYNQTASL 156
+ G + +PLWPD + GSISH A+T+ A +
Sbjct 69 -VPGIGDKRQPLWPDGLFGSISH----------CASTA------------------LAVI 99
Query 157 SGQFLGIDIE-IKKNSEIFDRNPSILTNIFSSQEIKLISPFLKQRPVLHLIIFSAKESLI 215
S Q +G+DIE I + PSI+ S E +++ P+ + FSAKES+
Sbjct 100 SRQRVGVDIEKIMSQHTATELAPSII----DSDERQILQASSLPFPLALTLAFSAKESVY 155
Query 216 K 216
K
Sbjct 156 K 156
>Q53636 Enterobactin synthase component D [Salmonella austin]
Length=232
Score = 55.8 bits (133), Expect = 4e-13
Identities = 51/180 (28%), Positives = 82/180 (46%), Gaps = 40/180 (22%)
Query 39 HQINLLDIDAQKIYNLYNKYNIFLPKH--VTKASIKRKCEFFLGRLAAKYALNDLGNYSS 96
H+++++D DA + + ++LP H + A KRK E GR+AA +AL ++S
Sbjct 13 HRLHIVDFDAS---SFHEHDLLWLPHHDRLRSAGRKRKAEHLAGRIAAVHALR---RWAS 66
Query 97 FIIERGKQGEPLWPDQITGSISHSMLDCTQGIAIAATSRLSKNMNDLKELSKIYNQTASL 156
+ G + +PLWPD + GSISH A+T+ A +
Sbjct 67 GVPGIGDKRQPLWPDDLFGSISH----------CASTA------------------LAVI 98
Query 157 SGQFLGIDIEIKKNSEIFDRNPSILTNIFSSQEIKLISPFLKQRPVLHLIIFSAKESLIK 216
S Q +G+DIE + + L I S E +++ P+ + FSAKES+ K
Sbjct 99 SRQRVGVDIE----KIMSQHTATELAVIIDSDEPQILQASSLPFPLALTLAFSAKESVYK 154
>Q9F0Q6 4'-phosphopantetheinyl transferase Svp [Streptomyces mobaraensis]
Length=246
Score = 50.1 bits (118), Expect = 4e-11
Identities = 49/167 (29%), Positives = 73/167 (44%), Gaps = 32/167 (19%)
Query 65 HVTKASIKRKCEFFLGRLAAKYALNDLGNYSSFIIERGKQGEPLWPDQITGSISHSMLDC 124
HV +A KR EF R+ A+ AL LG ++ G++G P WPD + GS++H
Sbjct 34 HVARAVPKRLHEFATVRVCARAALGRLGLPPGPLLP-GRRGAPSWPDGVVGSMTH----- 87
Query 125 TQGIAIAATSRLSKNMNDLKELSKIYNQTASLSGQFLGIDIEIKKNSEIFDRNPSILTNI 184
QG AA +R + LGID E N + D +L +
Sbjct 88 CQGFRGAAVAR-------------------AADAASLGIDAE--PNGPLPD---GVLAMV 123
Query 185 FSSQEIKLISPFLKQRPVLH--LIIFSAKESLIKVVYNKYKKIISFD 229
E + ++ +RP +H ++FSAKES+ K Y + FD
Sbjct 124 SLPSEREWLAGLAARRPDVHWDRLLFSAKESVFKAWYPLTGLELDFD 170
>O33336 4'-phosphopantetheinyl transferase PptT [Mycobacterium
tuberculosis (strain ATCC 25618 / H37Rv)]
Length=227
Score = 42.4 bits (98), Expect = 1e-08
Identities = 21/54 (39%), Positives = 34/54 (63%), Gaps = 1/54 (2%)
Query 66 VTKASIKRKCEFFLGRLAAKYALNDLGNYSSFIIERGKQGEPLWPDQITGSISH 119
+ ++ KR+ EF R A+ AL+ LG + I+ +G +GEP WPD + GS++H
Sbjct 41 IARSVAKRRNEFITVRHCARIALDQLGVPPAPIL-KGDKGEPCWPDGMVGSLTH 93
>A1YCA5 4'-phosphopantetheinyl transferase Npt [Nocardia iowensis]
Length=222
Score = 39.3 bits (90), Expect = 1e-07
Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 1/54 (2%)
Query 66 VTKASIKRKCEFFLGRLAAKYALNDLGNYSSFIIERGKQGEPLWPDQITGSISH 119
+ K+ KR+ +F R A+ AL +LG I +G++G P+WP + GS++H
Sbjct 32 IAKSVEKRRRDFIGARHCARLALAELGE-PPVAIGKGERGAPIWPRGVVGSLTH 84
Lambda K H a alpha
0.324 0.139 0.403 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 282960
Database: 46402a3e1d5a68341ae751e79129773b.SwissProt.fasta
Posted date: May 30, 2024 4:05 AM
Number of letters in database: 1,395
Number of sequences in database: 6
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
