BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: b2b9677fd96f7548a77755c781c5912f.SwissProt.fasta
           8 sequences; 2,310 total letters



Query= ACIAD2779

Length=72
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

P0CF82 Transposase InsF for insertion sequence IS3D [Escherichia ...  57.0    3e-15
P0CF81 Transposase InsF for insertion sequence IS3C [Escherichia ...  57.0    3e-15
P0CF80 Transposase InsF for insertion sequence IS3B [Escherichia ...  57.0    3e-15
P0CF85 Transposase InsF for insertion sequence IS3 [Escherichia c...  57.0    3e-15
P0CF79 Transposase InsF for insertion sequence IS3A [Escherichia ...  57.0    3e-15
Q9JMT3 Transposase InsF for insertion sequence IS3fB [Escherichia...  56.2    6e-15
P16940 Insertion element IS600 uncharacterized 31 kDa protein [Sh...  51.2    4e-13
Q06715 ATP-dependent protease [Lactococcus lactis subsp. lactis]      46.6    2e-11


>P0CF82 Transposase InsF for insertion sequence IS3D [Escherichia 
coli (strain K12)]
Length=288

 Score = 57.0 bits (136),  Expect = 3e-15
 Identities = 29/55 (53%), Positives = 35/55 (64%), Gaps = 0/55 (0%)

Query  3    ENFFHTLKGHVVHGSVFTTRKEANAILFEYIEVYYNRIRRHSANDWLSPEAFELK  57
            E+FFH+LK   +HG  F +R+   A +F YIE  YNR RRHS    LSPE FE K
Sbjct  231  ESFFHSLKVECIHGEHFISREIMRATVFNYIECDYNRWRRHSWCGGLSPEQFENK  285


>P0CF81 Transposase InsF for insertion sequence IS3C [Escherichia 
coli (strain K12)]
Length=288

 Score = 57.0 bits (136),  Expect = 3e-15
 Identities = 29/55 (53%), Positives = 35/55 (64%), Gaps = 0/55 (0%)

Query  3    ENFFHTLKGHVVHGSVFTTRKEANAILFEYIEVYYNRIRRHSANDWLSPEAFELK  57
            E+FFH+LK   +HG  F +R+   A +F YIE  YNR RRHS    LSPE FE K
Sbjct  231  ESFFHSLKVECIHGEHFISREIMRATVFNYIECDYNRWRRHSWCGGLSPEQFENK  285


>P0CF80 Transposase InsF for insertion sequence IS3B [Escherichia 
coli (strain K12)]
Length=288

 Score = 57.0 bits (136),  Expect = 3e-15
 Identities = 29/55 (53%), Positives = 35/55 (64%), Gaps = 0/55 (0%)

Query  3    ENFFHTLKGHVVHGSVFTTRKEANAILFEYIEVYYNRIRRHSANDWLSPEAFELK  57
            E+FFH+LK   +HG  F +R+   A +F YIE  YNR RRHS    LSPE FE K
Sbjct  231  ESFFHSLKVECIHGEHFISREIMRATVFNYIECDYNRWRRHSWCGGLSPEQFENK  285


>P0CF85 Transposase InsF for insertion sequence IS3 [Escherichia 
coli O111:H-]
Length=288

 Score = 57.0 bits (136),  Expect = 3e-15
 Identities = 29/55 (53%), Positives = 35/55 (64%), Gaps = 0/55 (0%)

Query  3    ENFFHTLKGHVVHGSVFTTRKEANAILFEYIEVYYNRIRRHSANDWLSPEAFELK  57
            E+FFH+LK   +HG  F +R+   A +F YIE  YNR RRHS    LSPE FE K
Sbjct  231  ESFFHSLKVECIHGEHFISREIMRATVFNYIECDYNRWRRHSWCGGLSPEQFENK  285


>P0CF79 Transposase InsF for insertion sequence IS3A [Escherichia 
coli (strain K12)]
Length=288

 Score = 57.0 bits (136),  Expect = 3e-15
 Identities = 29/55 (53%), Positives = 35/55 (64%), Gaps = 0/55 (0%)

Query  3    ENFFHTLKGHVVHGSVFTTRKEANAILFEYIEVYYNRIRRHSANDWLSPEAFELK  57
            E+FFH+LK   +HG  F +R+   A +F YIE  YNR RRHS    LSPE FE K
Sbjct  231  ESFFHSLKVECIHGEHFISREIMRATVFNYIECDYNRWRRHSWCGGLSPEQFENK  285


>Q9JMT3 Transposase InsF for insertion sequence IS3fB [Escherichia 
coli (strain K12)]
Length=288

 Score = 56.2 bits (134),  Expect = 6e-15
 Identities = 28/53 (53%), Positives = 34/53 (64%), Gaps = 0/53 (0%)

Query  3    ENFFHTLKGHVVHGSVFTTRKEANAILFEYIEVYYNRIRRHSANDWLSPEAFE  55
            E+FFH+LK   +HG  F +R+   A +F YIE  YNR RRHS    LSPE FE
Sbjct  231  ESFFHSLKVECIHGEHFISREIMRATVFNYIECDYNRWRRHSWCGGLSPEQFE  283


>P16940 Insertion element IS600 uncharacterized 31 kDa protein 
[Shigella sonnei]
Length=272

 Score = 51.2 bits (121),  Expect = 4e-13
 Identities = 26/56 (46%), Positives = 35/56 (63%), Gaps = 0/56 (0%)

Query  3    ENFFHTLKGHVVHGSVFTTRKEANAILFEYIEVYYNRIRRHSANDWLSPEAFELKY  58
            E+F+ TLK   +    F  R EA +++ EYIE++YNR RRHS    +SP AF  KY
Sbjct  212  ESFWGTLKNESLSHYRFNNRDEAISVIREYIEIFYNRQRRHSRLGNISPAAFREKY  267


>Q06715 ATP-dependent protease [Lactococcus lactis subsp. lactis]
Length=310

 Score = 46.6 bits (109),  Expect = 2e-11
 Identities = 24/59 (41%), Positives = 32/59 (54%), Gaps = 0/59 (0%)

Query  1    VTENFFHTLKGHVVHGSVFTTRKEANAILFEYIEVYYNRIRRHSANDWLSPEAFELKYF  59
            VTE FF  LK   ++   + + +E     FEYIE +YN    HSAN+ L+P   E  YF
Sbjct  128  VTEVFFKYLKQREINRRTYHSIQEVQLSCFEYIEQFYNNYNPHSANNGLTPNQKEENYF  186


 Score = 20.0 bits (40),  Expect = 0.052
 Identities = 10/39 (26%), Positives = 16/39 (41%), Gaps = 0/39 (0%)

Query  19  FTTRKEANAILFEYIEVYYNRIRRHSANDWLSPEAFELK  57
           F  + +   I F   E  YN+++       LSP  +  K
Sbjct  30  FKFKNQTKYIQFRLSEEQYNKLKISGETYGLSPNLYAKK  68



Lambda      K        H        a         alpha
   0.331    0.143    0.444    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 91784


  Database: b2b9677fd96f7548a77755c781c5912f.SwissProt.fasta
    Posted date:  May 9, 2024  7:30 AM
  Number of letters in database: 2,310
  Number of sequences in database:  8



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40